Pregenerated sensors for TNNC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000101470Ensembl transcript IDs: ENST00000372555.8, ENST00000372557.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTaGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCC | + |
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Preference number: 3 (lower is better) Translates to: LPDKDPQGVAPP*WGPGRAESPTP Trigger: GGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR TCA 90 bp | GGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCTAGGGCTGGCCGGACTGGGATaGCTCTGCGGCAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GRASLVGTRQGGVSHTLGLAGLG*LCGRPG Trigger: CCCAGGCCTGCCGCAGAGTCATCCCAGTCCGGCCAG...CCCTAGGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | GGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCTAGGGCCGGGACTCCTCTGTTaGAGGTCGCCTCCTTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: GRASLVGTRQGGVSHTLGPGLLC*RSPPLH Trigger: GTGCAAAGGAGGCGACCTGCAACAGAGGAGTCCCGG...CCCTAGGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372555.8 |
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| CDS-3UTR GCA 90 bp | AGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCTACCTCGAAGTCGATGGTaGCGCTGCCGTCCTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: RGRASLVGTRQGGVSHTLPRSRW*RCRPHP Trigger: TGGATGAGGACGGCAGCGGCACCATCGACTTCGAGG...TAGGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | AAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCTCCTCGTCCGTCACGTaGTCCCCGGAGGCCCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: KTHKGSRLPGGDPAGRSLSSSVT*SPEALK Trigger: TTTCAGGGCCTCCGGGGAGCACGTGACGGACGAGGA...GAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | CCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGACCTGGCCTCAGCCTaGTGGTCCGTCCTCTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PDKDPQGVAPPWWGPGRADLASA*WSVLSG Trigger: ACCAGAGAGGACGGACCAGCAGGCTGAGGCCAGGTC...CGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS-3UTR CCA 90 bp | CCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAACACTGGCCGGACTaGGATGACTCTGCGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PDKDPQGVAPPWWGPGRAEHWPD*DDSAAG Trigger: GCCTGCCGCAGAGTCATCCCAGTCCGGCCAGTGTTC...CGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS-3UTR CCA 90 bp | AAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCTGGCCTCAGCCTGCTaGTCCGTCCTCTCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: KTHKGSRLPGGDPAGRSLLASAC*SVLSGP Trigger: AGGACCAGAGAGGACGGACCAGCAGGCTGAGGCCAG...GAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | CAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCCCTCGAAGTCGATGGTaGCGCTGCCGTCCTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QRPTRGRASLVGTRQGGVPRSRW*RCRPHP Trigger: TGGATGAGGACGGCAGCGGCACCATCGACTTCGAGG...GACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | CAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCCATTCCTGTCGAAGATaGGGAAGCACTCGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QGVAPPWWGPGRAESPTPHSCRR*GSTRPA Trigger: AGCTGGCCGAGTGCTTCCGCATCTTCGACAGGAATG...GGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR CCA 90 bp | CCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGCCTGCTGGTCCGTCATaGTTGCTGGTGACCGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PDKDPQGVAPPWWGPGRAPAGPS*LLVTGT Trigger: AGTCCCGGTCACCAGCAACCATGACGGACCAGCAGG...CGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372555.8 |
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| CDS-3UTR CCA 90 bp | AGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCTAACTCCTCGAAGTCGATaGTGCCGCTGCCGTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RGRASLVGTRQGGVSHTLTPRSR*CRCRPH Trigger: ATGAGGACGGCAGCGGCACCATCGACTTCGAGGAGT...TAGGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR CCA 90 bp | ACCCGGCAGGGCGGAGTCTCCCACACCCTAGGGACACGCGATCTTGGTAGAGGCACTCTGCGGCAGGCCTaGGACTCCCTCAGGCCGACC | + |
