RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNNT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105048

Ensembl transcript IDs: ENST00000291901.12, ENST00000356783.9, ENST00000536926.5, ENST00000585321.6, ENST00000586282.1, ENST00000586649.2, ENST00000587089.6, ENST00000587465.6, ENST00000587758.5, ENST00000588147.5, ENST00000588426.5, ENST00000588981.6, ENST00000589226.5, ENST00000589745.5, ENST00000592920.5, ENST00000593046.5, ENST00000593194.5

Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAACCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATaGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCG +
Preference number: 1 (lower is better)
Translates to: EPSGCLRGAFISSYR*DKHSQASQVPLSGA
Trigger: CGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
3UTR GCA 90 bp CCCCCATGTAGTCAATGTCCAGAGGCTTCTTACGCTCGGAGAGGATaGGCACCTTCATCTCCCGCCCCGTCTGCCGCTTACCACGCTTCT +
Preference number: 1 (lower is better)
Translates to: PPCSQCPEASYARRG*APSSPAPSAAYHAS
Trigger: AGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTAAGAAGCCTCTGGACATTGACTACATGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR GCA 90 bp GCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACAGCCCAGGCTTCCCAGGTaGCACTGTCCGGGGCGGCAT +
Preference number: 2 (lower is better)
Translates to: ALPCPLPELLGVADAVVQPRLPR*HCPGRH
Trigger: ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGG...CTGTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR GCA 90 bp CGGCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACATCTCCCGCCCCGTCTaGCGCTTACCACGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: RPFPAPFRNFWAWLMRLYISRPV*RLPRFC
Trigger: ACAGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGAT...GTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR GCA 90 bp CGGCATCCTCACTTCCAGCGGCCTCCAACGCGGCCCTTCCCTGCCCCCTTCCGGACATCGATGAGTGTCTaGAGCTCCAGCAGGTCTTTC +
Preference number: 2 (lower is better)
Translates to: RHPHFQRPPTRPFPAPFRTSMSV*SSSRSF
Trigger: GAAAGACCTGCTGGAGCTGCAGACACTCATCGATGT...CCGGAAGGGGGCAGGGAAGGGCCGCGTTGGAGGCCGCTGGAAGTGAGGATGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR GCA 90 bp GCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACAGGTTCTGAAGCGCTGTTaGTCGGCTCTCTCTGACCGG +
Preference number: 2 (lower is better)
Translates to: ALPCPLPELLGVADAVVQVLKRC*SALSDR
Trigger: CCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAAC...CTGTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR CCA 90 bp CGGCATCCTCACTTCCAGCGGCCTCCAACGCGGCCCTTCCCTGCCCCCTTCCGGAATGGGCCCCCATGTTaGACAGCACCTTCTTTTTCT +
Preference number: 2 (lower is better)
Translates to: RHPHFQRPPTRPFPAPFRNGPPC*TAPSFS
Trigger: AGAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATT...CCGGAAGGGGGCAGGGAAGGGCCGCGTTGGAGGCCGCTGGAAGTGAGGATGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR TCA 90 bp GCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACAGGTTCCTTCTCAGTTCTaGAGCGCTGTTGCTCGGCTC +
Preference number: 2 (lower is better)
Translates to: ALPCPLPELLGVADAVVQVPSQF*SAVARL
Trigger: GAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAAC...CTGTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR TCA 90 bp TCTTACGCTCGGAGAGGATGCGCACCTTCATCTCCCGCCCCGTCTGCCGCTTACTCCGCCAGCTTAGCCTaGCGTTCGCGTTCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: SYARRGCAPSSPAPSAAYSASLA*RSRSFS
Trigger: TGAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGA...GTAAGCGGCAGACGGGGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR CCA 90 bp ATGTCCAGAGGCTTCTTACGCTCGGAGAGGATGCGCACCTTCATCTCCCGCCCCGCACCTTCTTTTTCTTaGCATCATCCTCTGCCCGCT +
Preference number: 2 (lower is better)
Translates to: MSRGFLRSERMRTFISRPAPSFS*HHPLPA
Trigger: AGCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGC...GGGGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTAAGAAGCCTCTGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR CCA 90 bp CTTCTGTTCTGCCTTGACCAGGTAGCCGCCAAAATGGGCCCCCATGTTGGACAGTCCATGCGCTTGCGGTaGATGTCATCGAAGTCAACG +
Preference number: 2 (lower is better)
Translates to: LLFCLDQVAAKMGPHVGQSMRLR*MSSKST
Trigger: CGTTGACTTCGATGACATCCACCGCAAGCGCATGGA...CTGTCCAACATGGGGGCCCATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR GCA 90 bp CTTCTGTTCTGCCTTGACCAGGTAGCCGCCAAAATGGGCCCCCATGTTGGACAGCTTTCTCCATGCGCTTaGGGTGGATGTCATCGAAGT +
Preference number: 2 (lower is better)
Translates to: LLFCLDQVAAKMGPHVGQLSPCA*GGCHRS
Trigger: ACTTCGATGACATCCACCGCAAGCGCATGGAGAAAG...CTGTCCAACATGGGGGCCCATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR TCA 90 bp CATGTAGTCAATGTCCAGAGGCTTCTTACGCTCGGAGAGGATGCGCACCTTCATGCTTCTGTTCTGCCTTaGCCAGGTAGCCGCCAAAAT +
Preference number: 2 (lower is better)
Translates to: HVVNVQRLLTLGEDAHLHASVLP*PGSRQN
Trigger: ATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAGC...ATGAAGGTGCGCATCCTCTCCGAGCGTAAGAAGCCTCTGGACATTGACTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR TCA 90 bp CATGTAGTCAATGTCCAGAGGCTTCTTACGCTCGGAGAGGATGCGCACCTTCATCGAAATGTACATCGATaGGTGTCTGCAGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: HVVNVQRLLTLGEDAHLHRNVHR*VSAAPA
Trigger: TGCTGGAGCTGCAGACACTCATCGATGTACATTTCG...ATGAAGGTGCGCATCCTCTCCGAGCGTAAGAAGCCTCTGGACATTGACTACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR GCA 90 bp CTGTTCCTCCCCCATGTAGTCAATGTCCAGAGGCTTCTTACGCTCGGAGAGGATTCCTCCTTCTTCCGCTaGTCGAAATGTACATCGATG +
Preference number: 2 (lower is better)
Translates to: LFLPHVVNVQRLLTLGEDSSFFR*SKCTSM
Trigger: CATCGATGTACATTTCGAGCAGCGGAAGAAGGAGGA...ATCCTCTCCGAGCGTAAGAAGCCTCTGGACATTGACTACATGGGGGAGGAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR GCA 72 bp TCGGAGAGGATGCGCACCTTCATCTCCCGCCCCGTCTaGCGCTTACCACGCTTCTGTTCTGCCTTGACCAGG +
Preference number: 3 (lower is better)
Translates to: SERMRTFISRPV*RLPRFCSALTR
Trigger: CCTGGTCAAGGCAGAACAGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGATGAAGGTGCGCATCCTCTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR TCA 72 bp CTTCTCAGTTCTGAAGCGCTGTTGCTCGGCTCTCTCTaGCCGGCGCCGCTCAATGCGCTCCTTCAAGGCAAC +
Preference number: 3 (lower is better)
Translates to: LLSSEALLLGSL*PAPLNALLQGN
Trigger: GTTGCCTTGAAGGAGCGCATTGAGCGGCGCCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAACTGAGAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR GCA 72 bp AGTCAATGTCCAGAGGCTTCTTACGCTCGGAGAGGATaGGCACCTTCATCTCCCGCCCCGTCTGCCGCTTAC +
Preference number: 3 (lower is better)
Translates to: SQCPEASYARRG*APSSPAPSAAY
Trigger: GTAAGCGGCAGACGGGGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTAAGAAGCCTCTGGACATTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR CCA 72 bp CGGCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTaGCTGATGCGGTTGTACAGCACGTTGATCTCATAT +
Preference number: 3 (lower is better)
Translates to: RPFPAPFRNFWA*LMRLYSTLISY
Trigger: ATATGAGATCAACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR-3UTR CAA 90 bp GCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACAGAAATGGGCCCCCATGTaGGACAGCACCTTCTTTTTC +
Preference number: 3 (lower is better)
Translates to: ALPCPLPELLGVADAVVQKWAPM*DSTFFF
Trigger: GAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATTT...CTGTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR CCA 72 bp GGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATaGGACAAACACTCCCAGGCTTCCCAGGTGCCACTG +
Preference number: 3 (lower is better)
Translates to: GCLRGAFISSYR*DKHSQASQVPL
Trigger: CAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
3UTR TCA 72 bp TCAACCATAATAACATCAGAGAACCCAGCGGGTGTCTaGGGGGAGCGTTTATTTCAAGCTACCGATGGGACA +
Preference number: 3 (lower is better)
Translates to: STIITSENPAGV*GERLFQATDGT
Trigger: TGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTCTCTGATGTTATTATGGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR CCA 90 bp GTCCGGGGCGGCATCCTCACTTCCAGCGGCCTCCAACGCGGCCCTTCCCTGCCCCCCTTCCGGAACTTCTaGGCGTGGCTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: VRGGILTSSGLQRGPSLPPFRNF*AWLMRL
Trigger: CAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGG...GGGCAGGGAAGGGCCGCGTTGGAGGCCGCTGGAAGTGAGGATGCCGCCCCGGAC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCTGGCCTCGGCTGCGATaGGCACGTTCCCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASWPRLR*ARSPWR
Trigger: CCGCCAGGGGGAACGTGCCCATCGCAGCCGAGGCCA...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587465.6
CDS-3UTR CCA 90 bp GTCCGGGGCGGCATCCTCACTTCCAGCGGCCTCCAACGCGGCCCTTCCCTGCCCCAGCTGAGGCGGGCTTaGTTTGGGGCGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VRGGILTSSGLQRGPSLPQLRRA*FGAFLF
Trigger: GAAGAGGAACGCCCCAAACCAAGCCCGCCTCAGCTG...GGGCAGGGAAGGGCCGCGTTGGAGGCCGCTGGAAGTGAGGATGCCGCCCCGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR TCA 90 bp CGGCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACGTGGAGGGTCCCAGCTaGGGCGGGCTTGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RPFPAPFRNFWAWLMRLYVEGPS*GGLGLG
Trigger: CCCCAAACCAAGCCCGCCTCAGCTGGGACCCTCCAC...GTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR GCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCCCCAGGCTTCCCAGGTaGCACTGTCCGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASPRLPR*HCPGRH
Trigger: ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGG...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp TACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATGGGCACGTTCCCCCTaGCGGTGCAGGGATGGCGCG +
Preference number: 4 (lower is better)
Translates to: YRWDKHSQASQVPLSGAAWARSP*RCRDGA
Trigger: CGCGCCATCCCTGCACCGCCAGGGGGAACGTGCCCA...TGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587465.6
CDS-3UTR CCA 90 bp AGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGGACGGGGGTCCCTCTaGCCTCGGCTGCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: SYRWDKHSQASQVPLSGAGRGSL*PRLRWA
Trigger: TGCCCATCGCAGCCGAGGCCAGAGGGACCCCCGTCC...CGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587465.6
CDS-3UTR TCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCTTGCTCGGCTCTCTCTaGCCGGCGCCGCTCAATGCG +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASLLGSL*PAPLNA
Trigger: CGCATTGAGCGGCGCCGGTCAGAGAGAGCCGAGCAA...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp AGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGCCCAGGCTTCCCAGGTaGCACTGTCCGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: SYRWDKHSQASQVPLSGAPRLPR*HCPGRH
Trigger: ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGG...CGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CGGCATCCTCACTTCCAGCGGCCTCCAACGCGGCCCTTCCCTGCCCCCTTCCGGCACGGGGCGGCTGAGTaGACAGAAACACAGAGACCA +
Preference number: 4 (lower is better)
Translates to: RHPHFQRPPTRPFPAPFRHGAAE*TETQRP
Trigger: TGGTCTCTGTGTTTCTGTCCACTCAGCCGCCCCGTG...CCGGAAGGGGGCAGGGAAGGGCCGCGTTGGAGGCCGCTGGAAGTGAGGATGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR TCA 90 bp GAGGCTTCTTACGCTCGGAGAGGATGCGCACCTTCATCTCCCGCCCCGTCTGCCTTGCTCGGCTCTCTCTaGCCGGCGCCGCTCAATGCG +
Preference number: 4 (lower is better)
Translates to: EASYARRGCAPSSPAPSALLGSL*PAPLNA
Trigger: CGCATTGAGCGGCGCCGGTCAGAGAGAGCCGAGCAA...GGCAGACGGGGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTAAGAAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR GCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCAACGCGGCCCTTCCCTaGCCCCTTCCGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASNAALP*PLPELL
Trigger: CAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCGCGTT...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp GCTGTTGCTCGGCTCTCTCTGACCGGCGCCGCTCAATGCGCTCCTTCAAGGCAACCCAGGCTTCCCAGGTaGCACTGTCCGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: AVARLSLTGAAQCAPSRQPRLPR*HCPGRH
Trigger: ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGG...TTGCCTTGAAGGAGCGCATTGAGCGGCGCCGGTCAGAGAGAGCCGAGCAACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCCACCACGGGGCGGCTTaGTTTGGGGCGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASHHGAA*FGAFLF
Trigger: GAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTG...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp ACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATGGTTCCAGTCTCTGCTaGACGGGGGTCCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: TDGTNTPRLPRCHCPGRHGSSLC*TGVPLA
Trigger: GGCCAGAGGGACCCCCGTCCAGCAGAGACTGGAACC...ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587465.6
CDS-3UTR GCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCTTCCTCTTCTGGCTCTaGCACCGGCTCCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASFLFWL*HRLRLF
Trigger: GAAGAGCCGGAGCCGGTGGCAGAGCCAGAAGAGGAA...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
CDS-3UTR GCA 90 bp GTCCGGGGCGGCATCCTCACTTCCAGCGGCCTCCAACGCGGCCCTTCCCTGCCCACATCGATGAGTGTCTaGAGCTCCAGCAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: VRGGILTSSGLQRGPSLPTSMSV*SSSRSF
Trigger: GAAAGACCTGCTGGAGCTGCAGACACTCATCGATGT...GGGCAGGGAAGGGCCGCGTTGGAGGCCGCTGGAAGTGAGGATGCCGCCCCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR GCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCACCGGCGCCGCTCAATaGGCTCCTTCAAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASTGAAQ*APSRQP
Trigger: TGGTTGCCTTGAAGGAGCGCATTGAGCGGCGCCGGT...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp CTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCACCGGCGCCGCTCAATaGGCTCCTTCAAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: LPMGQTLPGFPGATVRGGTGAAQ*APSRQP
Trigger: TGGTTGCCTTGAAGGAGCGCATTGAGCGGCGCCGGT...GCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp CGGCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACACCGGCGCCGCTCAATaGGCTCCTTCAAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: RPFPAPFRNFWAWLMRLYTGAAQ*APSRQP
Trigger: TGGTTGCCTTGAAGGAGCGCATTGAGCGGCGCCGGT...GTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR GCA 90 bp AGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGAACGCGGCCCTTCCCTaGCCCCTTCCGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: SYRWDKHSQASQVPLSGANAALP*PLPELL
Trigger: CAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCGCGTT...CGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCCAGTCCGACAGCTCCTaGGCTTTCTCCCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASQSDSS*AFSRSC
Trigger: ACAGCTCCGGGAGAAAGCCCAGGAGCTGTCGGACTG...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCAGTCCGACAGCTCCTaGGCTTTCTCCCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ATDGTNTPRLPRCHCPGRQSDSS*AFSRSC
Trigger: ACAGCTCCGGGAGAAAGCCCAGGAGCTGTCGGACTG...CCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCCCCTTCCGGAACTTCTaGGCGTGGCTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASPFRNF*AWLMRL
Trigger: CAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGG...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCCCTTCCGGAACTTCTaGGCGTGGCTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: ATDGTNTPRLPRCHCPGRPFRNF*AWLMRL
Trigger: CAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGG...CCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCCGGTGTCCGACATCCTaGTGCGGCCTTGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASRCPTS*CGLGRC
