RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNN (Homo sapiens)

Ensembl gene IDs: ENSG00000120332

Ensembl transcript IDs: ENST00000239462.9, ENST00000621086.1, ENST00000622870.4

Found 479 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAAGCTaGCACAGCTGGTGGTGTCTCCTGCGAGGACTGCTCACACGGGCC +
Preference number: 1 (lower is better)
Translates to: EHSQTAVTTTHPAPS*HSWWCLLRGLLTRA
Trigger: GGCCCGTGTGAGCAGTCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR TCA 90 bp GACATGATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTaGCCACTACCCACCCCGCCCCAAGCTGCCACAGCTGGTGGTGTC +
Preference number: 1 (lower is better)
Translates to: DMICSAGYLSTPRPQ*PLPTPPQAATAGGV
Trigger: GACACCACCAGCTGTGGCAGCTTGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR CCA 90 bp TGCAGGGCGGGGAAAAGAGGGAGTCTGAGGCCTGGTGGGCATGAATaGGAGTTGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACA +
Preference number: 1 (lower is better)
Translates to: CRAGKRGSLRPGGHE*ELQKSLWEEPIIKT
Trigger: TGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAACTCCCATTCATGCCCACCAGGCCTCAGACTCCCTCTTTTCCCCGCCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR TCA 90 bp AAAATGCAGGTGAGAGGGAAGGAACCTCCATGGCTTGAAGCTTGGTaGCATGATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCA +
Preference number: 1 (lower is better)
Translates to: KMQVRGKEPPWLEAW*HDLFCGLSEHSQTA
Trigger: TGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATCATGTCACCAAGCTTCAAGCCATGGAGGTTCCTTCCCTCTCACCTGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR CCA 90 bp AGTCTGAGGCCTGGTGGGCATGAATGGGAGTTGCAGAAGAGTCTTTaGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTTGAA +
Preference number: 1 (lower is better)
Translates to: SLRPGGHEWELQKSL*EEPIIKTVKLFKVE
Trigger: TTCAACTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAACTCCCATTCATGCCCACCAGGCCTCAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR TCA 90 bp TCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCTaGGAAACCTTGCCGTTCCAGTACTGTCTTTCCTACACATACTGT +
Preference number: 1 (lower is better)
Translates to: SFSCPNPVYMLLKIS*ETLPFQYCLSYTYC
Trigger: ACAGTATGTGTAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR-3UTR GCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTCACCCCGCCCCAAGCTaGCACAGCTGGTGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSHPAPS*HSWWCL
Trigger: GAGACACCACCAGCTGTGGCAGCTTGGGGCGGGGTG...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR-3UTR CCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTCCAAGCTGCCACAGCTaGTGGTGTCTCCTGCGAGGA +
Preference number: 2 (lower is better)
Translates to: KRPVVSALTPGSSELLLCPSCHS*WCLLRG
Trigger: TCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGG...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR-3UTR GCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGGCTGGTGGTGTCTCCTaGGAGGACTGCTCACACGGG +
Preference number: 2 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLAGGVS*EDCSHG
Trigger: CCCGTGTGAGCAGTCCTCGCAGGAGACACCACCAGC...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR-3UTR GCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCCAACTGGTGAAGTaGTGGGTGATTCCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCFQLVK*WVIPSL
Trigger: AAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAA...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR-3UTR TCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTTTGCTGAAGATAAGCTaGGAAACCTTGCCGTTCCAG +
Preference number: 2 (lower is better)
Translates to: KRPVVSALTPGSSELLLCLLKIS*ETLPFQ
Trigger: CTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAA...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR-3UTR TCA 90 bp AAACCCAGGGCTCCAATAGTGCAGGGCGGGGAAAAGAGGGAGTCTGAGGCCTGGACGCAATTATGCAAATaGCTGAAAAGAGGGCACTTA +
Preference number: 2 (lower is better)
Translates to: KPRAPIVQGGEKRESEAWTQLCK*LKRGHL
Trigger: TAAGTGCCCTCTTTTCAGTCATTTGCATAATTGCGT...CCAGGCCTCAGACTCCCTCTTTTCCCCGCCCTGCACTATTGGAGCCCTGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR CAA 90 bp GCGGGGAAAAGAGGGAGTCTGAGGCCTGGTGGGCATGAATGGGAGTaGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAA +
Preference number: 2 (lower is better)
Translates to: AGKRGSLRPGGHEWE*QKSLWEEPIIKTVK
Trigger: TTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAACTCCCATTCATGCCCACCAGGCCTCAGACTCCCTCTTTTCCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR-3UTR GCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAGCTGGTGGTGTCTCCTaGGAGGACTGCTCACACGGG +
Preference number: 2 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLAGGVS*EDCSHG
