Pregenerated sensors for TNNI3 (Homo sapiens)
Ensembl gene IDs: ENSG00000129991Ensembl transcript IDs: ENST00000344887.10, ENST00000585806.5, ENST00000586446.1, ENST00000586669.5, ENST00000587176.5, ENST00000588882.1, ENST00000589864.1, ENST00000590463.1, ENST00000665070.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTCCGCGAAGCCCAGCCCGGCCAACTCCAGCGGCTGGCAGCGGGTaGTCAGAGCGCGCCCCTTCTCTCCGCGCCGCTCCTCCGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: APRSPARPTPAAGSG*SERAPSLRAAPPPL Trigger: GAGAGGCGGAGGAGCGGCGCGGAGAGAAGGGGCGCGCTCTGAGCACCCGCTGCCAGCCGCTGGAGTTGGCCGGGCTGGGCTTCGCGGAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000586669.5 ENST00000587176.5 ENST00000588882.1 ENST00000590463.1 ENST00000665070.1 |
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| CDS CCA 90 bp | AAGTCCTGCAGCTCCGCGAAGCCCAGCCCGGCCAACTCCAGCGGCTaGCAGCGGGTGCTCAGAGCGCGCCCCTTCTCTCCGCGCCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: KSCSSAKPSPANSSG*QRVLRARPFSPRRS Trigger: GGAGCGGCGCGGAGAGAAGGGGCGCGCTCTGAGCACCCGCTGCCAGCCGCTGGAGTTGGCCGGGCTGGGCTTCGCGGAGCTGCAGGACTT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000586669.5 ENST00000587176.5 ENST00000588882.1 ENST00000590463.1 ENST00000665070.1 |
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| CDS GCA 90 bp | GCCCGCAGGTCCAGGGACTCCTTAGCCCGGGCCCCCAGCAGCGCCTaGATCATGGCATCTGCAGAGATCCTCACTCTCCGCAGGGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: ARRSRDSLARAPSSA*IMASAEILTLRRVG Trigger: GCCCACCCTGCGGAGAGTGAGGATCTCTGCAGATGCCATGATGCAGGCGCTGCTGGGGGCCCGGGCTAAGGAGTCCCTGGACCTGCGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000588882.1 ENST00000589864.1 ENST00000665070.1 |
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| CDS CCA 90 bp | CGGCTCCGTGGCATAAGCGCGGTAGTTGGAGGAGCGGCGTCTGATTaGGGCTGGTGCAGGGCGAGGTTCCCTAGCCCTGGCCCTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: RLRGISAVVGGAASD*GWCRARFPSPGPGG Trigger: ACCCCCAGGGCCAGGGCTAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCTTATGCCACGGAGCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000586669.5 ENST00000590463.1 |
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| CDS TCA 90 bp | GCAGGGCGAGGTTCCCTTGGGGCATCACTCACCCATCCGCCATGCTaGGACTCAGGCCGGGAATGGCAGGAGGCAGGGCGAGGACAGGGG | + |
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Preference number: 5 (lower is better) Translates to: AGRGSLGASLTHPPC*DSGREWQEAGRGQG Trigger: CCCCTGTCCTCGCCCTGCCTCCTGCCATTCCCGGCCTGAGTCTCAGCATGGCGGATGGGTGAGTGATGCCCCAAGGGAACCTCGCCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS CCA 90 bp | CGGCTCCGTGGCATAAGCGCGGTAGTTGGAGGAGCGGCGTCTGATTaGGGCTGGTGCAGGGCGAGGTTCCCTAGCCGCATCGCTGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: RLRGISAVVGGAASD*GWCRARFPSRIAAP Trigger: GGGAGCAGCGATGCGGCTAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCTTATGCCACGGAGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344887.10 ENST00000587176.5 ENST00000665070.1 |
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| CDS CCA 90 bp | CGTGGCATAAGCGCGGTAGTTGGAGGAGCGGCGTCTGATTGGGGCTaGTGCAGGGCGAGGTTCCCTAGCCGCATCGCTGCTCCCATCCGC | + |