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Preference number: 4 (lower is better) Translates to: TRQGGVSHTLGTRDLGRGTLRQA*DSLRPT Trigger: GGTCGGCCTGAGGGAGTCCCAGGCCTGCCGCAGAGT...GCCTCTACCAAGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCCCTGCCGGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS-3UTR TCA 90 bp | CAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCTCTGGCGCACCATCATaGCCAAGAACTCCTCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QGVAPPWWGPGRAESPTPSGAPS*PRTPRS Trigger: ACTTCGAGGAGTTCTTGGTCATGATGGTGCGCCAGA...GGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR TCA 90 bp | AAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCGATTGTGCAAGCCTGTaGACACTGGCCGGACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: KTHKGSRLPGGDPAGRSLDCASL*TLAGLG Trigger: TCCCAGTCCGGCCAGTGTTCACAGGCTTGCACAATC...GAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | ACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCGCAGGTCGCCTCCTTTaGACTCCACCACCCAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: TRGRASLVGTRQGGVSHTAGRLL*TPPPKD Trigger: ATCTTTGGGTGGTGGAGTGCAAAGGAGGCGACCTGC...GGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372555.8 |
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| CDS-3UTR GCA 90 bp | GGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCTAGGGACACGCGATCTTGGAGTCGATGGTGCCGCTaGCGTCCTCATCCACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GGDPAGRSLPHPRDTRSWSRWCR*RPHPPP Trigger: AGGAGGTGGATGAGGACGGCAGCGGCACCATCGACT...CCAAGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR CCA 90 bp | AGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCTACAAGCCTGTGAACACTaGCCGGACTGGGATGACTCT | + |
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Preference number: 4 (lower is better) Translates to: RGRASLVGTRQGGVSHTLQACEH*PDWDDS Trigger: AGAGTCATCCCAGTCCGGCCAGTGTTCACAGGCTTG...TAGGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS-3UTR TCA 90 bp | GGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCTAGGGACACGCGATCTTGGCGATCATCTCTTCGCTaGGGTAGGACCTGGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GGDPAGRSLPHPRDTRSWRSSLR*GRTWPQ Trigger: CTGAGGCCAGGTCCTACCTCAGCGAAGAGATGATCG...CCAAGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | CCTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGAGTCGATGGTGCCGCTaGCGTCCTCATCCACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PSRQRPTRGRASLVGTRQSRWCR*RPHPPP Trigger: AGGAGGTGGATGAGGACGGCAGCGGCACCATCGACT...CTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | ACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCGTCGATGTAGCCGTCTaGATTCCTGTCGAAGATGCG | + |
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Preference number: 4 (lower is better) Translates to: TRGRASLVGTRQGGVSHTVDVAV*IPVEDA Trigger: CGCATCTTCGACAGGAATGCAGACGGCTACATCGAC...GGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR CCA 90 bp | CCTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGCTGGCCTCAGCCTGCTaGTCCGTCATGGTTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PSRQRPTRGRASLVGTRQLASAC*SVMVAG Trigger: ACCAGCAACCATGACGGACCAGCAGGCTGAGGCCAG...CTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372555.8 |
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| CDS-3UTR TCA 90 bp | TCCTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCACGTCATGGTTGCTGGTaGCCGGGACTCCTCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SFQTKTHKGSRLPGGDPARHGCW*PGLLCC Trigger: GCAACAGAGGAGTCCCGGTCACCAGCAACCATGACG...TGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372555.8 |
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| CDS-3UTR TCA 90 bp | CTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGCGATCATCTCTTCGCTaGGGTAGGACCTGGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LPDKDPQGVAPPWWGPGRRSSLR*GRTWPQ Trigger: CTGAGGCCAGGTCCTACCTCAGCGAAGAGATGATCG...CCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | ACCCGGCAGGGCGGAGTCTCCCACACCCTAGGGACACGCGATCTTGGTAGAGGCGACCTGGCCTCAGCCTaGTGGTCCGTCATGGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: TRQGGVSHTLGTRDLGRGDLASA*WSVMVA Trigger: AGCAACCATGACGGACCAGCAGGCTGAGGCCAGGTC...GCCTCTACCAAGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCCCTGCCGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372555.8 |