Trigger: CCCGTGTGAGCAGTCCTCGCAGGAGACACCACCAGC...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR-3UTR CCA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATCCAAGCTGCCACAGCTaGTGGTGTCTCCTGCGAGGA +
Preference number: 2 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYPSCHS*WCLLRG
Trigger: TCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGG...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR-3UTR GCA 90 bp AAACCCAGGGCTCCAATAGTGCAGGGCGGGGAAAAGAGGGAGTCTGAGGCCTGGTTTATTCACAACATATaGAGCTCTATGGACGCAATT +
Preference number: 2 (lower is better)
Translates to: KPRAPIVQGGEKRESEAWFIHNI*SSMDAI
Trigger: AATTGCGTCCATAGAGCTGCATATGTTGTGAATAAA...CCAGGCCTCAGACTCCCTCTTTTCCCCGCCCTGCACTATTGGAGCCCTGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR-3UTR GCA 90 bp GTTGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAACACCCCGCCCCAAGCTaGCACAGCTGGTGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: VAEESLGGTNYQDSQIIQHPAPS*HSWWCL
Trigger: GAGACACCACCAGCTGTGGCAGCTTGGGGCGGGGTG...TTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR-3UTR GCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTCTTTGGTCTCCAGCATaGTGGATACAAGTCAGAACT +
Preference number: 2 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSLWSPA*WIQVRT
Trigger: AGTTCTGACTTGTATCCAGCATGCTGGAGACCAAAG...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR-3UTR TCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAGTTCTGCGGGCTATCTaGGCACTCCCAGACCGCAGT +
Preference number: 2 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQVLRAI*ALPDRS
Trigger: ACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAAC...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR-3UTR CCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAACCAAGCTGCCACAGCTaGTGGTGTCTCCTGCGAGGA +
Preference number: 2 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQPSCHS*WCLLRG
Trigger: TCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGG...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR-3UTR TCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGTTCTGCGGGCTATCTaGGCACTCCCAGACCGCAGT +
Preference number: 2 (lower is better)
Translates to: TYCATTILIFKTLIKTGKVLRAI*ALPDRS
Trigger: ACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAAC...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR-3UTR GCA 90 bp TTACTTCATTGGTCACTGATTTTGCTACAGAAAACCCTCCAAAGTGATAGAAAAGCTGGTGGTGTCTCCTaGGAGGACTGCTCACACGGG +
Preference number: 2 (lower is better)
Translates to: LLHWSLILLQKTLQSDRKAGGVS*EDCSHG
Trigger: CCCGTGTGAGCAGTCCTCGCAGGAGACACCACCAGC...TTTTCTATCACTTTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATGAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239462.9
3UTR-3UTR TCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCTGGCTTGAAGCTTGGTaGCATGATTTGTTCTGCGGG +
Preference number: 2 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISWLEAW*HDLFCG
Trigger: CCCGCAGAACAAATCATGTCACCAAGCTTCAAGCCA...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR-3UTR TCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAATGGCTTGAAGCTTGGTaGCATGATTTGTTCTGCGGG +
Preference number: 2 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQWLEAW*HDLFCG
Trigger: CCCGCAGAACAAATCATGTCACCAAGCTTCAAGCCA...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR CAA 90 bp CCGTTCCAGTACTGTCTTTCCTACACATACTGTGCAACTACTATTTaGATTTTCAAGACCCTCATAAAGACGGGCAAAAATGCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: PFQYCLSYTYCATTI*IFKTLIKTGKNAGE
Trigger: CTCACCTGCATTTTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAGTACTGGAACGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR-3UTR GCA 90 bp TGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGCTTTGGTCTCCAGCATaGTGGATACAAGTCAGAACT +
Preference number: 2 (lower is better)
Translates to: CRRVFGRNQLSRQSNYSKLWSPA*WIQVRT
Trigger: AGTTCTGACTTGTATCCAGCATGCTGGAGACCAAAG...CTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR-3UTR GCA 90 bp TGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGGGTGATTCCTTCTCTTaGCCTAATCCAGTATATATG +
Preference number: 2 (lower is better)
Translates to: CRRVFGRNQLSRQSNYSKGDSFS*PNPVYM
Trigger: CATATATACTGGATTAGGGCAAGAGAAGGAATCACC...CTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR-3UTR CCA 90 bp TTACTTCATTGGTCACTGATTTTGCTACAGAAAACCCTCCAAAGTGATAGAAAATTGCAGAAGAGTCTTTaGGAGGAACCAATTATCAAG +
Preference number: 2 (lower is better)
Translates to: LLHWSLILLQKTLQSDRKLQKSL*EEPIIK