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Preference number: 5 (lower is better) Translates to: RGISAVVGGAASDWG*CRARFPSRIAAPIR Trigger: GCGGATGGGAGCAGCGATGCGGCTAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCTTATGCCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000344887.10 ENST00000587176.5 ENST00000665070.1 |
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| CDS TCA 90 bp | CGTGCGGCTCCGTGGCATAAGCGCGGTAGTTGGAGGAGCGGCGTCTaGTTGGGGCTGGTGCAGGGCGAGGTTCCCTTGGGGCATCACTCA | + |
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Preference number: 5 (lower is better) Translates to: RAAPWHKRGSWRSGV*LGLVQGEVPLGHHS Trigger: TGAGTGATGCCCCAAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCTTATGCCACGGAGCCGCACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS GCA 90 bp | GGCATAAGCGCGGTAGTTGGAGGAGCGGCGTCTGATTGGGGCTGGTaGAGGGCGAGGTTCCCTAGCCGCATCGCTGCTCCCATCCGCCAT | + |
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Preference number: 5 (lower is better) Translates to: GISAVVGGAASDWGW*RARFPSRIAAPIRH Trigger: ATGGCGGATGGGAGCAGCGATGCGGCTAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCTTATGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000344887.10 ENST00000587176.5 ENST00000665070.1 |
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| CDS CCA 90 bp | CGGCTCCGTGGCATAAGCGCGGTAGTTGGAGGAGCGGCGTCTGATTaGGGCTGGTGCAGGGCGAGGTTCCCTTGGGGCATCACTCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLRGISAVVGGAASD*GWCRARFPWGITHP Trigger: TGGGTGAGTGATGCCCCAAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCTTATGCCACGGAGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS GCA 90 bp | GGACTCCTTAGCCCGGGCCCCCAGCAGCGCCTGCATCATGGCATCTaGAGAGATCCTCACTCTCCGCAGGGTGGGCCGCTTAAACTTGCC | + |
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Preference number: 5 (lower is better) Translates to: GLLSPGPQQRLHHGI*RDPHSPQGGPLKLA Trigger: GGCAAGTTTAAGCGGCCCACCCTGCGGAGAGTGAGGATCTCTGCAGATGCCATGATGCAGGCGCTGCTGGGGGCCCGGGCTAAGGAGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000588882.1 ENST00000589864.1 ENST00000665070.1 |
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| CDS GCA 90 bp | CCGGGTGACCTTCAGGGTCCCAGGGACCGTCAGTCTCCTCCGGGCTaGTTGAGACTCCCCGAGGACACTGAGATAAAGGGCGAGGACACA | + |
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Preference number: 5 (lower is better) Translates to: PGDLQGPRDRQSPPG*LRLPEDTEIKGEDT Trigger: TGTGTCCTCGCCCTTTATCTCAGTGTCCTCGGGGAGTCTCAAGCAGCCCGGAGGAGACTGACGGTCCCTGGGACCCTGAAGGTCACCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587176.5 |
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| CDS CCA 90 bp | GAGGGAAGCGCAGCCCACCCGGGGCTTCAGGATAAAGACCAGGCGTaGGGAACCGCCTCTGCCCTTCTAAACCCTCCAGTTTGGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: EGSAAHPGLQDKDQA*GTASALLNPPVWSP Trigger: TGGAGACCAAACTGGAGGGTTTAGAAGGGCAGAGGCGGTTCCCCACGCCTGGTCTTTATCCTGAAGCCCCGGGTGGGCTGCGCTTCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585806.5 |
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| CDS GCA 90 bp | CTTCTCTCCGCGCCGCTCCTCCGCCTCTCGCTCCAGCTCTTGCTTTaGAATCTGCAGCAGCAGAGTCTTCAGCTGCAATTTTCTCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: LLSAPLLRLSLQLLL*NLQQQSLQLQFSRG Trigger: GCCTCGAGAAAATTGCAGCTGAAGACTCTGCTGCTGCAGATTGCAAAGCAAGAGCTGGAGCGAGAGGCGGAGGAGCGGCGCGGAGAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000344887.10 ENST00000586669.5 ENST00000587176.5 ENST00000588882.1 ENST00000590463.1 ENST00000665070.1 |