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| CDS-3UTR GCA 90 bp | AAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTGTCGATGTAGCCGTCTaGATTCCTGTCGAAGATGCG | + |
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Preference number: 4 (lower is better) Translates to: KDPQGVAPPWWGPGRAESVDVAV*IPVEDA Trigger: CGCATCTTCGACAGGAATGCAGACGGCTACATCGAC...AGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | AAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCTGTCCACTCCTTACTaGACGCCCTCCATCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: KDPQGVAPPWWGPGRAESLSTPY*TPSIIF Trigger: GAAGATGATGGAGGGCGTGCAGTAAGGAGTGGACAG...AGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR TCA 90 bp | AAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCTGTCAAAGGCAGCCTTaGACTCAGCGATCATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: KTHKGSRLPGGDPAGRSLCQRQP*TQRSSL Trigger: AAGAGATGATCGCTGAGTTCAAGGCTGCCTTTGACA...GAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR TCA 90 bp | GGCGGAGTCTCCCACACCCTAGGGACACGCGATCTTGGTAGAGGCGACTGTCCACATCCACCTCCTCGATaGTGGCGTCCAGCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GGVSHTLGTRDLGRGDCPHPPPR*WRPAPP Trigger: AGGAGGAGCTGGACGCCATCATCGAGGAGGTGGATG...TGGACAGTCGCCTCTACCAAGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR TCA 90 bp | CTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGTCTGGCGCACCATCATaGCCAAGAACTCCTCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LPDKDPQGVAPPWWGPGRSGAPS*PRTPRS Trigger: ACTTCGAGGAGTTCTTGGTCATGATGGTGCGCCAGA...CCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | ACCCGGCAGGGCGGAGTCTCCCACACCCTAGGGACACGCGATCTTGGTAGAGGCCATTCCTGTCGAAGATaGGGAAGCACTCGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TRQGGVSHTLGTRDLGRGHSCRR*GSTRPA Trigger: AGCTGGCCGAGTGCTTCCGCATCTTCGACAGGAATG...GCCTCTACCAAGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCCCTGCCGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | CCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCTAGGGACACGCGATCTACTCGTCGAAGTCAATaGGGCCGTCGTTGTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: PGGDPAGRSLPHPRDTRSTRRSQ*GRRCSC Trigger: ACAAGAACAACGACGGCCGCATTGACTTCGACGAGT...AGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | CTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGCTGTCCACTCCTTACTaGACGCCCTCCATCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPDKDPQGVAPPWWGPGRLSTPY*TPSIIF Trigger: GAAGATGATGGAGGGCGTGCAGTAAGGAGTGGACAG...CCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | TTTATTCCTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCTCCTCGTCCGTCACGTaGTCCCCGGAGGCCCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: FIPSRQRPTRGRASLVGTSSSVT*SPEALK Trigger: TTTCAGGGCCTCCGGGGAGCACGTGACGGACGAGGA...GGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAGGAATAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | AGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGACTCAGTTTCCCTGTTTaGCTACTTCCCATGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RQRPTRGRASLVGTRQGGLSFPV*LLPMCE Trigger: CTCACACATGGGAAGTAGGCAAACAGGGAAACTGAG...TCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS-3UTR TCA 90 bp | TTTATTCCTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCATCCACCTCCTCGATaGTGGCGTCCAGCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FIPSRQRPTRGRASLVGTHPPPR*WRPAPP Trigger: AGGAGGAGCTGGACGCCATCATCGAGGAGGTGGATG...GGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAGGAATAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR CCA 90 bp | TTATTCCTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCACTCCTCGAAGTCGATaGTGCCGCTGCCGTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LFLPDKDPQGVAPPWWGPTPRSR*CRCRPH Trigger: ATGAGGACGGCAGCGGCACCATCGACTTCGAGGAGT...GGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAGGAATAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR CCA 90 bp | ATTCCTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCTGGTCCGTCCTCTCTaGTCCTCAGTTTCCCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: IPSRQRPTRGRASLVGTRLVRPL*SSVSLF Trigger: AAACAGGGAAACTGAGGACCAGAGAGGACGGACCAG...CCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS-3UTR CCA 90 bp | GGCGGAGTCTCCCACACCCTAGGGACACGCGATCTTGGTAGAGGCGACTGTCCAGCGTCCTCTTTCATCTaGCGCACCATCATGACCAAG | + |