Trigger: CTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAA...TTTTCTATCACTTTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATGAAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239462.9
3UTR CCA 72 bp GTGACCACTACCCACCCCGCCCCAAGCTGCCACAGCTaGTGGTGTCTCCTGCGAGGACTGCTCACACGGGCC +
Preference number: 3 (lower is better)
Translates to: VTTTHPAPSCHS*WCLLRGLLTRA
Trigger: GGCCCGTGTGAGCAGTCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGGGGCGGGGTGGGTAGTGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR GCA 72 bp CAGACCGCAGTGACCACTACCCACCCCGCCCCAAGCTaGCACAGCTGGTGGTGTCTCCTGCGAGGACTGCTC +
Preference number: 3 (lower is better)
Translates to: QTAVTTTHPAPS*HSWWCLLRGLL
Trigger: GAGCAGTCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR TCA 72 bp GGCTCCAATAGTGCAGGGCGGGGAAAAGAGGGAGTCTaGGGCCTGGTGGGCATGAATGGGAGTTGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: GSNSAGRGKEGV*GLVGMNGSCRR
Trigger: TCTTCTGCAACTCCCATTCATGCCCACCAGGCCTCAGACTCCCTCTTTTCCCCGCCCTGCACTATTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR TCA 72 bp GTGAGAGGGAAGGAACCTCCATGGCTTGAAGCTTGGTaGCATGATTTGTTCTGCGGGCTATCTGAGCACTCC +
Preference number: 3 (lower is better)
Translates to: VRGKEPPWLEAW*HDLFCGLSEHS
Trigger: GGAGTGCTCAGATAGCCCGCAGAACAAATCATGTCACCAAGCTTCAAGCCATGGAGGTTCCTTCCCTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR TCA 72 bp TTTCAAGACCCTCATAAAGACGGGCAAAAATGCAGGTaGGAGGGAAGGAACCTCCATGGCTTGAAGCTTGGT +
Preference number: 3 (lower is better)
Translates to: FQDPHKDGQKCR*EGRNLHGLKLG
Trigger: ACCAAGCTTCAAGCCATGGAGGTTCCTTCCCTCTCACCTGCATTTTTGCCCGTCTTTATGAGGGTCTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR GCA 72 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTaGTTCTTTCCAGAGAAAAGATTTGCATTAGCAGAA +
Preference number: 3 (lower is better)
Translates to: SPNPWVIRTPPL*FFPEKRFALAE
Trigger: TTCTGCTAATGCAAATCTTTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR CCA 72 bp CCTGGTGGGCATGAATGGGAGTTGCAGAAGAGTCTTTaGGAGGAACCAATTATCAAGACAGTCAAATTATTC +
Preference number: 3 (lower is better)
Translates to: PGGHEWELQKSL*EEPIIKTVKLF
Trigger: GAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAACTCCCATTCATGCCCACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR TCA 72 bp TGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCTaGGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAC +
Preference number: 3 (lower is better)
Translates to: CPNPVYMLLKIS*ETLPFQYCLSY
Trigger: GTAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATATATACTGGATTAGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAATGCTGCTGCTCCTGTaGGCCGGTCTCCTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPMLLLL*AGLLLP
Trigger: CGGCAGGAGGAGACCGGCTCACAGGAGCAGCAGCAT...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCACCTGCAGGGGCCGGCTaGCATCGCCATGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPPAGAG*HRHAGR
Trigger: TCTACCTGCATGGCGATGCCAGCCGGCCCCTGCAGG...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAGTTCTGCGGGCTATCTaGGCACTCCCAGACCGCAGT +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPVLRAI*ALPDRS
Trigger: ACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAAC...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAGGAGGTCCTGGACACTaGCTGCCAACTCGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPGGPGH*LPTRSP
Trigger: AGGACTGCGAGTTGGCAGGCAGTGTCCAGGACCTCC...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCATCCTTCTGTGGCGTCTaGAGGCGGATGTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPSFCGV*RRMLCL
Trigger: CAGGCACAACATCCGCCTTCAGACGCCACAGAAGGA...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCATGCTCTTGGGCACAGTaGCCTCAGCTACCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPCSWAQ*PQLPPV
Trigger: GACAGGAGGTAGCTGAGGTCACTGTGCCCAAGAGCA...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCGTTCTGCGGGCTATCTaGGCACTCCCAGACCGCAGT +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAVLRAI*ALPDRS
Trigger: ACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAAC...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCTGTTGCTCCTTGTTaGTGCAGCCGGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAPVAPC*CSREAP
Trigger: TGGAGCCTCCCGGCTGCAGCAACAAGGAGCAACAGG...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCCTGGCAGCAGCGCTaGGCACTACACTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAPWQQR*ALHCSF
Trigger: GAAGGAACAGTGTAGTGCCCAGCGCTGCTGCCAGGG...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAAGATCAGTGACTCCCTaGCAGCAGCGCTGGGCACTA +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPRSVTP*QQRWAL