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| CDS TCA 90 bp | CGCAGGGTGGGCCGCTTAAACTTGCCTCGAAGGTCAAAGATCTTCTaGGTCAGATCTGCAATCTGGGGGCACACGAGGGGGTGGGTACTT | + |
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Preference number: 5 (lower is better) Translates to: RRVGRLNLPRRSKIF*VRSAIWGHTRGWVL Trigger: AAGTACCCACCCCCTCGTGTGCCCCCAGATTGCAGATCTGACTCAGAAGATCTTTGACCTTCGAGGCAAGTTTAAGCGGCCCACCCTGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000589864.1 |
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| CDS GCA 90 bp | CGAGCTGCCCATGCGTCCCACCTCCGTGATGTTCTTGGTGACTTTTaGCTCTATGTCGTATCTCTCTTCATCCACCTTGTCCACACGGGC | + |
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Preference number: 5 (lower is better) Translates to: RAAHASHLRDVLGDF*LYVVSLFIHLVHTG Trigger: GCCCGTGTGGACAAGGTGGATGAAGAGAGATACGACATAGAGGCAAAAGTCACCAAGAACATCACGGAGGTGGGACGCATGGGCAGCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587176.5 ENST00000665070.1 |
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| CDS CCA 90 bp | AGGCCACGCCCCTCATTCCCATCCACCAATCTGGGTCTCTTCCTTTaGATAGGCACTTCCCATCTATCCCTAAGCAAGTCCGAGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RPRPSFPSTNLGLFL*IGTSHLSLSKSEGN Trigger: GTTGCCCTCGGACTTGCTTAGGGATAGATGGGAAGTGCCTATCCAAAGGAAGAGACCCAGATTGGTGGATGGGAATGAGGGGCGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS GCA 90 bp | CCGCTTAAACTTGCCTCGAAGGTCAAAGATCTTCTGAGTCAGATCTaGAATCTGGGGGCACACGAGGGGGTGGGTACTTCTCCTTCCATT | + |
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Preference number: 5 (lower is better) Translates to: PLKLASKVKDLLSQI*NLGAHEGVGTSPSI Trigger: AATGGAAGGAGAAGTACCCACCCCCTCGTGTGCCCCCAGATTGCAGATCTGACTCAGAAGATCTTTGACCTTCGAGGCAAGTTTAAGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000589864.1 |
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| CDS CCA 90 bp | TCCTCATATGCTCCAGCCTCACCTCTCAAAACCACTGGCATAACCTaGTCCAGCTACATGCAAATCACAATTCCCTGGCCAGTGCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSYAPASPLKTTGIT*SSYMQITIPWPVPE Trigger: CTCAGGCACTGGCCAGGGAATTGTGATTTGCATGTAGCTGGACCAGGTTATGCCAGTGGTTTTGAGAGGTGAGGCTGGAGCATATGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587176.5 |
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| CDS GCA 90 bp | CTTCTGAGTCAGATCTGCAATCTCCGTGATGTTCTTGGTGACTTTTaGCTCTATGTCGTATCTCTCTTCATCCACCTTGTCCACACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSQICNLRDVLGDF*LYVVSLFIHLVHTG Trigger: GCCCGTGTGGACAAGGTGGATGAAGAGAGATACGACATAGAGGCAAAAGTCACCAAGAACATCACGGAGATTGCAGATCTGACTCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000586669.5 ENST00000588882.1 |
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| CDS TCA 90 bp | AACCTGGTCCAGCTACATGCAAATCACAATTCCCTGGCCAGTGCCTaGGCTAATTTACCAACATGTGATGCCCTGAGCATGTTCACTAAC | + |
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Preference number: 5 (lower is better) Translates to: NLVQLHANHNSLASA*ANLPTCDALSMFTN Trigger: GTTAGTGAACATGCTCAGGGCATCACATGTTGGTAAATTAGCTCAGGCACTGGCCAGGGAATTGTGATTTGCATGTAGCTGGACCAGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587176.5 |