Trigger: ACACCTACCAAGGCCGCACCAGGATGTCGGACACCG...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587758.5
CDS-3UTR TCA 90 bp CCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCTCCGCCAGCTTAGCCTaGCGTTCGCGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PMGQTLPGFPGATVRGGISASLA*RSRSFS
Trigger: TGAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGA...GATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCGTTCTGAAGCGCTGTTaGTCGGCTCTCTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASVLKRC*SALSDR
Trigger: CCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAAC...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGCGTTCCCCCTGGCGGTaGAGGGATGGCGCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FKLPMGQTLPGFPGATVRRSPWR*RDGARR
Trigger: TCTCCTCGCGCCATCCCTGCACCGCCAGGGGGAACG...CCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587465.6
CDS-3UTR CCA 90 bp GCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACAGCAGTCCGACAGCTCCTaGGCTTTCTCCCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ALPCPLPELLGVADAVVQQSDSS*AFSRSC
Trigger: ACAGCTCCGGGAGAAAGCCCAGGAGCTGTCGGACTG...CTGTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp CTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCTCAGACTCCAGCTGGTaGATCCAGTCCGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPMGQTLPGFPGATVRGGSDSSW*IQSDSS
Trigger: GGAGCTGTCGGACTGGATCCACCAGCTGGAGTCTGA...GCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCTCAGACTCCAGCTGGTaGATCCAGTCCGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: PMGQTLPGFPGATVRGGISDSSW*IQSDSS
Trigger: GGAGCTGTCGGACTGGATCCACCAGCTGGAGTCTGA...GATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCGGAACTTCTGGGCGTaGCTGATGCGGTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: ATDGTNTPRLPRCHCPGRRNFWA*LMRLYS
Trigger: GCTGTACAACCGCATCAGCCACGCCCAGAAGTTCCG...CCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACAGGAGGCGGGCTTGGTTTaGGGCGTTCCTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ALPCPLPELLGVADAVVQEAGLV*GVPLLA
Trigger: AGCCAGAAGAGGAACGCCCCAAACCAAGCCCGCCTC...CTGTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR TCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCGTTCCTTCTCAGTTCTaGAGCGCTGTTGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASVPSQF*SAVARL
Trigger: GAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAAC...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR TCA 90 bp AGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGTCCGCCAGCTTAGCCTaGCGTTCGCGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SYRWDKHSQASQVPLSGASASLA*RSRSFS
Trigger: TGAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGA...CGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp TACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCGCCAGCTTAGCCTaGCGTTCGCGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: YRWDKHSQASQVPLSGAASASLA*RSRSFS
Trigger: TGAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGA...TGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp TACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCAACTTCTGGGCGTGGCTaGTGCGGTTGTACAGCACGT +
Preference number: 4 (lower is better)
Translates to: YRWDKHSQASQVPLSGAATSGRG*CGCTAR
Trigger: ACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGT...TGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp ACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATACTTCTGGGCGTGGCTaGTGCGGTTGTACAGCACGT +
Preference number: 4 (lower is better)
Translates to: TDGTNTPRLPRCHCPGRHTSGRG*CGCTAR
Trigger: ACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGT...ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp TACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCAGCCTCCTCTTCCGGCTaGTCCTCCTCATATTCCTGC +
Preference number: 4 (lower is better)
Translates to: YRWDKHSQASQVPLSGAAASSSG*SSSYSC
Trigger: GCAGGAATATGAGGAGGAGCAGCCGGAAGAGGAGGC...TGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp AGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGTTCTGAAGCGCTGTTaGTCGGCTCTCTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: SYRWDKHSQASQVPLSGAVLKRC*SALSDR
Trigger: CCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAAC...CGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp CAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGATCTCCCGCCCCGTCTaGCGCTTACCACGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QATDGTNTPRLPRCHCPGISRPV*RLPRFC
Trigger: ACAGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGAT...CCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCTTCTCAGACTCCAGCTaGTGGATCCAGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: LPMGQTLPGFPGATVRGGFSDSS*WIQSDS
Trigger: GCTGTCGGACTGGATCCACCAGCTGGAGTCTGAGAA...GCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp TACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCACGGAACTTCTGGGCGTaGCTGATGCGGTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: YRWDKHSQASQVPLSGAARNFWA*LMRLYS
Trigger: GCTGTACAACCGCATCAGCCACGCCCAGAAGTTCCG...TGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp TTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGTTGCTCGGCTCTCTCTaGCCGGCGCCGCTCAATGCG +
Preference number: 4 (lower is better)
Translates to: FQATDGTNTPRLPRCHCPLLGSL*PAPLNA
Trigger: CGCATTGAGCGGCGCCGGTCAGAGAGAGCCGAGCAA...CGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR TCA 90 bp AAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCTCCGCCAGCTTAGCCTaGCGTTCGCGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KLPMGQTLPGFPGATVRGSASLA*RSRSFS
Trigger: TGAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGA...GCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp CCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCGCTTCTGTTCTGCCTTaGCCAGGTAGCCGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PMGQTLPGFPGATVRGGIASVLP*PGSRQN
Trigger: ATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAGC...GATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp CTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCAACCCAGCGGGTGTCTaGGGGGAGCGTTTATTTCAA +
Preference number: 4 (lower is better)
Translates to: LPMGQTLPGFPGATVRGGNPAGV*GERLFQ
Trigger: TTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTT...GCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp GCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGTCCTCCTCATATTCCTaGTCCTCGGTGTCCGACATC +
Preference number: 4 (lower is better)
Translates to: ATDGTNTPRLPRCHCPGRSSSYS*SSVSDI
Trigger: GATGTCGGACACCGAGGAGCAGGAATATGAGGAGGA...CCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp TCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGTTCCTCTTCTGGCTCTaGCACCGGCTCCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSYRWDKHSQASQVPLSGFLFWL*HRLRLF
Trigger: GAAGAGCCGGAGCCGGTGGCAGAGCCAGAAGAGGAA...CCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
CDS-3UTR GCA 90 bp AAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGTTCTGAAGCGCTGTTaGTCGGCTCTCTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: KLPMGQTLPGFPGATVRGVLKRC*SALSDR
Trigger: CCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAAC...GCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGAACGCGGCCCTTCCCTaGCCCCTTCCGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: FKLPMGQTLPGFPGATVRNAALP*PLPELL
Trigger: CAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCGCGTT...CCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp GGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGCCCAGGCTTCCCAGGTaGCACTGTCCGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: GERLFQATDGTNTPRLPRPRLPR*HCPGRH
Trigger: ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGG...CCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp CAGAGAACCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACCCAGGCTTCCCAGGTaGCACTGTCCGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: QRTQRVSEGSVYFKLPMGPRLPR*HCPGRH
Trigger: ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGG...TCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp CTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCCACTCCTCATATTCCTaGTCCTCGGTGTCCGACATC +
Preference number: 4 (lower is better)
Translates to: LPMGQTLPGFPGATVRGGHSSYS*SSVSDI
Trigger: GATGTCGGACACCGAGGAGCAGGAATATGAGGAGTG...GCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536926.5
CDS-3UTR CCA 90 bp ATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGTTCCTCTTCTaGCTCTGCCACCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ISSYRWDKHSQASQVPLSGAFLF*LCHRLR
Trigger: CCGGAGCCGGTGGCAGAGCCAGAAGAGGAACGCCCC...GGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
CDS-3UTR CCA 90 bp GCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACAGAACGCGCTCCCCTTCTaGGATCTTTGGCGGGATCAA +
Preference number: 4 (lower is better)
Translates to: ALPCPLPELLGVADAVVQNALPF*DLWRDQ
Trigger: TTGATCCCGCCAAAGATCCCAGAAGGGGAGCGCGTT...CTGTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp AGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGAACGCGCTCCCCTTCTaGGATCTTTGGCGGGATCAA +
Preference number: 4 (lower is better)
Translates to: SYRWDKHSQASQVPLSGANALPF*DLWRDQ
Trigger: TTGATCCCGCCAAAGATCCCAGAAGGGGAGCGCGTT...CGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp CGGCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACTCCATGCGCTTGCGGTaGATGTCATCGAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: RPFPAPFRNFWAWLMRLYSMRLR*MSSKST
Trigger: CGTTGACTTCGATGACATCCACCGCAAGCGCATGGA...GTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCTCCATGCGCTTGCGGTaGATGTCATCGAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASSMRLR*MSSKST
Trigger: CGTTGACTTCGATGACATCCACCGCAAGCGCATGGA...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CCA 90 bp TCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGCAGTCCGACAGCTCCTaGGCTTTCTCCCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSYRWDKHSQASQVPLSGQSDSS*AFSRSC
Trigger: ACAGCTCCGGGAGAAAGCCCAGGAGCTGTCGGACTG...CCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CGTTCCTTCTCAGTTCTGAAGCGCTGTTGCTCGGCTCTCTCTGACCGGCGCCGCTCAGACTCCAGCTGGTaGATCCAGTCCGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSFSVLKRCCSALSDRRRSDSSW*IQSDSS
Trigger: GGAGCTGTCGGACTGGATCCACCAGCTGGAGTCTGA...GCGGCGCCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAACG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp CAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGTCAGACTCCAGCTGGTaGATCCAGTCCGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: QATDGTNTPRLPRCHCPGSDSSW*IQSDSS
Trigger: GGAGCTGTCGGACTGGATCCACCAGCTGGAGTCTGA...CCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCGAGCTGGGGGAGGGATaGGGGCGGTGGCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCELGEG*GRWPET
Trigger: GGTCTCTGGCCACCGCCCCCATCCCTCCCCCAGCTC...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587465.6
CDS-3UTR TCA 90 bp ACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATGGCCTAGGCTGTGTCTaGGATGCTGTGAATCTTGAG +
Preference number: 4 (lower is better)
Translates to: TDGTNTPRLPRCHCPGRHGLGCV*DAVNLE
Trigger: CTCAAGATTCACAGCATCTCAGACACAGCCTAGGCC...ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR TCA 90 bp CCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTTGCTCGGCTCTCTCTaGCCGGCGCCGCTCAATGCG +
Preference number: 4 (lower is better)
Translates to: PSGCLRGAFISSYRWDKHLLGSL*PAPLNA
Trigger: CGCATTGAGCGGCGCCGGTCAGAGAGAGCCGAGCAA...GTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
CDS-3UTR TCA 90 bp AAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGTTCCTTCTCAGTTCTaGAGCGCTGTTGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: KLPMGQTLPGFPGATVRGVPSQF*SAVARL
Trigger: GAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAAC...GCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR TCA 90 bp ACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATGCTTCTGTTCTGCCTTaGCCAGGTAGCCGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: TDGTNTPRLPRCHCPGRHASVLP*PGSRQN
Trigger: ATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAGC...ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp TCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGACTTCTGGGCGTGGCTaGTGCGGTTGTACAGCACGT +
Preference number: 4 (lower is better)
Translates to: SSYRWDKHSQASQVPLSGTSGRG*CGCTAR
Trigger: ACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGT...CCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp CTCCTCTTCCTCCTTCTTCCGCTGCTCGAAATGTACATCGATGAGTGTCTGCAGGCCCCGGGAGGCTCCTaGACGTGGAGGGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLFLLLPLLEMYIDECLQAPGGS*TWRVPA
Trigger: AGCTGGGACCCTCCACGTTCAGGAGCCTCCCGGGGC...CTGCAGACACTCATCGATGTACATTTCGAGCAGCGGAAGAAGGAGGAAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR GCA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCACATCGATGAGTGTCTaGAGCTCCAGCAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RWDKHSQASQVPLSGAASTSMSV*SSSRSF
Trigger: GAAAGACCTGCTGGAGCTGCAGACACTCATCGATGT...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGTACGCTCGGAGAGGATaGGCACCTTCATCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: FKLPMGQTLPGFPGATVRYARRG*APSSPA
Trigger: GGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTA...CCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp TTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGAACGCGGCCCTTCCCTaGCCCCTTCCGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: FQATDGTNTPRLPRCHCPNAALP*PLPELL
Trigger: CAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCGCGTT...CGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp GGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCCAGGCTTCCCAGGTaGCACTGTCCGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: GAFISSYRWDKHSQASQVPRLPR*HCPGRH
Trigger: ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGG...CACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp CGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCACCCAGGCTTCCCAGGTaGCACTGTCCGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: RVSEGSVYFKLPMGQTLPPRLPR*HCPGRH
Trigger: ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGG...TGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp CGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACCCCTCTGGCCTCGGCTaGGATGGGCACGTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RLFQATDGTNTPRLPRCHPSGLG*DGHVPP
Trigger: AGGGGGAACGTGCCCATCGCAGCCGAGGCCAGAGGG...GTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587465.6
CDS-3UTR GCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCGCACAGCCAGGAGGCTaGAGACCCTGCCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCAQPGG*RPCPLS
Trigger: GCTGAGGGGGCAGGGTCTGCAGCCTCCTGGCTGTGC...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587758.5
CDS-3UTR CCA 90 bp GGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGGGGCGTTCCTCTTCTaGCTCTGCCACCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GCLRGAFISSYRWDKHSQGAFLF*LCHRLR
Trigger: CCGGAGCCGGTGGCAGAGCCAGAAGAGGAACGCCCC...CTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291901.12