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Preference number: 4 (lower is better) Translates to: GGVSHTLGTRDLGRGDCPASSFI*RTIMTK Trigger: CTTGGTCATGATGGTGCGCCAGATGAAAGAGGACGC...TGGACAGTCGCCTCTACCAAGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR TCA 90 bp | ACCCGGCAGGGCGGAGTCTCCCACACCCTAGGGACACGCGATCTTGGTAGAGGCCCTACTTCCCATGTGTaGGGTTCAAATCAGATTGTG | + |
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Preference number: 4 (lower is better) Translates to: TRQGGVSHTLGTRDLGRGPTSHV*GSNQIV Trigger: CACAATCTGATTTGAACCTCACACATGGGAAGTAGG...GCCTCTACCAAGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCCCTGCCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS-3UTR GCA 90 bp | TTATTCCTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCACTCGTCGAAGTCAATaGGGCCGTCGTTGTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LFLPDKDPQGVAPPWWGPTRRSQ*GRRCSC Trigger: ACAAGAACAACGACGGCCGCATTGACTTCGACGAGT...GGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAGGAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR TCA 90 bp | TTATTCCTTCCAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCTGTCAAAGGCAGCCTTaGACTCAGCGATCATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LFLPDKDPQGVAPPWWGPCQRQP*TQRSSL Trigger: AAGAGATGATCGCTGAGTTCAAGGCTGCCTTTGACA...GGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTGGAAGGAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR CAA 90 bp | CCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACGCTGGTCCGTCATGGTaGCTGGTGACCGGGACTCCT | + |
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Preference number: 5 (lower is better) Translates to: PTRGRASLVGTRQGGVSHAGPSW*LVTGTP Trigger: AGGAGTCCCGGTCACCAGCAACCATGACGGACCAGC...GTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372555.8 |
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| CDS-3UTR CAA 90 bp | CAGACAAAGACCCACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGACCGGGACTCCTCTGTaGCAGGTCGCCTCCTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: QTKTHKGSRLPGGDPAGRTGTPL*QVASFA Trigger: TGCAAAGGAGGCGACCTGCAACAGAGGAGTCCCGGT...CCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGTGGGTCTTTGTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372555.8 |
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| CDS-3UTR CAA 90 bp | CTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCTAGGGACACGCGATGCAGGTCGCCTCCTTaGCACTCCACCACCCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: LPGGDPAGRSLPHPRDTRCRSPP*HSTTQR Trigger: TCTTTGGGTGGTGGAGTGCAAAGGAGGCGACCTGCA...TCGCGTGTCCCTAGGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372555.8 |
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| CDS CCA 90 bp | AAGCCTGTGAACACTGGCCGGACTGGGATGACTCTGCGGCAGGCCTaGGACTCCCTCAGGCCGACCCAGGCTTCCCAAGTCCCTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: KPVNTGRTGMTLRQA*DSLRPTQASQVPPG Trigger: TCCAGGAGGGACTTGGGAAGCCTGGGTCGGCCTGAGGGAGTCCCAGGCCTGCCGCAGAGTCATCCCAGTCCGGCCAGTGTTCACAGGCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS-3UTR CAA 90 bp | ACAAGGGGTCGCGCCTCCCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCATGTCAAAGGCAGCCTaGAACTCAGCGATCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: TRGRASLVGTRQGGVSHTMSKAA*NSAIIS Trigger: AGAGATGATCGCTGAGTTCAAGGCTGCCTTTGACAT...GGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGGGAGGCGCGACCCCTTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR CAA 90 bp | CAGGGCGGAGTCTCCCACACCCTAGGGACACGCGATCTTGGTAGAGGCGACTGTACCGTGCCCAACTCCTaGACGCTGATGTCCCCACCA | + |
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Preference number: 5 (lower is better) Translates to: QGGVSHTLGTRDLGRGDCTVPNS*TLMSPP Trigger: TGGTGGGGACATCAGCGTCAAGGAGTTGGGCACGGT...ACAGTCGCCTCTACCAAGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR CAA 90 bp | GGCGGAGTCTCCCACACCCTAGGGACACGCGATCTTGGTAGAGGCGACTGTCCAACCGTGCCCAACTCCTaGACGCTGATGTCCCCACCA | + |