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| CDS GCA 72 bp | AGCCCAGCCCGGCCAACTCCAGCGGCTGGCAGCGGGTaGTCAGAGCGCGCCCCTTCTCTCCGCGCCGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SPARPTPAAGSG*SERAPSLRAAP Trigger: AGGAGCGGCGCGGAGAGAAGGGGCGCGCTCTGAGCACCCGCTGCCAGCCGCTGGAGTTGGCCGGGCTGGGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000586669.5 ENST00000587176.5 ENST00000588882.1 ENST00000590463.1 ENST00000665070.1 |
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| CDS CCA 72 bp | AGCTCCGCGAAGCCCAGCCCGGCCAACTCCAGCGGCTaGCAGCGGGTGCTCAGAGCGCGCCCCTTCTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SSAKPSPANSSG*QRVLRARPFSP Trigger: CGGAGAGAAGGGGCGCGCTCTGAGCACCCGCTGCCAGCCGCTGGAGTTGGCCGGGCTGGGCTTCGCGGAGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000586669.5 ENST00000587176.5 ENST00000588882.1 ENST00000590463.1 ENST00000665070.1 |
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| CDS TCA 72 bp | GGGGCGTTTGGAGGGTCAGTGAGGGGGCCGCCCGGGTaGCCTTCAGGGTCCCAGGGACCGTCAGTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GAFGGSVRGPPG*PSGSQGPSVSS Trigger: GGAGGAGACTGACGGTCCCTGGGACCCTGAAGGTCACCCGGGCGGCCCCCTCACTGACCCTCCAAACGCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000344887.10 ENST00000586446.1 ENST00000587176.5 ENST00000590463.1 ENST00000665070.1 |
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| CDS GCA 72 bp | CTCCCAGGGTCTTGGATCCCTCCGGCGCCTGTACTCTaGCCCCAGGAAGCCCCGTCCCACCTTGGCGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: LPGSWIPPAPVL*PQEAPSHLGVR Trigger: CCGCACGCCAAGGTGGGACGGGGCTTCCTGGGGGCAGAGTACAGGCGCCGGAGGGATCCAAGACCCTGGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS GCA 72 bp | GCGGTAGTTGGAGGAGCGGCGTCTGATTGGGGCTGGTaGAGGGCGAGGTTCCCTAGCCCTGGCCCTGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: AVVGGAASDWGW*RARFPSPGPGG Trigger: ACCCCCAGGGCCAGGGCTAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586669.5 ENST00000590463.1 |
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| CDS CCA 72 bp | AGCGCGGTAGTTGGAGGAGCGGCGTCTGATTGGGGCTaGTGCAGGGCGAGGTTCCCTAGCCCTGGCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SAVVGGAASDWG*CRARFPSPGPG Trigger: CCCAGGGCCAGGGCTAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586669.5 ENST00000590463.1 |
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| CDS GCA 72 bp | GCGGTAGTTGGAGGAGCGGCGTCTGATTGGGGCTGGTaGAGGGCGAGGTTCCCTAGCCGCATCGCTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: AVVGGAASDWGW*RARFPSRIAAP Trigger: GGGAGCAGCGATGCGGCTAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000344887.10 ENST00000587176.5 ENST00000665070.1 |
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| CDS CAA 90 bp | GCGCCCCTTCTCTCCGCGCCGCTCCTCCGCCTCTCGCTCCAGCTCTaGCTTTGCAATCTGCAGCAGCAGAGTCTGCAGAGGGGTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: APLLSAPLLRLSLQL*LCNLQQQSLQRGGR Trigger: CCTCCCACCCCTCTGCAGACTCTGCTGCTGCAGATTGCAAAGCAAGAGCTGGAGCGAGAGGCGGAGGAGCGGCGCGGAGAGAAGGGGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585806.5 |