ENST00000588981.6
CDS-3UTR CCA 90 bp CGTTCCTTCTCAGTTCTGAAGCGCTGTTGCTCGGCTCTCTCTGACCGGCGCCGCCCCTTCTGGGATCTTTaGCGGGATCAAAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RSFSVLKRCCSALSDRRRPFWDL*RDQRRH
Trigger: GTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGG...GCGGCGCCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp GCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGGCACCTTCTTTTTCTTaGCATCATCCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: ATDGTNTPRLPRCHCPGRAPSFS*HHPLPA
Trigger: AGCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGC...CCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCGCACCTTCTTTTTCTTaGCATCATCCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LPMGQTLPGFPGATVRGGAPSFS*HHPLPA
Trigger: AGCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGC...GCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp TTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGCAGTCCGACAGCTCCTaGGCTTTCTCCCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FKLPMGQTLPGFPGATVRQSDSS*AFSRSC
Trigger: ACAGCTCCGGGAGAAAGCCCAGGAGCTGTCGGACTG...CCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp TCTGACCGGCGCCGCTCAATGCGCTCCTTCAAGGCAACCAGCTCCTCTTCCTCCTTCTCAGACTCCAGCTaGTGGATCCAGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: SDRRRSMRSFKATSSSSSFSDSS*WIQSDS
Trigger: GCTGTCGGACTGGATCCACCAGCTGGAGTCTGAGAA...GGAGGAAGAGGAGCTGGTTGCCTTGAAGGAGCGCATTGAGCGGCGCCGGTCAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCTGGCGGTGCAGGGATaGCGCGAGGAGACGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVLAVQG*REETLQ
Trigger: CTGGAGCGTCTCCTCGCGCCATCCCTGCACCGCCAG...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587465.6
CDS-3UTR CCA 90 bp CGTTCGCGTTCCTTCTCAGTTCTGAAGCGCTGTTGCTCGGCTCTCTCTGACCGGCACAGAGACCATGAGTaGCCCGACCTCCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RSRSFSVLKRCCSALSDRHRDHE*PDLPEP
Trigger: TGGCTCAGGGAGGTCGGGCCACTCATGGTCTCTGTG...CCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAACGCGAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR TCA 90 bp TACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCACGAAATGTACATCGATaGGTGTCTGCAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: YRWDKHSQASQVPLSGAARNVHR*VSAAPA
Trigger: TGCTGGAGCTGCAGACACTCATCGATGTACATTTCG...TGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR TCA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCTTGCTCGGCTCTCTCTaGCCGGCGCCGCTCAATGCG +
Preference number: 4 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVLLGSL*PAPLNA
Trigger: CGCATTGAGCGGCGCCGGTCAGAGAGAGCCGAGCAA...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR TCA 90 bp AGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGTTGCTCGGCTCTCTCTaGCCGGCGCCGCTCAATGCG +
Preference number: 4 (lower is better)
Translates to: RGAFISSYRWDKHSQASQLLGSL*PAPLNA
Trigger: CGCATTGAGCGGCGCCGGTCAGAGAGAGCCGAGCAA...CTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR TCA 90 bp GAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCATTGCTCGGCTCTCTCTaGCCGGCGCCGCTCAATGCG +
Preference number: 4 (lower is better)
Translates to: EGSVYFKLPMGQTLPGFPLLGSL*PAPLNA
Trigger: CGCATTGAGCGGCGCCGGTCAGAGAGAGCCGAGCAA...TGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp AAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCTCCTCCTCATATTCCTaGTCCTCGGTGTCCGACATC +
Preference number: 4 (lower is better)
Translates to: KLPMGQTLPGFPGATVRGSSSYS*SSVSDI
Trigger: GATGTCGGACACCGAGGAGCAGGAATATGAGGAGGA...GCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp GAGGCTTCTTACGCTCGGAGAGGATGCGCACCTTCATCTCCCGCCCCGTCTGCCCTTTCTCCATGCGCTTaGGGTGGATGTCATCGAAGT +
Preference number: 4 (lower is better)
Translates to: EASYARRGCAPSSPAPSALSPCA*GGCHRS
Trigger: ACTTCGATGACATCCACCGCAAGCGCATGGAGAAAG...GGCAGACGGGGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTAAGAAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR GCA 90 bp TACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCAACATCGATGAGTGTCTaGAGCTCCAGCAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: YRWDKHSQASQVPLSGAATSMSV*SSSRSF
Trigger: GAAAGACCTGCTGGAGCTGCAGACACTCATCGATGT...TGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGTTCTGAAGCGCTGTTaGTCGGCTCTCTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: FKLPMGQTLPGFPGATVRVLKRC*SALSDR
Trigger: CCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAAC...CCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGATCTCCCGCCCCGTCTaGCGCTTACCACGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: FQATDGTNTPRLPRCHCPISRPV*RLPRFC
Trigger: ACAGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGAT...CGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp GTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTCCCAGGCTTCCCAGGTaGCACTGTCCGGGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: VYFKLPMGQTLPGFPGATPRLPR*HCPGRH
Trigger: ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGG...AGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp GTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCGGAGGCTGCAGACCCTaGCCCCTCAGCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: VSEGSVYFKLPMGQTLPGGGCRP*PLSTAV
Trigger: GACAGCTGTGCTGAGGGGGCAGGGTCTGCAGCCTCC...GCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587758.5
CDS-3UTR CCA 90 bp TCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGAACGCGCTCCCCTTCTaGGATCTTTGGCGGGATCAA +
Preference number: 4 (lower is better)
Translates to: SSYRWDKHSQASQVPLSGNALPF*DLWRDQ
Trigger: TTGATCCCGCCAAAGATCCCAGAAGGGGAGCGCGTT...CCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp CAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGTCCATGCGCTTGCGGTaGATGTCATCGAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: QATDGTNTPRLPRCHCPGSMRLR*MSSKST
Trigger: CGTTGACTTCGATGACATCCACCGCAAGCGCATGGA...CCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CCA 90 bp AAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCTCCATGCGCTTGCGGTaGATGTCATCGAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: KLPMGQTLPGFPGATVRGSMRLR*MSSKST
Trigger: CGTTGACTTCGATGACATCCACCGCAAGCGCATGGA...GCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CCA 90 bp ACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATGCACCTTCTTTTTCTTaGCATCATCCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: TDGTNTPRLPRCHCPGRHAPSFS*HHPLPA
Trigger: AGCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGC...ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp TACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCAGCACCTTCTTTTTCTTaGCATCATCCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: YRWDKHSQASQVPLSGAAAPSFS*HHPLPA
Trigger: AGCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGC...TGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CGGCCCTTCCCTGCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTTGTACAATGGGCCCCCATGTTaGACAGCACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RPFPAPFRNFWAWLMRLYNGPPC*TAPSFS
Trigger: AGAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATT...GTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp GGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCTGGGCTTTCTCCCTaGCAGGGCAGGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GAFISSYRWDKHSQASQVPGLSP*QGRRAV
Trigger: CACAGCCCTCCTGCCCTGCCAGGGAGAAAGCCCAGG...CACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588981.6
CDS-3UTR TCA 90 bp CCGCTGCTCGAAATGTACATCGATGAGTGTCTGCAGCTCCAGCAGGTCTTTCTCGCACCACGGGGCGGCTaGGTGGACAGAAACACAGAG +
Preference number: 4 (lower is better)
Translates to: PLLEMYIDECLQLQQVFLAPRGG*VDRNTE
Trigger: CTCTGTGTTTCTGTCCACTCAGCCGCCCCGTGGTGC...GAGAAAGACCTGCTGGAGCTGCAGACACTCATCGATGTACATTTCGAGCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR GCA 90 bp AGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGTCCTCCTTCTTCCGCTaGTCGAAATGTACATCGATG +
Preference number: 4 (lower is better)
Translates to: SYRWDKHSQASQVPLSGASSFFR*SKCTSM
Trigger: CATCGATGTACATTTCGAGCAGCGGAAGAAGGAGGA...CGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp ATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCTACGCTCGGAGAGGATaGGCACCTTCATCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: ISSYRWDKHSQASQVPLSYARRG*APSSPA
Trigger: GGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTA...GGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp GGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTAACGCGGCCCTTCCCTaGCCCCTTCCGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: GSVYFKLPMGQTLPGFPGNAALP*PLPELL
Trigger: CAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCGCGTT...ACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp GGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGAACGCGGCCCTTCCCTaGCCCCTTCCGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: GCLRGAFISSYRWDKHSQNAALP*PLPELL
Trigger: CAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCGCGTT...CTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCACGGTGTCCGACATCCTaGTGCGGCCTAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RVSEGSVYFKLPMGQTLPRCPTS*CGLGCV
Trigger: GACACAGCCTAGGCCGCACCAGGATGTCGGACACCG...TGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000588426.5
ENST00000588981.6
CDS-3UTR CCA 90 bp GGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCGGTGTCCGACATCCTaGTGCGGCCTAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GAFISSYRWDKHSQASQVRCPTS*CGLGCV
Trigger: GACACAGCCTAGGCCGCACCAGGATGTCGGACACCG...CACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR CCA 90 bp AGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGCGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RGAFISSYRWDKHSQASQRGGLV*GVPLLA
Trigger: AGCCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCG...CTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
CDS-3UTR CCA 90 bp GGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTCACCACGGGGCGGCTTaGTTTGGGGCGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GSVYFKLPMGQTLPGFPGHHGAA*FGAFLF
Trigger: GAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTG...ACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp GGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCACCACGGGGCGGCTTaGTTTGGGGCGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GAFISSYRWDKHSQASQVHHGAA*FGAFLF
Trigger: GAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTG...CACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp GTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCCACCACGGGGCGGCTTaGTTTGGGGCGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VSEGSVYFKLPMGQTLPGHHGAA*FGAFLF
Trigger: GAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTG...GCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp TCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGTCCATGCGCTTGCGGTaGATGTCATCGAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: SSYRWDKHSQASQVPLSGSMRLR*MSSKST
Trigger: CGTTGACTTCGATGACATCCACCGCAAGCGCATGGA...CCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CCA 90 bp TACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCAAATGGGCCCCCATGTTaGACAGCACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: YRWDKHSQASQVPLSGAANGPPC*TAPSFS
Trigger: AGAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATT...TGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGCCCTTCCGGAACTTCTaGGCGTGGCTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: GERLFQATDGTNTPRLPRPFRNF*AWLMRL
Trigger: CAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGG...CCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp ATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCCCCTTCCGGAACTTCTaGGCGTGGCTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: ISSYRWDKHSQASQVPLSPFRNF*AWLMRL
Trigger: CAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGG...GGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CAGAGAACCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QRTQRVSEGSVYFKLPMGRGGLV*GVPLLP
Trigger: AGGAAGAAGAGGAACGCCCCAAACCAAGCCGCCCCG...TCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356783.9
ENST00000587758.5
CDS-3UTR TCA 90 bp CGTTCGCGTTCCTTCTCAGTTCTGAAGCGCTGTTGCTCGGCTCTCTCTGACCGGGCTTCTGTTCTGCCTTaGCCAGGTAGCCGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: RSRSFSVLKRCCSALSDRASVLP*PGSRQN
Trigger: ATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAGC...CCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAACGCGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR TCA 90 bp GCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGGGTTGTACAGCACGTTaGTCTCATATTTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ATDGTNTPRLPRCHCPGRGCTAR*SHISAV
Trigger: AACAGCAGAAATATGAGATCAACGTGCTGTACAACC...CCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp CTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCGGTTGTACAGCACGTTaGTCTCATATTTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LPMGQTLPGFPGATVRGGGCTAR*SHISAV
Trigger: AACAGCAGAAATATGAGATCAACGTGCTGTACAACC...GCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp CCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACACTTCTGGGCGTGGCTaGTGCGGTTGTACAGCACGT +
Preference number: 4 (lower is better)
Translates to: PSGCLRGAFISSYRWDKHTSGRG*CGCTAR
Trigger: ACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGT...GTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp CAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGTCCTCCTTCTTCCGCTaGTCGAAATGTACATCGATG +
Preference number: 4 (lower is better)
Translates to: QATDGTNTPRLPRCHCPGSSFFR*SKCTSM
Trigger: CATCGATGTACATTTCGAGCAGCGGAAGAAGGAGGA...CCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp GCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCAACCGGCGCCGCTCAATaGGCTCCTTCAAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: AFISSYRWDKHSQASQVPTGAAQ*APSRQP
Trigger: TGGTTGCCTTGAAGGAGCGCATTGAGCGGCGCCGGT...TGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCACCGGCGCCGCTCAATaGGCTCCTTCAAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVTGAAQ*APSRQP
Trigger: TGGTTGCCTTGAAGGAGCGCATTGAGCGGCGCCGGT...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCATCTCCCGCCCCGTCTaGCGCTTACCACGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCISRPV*RLPRFC
Trigger: ACAGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGAT...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp CGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACATCTCCCGCCCCGTCTaGCGCTTACCACGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RLFQATDGTNTPRLPRCHISRPV*RLPRFC
Trigger: ACAGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGAT...GTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp CTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCATCTCCCGCCCCGTCTaGCGCTTACCACGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LRGAFISSYRWDKHSQASISRPV*RLPRFC
Trigger: ACAGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGAT...GGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp AGAACCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAATCTCCCGCCCCGTCTaGCGCTTACCACGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RTQRVSEGSVYFKLPMGQISRPV*RLPRFC