Trigger: TAGTGCCCAGCGCTGCTGCCAGGGAGTCACTGATCT...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAGCTTTCTTGCTCCCCTaGTTGCCCCTTTCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPAFLLP*LPLSAH
Trigger: GTGGGCTGAAAGGGGCAACCAGGGGAGCAAGAAAGC...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCACCTCATACCGCGCTaGAGTGCCGGTGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAHLIPR*SAGGEV
Trigger: AACCTCACCACCGGCACTCCAGCGCGGTATGAGGTG...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCGTCCTGGACACTGCCTaGCAACTCGCAGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAVLDTA*QLAVLL
Trigger: CAGAAGGACTGCGAGTTGGCAGGCAGTGTCCAGGAC...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCACACGTAGACCTTGTATaGCTCTCCTGGCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPHVDLV*LSWLQA
Trigger: GGCCTGAAGCCAGGAGAGGCATACAAGGTCTACGTG...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAGCCAGAACTCCTTCATaGGGTCCCCAAAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPARTPS*GPQSLP
Trigger: TGGAAGGCTTTGGGGACCCCATGAAGGAGTTCTGGC...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCGTAGTCCACCTCAGTTaGGGGGTTTTCCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAVVHLS*GVFPLH
Trigger: GTGGAGTGGGAAAACCCCTCAACTGAGGTGGACTAC...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAGTCCCAGGAGACAGTTaGTGTGTCTTCAGTCACTCG +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPVPGDS*CVFSHS
Trigger: CGAGTGACTGAAGACACAGCAACTGTCTCCTGGGAC...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAGCGTCCAGGTCAATATaGCACCAGACTGCGTTACAG +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPASRSI*HQTALQ
Trigger: CTGTAACGCAGTCTGGTGGCATATTGACCTGGACGC...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCGCGTCCGCTTCTTTCTaGCCAGGACAGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCASASF*PGQAPC
Trigger: GCAGGGAGCCTGTCCTGGGCAGAAAGAAGCGGACGC...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCACCCCGCCCCAAGCTaGCACAGCTGGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHHPAPS*HSWWCL
Trigger: GAGACACCACCAGCTGTGGCAGCTTGGGGCGGGGTG...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCGGGCCAGGAGGTCCTaGACACTGCCTGCCAACTCG +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHRARRS*TLPANS
Trigger: CGAGTTGGCAGGCAGTGTCCAGGACCTCCTGGCCCG...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACAGGGAGAAGGTCCCGTaGCCGCTGCAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHREKVP*PLQWRL
Trigger: AAGCCGCCACTGCAGCGGCCACGGGACCTTCTCCCT...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp AAACCCAGGGCTCCAATAGTGCAGGGCGGGGAAAAGAGGGAGTCTGAGGCCTGGAGTGATCCACCTGGCTaGAGGGCTCCCAGCTCACCA +
Preference number: 4 (lower is better)
Translates to: KPRAPIVQGGEKRESEAWSDPPG*RAPSSP
Trigger: TGGTGAGCTGGGAGCCCTCCAGCCAGGTGGATCACT...CCAGGCCTCAGACTCCCTCTTTTCCCCGCCCTGCACTATTGGAGCCCTGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCATGTCATATCGGCTCTTaGGGTCACTGCTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPCHIGS*GHCSWA
Trigger: TGCCCAAGAGCAGTGACCCCAAGAGCCGATATGACA...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAAACGGGCACCAACTGTaGAGAGGGTGGTGGATACAT +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPNGHQL*RGWWIH
Trigger: ATGTATCCACCACCCTCTCCACAGTTGGTGCCCGTT...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCTACATACTTGTCTATaGCAGCCTGCACTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPALHTCL*QPALGP
Trigger: GGGACCCAGTGCAGGCTGTCATAGACAAGTATGTAG...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCATCAGGGCACAGTTGCTaGGTGCGATATCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPSGHSC*VRYHCL
Trigger: GAGACAATGATATCGCACTCAGCAACTGTGCCCTGA...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCGGAGGTCCTGGACACTaGCTGCCAACTCGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCGGPGH*LPTRSP
Trigger: AGGACTGCGAGTTGGCAGGCAGTGTCCAGGACCTCC...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACAGGTCCCGTGGCCGCTaGAGTGGCGGCTTAGATCAG +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHRSRGR*SGGLDQ
Trigger: CTGATCTAAGCCGCCACTGCAGCGGCCACGGGACCT...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTAGGCGGGGCCCTCCCTaGCCTCTTCGCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSRRGPP*PLRSGS
Trigger: GCTGCCACTGCGAAGAGGGCAGGGAGGGCCCCGCCT...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCTTGGGCACTTGGATCTaGTTCCCAGAGAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPALGTWI*FPESSF
Trigger: GAAGGAGCTCTCTGGGAAGCAGATCCAAGTGCCCAA...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCTGGTGTCAGCTTTCTTaGTCCCCTGGTTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAWCQLS*SPGCPF