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| CDS TCA 72 bp | CCGTGGCATAAGCGCGGTAGTTGGAGGAGCGGCGTCTaGTTGGGGCTGGTGCAGGGCGAGGTTCCCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PWHKRGSWRSGV*LGLVQGEVPLG Trigger: CCCCAAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCTTATGCCACGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS CCA 72 bp | AGCGCGGTAGTTGGAGGAGCGGCGTCTGATTGGGGCTaGTGCAGGGCGAGGTTCCCTAGCCGCATCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SAVVGGAASDWG*CRARFPSRIAA Trigger: AGCAGCGATGCGGCTAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000344887.10 ENST00000587176.5 ENST00000665070.1 |
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| CDS CCA 72 bp | GGCATAAGCGCGGTAGTTGGAGGAGCGGCGTCTGATTaGGGCTGGTGCAGGGCGAGGTTCCCTAGCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GISAVVGGAASD*GWCRARFPSPG Trigger: GCCAGGGCTAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCTTATGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000586669.5 ENST00000590463.1 |
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| CDS TCA 72 bp | GGTTCCCTTGGGGCATCACTCACCCATCCGCCATGCTaGGACTCAGGCCGGGAATGGCAGGAGGCAGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: GSLGASLTHPPC*DSGREWQEAGR Trigger: TCGCCCTGCCTCCTGCCATTCCCGGCCTGAGTCTCAGCATGGCGGATGGGTGAGTGATGCCCCAAGGGAACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS GCA 72 bp | GCGGTAGTTGGAGGAGCGGCGTCTGATTGGGGCTGGTaGAGGGCGAGGTTCCCTTGGGGCATCACTCACCCA | + |
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Preference number: 6 (lower is better) Translates to: AVVGGAASDWGW*RARFPWGITHP Trigger: TGGGTGAGTGATGCCCCAAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS CCA 72 bp | GGCATAAGCGCGGTAGTTGGAGGAGCGGCGTCTGATTaGGGCTGGTGCAGGGCGAGGTTCCCTAGCCGCATC | + |
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Preference number: 6 (lower is better) Translates to: GISAVVGGAASD*GWCRARFPSRI Trigger: GATGCGGCTAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCTTATGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344887.10 ENST00000587176.5 ENST00000665070.1 |
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| CDS CCA 72 bp | AGCGCGGTAGTTGGAGGAGCGGCGTCTGATTGGGGCTaGTGCAGGGCGAGGTTCCCTTGGGGCATCACTCAC | + |
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Preference number: 6 (lower is better) Translates to: SAVVGGAASDWG*CRARFPWGITH Trigger: GTGAGTGATGCCCCAAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS CCA 72 bp | GGCATAAGCGCGGTAGTTGGAGGAGCGGCGTCTGATTaGGGCTGGTGCAGGGCGAGGTTCCCTTGGGGCATC | + |
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Preference number: 6 (lower is better) Translates to: GISAVVGGAASD*GWCRARFPWGI Trigger: GATGCCCCAAGGGAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCTTATGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS GCA 72 bp | CTTCAGGGTCCCAGGGACCGTCAGTCTCCTCCGGGCTaGTTGAGACTCCCCGAGGACACTGAGATAAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LQGPRDRQSPPG*LRLPEDTEIKG Trigger: GCCCTTTATCTCAGTGTCCTCGGGGAGTCTCAAGCAGCCCGGAGGAGACTGACGGTCCCTGGGACCCTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587176.5 |