Trigger: ACAGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGAT...TTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp GGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGATCTCCCGCCCCGTCTaGCGCTTACCACGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GCLRGAFISSYRWDKHSQISRPV*RLPRFC
Trigger: ACAGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGAT...CTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp CGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAATCTCCCGCCCCGTCTaGCGCTTACCACGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RVSEGSVYFKLPMGQTLPISRPV*RLPRFC
Trigger: ACAGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGAT...TGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCTACGCTCGGAGAGGATaGGCACCTTCATCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVYARRG*APSSPA
Trigger: GGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTA...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp CCGCTGCTCGAAATGTACATCGATGAGTGTCTGCAGCTCCAGCAGGTCTTTCTCTACGCTCGGAGAGGATaGGCACCTTCATCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: PLLEMYIDECLQLQQVFLYARRG*APSSPA
Trigger: GGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTA...GAGAAAGACCTGCTGGAGCTGCAGACACTCATCGATGTACATTTCGAGCAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR GCA 90 bp GCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCATACGCTCGGAGAGGATaGGCACCTTCATCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: AFISSYRWDKHSQASQVPYARRG*APSSPA
Trigger: GGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTA...TGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp CTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCTACGCTCGGAGAGGATaGGCACCTTCATCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: LRGAFISSYRWDKHSQASYARRG*APSSPA
Trigger: GGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTA...GGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCTACGCTCGGAGAGGATaGGCACCTTCATCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCYARRG*APSSPA
Trigger: GGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTA...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp TTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGAACGCGGCCCTTCCCTaGCCCCTTCCGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: FISSYRWDKHSQASQVPLNAALP*PLPELL
Trigger: CAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCGCGTT...CAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp GTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTCAGGGTTCCAGTCTCTaGTGGACGGGGGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VYFKLPMGQTLPGFPGATQGSSL*WTGVPL
Trigger: CAGAGGGACCCCCGTCCAGCAGAGACTGGAACCCTG...AGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587465.6
CDS-3UTR CCA 90 bp TTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCGGTGTCCGACATCCTaGTGCGGCCTAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LFQATDGTNTPRLPRCHCRCPTS*CGLGCV
Trigger: GACACAGCCTAGGCCGCACCAGGATGTCGGACACCG...ACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR CCA 90 bp TTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LFQATDGTNTPRLPRCHCRGGLV*GVPLLA
Trigger: AGCCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCG...ACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
CDS-3UTR CCA 90 bp TGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTCGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CLRGAFISSYRWDKHSQARGGLV*GVPLLA
Trigger: AGCCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCG...AGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291901.12
ENST00000588981.6
CDS-3UTR CCA 90 bp TGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTCACCACGGGGCGGCTTaGTTTGGGGCGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CLRGAFISSYRWDKHSQAHHGAA*FGAFLF
Trigger: GAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTG...AGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp TTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGCCCTTCTGGGATCTTTaGCGGGATCAAAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: FQATDGTNTPRLPRCHCPPFWDL*RDQRRH
Trigger: GTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGG...CGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp TTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGAACGCGCTCCCCTTCTaGGATCTTTGGCGGGATCAA +
Preference number: 4 (lower is better)
Translates to: FQATDGTNTPRLPRCHCPNALPF*DLWRDQ
Trigger: TTGATCCCGCCAAAGATCCCAGAAGGGGAGCGCGTT...CGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp AAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCAATGGGCCCCCATGTTaGACAGCACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: KLPMGQTLPGFPGATVRGNGPPC*TAPSFS
Trigger: AGAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATT...GCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCCAGTCCGACAGCTCCTaGGCTTTCTCCCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VSEGSVYFKLPMGQTLPGQSDSS*AFSRSC
Trigger: ACAGCTCCGGGAGAAAGCCCAGGAGCTGTCGGACTG...GCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCAGTCCGACAGCTCCTaGGCTTTCTCCCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCQSDSS*AFSRSC
Trigger: ACAGCTCCGGGAGAAAGCCCAGGAGCTGTCGGACTG...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCACAGTCCGACAGCTCCTaGGCTTTCTCCCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: EGSVYFKLPMGQTLPGFPQSDSS*AFSRSC
Trigger: ACAGCTCCGGGAGAAAGCCCAGGAGCTGTCGGACTG...TGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACAGTCCGACAGCTCCTaGGCTTTCTCCCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: AFISSYRWDKHSQASQVPQSDSS*AFSRSC
Trigger: ACAGCTCCGGGAGAAAGCCCAGGAGCTGTCGGACTG...TGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCAGACTCCAGCTGGTaGATCCAGTCCGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSGCLRGAFISSYRWDKHSDSSW*IQSDSS
Trigger: GGAGCTGTCGGACTGGATCCACCAGCTGGAGTCTGA...GTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR CCA 90 bp TTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGTTCTCAGACTCCAGCTaGTGGATCCAGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: FQATDGTNTPRLPRCHCPFSDSS*WIQSDS
Trigger: GCTGTCGGACTGGATCCACCAGCTGGAGTCTGAGAA...CGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp ATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCCGGAACTTCTGGGCGTaGCTGATGCGGTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: ISSYRWDKHSQASQVPLSRNFWA*LMRLYS
Trigger: GCTGTACAACCGCATCAGCCACGCCCAGAAGTTCCG...GGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCACCCTTCCGGAACTTCTaGGCGTGGCTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: RVSEGSVYFKLPMGQTLPPFRNF*AWLMRL
Trigger: CAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGG...TGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CCA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCCCTTCCGGAACTTCTaGGCGTGGCTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVPFRNF*AWLMRL
Trigger: CAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGG...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCACCCTTCCGGAACTTCTaGGCGTGGCTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: EGSVYFKLPMGQTLPGFPPFRNF*AWLMRL
Trigger: CAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGG...TGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGCCCTTCCGGAACTTCTaGGCGTGGCTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: GCLRGAFISSYRWDKHSQPFRNF*AWLMRL
Trigger: CAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGG...CTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCRGGLV*GVPLLP
Trigger: AGGAAGAAGAGGAACGCCCCAAACCAAGCCGCCCCG...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
CDS-3UTR CCA 90 bp CAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QRVSEGSVYFKLPMGQTLRGGLV*GVPLLP
Trigger: AGGAAGAAGAGGAACGCCCCAAACCAAGCCGCCCCG...GAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356783.9
ENST00000587758.5
CDS-3UTR TCA 90 bp GGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGGTTCCTTCTCAGTTCTaGAGCGCTGTTGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: GERLFQATDGTNTPRLPRVPSQF*SAVARL
Trigger: GAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAAC...CCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR TCA 90 bp GCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCATCCGCCAGCTTAGCCTaGCGTTCGCGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: AFISSYRWDKHSQASQVPSASLA*RSRSFS
Trigger: TGAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGA...TGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp GGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTTCCGCCAGCTTAGCCTaGCGTTCGCGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GSVYFKLPMGQTLPGFPGSASLA*RSRSFS
Trigger: TGAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGA...ACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp CTCCTTCTTCCGCTGCTCGAAATGTACATCGATGAGTGTCTGCAGCTCCAGCAGTCCGCCAGCTTAGCCTaGCGTTCGCGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLLPLLEMYIDECLQLQQSASLA*RSRSFS
Trigger: TGAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGA...CTGCTGGAGCTGCAGACACTCATCGATGTACATTTCGAGCAGCGGAAGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR TCA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCTCCGCCAGCTTAGCCTaGCGTTCGCGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVSASLA*RSRSFS
Trigger: TGAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGA...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp CTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCTCCGCCAGCTTAGCCTaGCGTTCGCGTTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LRGAFISSYRWDKHSQASSASLA*RSRSFS
Trigger: TGAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGA...GGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp AGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGGTTGTACAGCACGTTaGTCTCATATTTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SYRWDKHSQASQVPLSGAGCTAR*SHISAV
Trigger: AACAGCAGAAATATGAGATCAACGTGCTGTACAACC...CGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp CGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACACTTCTGGGCGTGGCTaGTGCGGTTGTACAGCACGT +
Preference number: 4 (lower is better)
Translates to: RLFQATDGTNTPRLPRCHTSGRG*CGCTAR
Trigger: ACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGT...GTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCACTTCTGGGCGTGGCTaGTGCGGTTGTACAGCACGT +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCTSGRG*CGCTAR
Trigger: ACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGT...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCTCCGCCAGCTTAGCCTaGCGTTCGCGTTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCSASLA*RSRSFF
Trigger: GAAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGA...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588426.5
CDS-3UTR GCA 90 bp CTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCGCCTCCTCTTCCGGCTaGTCCTCCTCATATTCCTGC +
Preference number: 4 (lower is better)
Translates to: LRGAFISSYRWDKHSQASASSSG*SSSYSC
Trigger: GCAGGAATATGAGGAGGAGCAGCCGGAAGAGGAGGC...GGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp TTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTTCCTCTTCTGGCTCTaGCACCGGCTCCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FISSYRWDKHSQASQVPLFLFWL*HRLRLF
Trigger: GAAGAGCCGGAGCCGGTGGCAGAGCCAGAAGAGGAA...CAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
CDS-3UTR GCA 90 bp TCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCACCGGCGCCGCTCAATaGGCTCCTTCAAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: SEGSVYFKLPMGQTLPGFTGAAQ*APSRQP
Trigger: TGGTTGCCTTGAAGGAGCGCATTGAGCGGCGCCGGT...GAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCGTTCTGAAGCGCTGTTaGTCGGCTCTCTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVVLKRC*SALSDR
Trigger: CCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAAC...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp GGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGTTCTGAAGCGCTGTTaGTCGGCTCTCTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: GCLRGAFISSYRWDKHSQVLKRC*SALSDR
Trigger: CCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAAC...CTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TTCCGCTGCTCGAAATGTACATCGATGAGTGTCTGCAGCTCCAGCAGGTCTTTCATCTCCCGCCCCGTCTaGCGCTTACCACGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: FRCSKCTSMSVCSSSRSFISRPV*RLPRFC
Trigger: ACAGAAGCGTGGTAAGCGGCAGACGGGGCGGGAGAT...GAAAGACCTGCTGGAGCTGCAGACACTCATCGATGTACATTTCGAGCAGCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR GCA 90 bp TCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCTACGCTCGGAGAGGATaGGCACCTTCATCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: SEGSVYFKLPMGQTLPGFYARRG*APSSPA
Trigger: GGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTA...GAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp TTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTTACGCTCGGAGAGGATaGGCACCTTCATCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: LFQATDGTNTPRLPRCHCYARRG*APSSPA
Trigger: GGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTA...ACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp TGCTCGAAATGTACATCGATGAGTGTCTGCAGCTCCAGCAGGTCTTTCTCCATGAACGCGGCCCTTCCCTaGCCCCTTCCGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: CSKCTSMSVCSSSRSFSMNAALP*PLPELL
Trigger: CAGAAGTTCCGGAAGGGGGCAGGGAAGGGCCGCGTT...CATGGAGAAAGACCTGCTGGAGCTGCAGACACTCATCGATGTACATTTCGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp CAGAGAACCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACCCTTCTGGGATCTTTaGCGGGATCAAAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: QRTQRVSEGSVYFKLPMGPFWDL*RDQRRH
Trigger: GTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGG...TCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp CCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACCCCTTCTGGGATCTTTaGCGGGATCAAAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PSGCLRGAFISSYRWDKHPFWDL*RDQRRH
Trigger: GTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGG...GTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp GTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTCAGACTCCAGCTGGTaGATCCAGTCCGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSEGSVYFKLPMGQTLPGSDSSW*IQSDSS
Trigger: GGAGCTGTCGGACTGGATCCACCAGCTGGAGTCTGA...GCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTTCAGACTCCAGCTGGTaGATCCAGTCCGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GSVYFKLPMGQTLPGFPGSDSSW*IQSDSS
Trigger: GGAGCTGTCGGACTGGATCCACCAGCTGGAGTCTGA...ACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTCAGACTCCAGCTGGTaGATCCAGTCCGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RLFQATDGTNTPRLPRCHSDSSW*IQSDSS
Trigger: GGAGCTGTCGGACTGGATCCACCAGCTGGAGTCTGA...GTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCTCAGACTCCAGCTGGTaGATCCAGTCCGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCSDSSW*IQSDSS