Trigger: AAAGGGGCAACCAGGGGAGCAAGAAAGCTGACACCA...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCTTGCTCAAGGCCTTaGAACGCAAACCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAPCSRP*NANLWS
Trigger: AGACCAGAGGTTTGCGTTGCAAGGCCTTGAGCAAGG...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCTTCACCCCCTCACTGTaGTTGGTCTCCCCATATCTG +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAFTPSL*LVSPYL
Trigger: CAGATATGGGGAGACCAAGCACAGTGAGGGGGTGAA...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCAGGACAGGCTCCCTaGTGTAGCCATGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHPGQAP*CSHEGG
Trigger: TCCGCCCTCATGGCTACAGCAGGGAGCCTGTCCTGG...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp AAACCCAGGGCTCCAATAGTGCAGGGCGGGGAAAAGAGGGAGTCTGAGGCCTGGGTCTCCTGCGAGGACTaGTCACACGGGCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: KPRAPIVQGGEKRESEAWVSCED*SHGPSE
Trigger: TTCTGATGGCCCGTGTGAGCAGTCCTCGCAGGAGAC...CCAGGCCTCAGACTCCCTCTTTTCCCCGCCCTGCACTATTGGAGCCCTGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACGCTGGTGGTGTCTCCTaGGAGGACTGCTCACACGGG +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHAGGVS*EDCSHG
Trigger: CCCGTGTGAGCAGTCCTCGCAGGAGACACCACCAGC...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTCGGGCCAGGAGGTCCTaGACACTGCCTGCCAACTCG +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCRARRS*TLPANS
Trigger: CGAGTTGGCAGGCAGTGTCCAGGACCTCCTGGCCCG...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCCCGTGGCCGCTGCAGTaGCGGCTTAGATCAGTGACT +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCPWPLQ*RLRSVT
Trigger: AGTCACTGATCTAAGCCGCCACTGCAGCGGCCACGG...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACAAGTCTTCGTGGCACTaGCACACGCCGCGCACGCAC +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHKSSWH*HTPRTH
Trigger: GTGCGTGCGCGGCGTGTGCCAGTGCCACGAAGACTT...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGTGTCACAGAAGCCGTaGCCGCTGCAGTCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCVSQKP*PLQSPG
Trigger: TCCCGGCGACTGCAGCGGCCACGGCTTCTGTGACAC...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCAACGGGCACCAACTGTaGAGAGGGTGGTGGATACAT +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPANGHQL*RGWWIH
Trigger: ATGTATCCACCACCCTCTCCACAGTTGGTGCCCGTT...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCACCTGGTGGGCATGAATaGGAGTTGCAGAAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPPGGHE*ELQKSL
Trigger: AAGACTCTTCTGCAACTCCCATTCATGCCCACCAGG...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTAAGCCCCATCGTCACTaGGGGGCTGAGGGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCKPHRH*GAEGQR
Trigger: ACGCTGACCCTCAGCCCCTCAGTGACGATGGGGCTT...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp AAACCCAGGGCTCCAATAGTGCAGGGCGGGGAAAAGAGGGAGTCTGAGGCCTGGTACCACCAGCCACCATaGTGTGTCAGGGCACAGTTG +
Preference number: 4 (lower is better)
Translates to: KPRAPIVQGGEKRESEAWYHQPP*CVRAQL
Trigger: CAACTGTGCCCTGACACATCATGGTGGCTGGTGGTA...CCAGGCCTCAGACTCCCTCTTTTCCCCGCCCTGCACTATTGGAGCCCTGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCTGGCTTGAAGCTTGGTaGCATGATTTGTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAWLEAW*HDLFCG
Trigger: CCCGCAGAACAAATCATGTCACCAAGCTTCAAGCCA...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTAGAAGCCGTGGCCGCTaGAGTCGCCGGGACAGCGCT +
Preference number: 4 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSRSRGR*SRRDSA
Trigger: AGCGCTGTCCCGGCGACTGCAGCGGCCACGGCTTCT...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCATGTCAATTTCTGTCCTaGCATTCAGGAGGATCGGCT +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPCQFLS*HSGGSA
Trigger: AGCCGATCCTCCTGAATGGCAGGACAGAAATTGACA...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACACCCCGCCCCAAGCTaGCACAGCTGGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: KGGDKRPVVSALTPGSSEHPAPS*HSWWCL
Trigger: GAGACACCACCAGCTGTGGCAGCTTGGGGCGGGGTG...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTTGTGGGGTGACCACCTaGGCACAGTCCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCCGVTT*AQSRPV
Trigger: CACAGGCCTGGACTGTGCCCAGGTGGTCACCCCACA...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCATGGACGAAGGTTTCTaGGAGGGTCGAGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAMDEGF*EGRVLS
Trigger: AGACAGAACTCGACCCTCCCAGAAACCTTCGTCCAT...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCCGCCATGCAGGTAGATaGTGTACAGACCACTGGCGG +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCRHAGR*CTDHWR
Trigger: CCGCCAGTGGTCTGTACACCATCTACCTGCATGGCG...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCAAGCTGCCACAGCTaGTGGTGTCTCCTGCGAGGA +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHPSCHS*WCLLRG