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| CDS CCA 72 bp | GCAGCCCACCCGGGGCTTCAGGATAAAGACCAGGCGTaGGGAACCGCCTCTGCCCTTCTAAACCCTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: AAHPGLQDKDQA*GTASALLNPPV Trigger: AACTGGAGGGTTTAGAAGGGCAGAGGCGGTTCCCCACGCCTGGTCTTTATCCTGAAGCCCCGGGTGGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585806.5 |
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| CDS GCA 72 bp | AGCAAGTCCGAGGGCAACGGAGTTCCGCCCGCAGGCTaGTGTCACCAATCCGAGCATGACCCTCTGCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: SKSEGNGVPPAG*CHQSEHDPLQN Trigger: GTTTTGCAGAGGGTCATGCTCGGATTGGTGACAGCAGCCTGCGGGCGGAACTCCGTTGCCCTCGGACTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS CAA 90 bp | GCGCCCCTTCTCTCCGCGCCGCTCCTCCGCCTCTCGCTCCAGCTCTaGCTTTGCAATCTGCAGCAGCAGAGTCTTCAGCTGCAATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: APLLSAPLLRLSLQL*LCNLQQQSLQLQFS Trigger: AGAAAATTGCAGCTGAAGACTCTGCTGCTGCAGATTGCAAAGCAAGAGCTGGAGCGAGAGGCGGAGGAGCGGCGCGGAGAGAAGGGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000344887.10 ENST00000586669.5 ENST00000587176.5 ENST00000588882.1 ENST00000590463.1 ENST00000665070.1 |
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| CDS CCA 72 bp | TCGTATCTCTCTTCATCCACCTTGTCCACACGGGCGTaGAGCTGTCGGCACAAGTCCTGCAGCTCCGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: SYLSSSTLSTRA*SCRHKSCSSAK Trigger: CTTCGCGGAGCTGCAGGACTTGTGCCGACAGCTCCACGCCCGTGTGGACAAGGTGGATGAAGAGAGATACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000586669.5 ENST00000587176.5 ENST00000588882.1 ENST00000590463.1 ENST00000665070.1 |
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| CDS CAA 90 bp | CCTTCTCTCCGCGCCGCTCCTCCGCCTCTCGCTCCAGCTCTTGCTTaGCAATCTGCAGCAGCAGAGTCTTCAGCTGCAATTTTCTCGAGG | + |
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Preference number: 6 (lower is better) Translates to: PSLRAAPPPLAPALA*QSAAAESSAAIFSR Trigger: CCTCGAGAAAATTGCAGCTGAAGACTCTGCTGCTGCAGATTGCAAAGCAAGAGCTGGAGCGAGAGGCGGAGGAGCGGCGCGGAGAGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000344887.10 ENST00000586669.5 ENST00000587176.5 ENST00000588882.1 ENST00000590463.1 ENST00000665070.1 |
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| CDS CAA 90 bp | GAGGCCACGCCCCTCATTCCCATCCACCAATCTGGGTCTCTTCCTTaGGATAGGCACTTCCCATCTATCCCTAAGCAAGTCCGAGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: EATPLIPIHQSGSLP*DRHFPSIPKQVRGQ Trigger: TTGCCCTCGGACTTGCTTAGGGATAGATGGGAAGTGCCTATCCAAAGGAAGAGACCCAGATTGGTGGATGGGAATGAGGGGCGTGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS TCA 72 bp | GGCCGCTTAAACTTGCCTCGAAGGTCAAAGATCTTCTaGGTCAGATCTGCAATCTGGGGGCACACGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GRLNLPRRSKIF*VRSAIWGHTRG Trigger: CCCCCTCGTGTGCCCCCAGATTGCAGATCTGACTCAGAAGATCTTTGACCTTCGAGGCAAGTTTAAGCGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589864.1 |
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| CDS CAA 90 bp | TTCTTGGTGACTTTTGCCTCTATGTCGTATCTCTCTTCATCCACCTaGTCCACACGGGCGTGGAGCTGTCGGCACAAGTCCTGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FLVTFASMSYLSSST*STRAWSCRHKSCSS Trigger: GGAGCTGCAGGACTTGTGCCGACAGCTCCACGCCCGTGTGGACAAGGTGGATGAAGAGAGATACGACATAGAGGCAAAAGTCACCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000586669.5 ENST00000587176.5 ENST00000588882.1 ENST00000590463.1 ENST00000665070.1 |