Trigger: GGAGCTGTCGGACTGGATCCACCAGCTGGAGTCTGA...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp AGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGCGGAACTTCTGGGCGTaGCTGATGCGGTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: RGAFISSYRWDKHSQASQRNFWA*LMRLYS
Trigger: GCTGTACAACCGCATCAGCCACGCCCAGAAGTTCCG...CTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACGGAACTTCTGGGCGTaGCTGATGCGGTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: AFISSYRWDKHSQASQVPRNFWA*LMRLYS
Trigger: GCTGTACAACCGCATCAGCCACGCCCAGAAGTTCCG...TGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCACGGAACTTCTGGGCGTaGCTGATGCGGTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: EGSVYFKLPMGQTLPGFPRNFWA*LMRLYS
Trigger: GCTGTACAACCGCATCAGCCACGCCCAGAAGTTCCG...TGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGCGGAACTTCTGGGCGTaGCTGATGCGGTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: GCLRGAFISSYRWDKHSQRNFWA*LMRLYS
Trigger: GCTGTACAACCGCATCAGCCACGCCCAGAAGTTCCG...CTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCACGGAACTTCTGGGCGTaGCTGATGCGGTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: RVSEGSVYFKLPMGQTLPRNFWA*LMRLYS
Trigger: GCTGTACAACCGCATCAGCCACGCCCAGAAGTTCCG...TGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CCA 90 bp GTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTCTCCGCAGCCTCCTCTaGAGATGGGGGCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: VYFKLPMGQTLPGFPGATLRSLL*RWGHRR
Trigger: TCTTCTGTGCCCCCATCTCCAGAGGAGGCTGCGGAG...AGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587465.6
CDS-3UTR TCA 90 bp GTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCGTTCCTTCTCAGTTCTaGAGCGCTGTTGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: VSEGSVYFKLPMGQTLPGVPSQF*SAVARL
Trigger: GAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAAC...GCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR TCA 90 bp GCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCAGTTCCTTCTCAGTTCTaGAGCGCTGTTGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: AFISSYRWDKHSQASQVPVPSQF*SAVARL
Trigger: GAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAAC...TGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR TCA 90 bp CTGTTCCTCCCCCATGTAGTCAATGTCCAGAGGCTTCTTACGCTCGGAGAGGATGTTCCTTCTCAGTTCTaGAGCGCTGTTGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: LFLPHVVNVQRLLTLGEDVPSQF*SAVARL
Trigger: GAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAAC...ATCCTCTCCGAGCGTAAGAAGCCTCTGGACATTGACTACATGGGGGAGGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR TCA 90 bp GGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGTTCCTTCTCAGTTCTaGAGCGCTGTTGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: GSVYFKLPMGQTLPGFPGVPSQF*SAVARL
Trigger: GAGCCGAGCAACAGCGCTTCAGAACTGAGAAGGAAC...ACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR TCA 90 bp GGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGGCTTCTGTTCTGCCTTaGCCAGGTAGCCGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: GERLFQATDGTNTPRLPRASVLP*PGSRQN
Trigger: ATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAGC...CCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp TCTGACCGGCGCCGCTCAATGCGCTCCTTCAAGGCAACCAGCTCCTCTTCCTCCGGTTGTACAGCACGTTaGTCTCATATTTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SDRRRSMRSFKATSSSSSGCTAR*SHISAV
Trigger: AACAGCAGAAATATGAGATCAACGTGCTGTACAACC...GGAGGAAGAGGAGCTGGTTGCCTTGAAGGAGCGCATTGAGCGGCGCCGGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR TCA 90 bp TCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCACTTCTGGGCGTGGCTaGTGCGGTTGTACAGCACGT +
Preference number: 4 (lower is better)
Translates to: SEGSVYFKLPMGQTLPGFTSGRG*CGCTAR
Trigger: ACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGT...GAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp TGTAGTCAATGTCCAGAGGCTTCTTACGCTCGGAGAGGATGCGCACCTTCATCTACTTCTGGGCGTGGCTaGTGCGGTTGTACAGCACGT +
Preference number: 4 (lower is better)
Translates to: CSQCPEASYARRGCAPSSTSGRG*CGCTAR
Trigger: ACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGT...AGATGAAGGTGCGCATCCTCTCCGAGCGTAAGAAGCCTCTGGACATTGACTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR TCA 90 bp GGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGAACCCAGCGGGTGTCTaGGGGGAGCGTTTATTTCAA +
Preference number: 4 (lower is better)
Translates to: GERLFQATDGTNTPRLPRNPAGV*GERLFQ
Trigger: TTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTT...CCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR TCA 90 bp ATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCAACCCAGCGGGTGTCTaGGGGGAGCGTTTATTTCAA +
Preference number: 4 (lower is better)
Translates to: ISSYRWDKHSQASQVPLSNPAGV*GERLFQ
Trigger: TTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTT...GGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp CAGAGAACCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGATCCTCCTCATATTCCTaGTCCTCGGTGTCCGACATC +
Preference number: 4 (lower is better)
Translates to: QRTQRVSEGSVYFKLPMGSSSYS*SSVSDI
Trigger: GATGTCGGACACCGAGGAGCAGGAATATGAGGAGGA...TCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp GTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGCCTCCTCTTCCGGCTaGTCCTCCTCATATTCCTGC +
Preference number: 4 (lower is better)
Translates to: VYFKLPMGQTLPGFPGATASSSG*SSSYSC
Trigger: GCAGGAATATGAGGAGGAGCAGCCGGAAGAGGAGGC...AGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp TCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCGCCTCCTCTTCCGGCTaGTCCTCCTCATATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SEGSVYFKLPMGQTLPGFASSSG*SSSYSC
Trigger: GCAGGAATATGAGGAGGAGCAGCCGGAAGAGGAGGC...GAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp TTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGGCCTCCTCTTCCGGCTaGTCCTCCTCATATTCCTGC +
Preference number: 4 (lower is better)
Translates to: FISSYRWDKHSQASQVPLASSSG*SSSYSC
Trigger: GCAGGAATATGAGGAGGAGCAGCCGGAAGAGGAGGC...CAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp TTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGCTTTCTCCATGCGCTTaGGGTGGATGTCATCGAAGT +
Preference number: 4 (lower is better)
Translates to: FQATDGTNTPRLPRCHCPLSPCA*GGCHRS
Trigger: ACTTCGATGACATCCACCGCAAGCGCATGGAGAAAG...CGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGTCCTCCTTCTTCCGCTaGTCGAAATGTACATCGATG +
Preference number: 4 (lower is better)
Translates to: FKLPMGQTLPGFPGATVRSSFFR*SKCTSM
Trigger: CATCGATGTACATTTCGAGCAGCGGAAGAAGGAGGA...CCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CCA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCCCTTCTGGGATCTTTaGCGGGATCAAAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVPFWDL*RDQRRH
Trigger: GTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGG...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp AGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGCCCTTCTGGGATCTTTaGCGGGATCAAAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RGAFISSYRWDKHSQASQPFWDL*RDQRRH
Trigger: GTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGG...CTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCAACGCGCTCCCCTTCTaGGATCTTTGGCGGGATCAA +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCNALPF*DLWRDQ
Trigger: TTGATCCCGCCAAAGATCCCAGAAGGGGAGCGCGTT...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp CGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAAACGCGCTCCCCTTCTaGGATCTTTGGCGGGATCAA +
Preference number: 4 (lower is better)
Translates to: RVSEGSVYFKLPMGQTLPNALPF*DLWRDQ
Trigger: TTGATCCCGCCAAAGATCCCAGAAGGGGAGCGCGTT...TGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp CGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACAACGCGCTCCCCTTCTaGGATCTTTGGCGGGATCAA +
Preference number: 4 (lower is better)
Translates to: RLFQATDGTNTPRLPRCHNALPF*DLWRDQ
Trigger: TTGATCCCGCCAAAGATCCCAGAAGGGGAGCGCGTT...GTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp GGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTCCATGCGCTTGCGGTaGATGTCATCGAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: GERLFQATDGTNTPRLPRSMRLR*MSSKST
Trigger: CGTTGACTTCGATGACATCCACCGCAAGCGCATGGA...CCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CCA 90 bp TTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGCACCTTCTTTTTCTTaGCATCATCCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: FQATDGTNTPRLPRCHCPAPSFS*HHPLPA
Trigger: AGCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGC...CGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp TTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCAGACTCCAGCTGGTaGATCCAGTCCGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: FISSYRWDKHSQASQVPLSDSSW*IQSDSS
Trigger: GGAGCTGTCGGACTGGATCCACCAGCTGGAGTCTGA...CAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGTTCTCAGACTCCAGCTaGTGGATCCAGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: GAFISSYRWDKHSQASQVFSDSS*WIQSDS
Trigger: GCTGTCGGACTGGATCCACCAGCTGGAGTCTGAGAA...CACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCTCAGACTCCAGCTaGTGGATCCAGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: VSEGSVYFKLPMGQTLPGFSDSS*WIQSDS
Trigger: GCTGTCGGACTGGATCCACCAGCTGGAGTCTGAGAA...GCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTTTCTCAGACTCCAGCTaGTGGATCCAGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: GSVYFKLPMGQTLPGFPGFSDSS*WIQSDS
Trigger: GCTGTCGGACTGGATCCACCAGCTGGAGTCTGAGAA...ACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CTCCTCTTCCTCCTTCTTCCGCTGCTCGAAATGTACATCGATGAGTGTCTGCAGCGGAACTTCTGGGCGTaGCTGATGCGGTTGTACAGC +
Preference number: 4 (lower is better)
Translates to: LLFLLLPLLEMYIDECLQRNFWA*LMRLYS
Trigger: GCTGTACAACCGCATCAGCCACGCCCAGAAGTTCCG...CTGCAGACACTCATCGATGTACATTTCGAGCAGCGGAAGAAGGAGGAAGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
3UTR CAA 72 bp GCCCCCTTCCGGAACTTCTGGGCGTGGCTGATGCGGTaGTACAGCACGTTGATCTCATATTTCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: APFRNFWAWLMR*YSTLISYFCCF
Trigger: GAAACAGCAGAAATATGAGATCAACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGTTCCGGAAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR TCA 90 bp AGAACCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAGGCCTAGGCTGTGTCTaGGATGCTGTGAATCTTGAG +
Preference number: 4 (lower is better)
Translates to: RTQRVSEGSVYFKLPMGQGLGCV*DAVNLE
Trigger: CTCAAGATTCACAGCATCTCAGACACAGCCTAGGCC...TTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000588426.5
ENST00000588981.6
CDS-3UTR TCA 90 bp AGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCGCTTCTGTTCTGCCTTaGCCAGGTAGCCGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: SVYFKLPMGQTLPGFPGAASVLP*PGSRQN
Trigger: ATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAGC...GGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCGCTTCTGTTCTGCCTTaGCCAGGTAGCCGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCASVLP*PGSRQN
Trigger: ATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAGC...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCGCTTCTGTTCTGCCTTaGCCAGGTAGCCGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVASVLP*PGSRQN
Trigger: ATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAGC...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp GCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCAAACCCAGCGGGTGTCTaGGGGGAGCGTTTATTTCAA +
Preference number: 4 (lower is better)
Translates to: AFISSYRWDKHSQASQVPNPAGV*GERLFQ
Trigger: TTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTT...TGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR TCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCAACCCAGCGGGTGTCTaGGGGGAGCGTTTATTTCAA +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCNPAGV*GERLFQ
Trigger: TTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTT...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp ATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCCTTTCTCCATGCGCTTaGGGTGGATGTCATCGAAGT +
Preference number: 4 (lower is better)
Translates to: ISSYRWDKHSQASQVPLSLSPCA*GGCHRS
Trigger: ACTTCGATGACATCCACCGCAAGCGCATGGAGAAAG...GGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp ATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCACATCGATGAGTGTCTaGAGCTCCAGCAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: ISSYRWDKHSQASQVPLSTSMSV*SSSRSF
Trigger: GAAAGACCTGCTGGAGCTGCAGACACTCATCGATGT...GGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp CTTCTGTTCTGCCTTGACCAGGTAGCCGCCAAAATGGGCCCCCATGTTGGACAGTCCTCCTTCTTCCGCTaGTCGAAATGTACATCGATG +
Preference number: 4 (lower is better)
Translates to: LLFCLDQVAAKMGPHVGQSSFFR*SKCTSM
Trigger: CATCGATGTACATTTCGAGCAGCGGAAGAAGGAGGA...CTGTCCAACATGGGGGCCCATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR GCA 90 bp TTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGTCCTCCTTCTTCCGCTaGTCGAAATGTACATCGATG +
Preference number: 4 (lower is better)
Translates to: FQATDGTNTPRLPRCHCPSSFFR*SKCTSM
Trigger: CATCGATGTACATTTCGAGCAGCGGAAGAAGGAGGA...CGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TGCTCGAAATGTACATCGATGAGTGTCTGCAGCTCCAGCAGGTCTTTCTCCATGGTTCTGAAGCGCTGTTaGTCGGCTCTCTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: CSKCTSMSVCSSSRSFSMVLKRC*SALSDR
Trigger: CCGGTCAGAGAGAGCCGAGCAACAGCGCTTCAGAAC...CATGGAGAAAGACCTGCTGGAGCTGCAGACACTCATCGATGTACATTTCGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp GTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTCCCTTCTGGGATCTTTaGCGGGATCAAAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VYFKLPMGQTLPGFPGATPFWDL*RDQRRH
Trigger: GTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGG...AGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CCA 90 bp TGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTTCTCAGACTCCAGCTaGTGGATCCAGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: CLRGAFISSYRWDKHSQAFSDSS*WIQSDS
Trigger: GCTGTCGGACTGGATCCACCAGCTGGAGTCTGAGAA...AGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp TTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTTCTCAGACTCCAGCTaGTGGATCCAGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: FISSYRWDKHSQASQVPLFSDSS*WIQSDS
Trigger: GCTGTCGGACTGGATCCACCAGCTGGAGTCTGAGAA...CAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp TTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGGGCCTAGGCTGTGTCTaGGATGCTGTGAATCTTGAG +
Preference number: 4 (lower is better)
Translates to: FISSYRWDKHSQASQVPLGLGCV*DAVNLE
Trigger: CTCAAGATTCACAGCATCTCAGACACAGCCTAGGCC...CAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR TCA 90 bp AGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCCGAAATGTACATCGATaGGTGTCTGCAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SVYFKLPMGQTLPGFPGARNVHR*VSAAPA
Trigger: TGCTGGAGCTGCAGACACTCATCGATGTACATTTCG...GGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR TCA 90 bp TGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTGCTTCTGTTCTGCCTTaGCCAGGTAGCCGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: CLRGAFISSYRWDKHSQAASVLP*PGSRQN
Trigger: ATTTTGGCGGCTACCTGGTCAAGGCAGAACAGAAGC...AGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp ATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCAACCTAGGCTGTGTCTaGGATGCTGTGAATCTTGAG +