Trigger: TCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGG...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACTGCAGTCCTCCGACATaGAGTCTTCGTGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHCSPPT*SLRGTG
Trigger: GCCAGTGCCACGAAGACTTCATGTCGGAGGACTGCA...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACAATCCTCCGTGTTCTTaGGCAGCTGCAGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHNPPCS*AAAGPV
Trigger: CACAGGGCCTGCAGCTGCTCAAGAACACGGAGGATT...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCAGGGGGTAGTAGCTaGGGAGGTAGTGATCCACCT +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHPGGSS*GGSDPP
Trigger: AGGTGGATCACTACCTCCTCAGCTACTACCCCCTGG...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACTGCTCTTGGGCACAGTaGCCTCAGCTACCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHCSWAQ*PQLPPV
Trigger: GACAGGAGGTAGCTGAGGTCACTGTGCCCAAGAGCA...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCCTGGAGTGCCGGTGGTaGGGTTGTGTAGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCLECRW*GCVACQ
Trigger: TTGACAAGCTACACAACCTCACCACCGGCACTCCAG...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGTTCTGCGGGCTATCTaGGCACTCCCAGACCGCAGT +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCVLRAI*ALPDRS
Trigger: ACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAAC...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCACTTTGGTCTCCAGCATaGTGGATACAAGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPLWSPA*WIQVRT
Trigger: AGTTCTGACTTGTATCCAGCATGCTGGAGACCAAAG...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCGACCTTGGTACTTGCTaGTCGTCCCTGGTTCTCGTC +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCDLGTC*SSLVLV
Trigger: GACGAGAACCAGGGACGACCAGCAAGTACCAAGGTC...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CCA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAAAGGGAGAAGGTCCCGTaGCCGCTGCAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKREKVP*PLQWRL
Trigger: AAGCCGCCACTGCAGCGGCCACGGGACCTTCTCCCT...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGACATGAAGTCTTCGTaGCACTGGCACACGCCGCGC +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCDMKSS*HWHTPR
Trigger: GCGCGGCGTGTGCCAGTGCCACGAAGACTTCATGTC...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTGTGTCACAGAAGCCGTaGCCGCTGCAGTCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSVSQKP*PLQSPG
Trigger: TCCCGGCGACTGCAGCGGCCACGGCTTCTGTGACAC...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACGCAGTCCGAAGGGTGTaGGAAACGGGCACCAACTGT +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHAVRRV*ETGTNC
Trigger: ACAGTTGGTGCCCGTTTCCCACACCCTTCGGACTGC...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp AAACCCAGGGCTCCAATAGTGCAGGGCGGGGAAAAGAGGGAGTCTGAGGCCTGGTGGTGTACAGACCACTaGCGGCATTGCTGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KPRAPIVQGGEKRESEAWWCTDH*RHCCSA
Trigger: AGCAGAACAGCAATGCCGCCAGTGGTCTGTACACCA...CCAGGCCTCAGACTCCCTCTTTTCCCCGCCCTGCACTATTGGAGCCCTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCTATACCGCTCCTTGCTaGAGGCCACTTGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAYTAPC*RPLGRN
Trigger: ATTTCTTCCAAGTGGCCTCCAGCAAGGAGCGGTATA...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACGTAGTCCACCTCAGTTaGGGGGTTTTCCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHVVHLS*GVFPLH
Trigger: GTGGAGTGGGAAAACCCCTCAACTGAGGTGGACTAC...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTCCGGGTGCAGACCAGTaGTGTCATATCGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCPGADQ*CHIGSW
Trigger: CCAAGAGCCGATATGACATCACTGGTCTGCACCCGG...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAGGCGGGGCCCTCCCTaGCCTCTTCGCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLRRGPP*PLRSGS
Trigger: GCTGCCACTGCGAAGAGGGCAGGGAGGGCCCCGCCT...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTGGTGTCAGCTTTCTTaGTCCCCTGGTTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCWCQLS*SPGCPF
Trigger: AAAGGGGCAACCAGGGGAGCAAGAAAGCTGACACCA...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCGCGTCCAGGTCAATATaGCACCAGACTGCGTTACAG +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCASRSI*HQTALQ
Trigger: CTGTAACGCAGTCTGGTGGCATATTGACCTGGACGC...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACTGCTCCTTGGGCACTTaGATCTGCTTCCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHCSLGT*ICFPES
Trigger: GCTCTCTGGGAAGCAGATCCAAGTGCCCAAGGAGCA...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCAGCAAGGTCTGTGGTaGCAAGTAGATGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHQQGLW*QVDAVG