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| CDS CAA 90 bp | CCGAAGGTACCCGAGCTGCCCATGCGTCCCACCTCCGTGATGTTCTaGGTGACTTTTGCCTCTATGTCGTATCTCTCTTCATCCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: PKVPELPMRPTSVMF*VTFASMSYLSSSTL Trigger: CAAGGTGGATGAAGAGAGATACGACATAGAGGCAAAAGTCACCAAGAACATCACGGAGGTGGGACGCATGGGCAGCTCGGGTACCTTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587176.5 ENST00000665070.1 |
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| CDS TCA 72 bp | GTCTCCTCCGGGCTGCTTGAGACTCCCCGAGGACACTaGGATAAAGGGCGAGGACACAGACTAAATATACTG | + |
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Preference number: 6 (lower is better) Translates to: VSSGLLETPRGH*DKGRGHRLNIL Trigger: CAGTATATTTAGTCTGTGTCCTCGCCCTTTATCTCAGTGTCCTCGGGGAGTCTCAAGCAGCCCGGAGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587176.5 |
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| CDS GCA 72 bp | TCCTCCGCCTCTCGCTCCAGCTCTTGCTTTGCAATCTaGAGCAGCAGAGTCTTCAGCTGCAATTTTCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: SSASRSSSCFAI*SSRVFSCNFLE Trigger: CTCGAGAAAATTGCAGCTGAAGACTCTGCTGCTGCAGATTGCAAAGCAAGAGCTGGAGCGAGAGGCGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000344887.10 ENST00000586669.5 ENST00000587176.5 ENST00000588882.1 ENST00000590463.1 ENST00000665070.1 |
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| CDS GCA 72 bp | CTTGCCTCGAAGGTCAAAGATCTTCTGAGTCAGATCTaGAATCTGGGGGCACACGAGGGGGTGGGTACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LASKVKDLLSQI*NLGAHEGVGTS Trigger: AGAAGTACCCACCCCCTCGTGTGCCCCCAGATTGCAGATCTGACTCAGAAGATCTTTGACCTTCGAGGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000589864.1 |
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| CDS CAA 72 bp | ACTTTTGCCTCTATGTCGTATCTCTCTTCATCCACCTaGTCCACACGGGCGTGGAGCTGTCGGCACAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TFASMSYLSSST*STRAWSCRHKS Trigger: GGACTTGTGCCGACAGCTCCACGCCCGTGTGGACAAGGTGGATGAAGAGAGATACGACATAGAGGCAAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000586669.5 ENST00000587176.5 ENST00000588882.1 ENST00000590463.1 ENST00000665070.1 |
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| CDS TCA 72 bp | GGCCGCTTAAACTTGCCTCGAAGGTCAAAGATCTTCTaGGTCAGATCTGCAATCCCGAAGGTACCCGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GRLNLPRRSKIF*VRSAIPKVPEL Trigger: CAGCTCGGGTACCTTCGGGATTGCAGATCTGACTCAGAAGATCTTTGACCTTCGAGGCAAGTTTAAGCGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665070.1 |
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| CDS CCA 72 bp | GCTCCAGCCTCACCTCTCAAAACCACTGGCATAACCTaGTCCAGCTACATGCAAATCACAATTCCCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: APASPLKTTGIT*SSYMQITIPWP Trigger: TGGCCAGGGAATTGTGATTTGCATGTAGCTGGACCAGGTTATGCCAGTGGTTTTGAGAGGTGAGGCTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587176.5 |
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| CDS CAA 72 bp | GCAGTAGGCAGGAAGGCTCAGCTCTCAAACTTTTTCTaGCGGCCCTCCATTCCACTCAGTGCATCGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: AVGRKAQLSNFF*RPSIPLSASMF Trigger: GAACATCGATGCACTGAGTGGAATGGAGGGCCGCAAGAAAAAGTTTGAGAGCTGAGCCTTCCTGCCTACTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000588882.1 ENST00000589864.1 ENST00000665070.1 |