Preference number: 4 (lower is better)
Translates to: ISSYRWDKHSQASQVPLSNLGCV*DAVNLE
Trigger: CTCAAGATTCACAGCATCTCAGACACAGCCTAGGTT...GGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587758.5
CDS-3UTR GCA 90 bp TCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCTCCTCCTCATATTCCTaGTCCTCGGTGTCCGACATC +
Preference number: 4 (lower is better)
Translates to: SEGSVYFKLPMGQTLPGFSSSYS*SSVSDI
Trigger: GATGTCGGACACCGAGGAGCAGGAATATGAGGAGGA...GAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp GTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTTCCTCCTCATATTCCTaGTCCTCGGTGTCCGACATC +
Preference number: 4 (lower is better)
Translates to: VYFKLPMGQTLPGFPGATSSSYS*SSVSDI
Trigger: GATGTCGGACACCGAGGAGCAGGAATATGAGGAGGA...AGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR GCA 90 bp AGAACCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAACTTTCTCCATGCGCTTaGGGTGGATGTCATCGAAGT +
Preference number: 4 (lower is better)
Translates to: RTQRVSEGSVYFKLPMGQLSPCA*GGCHRS
Trigger: ACTTCGATGACATCCACCGCAAGCGCATGGAGAAAG...TTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
CDS-3UTR GCA 90 bp AGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCCTTTCTCCATGCGCTTaGGGTGGATGTCATCGAAGT +
Preference number: 4 (lower is better)
Translates to: SVYFKLPMGQTLPGFPGALSPCA*GGCHRS
Trigger: ACTTCGATGACATCCACCGCAAGCGCATGGAGAAAG...GGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCACATCGATGAGTGTCTaGAGCTCCAGCAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCTSMSV*SSSRSF
Trigger: GAAAGACCTGCTGGAGCTGCAGACACTCATCGATGT...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp CGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACACATCGATGAGTGTCTaGAGCTCCAGCAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RLFQATDGTNTPRLPRCHTSMSV*SSSRSF
Trigger: GAAAGACCTGCTGGAGCTGCAGACACTCATCGATGT...GTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp GAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAACATCGATGAGTGTCTaGAGCTCCAGCAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: EGSVYFKLPMGQTLPGFPTSMSV*SSSRSF
Trigger: GAAAGACCTGCTGGAGCTGCAGACACTCATCGATGT...TGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp GGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTACATCGATGAGTGTCTaGAGCTCCAGCAGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GSVYFKLPMGQTLPGFPGTSMSV*SSSRSF
Trigger: GAAAGACCTGCTGGAGCTGCAGACACTCATCGATGT...ACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CCA 90 bp TGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCATGCGCTTGCGGTaGATGTCATCGAAGTCAACG +
Preference number: 4 (lower is better)
Translates to: CLRGAFISSYRWDKHSQASMRLR*MSSKST
Trigger: CGTTGACTTCGATGACATCCACCGCAAGCGCATGGA...AGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CCA 90 bp CTGTTCCTCCCCCATGTAGTCAATGTCCAGAGGCTTCTTACGCTCGGAGAGGATGCACCTTCTTTTTCTTaGCATCATCCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LFLPHVVNVQRLLTLGEDAPSFS*HHPLPA
Trigger: AGCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGC...ATCCTCTCCGAGCGTAAGAAGCCTCTGGACATTGACTACATGGGGGAGGAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CCA 90 bp AGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGCACCTTCTTTTTCTTaGCATCATCCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: RGAFISSYRWDKHSQASQAPSFS*HHPLPA
Trigger: AGCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGC...CTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACAATGGGCCCCCATGTTaGACAGCACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PSGCLRGAFISSYRWDKHNGPPC*TAPSFS
Trigger: AGAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATT...GTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR CCA 90 bp ATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCAATGGGCCCCCATGTTaGACAGCACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: ISSYRWDKHSQASQVPLSNGPPC*TAPSFS
Trigger: AGAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATT...GGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp TTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGTTGTACAGCACGTTaGTCTCATATTTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: FQATDGTNTPRLPRCHCPGCTAR*SHISAV
Trigger: AACAGCAGAAATATGAGATCAACGTGCTGTACAACC...CGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR GCA 90 bp TCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCTTTCTCCATGCGCTTaGGGTGGATGTCATCGAAGT +
Preference number: 4 (lower is better)
Translates to: SEGSVYFKLPMGQTLPGFLSPCA*GGCHRS
Trigger: ACTTCGATGACATCCACCGCAAGCGCATGGAGAAAG...GAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCTTTCTCCATGCGCTTaGGGTGGATGTCATCGAAGT +
Preference number: 4 (lower is better)
Translates to: LFQATDGTNTPRLPRCHCLSPCA*GGCHRS
Trigger: ACTTCGATGACATCCACCGCAAGCGCATGGAGAAAG...ACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp TGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTCTTTCTCCATGCGCTTaGGGTGGATGTCATCGAAGT +
Preference number: 4 (lower is better)
Translates to: CLRGAFISSYRWDKHSQALSPCA*GGCHRS
Trigger: ACTTCGATGACATCCACCGCAAGCGCATGGAGAAAG...AGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp GGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTTCCTCCTTCTTCCGCTaGTCGAAATGTACATCGATG +
Preference number: 4 (lower is better)
Translates to: GSVYFKLPMGQTLPGFPGSSFFR*SKCTSM
Trigger: CATCGATGTACATTTCGAGCAGCGGAAGAAGGAGGA...ACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp GAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCATCCTCCTTCTTCCGCTaGTCGAAATGTACATCGATG +
Preference number: 4 (lower is better)
Translates to: EGSVYFKLPMGQTLPGFPSSFFR*SKCTSM
Trigger: CATCGATGTACATTTCGAGCAGCGGAAGAAGGAGGA...TGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CCA 90 bp GTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGCACCTTCTTTTTCTTaGCATCATCCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: VYFKLPMGQTLPGFPGATAPSFS*HHPLPA
Trigger: AGCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGC...AGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp CTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCAATGGGCCCCCATGTTaGACAGCACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LRGAFISSYRWDKHSQASNGPPC*TAPSFS
Trigger: AGAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATT...GGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp AGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCAATGGGCCCCCATGTTaGACAGCACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SVYFKLPMGQTLPGFPGANGPPC*TAPSFS
Trigger: AGAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATT...GGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTAATGGGCCCCCATGTTaGACAGCACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: GSVYFKLPMGQTLPGFPGNGPPC*TAPSFS
Trigger: AGAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATT...ACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCCTTATGACAAGTCCATaGGAACCTAGGCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VSEGSVYFKLPMGQTLPGLMTSP*EPRLCL
Trigger: CAGACACAGCCTAGGTTCCCATGGACTTGTCATAAG...GCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587758.5
CDS-3UTR TCA 90 bp CAGAGAACCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGAGGTTGTACAGCACGTTaGTCTCATATTTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QRTQRVSEGSVYFKLPMGGCTAR*SHISAV
Trigger: AACAGCAGAAATATGAGATCAACGTGCTGTACAACC...TCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR TCA 90 bp GGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTCCTCTTTTGTCTTATaGCAAGTCCATGGGAACCTA +
Preference number: 4 (lower is better)
Translates to: GERLFQATDGTNTPRLPRSSFVL*QVHGNL
Trigger: TAGGTTCCCATGGACTTGTCATAAGACAAAAGAGGA...CCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587758.5
CDS-3UTR GCA 90 bp TGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCTCCTTCTTCCGCTaGTCGAAATGTACATCGATG +
Preference number: 4 (lower is better)
Translates to: CLRGAFISSYRWDKHSQASSFFR*SKCTSM
Trigger: CATCGATGTACATTTCGAGCAGCGGAAGAAGGAGGA...AGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR GCA 90 bp GAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCCAGGAGAGACCAGCTaGATCTCAACCATAATAACA +
Preference number: 4 (lower is better)
Translates to: ERLFQATDGTNTPRLPRCPGETS*ISTIIT
Trigger: TGTTATTATGGTTGAGATGCAGCTGGTCTCTCCTGG...GCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588981.6
CDS-3UTR CCA 90 bp TTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGAATGGGCCCCCATGTTaGACAGCACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: FISSYRWDKHSQASQVPLNGPPC*TAPSFS
Trigger: AGAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATT...CAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CCA 90 bp GTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTAATGGGCCCCCATGTTaGACAGCACCTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: VYFKLPMGQTLPGFPGATNGPPC*TAPSFS
Trigger: AGAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATT...AGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCGGTTGTACAGCACGTTaGTCTCATATTTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVGCTAR*SHISAV
Trigger: AACAGCAGAAATATGAGATCAACGTGCTGTACAACC...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR TCA 90 bp CAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCGGTTGTACAGCACGTTaGTCTCATATTTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QRVSEGSVYFKLPMGQTLGCTAR*SHISAV
Trigger: AACAGCAGAAATATGAGATCAACGTGCTGTACAACC...GAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR TCA 90 bp AGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGGTTGTACAGCACGTTaGTCTCATATTTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RGAFISSYRWDKHSQASQGCTAR*SHISAV
Trigger: AACAGCAGAAATATGAGATCAACGTGCTGTACAACC...CTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
3UTR CAA 72 bp TTAATGATTATTGGTGACACTCTTTCAAGTAACTTGTaGGTAATAAGAAGTCAATTAACCAGGAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: LMIIGDTLSSNL*VIRSQLTRRDQ
Trigger: CTGGTCTCTCCTGGTTAATTGACTTCTTATTACCAACAAGTTACTTGAAAGAGTGTCACCAATAATCATTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588981.6
CDS GCA 90 bp GGGTCCCTCTGGCCTCGGCTGCGATGGGCACGTTCCCCCTGGCGGTaGAGGGATGGCGCGAGGAGACGCTCCAGACCCGGAGAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: GSLWPRLRWARSPWR*RDGARRRSRPGEGG
Trigger: CCCGCCCTCTCCGGGTCTGGAGCGTCTCCTCGCGCCATCCCTGCACCGCCAGGGGGAACGTGCCCATCGCAGCCGAGGCCAGAGGGACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585321.6
ENST00000587465.6
CDS CCA 90 bp GGACGGGGGTCCCTCTGGCCTCGGCTGCGATGGGCACGTTCCCCCTaGCGGTGCAGGGATGGCGCGAGGAGACGCTCCAGACCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: GRGSLWPRLRWARSP*RCRDGARRRSRPGE
Trigger: CTCTCCGGGTCTGGAGCGTCTCCTCGCGCCATCCCTGCACCGCCAGGGGGAACGTGCCCATCGCAGCCGAGGCCAGAGGGACCCCCGTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585321.6
ENST00000587465.6
CDS TCA 90 bp CCGACCTCCCTGAGCCACCTCCCACCTCCGGGATGTGCCGTCCAGTaGGGTAGCCGCCAGCCCCGGGAGGCTCCTGAACGTGGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: PTSLSHLPPPGCAVQ*GSRQPREAPERGGS
Trigger: GGACCCTCCACGTTCAGGAGCCTCCCGGGGCTGGCGGCTACCTCACTGGACGGCACATCCCGGAGGTGGGAGGTGGCTCAGGGAGGTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS GCA 90 bp CCAGGGTTCCAGTCTCTGCTGGACGGGGGTCCCTCTGGCCTCGGCTaGGATGGGCACGTTCCCCCTGGCGGTGCAGGGATGGCGCGAGGA +
Preference number: 5 (lower is better)
Translates to: PGFQSLLDGGPSGLG*DGHVPPGGAGMARG
Trigger: TCCTCGCGCCATCCCTGCACCGCCAGGGGGAACGTGCCCATCGCAGCCGAGGCCAGAGGGACCCCCGTCCAGCAGAGACTGGAACCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585321.6
ENST00000587465.6
CDS CCA 90 bp GTTCCAGTCTCTGCTGGACGGGGGTCCCTCTGGCCTCGGCTGCGATaGGCACGTTCCCCCTGGCGGTGCAGGGATGGCGCGAGGAGACGC +
Preference number: 5 (lower is better)
Translates to: VPVSAGRGSLWPRLR*ARSPWRCRDGARRR
Trigger: GCGTCTCCTCGCGCCATCCCTGCACCGCCAGGGGGAACGTGCCCATCGCAGCCGAGGCCAGAGGGACCCCCGTCCAGCAGAGACTGGAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585321.6
ENST00000587465.6
CDS CCA 90 bp GGAGGGATGGGGGCGGTGGCCAGAGACCAGGGTTCCAGTCTCTGCTaGACGGGGGTCCCTCTGGCCTCGGCTGCGATGGGCACGTTCCCC +
Preference number: 5 (lower is better)
Translates to: GGMGAVARDQGSSLC*TGVPLASAAMGTFP
Trigger: GGGGAACGTGCCCATCGCAGCCGAGGCCAGAGGGACCCCCGTCCAGCAGAGACTGGAACCCTGGTCTCTGGCCACCGCCCCCATCCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585321.6
ENST00000587465.6
CDS CCA 90 bp TGGCCAGAGACCAGGGTTCCAGTCTCTGCTGGACGGGGGTCCCTCTaGCCTCGGCTGCGATGGGCACGTTCCCCCTGGCGGTGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: WPETRVPVSAGRGSL*PRLRWARSPWRCRD
Trigger: ATCCCTGCACCGCCAGGGGGAACGTGCCCATCGCAGCCGAGGCCAGAGGGACCCCCGTCCAGCAGAGACTGGAACCCTGGTCTCTGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585321.6
ENST00000587465.6
CDS GCA 90 bp CAAAGGAGGCACCACGGGGCGGCTTGGTTTGGGGCGTTCCTCTTCTaGGGAGTCCGGGACCTCACCTTCCTCCTCCTCCTCCGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: QRRHHGAAWFGAFLF*GVRDLTFLLLLRSL
Trigger: GAGGCTGCGGAGGAGGAGGAGGAAGGTGAGGTCCCGGACTCCGCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588147.5
CDS CCA 90 bp GGCACCACGGGGCGGCTGAGTGGACAGAAACACAGAGACCATGAGTaGCCCGACCTCCCTGAGCCACCTCCCACCTCCGGGATGTGCCGT +
Preference number: 5 (lower is better)
Translates to: GTTGRLSGQKHRDHE*PDLPEPPPTSGMCR
Trigger: ACGGCACATCCCGGAGGTGGGAGGTGGCTCAGGGAGGTCGGGCCACTCATGGTCTCTGTGTTTCTGTCCACTCAGCCGCCCCGTGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CAA 90 bp CTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCACGGGGCGGCTTGGTTaGGGGCGTTCCTCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: LPMGQTLPGFPGATVRGGTGRLG*GRSSSG
Trigger: GCCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGT...GCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
CDS GCA 90 bp TCTTCGGGGGCTTCCTCCTCCTCCTCCGCAGCCTCCTCTTCCGGCTaGTCCCCCTCCCAGTGCAGCACTCACTCCTCATATTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SSGASSSSSAASSSG*SPSQCSTHSSYSCS
Trigger: GGAGCAGGAATATGAGGAGTGAGTGCTGCACTGGGAGGGGGAGCAGCCGGAAGAGGAGGCTGCGGAGGAGGAGGAGGAAGCCCCCGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592920.5
CDS GCA 90 bp CCTCCTCCTCCGCAGCCTCCTTCCGGCTGCTCCTCCTCATATTCCTaGTCCTCGGTGTCCGACATCCTGGTGCGGCCTAGGCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: PPPPQPPSGCSSSYS*SSVSDILVRPRLCL
Trigger: CAGACACAGCCTAGGCCGCACCAGGATGTCGGACACCGAGGAGCAGGAATATGAGGAGGAGCAGCCGGAAGGAGGCTGCGGAGGAGGAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586282.1
CDS GCA 90 bp GCTCTTCGGGGGCTTCCTCCTCCTCCTCCGCAGCCTCCTTCCGGCTaGTCCTCCTCATATTCCTGCTCCTCGGTGTCCGACATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: ALRGLPPPPPQPPSG*SSSYSCSSVSDILV
Trigger: CACCAGGATGTCGGACACCGAGGAGCAGGAATATGAGGAGGAGCAGCCGGAAGGAGGCTGCGGAGGAGGAGGAGGAAGCCCCCGAAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586282.1
CDS-3UTR CAA 90 bp AGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGACGGGGCGGCTTGGTTaGGGGCGTTCCTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SYRWDKHSQASQVPLSGATGRLG*GRSSSS
Trigger: GGAAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGT...CGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