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Preference number: 5 (lower is better) Translates to: GGVSHTLGTRDLGRGDCPTVPNS*TLMSPP Trigger: TGGTGGGGACATCAGCGTCAAGGAGTTGGGCACGGT...TGGACAGTCGCCTCTACCAAGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS-3UTR CAA 90 bp | CCTGGTGGGGACCCGGCAGGGCGGAGTCTCCCACACCCTAGGGACACGCGATCTATGTCAAAGGCAGCCTaGAACTCAGCGATCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: PGGDPAGRSLPHPRDTRSMSKAA*NSAIIS Trigger: AGAGATGATCGCTGAGTTCAAGGCTGCCTTTGACAT...AGATCGCGTGTCCCTAGGGTGTGGGAGACTCCGCCCTGCCGGGTCCCCACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS GCA 90 bp | TTGTCGCCGTCTTTCATCAGAGATTCGATCTCCTCGTCCGTCACGTaGTCCCCGGAGGCCCTGAAAATCTCAGCCAGCTCCTCCGGGTCG | + |
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Preference number: 5 (lower is better) Translates to: LSPSFIRDSISSSVT*SPEALKISASSSGS Trigger: CGACCCGGAGGAGCTGGCTGAGATTTTCAGGGCCTCCGGGGAGCACGTGACGGACGAGGAGATCGAATCTCTGATGAAAGACGGCGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS GCA 90 bp | CCTCAGCCTGCTGGTCCGTCCTCTCTGGTCCTCAGTTTCCCTGTTTaGCTACTTCCCATGTGTGAGGTTCAAATCAGATTGTGCAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: PQPAGPSSLVLSFPV*LLPMCEVQIRLCKP Trigger: AGGCTTGCACAATCTGATTTGAACCTCACACATGGGAAGTAGGCAAACAGGGAAACTGAGGACCAGAGAGGACGGACCAGCAGGCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS CAA 72 bp | GGTCCGTCATGGTTGCTGGTGACCGGGACTCCTCTGTaGCAGGTCGCCTCCTTTGCACTCCACCACCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GPSWLLVTGTPL*QVASFALHHPK Trigger: CTTTGGGTGGTGGAGTGCAAAGGAGGCGACCTGCAACAGAGGAGTCCCGGTCACCAGCAACCATGACGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372555.8 |
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| CDS CCA 72 bp | AATCAGATTGTGCAAGCCTGTGAACACTGGCCGGACTaGGATGACTCTGCGGCAGGCCTGGGACTCCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: NQIVQACEHWPD*DDSAAGLGLPQ Trigger: CTGAGGGAGTCCCAGGCCTGCCGCAGAGTCATCCCAGTCCGGCCAGTGTTCACAGGCTTGCACAATCTGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS TCA 72 bp | TCCCTTTCGCGTCCTCTTTCATCTGGCGCACCATCATaGCCAAGAACTCCTCGAAGTCGATGGTGCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLSRPLSSGAPS*PRTPRSRWCRC Trigger: GCAGCGGCACCATCGACTTCGAGGAGTTCTTGGTCATGATGGTGCGCCAGATGAAAGAGGACGCGAAAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS GCA 72 bp | TCTTTCATCAGAGATTCGATCTCCTCGTCCGTCACGTaGTCCCCGGAGGCCCTGAAAATCTCAGCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFIRDSISSSVT*SPEALKISASS Trigger: GGAGCTGGCTGAGATTTTCAGGGCCTCCGGGGAGCACGTGACGGACGAGGAGATCGAATCTCTGATGAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000372555.8 ENST00000372557.1 |
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| CDS GCA 72 bp | TGCCTACTTCCCATGTGTGAGGTTCAAATCAGATTGTaGAAGCCTGTGAACACTGGCCGGACTGGGATGACT | + |
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Preference number: 6 (lower is better) Translates to: CLLPMCEVQIRL*KPVNTGRTGMT Trigger: AGTCATCCCAGTCCGGCCAGTGTTCACAGGCTTGCACAATCTGATTTGAACCTCACACATGGGAAGTAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS CAA 72 bp | GTTTGCCTACTTCCCATGTGTGAGGTTCAAATCAGATaGTGCAAGCCTGTGAACACTGGCCGGACTGGGATG | + |
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Preference number: 6 (lower is better) Translates to: VCLLPMCEVQIR*CKPVNTGRTGM Trigger: CATCCCAGTCCGGCCAGTGTTCACAGGCTTGCACAATCTGATTTGAACCTCACACATGGGAAGTAGGCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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| CDS TCA 72 bp | GGTCCTCAGTTTCCCTGTTTGCCTACTTCCCATGTGTaGGGTTCAAATCAGATTGTGCAAGCCTGTGAACAC | + |
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Preference number: 6 (lower is better) Translates to: GPQFPCLPTSHV*GSNQIVQACEH Trigger: GTGTTCACAGGCTTGCACAATCTGATTTGAACCTCACACATGGGAAGTAGGCAAACAGGGAAACTGAGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372557.1 |
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