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| CDS CAA 72 bp | TGTTCCCTCTGCCTAGAACAGCTTTCCTTGACTATATaGTACTCATCCTTCTGCCCCAGCCCTGCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: CSLCLEQLSLTI*YSSFCPSPARL Trigger: GAGCCTGGCAGGGCTGGGGCAGAAGGATGAGTACAATATAGTCAAGGAAAGCTGTTCTAGGCAGAGGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587176.5 |
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| CDS CCA 72 bp | CCCTCATTCCCATCCACCAATCTGGGTCTCTTCCTTTaGATAGGCACTTCCCATCTATCCCTAAGCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: PSFPSTNLGLFL*IGTSHLSLSKS Trigger: GGACTTGCTTAGGGATAGATGGGAAGTGCCTATCCAAAGGAAGAGACCCAGATTGGTGGATGGGAATGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS CAA 72 bp | CCCCTCATTCCCATCCACCAATCTGGGTCTCTTCCTTaGGATAGGCACTTCCCATCTATCCCTAAGCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: PLIPIHQSGSLP*DRHFPSIPKQV Trigger: GACTTGCTTAGGGATAGATGGGAAGTGCCTATCCAAAGGAAGAGACCCAGATTGGTGGATGGGAATGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586446.1 |
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| CDS GCA 72 bp | CATGCGTCCCACCTCCGTGATGTTCTTGGTGACTTTTaGCTCTATGTCGTATCTCTCTTCATCCACCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: HASHLRDVLGDF*LYVVSLFIHLV Trigger: GACAAGGTGGATGAAGAGAGATACGACATAGAGGCAAAAGTCACCAAGAACATCACGGAGGTGGGACGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587176.5 ENST00000665070.1 |
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| CDS TCA 72 bp | GGCCGCTTAAACTTGCCTCGAAGGTCAAAGATCTTCTaGGTCAGATCTGCAATCTCCGTGATGTTCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GRLNLPRRSKIF*VRSAISVMFLV Trigger: CACCAAGAACATCACGGAGATTGCAGATCTGACTCAGAAGATCTTTGACCTTCGAGGCAAGTTTAAGCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000586669.5 ENST00000588882.1 |
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| CDS TCA 72 bp | CAGCTACATGCAAATCACAATTCCCTGGCCAGTGCCTaGGCTAATTTACCAACATGTGATGCCCTGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: QLHANHNSLASA*ANLPTCDALSM Trigger: CATGCTCAGGGCATCACATGTTGGTAAATTAGCTCAGGCACTGGCCAGGGAATTGTGATTTGCATGTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587176.5 |
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| CDS GCA 72 bp | CAGATCTGCAATCTCCGTGATGTTCTTGGTGACTTTTaGCTCTATGTCGTATCTCTCTTCATCCACCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: QICNLRDVLGDF*LYVVSLFIHLV Trigger: GACAAGGTGGATGAAGAGAGATACGACATAGAGGCAAAAGTCACCAAGAACATCACGGAGATTGCAGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344887.10 ENST00000585806.5 ENST00000586669.5 ENST00000588882.1 |
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| CDS CCA 72 bp | ATAACCTGGTCCAGCTACATGCAAATCACAATTCCCTaGCCAGTGCCTGAGCTAATTTACCAACATGTGATG | + |
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Preference number: 6 (lower is better) Translates to: ITWSSYMQITIP*PVPELIYQHVM Trigger: CATCACATGTTGGTAAATTAGCTCAGGCACTGGCCAGGGAATTGTGATTTGCATGTAGCTGGACCAGGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587176.5 |
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