CDS GCA 90 bp TCTTCGGGGGCTTCCTCCTCCTCCTCCGCAGCCTCCTCTTCCGGCTaGTCCTCCTCATATTCCTGCTCCTCGGTGTCCGACATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: SSGASSSSSAASSSG*SSSYSCSSVSDILV
Trigger: CACCAGGATGTCGGACACCGAGGAGCAGGAATATGAGGAGGAGCAGCCGGAAGAGGAGGCTGCGGAGGAGGAGGAGGAAGCCCCCGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291901.12
ENST00000588981.6
ENST00000593046.5
CDS GCA 90 bp GGGACCTCACCTTCCTCCTCCTCCTCCGCAGCCTCCTCTTCCGGCTaGTCCTCCTCATATTCCTGCTCCTCGGTGTCCGACATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: GTSPSSSSSAASSSG*SSSYSCSSVSDILV
Trigger: CACCAGGATGTCGGACACCGAGGAGCAGGAATATGAGGAGGAGCAGCCGGAAGAGGAGGCTGCGGAGGAGGAGGAGGAAGGTGAGGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588147.5
CDS CCA 90 bp GGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTTCCTCCTCCTCCTCCGCAGCCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: GSLAGSKEAPRGGLV*GVPLLPPPPPQPPL
Trigger: GAGAGGAGGCTGCGGAGGAGGAGGAGGAAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536926.5
CDS CCA 90 bp GGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTTCCTCCTCCTCCTCCGCAGCCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: GSLAGSKEAPRGGLV*GVPLLPPPPPQPPL
Trigger: CAGAGGAGGCTGCGGAGGAGGAGGAGGAAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585321.6
CDS CCA 90 bp GGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTGCGGAGTCCGGGACCTCACCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GSLAGSKEAPRGGLV*GVPLLRSPGPHLPP
Trigger: AGGAGGAAGGTGAGGTCCCGGACTCCGCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588147.5
CDS-3UTR CAA 90 bp CGGCATCCTCACTTCCAGCGGCCTCCAACGCGGCCCTTCCCTGCCCCCTTCCGGAAATGGGCCCCCATGTaGGACAGCACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: RHPHFQRPPTRPFPAPFRKWAPM*DSTFFF
Trigger: GAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATTT...CCGGAAGGGGGCAGGGAAGGGCCGCGTTGGAGGCCGCTGGAAGTGAGGATGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS GCA 90 bp CGCGTTCCTTCTTCCTCCTCCTCCTCCGCAGCCTCCTCTTCCGGCTaGTCCTCCTCATATTCCTGCTCCTCGGTGTCCGACATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: RVPSSSSSSAASSSG*SSSYSCSSVSDILV
Trigger: CACCAGGATGTCGGACACCGAGGAGCAGGAATATGAGGAGGAGCAGCCGGAAGAGGAGGCTGCGGAGGAGGAGGAGGAAGAAGGAACGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588426.5
CDS GCA 90 bp CCTGGTGCGGCCTTGGTAGGTGTGGTCCTGGCACAGCCAGGAGGCTaGAGACCCTGCCCCCTCAGCACAGCTGTCCTCTTTTGTCTTATG +
Preference number: 5 (lower is better)
Translates to: PGAALVGVVLAQPGG*RPCPLSTAVLFCLM
Trigger: CATAAGACAAAAGAGGACAGCTGTGCTGAGGGGGCAGGGTCTGCAGCCTCCTGGCTGTGCCAGGACCACACCTACCAAGGCCGCACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587758.5
CDS CCA 90 bp CATGCGCTTGCGGTGGATGTCATCGAAGTCAACGCGCTCCCCTTCTaGGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTTGG +
Preference number: 5 (lower is better)
Translates to: HALAVDVIEVNALPF*DLWRDQRRHHGAAW
Trigger: CCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGGGAGCGCGTTGACTTCGATGACATCCACCGCAAGCGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000585321.6
ENST00000587465.6
ENST00000587758.5
ENST00000588147.5
ENST00000588981.6
ENST00000589226.5
ENST00000592920.5
ENST00000593046.5
CDS CCA 90 bp GGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTTCCTCCTCCTCCTCCGCAGCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GSLAGSKEAPRGGLV*GVPLLPPPPPQPPL
Trigger: AAGAGGAGGCTGCGGAGGAGGAGGAGGAAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356783.9
ENST00000587758.5
ENST00000589226.5
CDS CCA 90 bp CATGCGCTTGCGGTGGATGTCATCGAAGTCAACGCGCTCCCCTTCTaGGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTGAG +
Preference number: 5 (lower is better)
Translates to: HALAVDVIEVNALPF*DLWRDQRRHHGAAE
Trigger: CTCAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGGGAGCGCGTTGACTTCGATGACATCCACCGCAAGCGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS CCA 90 bp TTCTGGGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTTaGTTTGGGGCGTTCCTCTTCTGCGGAGTCCGGGACCTCACCTTC +
Preference number: 5 (lower is better)
Translates to: FWDLWRDQRRHHGAA*FGAFLFCGVRDLTF
Trigger: GAAGGTGAGGTCCCGGACTCCGCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588147.5
CDS-3UTR CAA 90 bp CCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCGCGTGGCTGATGCGGTaGTACAGCACGTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: PMGQTLPGFPGATVRGGIAWLMR*YSTLIS
Trigger: TGAGATCAACGTGCTGTACAACCGCATCAGCCACGC...GATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS TCA 90 bp CTTCTGGGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTaGGTGGACAGAAACACAGAGACCATGAGTGGCCCGACCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LLGSLAGSKEAPRGG*VDRNTETMSGPTSL
Trigger: CAGGGAGGTCGGGCCACTCATGGTCTCTGTGTTTCTGTCCACTCAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS GCA 90 bp CGTTCCTCTTCTTCCTCCTCCTCCTCCGCAGCCTCCTCTTCCGGCTaGTCCTCCTCATATTCCTGCTCCTCGGTGTCCGACATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: RSSSSSSSSAASSSG*SSSYSCSSVSDILV
Trigger: CACCAGGATGTCGGACACCGAGGAGCAGGAATATGAGGAGGAGCAGCCGGAAGAGGAGGCTGCGGAGGAGGAGGAGGAAGAAGAGGAACG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356783.9
ENST00000587758.5
ENST00000589226.5
CDS-3UTR CAA 90 bp CCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCAGCACCTTCTTTTTCTaGGCATCATCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PMGQTLPGFPGATVRGGISTFFF*ASSSAR
Trigger: GCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGCT...GATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp CGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCCAGCACCTTCTTTTTCTaGGCATCATCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: RWDKHSQASQVPLSGAASSTFFF*ASSSAR
Trigger: GCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGCT...GGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp GAGGCTTCTTACGCTCGGAGAGGATGCGCACCTTCATCTCCCGCCCCGTCTGCCGCGTGGCTGATGCGGTaGTACAGCACGTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: EASYARRGCAPSSPAPSAAWLMR*YSTLIS
Trigger: TGAGATCAACGTGCTGTACAACCGCATCAGCCACGC...GGCAGACGGGGCGGGAGATGAAGGTGCGCATCCTCTCCGAGCGTAAGAAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS GCA 90 bp TTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTaGCACTGTCCGGGGCGGCATCCTCACTTCCAGCGGCCTCCAACG +
Preference number: 5 (lower is better)
Translates to: LFQATDGTNTPRLPR*HCPGRHPHFQRPPT
Trigger: CGTTGGAGGCCGCTGGAAGTGAGGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS GCA 90 bp GCGTTCCTCTTCTTCCTCCTCCTCCTCCGCAGCCTCCTCTCCCAGTaGAGCACTCACTCCTCATATTCCTGCTCCTCGGTGTCCGACATC +
Preference number: 5 (lower is better)
Translates to: AFLFFLLLLRSLLSQ*STHSSYSCSSVSDI
Trigger: GATGTCGGACACCGAGGAGCAGGAATATGAGGAGTGAGTGCTGCACTGGGAGAGGAGGCTGCGGAGGAGGAGGAGGAAGAAGAGGAACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536926.5
CDS-3UTR CAA 90 bp AGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGAGCACCTTCTTTTTCTaGGCATCATCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: SYRWDKHSQASQVPLSGASTFFF*ASSSAR
Trigger: GCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGCT...CGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp GCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGAAATGGGCCCCCATGTaGGACAGCACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ATDGTNTPRLPRCHCPGRKWAPM*DSTFFF
Trigger: GAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATTT...CCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp GAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAACGGGGCGGCTTGGTTaGGGGCGTTCCTCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: EGSVYFKLPMGQTLPGFPTGRLG*GRSSSG
Trigger: GCCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGT...TGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
CDS-3UTR CAA 90 bp GCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCAACGGGGCGGCTTGGTTaGGGGCGTTCCTCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: AFISSYRWDKHSQASQVPTGRLG*GRSSSG
Trigger: GCCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGT...TGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
CDS-3UTR CAA 90 bp CGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGCACCACGGGGCGGCTaGGTTTGGGGCGTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RVSEGSVYFKLPMGQTLPAPRGG*VWGVPL
Trigger: AAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGC...TGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CAA 90 bp ACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATAAATGGGCCCCCATGTaGGACAGCACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: TDGTNTPRLPRCHCPGRHKWAPM*DSTFFF
Trigger: GAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATTT...ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp TCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGTGGCTGATGCGGTaGTACAGCACGTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: SSYRWDKHSQASQVPLSGAWLMR*YSTLIS
Trigger: TGAGATCAACGTGCTGTACAACCGCATCAGCCACGC...CCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp TTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTGCACCACGGGGCGGCTaGGTTTGGGGCGTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: LFQATDGTNTPRLPRCHCAPRGG*VWGVPL
Trigger: AAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGC...ACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CAA 90 bp TCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGAGCACCTTCTTTTTCTaGGCATCATCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: SSYRWDKHSQASQVPLSGSTFFF*ASSSAR
Trigger: GCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGCT...CCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp CAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGAAATGGGCCCCCATGTaGGACAGCACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: QATDGTNTPRLPRCHCPGKWAPM*DSTFFF
Trigger: GAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATTT...CCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp GCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCGGTTGTACAGCACGTaGATCTCATATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: ATDGTNTPRLPRCHCPGRRLYST*ISYFCC
Trigger: ACAGCAGAAATATGAGATCAACGTGCTGTACAACCG...CCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCATCCTGGTGCGGCCTaGGTAGGTGTGGTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVHPGAA*VGVVLA
Trigger: TGCCAGGACCACACCTACCAAGGCCGCACCAGGATG...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587758.5
CDS-3UTR CAA 90 bp GGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGCCCCTTCTGGGATCTTaGGCGGGATCAAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GERLFQATDGTNTPRLPRPLLGS*AGSKEA
Trigger: TGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGGG...CCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CAA 90 bp ATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCCCCCTTCTGGGATCTTaGGCGGGATCAAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: ISSYRWDKHSQASQVPLSPLLGS*AGSKEA
Trigger: TGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGGG...GGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CAA 90 bp TTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGAGCACCTTCTTTTTCTaGGCATCATCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: FKLPMGQTLPGFPGATVRSTFFF*ASSSAR
Trigger: GCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGCT...CCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp TCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGAAATGGGCCCCCATGTaGGACAGCACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: SSYRWDKHSQASQVPLSGKWAPM*DSTFFF
Trigger: GAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATTT...CCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp ACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGCATCGGTTGTACAGCACGTaGATCTCATATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: TDGTNTPRLPRCHCPGRHRLYST*ISYFCC
Trigger: ACAGCAGAAATATGAGATCAACGTGCTGTACAACCG...ATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp TTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGACGGGGCGGCTTGGTTaGGGGCGTTCCTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: FISSYRWDKHSQASQVPLTGRLG*GRSSSS
Trigger: GGAAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGT...CAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
CDS-3UTR CAA 90 bp TTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTACGGGGCGGCTTGGTTaGGGGCGTTCCTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LFQATDGTNTPRLPRCHCTGRLG*GRSSSS
Trigger: GGAAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGT...ACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356783.9
ENST00000536926.5
ENST00000587758.5
CDS-3UTR CAA 90 bp CATGTAGTCAATGTCCAGAGGCTTCTTACGCTCGGAGAGGATGCGCACCTTCATCCAGCTGAGGCGGGCTaGGTTTGGGGCGTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: HVVNVQRLLTLGEDAHLHPAEAG*VWGVPL
Trigger: AAGAGGAACGCCCCAAACCAAGCCCGCCTCAGCTGG...ATGAAGGTGCGCATCCTCTCCGAGCGTAAGAAGCCTCTGGACATTGACTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CAA 90 bp GCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACCCCTTCTGGGATCTTaGGCGGGATCAAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: AFISSYRWDKHSQASQVPPLLGS*AGSKEA
Trigger: TGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGGG...TGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CAA 90 bp CTCCTTCTTCCGCTGCTCGAAATGTACATCGATGAGTGTCTGCAGCTCCAGCAGCCCCTTCTGGGATCTTaGGCGGGATCAAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LLLPLLEMYIDECLQLQQPLLGS*AGSKEA
Trigger: TGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGGG...CTGCTGGAGCTGCAGACACTCATCGATGTACATTTCGAGCAGCGGAAGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CAA 90 bp GGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCCCTTCTGGGATCTTaGGCGGGATCAAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GAFISSYRWDKHSQASQVPLLGS*AGSKEA
Trigger: TGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGGG...CACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CAA 90 bp AAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCCGGTTGTACAGCACGTaGATCTCATATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: KLPMGQTLPGFPGATVRGRLYST*ISYFCC
Trigger: ACAGCAGAAATATGAGATCAACGTGCTGTACAACCG...GCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp CAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGGGCGGTTGTACAGCACGTaGATCTCATATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: QATDGTNTPRLPRCHCPGRLYST*ISYFCC
Trigger: ACAGCAGAAATATGAGATCAACGTGCTGTACAACCG...CCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp GGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGGCGTGGCTGATGCGGTaGTACAGCACGTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: GERLFQATDGTNTPRLPRAWLMR*YSTLIS
Trigger: TGAGATCAACGTGCTGTACAACCGCATCAGCCACGC...CCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp TTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCCCTTCTGGGATCTTaGGCGGGATCAAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LFQATDGTNTPRLPRCHCPLLGS*AGSKEA
Trigger: TGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGGG...ACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CAA 90 bp TGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTCCCCTTCTGGGATCTTaGGCGGGATCAAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: CLRGAFISSYRWDKHSQAPLLGS*AGSKEA