Trigger: GCCCACAGCATCTACTTGCCACCACAGACCTTGCTG...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTCTTGTATGCCTCTCCTaGCTTCAGGCCCGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCLVCLS*LQARQD
Trigger: GTCCTGACGGGCCTGAAGCCAGGAGAGGCATACAAG...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAATGCAGTCCTCCGACATaGAGTCTTCGTGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: KGGDKRPVVSALTPGSSECSPPT*SLRGTG
Trigger: GCCAGTGCCACGAAGACTTCATGTCGGAGGACTGCA...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp AAACCCAGGGCTCCAATAGTGCAGGGCGGGGAAAAGAGGGAGTCTGAGGCCTGGTTGCTGAAGATAAGCTaGGAAACCTTGCCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: KPRAPIVQGGEKRESEAWLLKIS*ETLPFQ
Trigger: CTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAA...CCAGGCCTCAGACTCCCTCTTTTCCCCGCCCTGCACTATTGGAGCCCTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCGTGGTGGCAAGTAGATaGTGTGGGCTGCTAGAAACT +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCVVASR*CGLLET
Trigger: AGTTTCTAGCAGCCCACAGCATCTACTTGCCACCAC...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp AAACCCAGGGCTCCAATAGTGCAGGGCGGGGAAAAGAGGGAGTCTGAGGCCTGGTGTCAATTTCTGTCCTaGCATTCAGGAGGATCGGCT +
Preference number: 4 (lower is better)
Translates to: KPRAPIVQGGEKRESEAWCQFLS*HSGGSA
Trigger: AGCCGATCCTCCTGAATGGCAGGACAGAAATTGACA...CCAGGCCTCAGACTCCCTCTTTTCCCCGCCCTGCACTATTGGAGCCCTGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACGCGTCCAGGTCAATATaGCACCAGACTGCGTTACAG +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHASRSI*HQTALQ
Trigger: CTGTAACGCAGTCTGGTGGCATATTGACCTGGACGC...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGAGCATCCCCTGCCGTaGCTCTGTATTTCCCAACTG +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCEHPLP*LCISQL
Trigger: CAGTTGGGAAATACAGAGGCACGGCAGGGGATGCTC...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACTTCACCCCCTCACTGTaGTTGGTCTCCCCATATCTG +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHFTPSL*LVSPYL
Trigger: CAGATATGGGGAGACCAAGCACAGTGAGGGGGTGAA...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAGGTGATTCCTTCTCTTaGCCTAATCCAGTATATATG +
Preference number: 4 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPGDSFS*PNPVYM
Trigger: CATATATACTGGATTAGGGCAAGAGAAGGAATCACC...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAACCCTGGCAGCAGCGCTaGGCACTACACTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKPWQQR*ALHCSF
Trigger: GAAGGAACAGTGTAGTGCCCAGCGCTGCTGCCAGGG...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAAGGGAGACAGGGTAGGTaGCGCCTTGCTCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKGRQGR*RLAQGL
Trigger: AAGGCCTTGAGCAAGGCGCCACCTACCCTGTCTCCC...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTCACCTCATACCGCGCTaGAGTGCCGGTGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSHLIPR*SAGGEV
Trigger: AACCTCACCACCGGCACTCCAGCGCGGTATGAGGTG...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTCCAAGCTGCCACAGCTaGTGGTGTCTCCTGCGAGGA +
Preference number: 4 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSPSCHS*WCLLRG
Trigger: TCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGG...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAATCCTTCTGTGGCGTCTaGAGGCGGATGTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKSFCGV*RRMLCL
Trigger: CAGGCACAACATCCGCCTTCAGACGCCACAGAAGGA...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAATGCTCTTGGGCACAGTaGCCTCAGCTACCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKCSWAQ*PQLPPV
Trigger: GACAGGAGGTAGCTGAGGTCACTGTGCCCAAGAGCA...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTGGAGTGCCGGTGGTaGGGTTGTGTAGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: KGGDKRPVVSALTPGSSELECRW*GCVACQ
Trigger: TTGACAAGCTACACAACCTCACCACCGGCACTCCAG...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTGCTGAAGATAAGCTaGGAAACCTTGCCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCLLKIS*ETLPFQ
Trigger: CTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAA...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAACTGTCACCCAGGCAGTaGCAAGCACAGCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKLSPRQ*QAQQGL
Trigger: CAGACCTTGCTGTGCTTGGCACTGCCTGGGTGACAG...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGTCCCAGGAGACAGTTaGTGTGTCTTCAGTCACTCG +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCVPGDS*CVFSHS
Trigger: CGAGTGACTGAAGACACAGCAACTGTCTCCTGGGAC...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACACGTAGACCTTGTATaGCTCTCCTGGCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KGGDKRPVVSALTPGSSEHVDLV*LSWLQA