Trigger: TGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGGG...AGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588981.6
CDS-3UTR CAA 90 bp CCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACAGCACCTTCTTTTTCTaGGCATCATCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PSGCLRGAFISSYRWDKHSTFFF*ASSSAR
Trigger: GCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGCT...GTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR CAA 90 bp AGAACCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAGCGTGGCTGATGCGGTaGTACAGCACGTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: RTQRVSEGSVYFKLPMGQAWLMR*YSTLIS
Trigger: TGAGATCAACGTGCTGTACAACCGCATCAGCCACGC...TTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR CAA 90 bp AGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCGCGTGGCTGATGCGGTaGTACAGCACGTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: SVYFKLPMGQTLPGFPGAAWLMR*YSTLIS
Trigger: TGAGATCAACGTGCTGTACAACCGCATCAGCCACGC...GGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp CGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACGCGTGGCTGATGCGGTaGTACAGCACGTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: RLFQATDGTNTPRLPRCHAWLMR*YSTLIS
Trigger: TGAGATCAACGTGCTGTACAACCGCATCAGCCACGC...GTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp CCGCTGCTCGAAATGTACATCGATGAGTGTCTGCAGCTCCAGCAGGTCTTTCTCAGCACCTTCTTTTTCTaGGCATCATCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PLLEMYIDECLQLQQVFLSTFFF*ASSSAR
Trigger: GCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGCT...GAGAAAGACCTGCTGGAGCTGCAGACACTCATCGATGTACATTTCGAGCAGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CAA 90 bp CGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAAGCACCTTCTTTTTCTaGGCATCATCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: RVSEGSVYFKLPMGQTLPSTFFF*ASSSAR
Trigger: GCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGCT...TGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000593194.5
CDS-3UTR CAA 90 bp GGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTAGCACCTTCTTTTTCTaGGCATCATCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: GSVYFKLPMGQTLPGFPGSTFFF*ASSSAR
Trigger: GCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGCT...ACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp TTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGGCGGTTGTACAGCACGTaGATCTCATATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: FKLPMGQTLPGFPGATVRRLYST*ISYFCC
Trigger: ACAGCAGAAATATGAGATCAACGTGCTGTACAACCG...CCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp TTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTGCGTGGCTGATGCGGTaGTACAGCACGTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: LFQATDGTNTPRLPRCHCAWLMR*YSTLIS
Trigger: TGAGATCAACGTGCTGTACAACCGCATCAGCCACGC...ACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp GTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTAGCACCTTCTTTTTCTaGGCATCATCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: VYFKLPMGQTLPGFPGATSTFFF*ASSSAR
Trigger: GCGGGCAGAGGATGATGCCAAGAAAAAGAAGGTGCT...AGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp AGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCAAATGGGCCCCCATGTaGGACAGCACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: SVYFKLPMGQTLPGFPGAKWAPM*DSTFFF
Trigger: GAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATTT...GGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp GGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGAAATGGGCCCCCATGTaGGACAGCACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: GAFISSYRWDKHSQASQVKWAPM*DSTFFF
Trigger: GAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATTT...CACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp TATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCAAATGGGCCCCCATGTaGGACAGCACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: YFKLPMGQTLPGFPGATVKWAPM*DSTFFF
Trigger: GAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATTT...GACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp CTTCTCCTCCGCCAGCTTAGCCTGACGTTCGCGTTCCTTCTCAGTTCTGAAGCGCGGTTGTACAGCACGTaGATCTCATATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: LLLRQLSLTFAFLLSSEARLYST*ISYFCC
Trigger: ACAGCAGAAATATGAGATCAACGTGCTGTACAACCG...CGCTTCAGAACTGAGAAGGAACGCGAACGTCAGGCTAAGCTGGCGGAGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS-3UTR CAA 90 bp TTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTGTCCGCACAGCTGTCCTCTTTaGTCTTATGACAAGTCCATG +
Preference number: 5 (lower is better)
Translates to: FQATDGTNTPRLPRCHCPHSCPL*SYDKSM
Trigger: CATGGACTTGTCATAAGACAAAAGAGGACAGCTGTG...CGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587758.5
CDS-3UTR CAA 90 bp GTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTAAATGGGCCCCCATGTaGGACAGCACCTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: VYFKLPMGQTLPGFPGATKWAPM*DSTFFF
Trigger: GAAAAAGAAGGTGCTGTCCAACATGGGGGCCCATTT...AGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp CAGAGAACCCAGCGGGTGTCTGAGGGGAGCGTTTATTTCAAGCTACCGATGGGACGGTTGTACAGCACGTaGATCTCATATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: QRTQRVSEGSVYFKLPMGRLYST*ISYFCC
Trigger: ACAGCAGAAATATGAGATCAACGTGCTGTACAACCG...TCCCATCGGTAGCTTGAAATAAACGCTCCCCTCAGACACCCGCTGGGTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
CDS-3UTR CAA 90 bp AGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCCGGTTGTACAGCACGTaGATCTCATATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SVYFKLPMGQTLPGFPGARLYST*ISYFCC
Trigger: ACAGCAGAAATATGAGATCAACGTGCTGTACAACCG...GGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS-3UTR CAA 90 bp GAGGGGAGCGTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCACGGTTGTACAGCACGTaGATCTCATATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: EGSVYFKLPMGQTLPGFPRLYST*ISYFCC
Trigger: ACAGCAGAAATATGAGATCAACGTGCTGTACAACCG...TGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAACGCTCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS GCA 90 bp GGAGGAGAAATGTCGACTGCTGTTTCAATTTCCTCCCTCCATCTCTaGCTTTCTCACACCTTGTCTCTGGGGGTAGAGGGAATATTTAGG +
Preference number: 5 (lower is better)
Translates to: GGEMSTAVSISSLHL*LSHTLSLGVEGIFR
Trigger: CCTAAATATTCCCTCTACCCCCAGAGACAAGGTGTGAGAAAGGCAGAGATGGAGGGAGGAAATTGAAACAGCAGTCGACATTTCTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586282.1
CDS-3UTR CAA 90 bp GTTTATTTCAAGCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTGCCACTCGGTTGTACAGCACGTaGATCTCATATTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: VYFKLPMGQTLPGFPGATRLYST*ISYFCC
Trigger: ACAGCAGAAATATGAGATCAACGTGCTGTACAACCG...AGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGCTTGAAATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS GCA 72 bp TGGCCTCGGCTGCGATGGGCACGTTCCCCCTGGCGGTaGAGGGATGGCGCGAGGAGACGCTCCAGACCCGGA +
Preference number: 6 (lower is better)
Translates to: WPRLRWARSPWR*RDGARRRSRPG
Trigger: TCCGGGTCTGGAGCGTCTCCTCGCGCCATCCCTGCACCGCCAGGGGGAACGTGCCCATCGCAGCCGAGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585321.6
ENST00000587465.6
CDS CCA 72 bp GGGGCGGTGGCCAGAGACCAGGGTTCCAGTCTCTGCTaGACGGGGGTCCCTCTGGCCTCGGCTGCGATGGGC +
Preference number: 6 (lower is better)
Translates to: GAVARDQGSSLC*TGVPLASAAMG
Trigger: GCCCATCGCAGCCGAGGCCAGAGGGACCCCCGTCCAGCAGAGACTGGAACCCTGGTCTCTGGCCACCGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585321.6
ENST00000587465.6
CDS GCA 72 bp CAGTCTCTGCTGGACGGGGGTCCCTCTGGCCTCGGCTaGGATGGGCACGTTCCCCCTGGCGGTGCAGGGATG +
Preference number: 6 (lower is better)
Translates to: QSLLDGGPSGLG*DGHVPPGGAGM
Trigger: CATCCCTGCACCGCCAGGGGGAACGTGCCCATCGCAGCCGAGGCCAGAGGGACCCCCGTCCAGCAGAGACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585321.6
ENST00000587465.6
CDS CCA 72 bp TCCCTCTGGCCTCGGCTGCGATGGGCACGTTCCCCCTaGCGGTGCAGGGATGGCGCGAGGAGACGCTCCAGA +
Preference number: 6 (lower is better)
Translates to: SLWPRLRWARSP*RCRDGARRRSR
Trigger: TCTGGAGCGTCTCCTCGCGCCATCCCTGCACCGCCAGGGGGAACGTGCCCATCGCAGCCGAGGCCAGAGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585321.6
ENST00000587465.6
CDS CCA 72 bp ACCAGGGTTCCAGTCTCTGCTGGACGGGGGTCCCTCTaGCCTCGGCTGCGATGGGCACGTTCCCCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: TRVPVSAGRGSL*PRLRWARSPWR
Trigger: CCGCCAGGGGGAACGTGCCCATCGCAGCCGAGGCCAGAGGGACCCCCGTCCAGCAGAGACTGGAACCCTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585321.6
ENST00000587465.6
CDS CCA 72 bp GCGGGATCAAAGGAGGCACCACGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTGGCTCTGCCACCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: AGSKEAPRGGLV*GVPLLALPPAP
Trigger: CGGAGCCGGTGGCAGAGCCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
ENST00000592920.5
ENST00000593046.5
CDS CCA 72 bp GCTCCTGAACGTGGAGGGTCCCAGCTGAGGCGGGCTTaGTTTGGGGCGTTCCTCTTCTGGCTCTGCCACCGG +
Preference number: 6 (lower is better)
Translates to: APERGGSQLRRA*FGAFLFWLCHR
Trigger: CCGGTGGCAGAGCCAGAAGAGGAACGCCCCAAACCAAGCCCGCCTCAGCTGGGACCCTCCACGTTCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS CCA 72 bp GGGCGGCTGAGTGGACAGAAACACAGAGACCATGAGTaGCCCGACCTCCCTGAGCCACCTCCCACCTCCGGG +
Preference number: 6 (lower is better)
Translates to: GRLSGQKHRDHE*PDLPEPPPTSG
Trigger: CCCGGAGGTGGGAGGTGGCTCAGGGAGGTCGGGCCACTCATGGTCTCTGTGTTTCTGTCCACTCAGCCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587089.6
CDS CCA 72 bp GCGGGATCAAAGGAGGCACCACGGGGCGGCTTGGTTTaGGGCGTTCCTCTTCTGCGGAGTCCGGGACCTCAC +
Preference number: 6 (lower is better)
Translates to: AGSKEAPRGGLV*GVPLLRSPGPH
Trigger: GTGAGGTCCCGGACTCCGCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588147.5
CDS CAA 72 bp GGCGGGATCAAAGGAGGCACCACGGGGCGGCTTGGTTaGGGGCGTTCCTCTTCTGCGGAGTCCGGGACCTCA +
Preference number: 6 (lower is better)
Translates to: GGIKGGTTGRLG*GRSSSAESGTS
Trigger: TGAGGTCCCGGACTCCGCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588147.5
CDS GCA 72 bp GCTACCGATGGGACAAACACTCCCAGGCTTCCCAGGTaGCACTGTCCGGGGCGGCATCCTCACTTCCAGCGG +
Preference number: 6 (lower is better)
Translates to: ATDGTNTPRLPR*HCPGRHPHFQR
Trigger: CCGCTGGAAGTGAGGATGCCGCCCCGGACAGTGGCACCTGGGAAGCCTGGGAGTGTTTGTCCCATCGGTAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000587465.6
ENST00000587758.5
ENST00000588426.5
ENST00000588981.6
ENST00000589745.5
ENST00000593194.5
CDS GCA 72 bp CCGCAGCCTCCTTCCGGCTGCTCCTCCTCATATTCCTaGTCCTCGGTGTCCGACATCCTGGTGCGGCCTAGG +
Preference number: 6 (lower is better)
Translates to: PQPPSGCSSSYS*SSVSDILVRPR
Trigger: CCTAGGCCGCACCAGGATGTCGGACACCGAGGAGCAGGAATATGAGGAGGAGCAGCCGGAAGGAGGCTGCGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586282.1
CDS CCA 72 bp CTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTTaGTTTGGGGCGTTCCTCTTCTGGCTCTGCCACCGG +
Preference number: 6 (lower is better)
Translates to: LWRDQRRHHGAA*FGAFLFWLCHR
Trigger: CCGGTGGCAGAGCCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
ENST00000592920.5
ENST00000593046.5
CDS CCA 72 bp CTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTTaGTTTGGGGCGTTCCTCTTCTGCGGAGTCCGGGAC +
Preference number: 6 (lower is better)
Translates to: LWRDQRRHHGAA*FGAFLFCGVRD
Trigger: GTCCCGGACTCCGCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588147.5
CDS CAA 90 bp CTTCTGGGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTaGGTTTGGGGCGTTCCTCTTCTGGCTCTGCCACCGGCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: LLGSLAGSKEAPRGG*VWGVPLLALPPAPA
Trigger: AGCCGGAGCCGGTGGCAGAGCCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
ENST00000592920.5
ENST00000593046.5
CDS CAA 90 bp GGGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTTGGTTaGGGGCGTTCCTCTTCTGCGGAGTCCGGGACCTCACCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: GIFGGIKGGTTGRLG*GRSSSAESGTSPSS
Trigger: GGAGGAAGGTGAGGTCCCGGACTCCGCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588147.5
CDS CAA 72 bp TCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTaGGTTTGGGGCGTTCCTCTTCTGGCTCTGCCACCG +
Preference number: 6 (lower is better)
Translates to: SLAGSKEAPRGG*VWGVPLLALPP
Trigger: CGGTGGCAGAGCCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291901.12
ENST00000587465.6
ENST00000588981.6
ENST00000592920.5
ENST00000593046.5
CDS CAA 72 bp TCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTaGGTTTGGGGCGTTCCTCTTCTGCGGAGTCCGGGA +
Preference number: 6 (lower is better)
Translates to: SLAGSKEAPRGG*VWGVPLLRSPG
Trigger: TCCCGGACTCCGCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588147.5
CDS CAA 90 bp GGGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTTGGTTaGGGGCGTTCCTCTTCTTCCTCCTCCTCCTCCGCAGCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: GIFGGIKGGTTGRLG*GRSSSSSSSSAASS
Trigger: AGAGGAGGCTGCGGAGGAGGAGGAGGAAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356783.9
ENST00000536926.5
ENST00000585321.6
ENST00000587758.5
ENST00000589226.5
CDS CAA 90 bp CTTCTGGGATCTTTGGCGGGATCAAAGGAGGCACCACGGGGCGGCTaGGTTTGGGGCGTTCCTCTTCTGCGGAGTCCGGGACCTCACCTT +
Preference number: 6 (lower is better)
Translates to: LLGSLAGSKEAPRGG*VWGVPLLRSPGPHL
Trigger: AAGGTGAGGTCCCGGACTCCGCAGAAGAGGAACGCCCCAAACCAAGCCGCCCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588147.5
CDS GCA 72 bp CTCCTCTCCCAGTGCAGCACTCACTCCTCATATTCCTaGTCCTCGGTGTCCGACATCCTGGTGCGGCCTAGG +
Preference number: 6 (lower is better)
Translates to: LLSQCSTHSSYS*SSVSDILVRPR
Trigger: CCTAGGCCGCACCAGGATGTCGGACACCGAGGAGCAGGAATATGAGGAGTGAGTGCTGCACTGGGAGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536926.5
CDS CCA 72 bp GCGGTGGATGTCATCGAAGTCAACGCGCTCCCCTTCTaGGATCTTTGGCGGGATCAAAGGAGGCACCACGGG +
Preference number: 6 (lower is better)
Translates to: AVDVIEVNALPF*DLWRDQRRHHG
Trigger: CCCGTGGTGCCTCCTTTGATCCCGCCAAAGATCCCAGAAGGGGAGCGCGTTGACTTCGATGACATCCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000291901.12
ENST00000356783.9
ENST00000536926.5
ENST00000585321.6
ENST00000587089.6
ENST00000587465.6
ENST00000587758.5
ENST00000588147.5
ENST00000588981.6
ENST00000589226.5
ENST00000592920.5
ENST00000593046.5
CDS CCA 72 bp TTCCTCTTCTTCCTCCTCCTCCTCCGCAGCCTCCTCTaGAGATGGGGGCACAGAAGAGAAGGCGTTAGGAGC +
Preference number: 6 (lower is better)
Translates to: FLFFLLLLRSLL*RWGHRREGVRS
Trigger: GCTCCTAACGCCTTCTCTTCTGTGCCCCCATCTCCAGAGGAGGCTGCGGAGGAGGAGGAGGAAGAAGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585321.6
CDS CCA 72 bp CTGGGTGACAGAGCGAGACGCAGTAACTTCTGGGCGTaGCTGATGCGGTTGTACAGCACGTTGATCTCATAT +
Preference number: 6 (lower is better)
Translates to: LGDRARRSNFWA*LMRLYSTLISY
Trigger: ATATGAGATCAACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGTTACTGCGTCTCGCTCTGTCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586649.2
CDS CAA 72 bp GCGAGACGCAGTAACTTCTGGGCGTGGCTGATGCGGTaGTACAGCACGTTGATCTCATATTTCTGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: ARRSNFWAWLMR*YSTLISYFCCF
Trigger: GAAACAGCAGAAATATGAGATCAACGTGCTGTACAACCGCATCAGCCACGCCCAGAAGTTACTGCGTCTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586649.2