Trigger: GGCCTGAAGCCAGGAGAGGCATACAAGGTCTACGTG...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCAGTGACAACATTGGTTaGACTGTCAATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPASDNIG*TVNFCP
Trigger: AGGACAGAAATTGACAGTCCAACCAATGTTGTCACT...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAAGCAGTCCGAAGGGTGTaGGAAACGGGCACCAACTGT +
Preference number: 4 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKAVRRV*ETGTNC
Trigger: ACAGTTGGTGCCCGTTTCCCACACCCTTCGGACTGC...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACCCCCTCACTGTGCTTaGTCTCCCCATATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: KGGDKRPVVSALTPGSSEPPHCA*SPHICH
Trigger: ATGGCAGATATGGGGAGACCAAGCACAGTGAGGGGG...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAAAGCTCCTCCATCGCTTaGAGAAATCCAGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKSSSIA*RNPAAQ
Trigger: CTGGGCAGCTGGATTTCTTCAAGCGATGGAGGAGCT...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAACTGACAGTGACCTGTTaGTCCTTGTTGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKLTVTC*SLLLQP
Trigger: CGGCTGCAGCAACAAGGAGCAACAGGTCACTGTCAG...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGACTCGCCGTGTCCGCTaGAGTTCTCAGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKTRRVR*SSQGRP
Trigger: CGGCCTGCCCTGAGAACTGCAGCGGACACGGCGAGT...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCAGAAGCCGTGGCCGCTaGAGTCGCCGGGACAGCGCT +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISRSRGR*SRRDSA
Trigger: AGCGCTGTCCCGGCGACTGCAGCGGCCACGGCTTCT...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACTGTCAATTTCTGTCCTaGCATTCAGGAGGATCGGCT +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHCQFLS*HSGGSA
Trigger: AGCCGATCCTCCTGAATGGCAGGACAGAAATTGACA...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACAATATGCCACCAGACTaGGTTACAGCAGATGGACGA +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHNMPPD*VTADGR
Trigger: TCGTCCATCTGCTGTAACGCAGTCTGGTGGCATATT...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTGACCACTGGCGGCATTaGTGTTCTGCTGAACCTGAC +
Preference number: 4 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSDHWRH*CSAEPD
Trigger: GTCAGGTTCAGCAGAACAGCAATGCCGCCAGTGGTC...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGGTGTCACAGAAGCCGTaGCCGCTGCAGTCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKVSQKP*PLQSPG
Trigger: TCCCGGCGACTGCAGCGGCCACGGCTTCTGTGACAC...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCAGCTGCAGGCCCTGTaGGGTGACCACCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLQLQAL*GDHLGT
Trigger: TGTGCCCAGGTGGTCACCCCACAGGGCCTGCAGCTG...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAAAGCTGTGCTGCTCCTTaGGCACTTGGATCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKSCAAP*ALGSAS
Trigger: GGAAGCAGATCCAAGTGCCCAAGGAGCAGCACAGCT...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTCAGCAAGGTCTGTGGTaGCAAGTAGATGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSQQGLW*QVDAVG
Trigger: GCCCACAGCATCTACTTGCCACCACAGACCTTGCTG...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTCCACCAGAACCTCTCTaGTCTCTTGGTCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSPPEPL*SLGRQQ
Trigger: CTGCTGACGACCAAGAGACCAGAGAGGTTCTGGTGG...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCCAGTCACTAGGTTTTTaGGGCCGTCAATTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCQSLGF*GRQFLS
Trigger: AGACAGAAATTGACGGCCCCAAAAACCTAGTGACTG...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTATGGACGAAGGTTTCTaGGAGGGTCGAGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCMDEGF*EGRVLS
Trigger: AGACAGAACTCGACCCTCCCAGAAACCTTCGTCCAT...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAAAACGGGCACCAACTGTaGAGAGGGTGGTGGATACAT +
Preference number: 4 (lower is better)
Translates to: KGGDKRPVVSALTPGSSENGHQL*RGWWIH
Trigger: ATGTATCCACCACCCTCTCCACAGTTGGTGCCCGTT...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGCCTGCAGGGGCCGGCTaGCATCGCCATGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKPAGAG*HRHAGR
Trigger: TCTACCTGCATGGCGATGCCAGCCGGCCCCTGCAGG...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATGGCGGCTTAGATCAGTaGCTCCCTGGCAGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYGGLDQ*LPGSSA
Trigger: AGCGCTGCTGCCAGGGAGTCACTGATCTAAGCCGCC...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTCAATGGGAAAGGAGGTaGCAAACGTCCGGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSQWERR*QTSGCL
Trigger: GAGACAACCGGACGTTTGTCACCTCCTTTCCCATTG...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGTGGGAGGCTGCTGGGTaGCTCTTCCAATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLWEAAG*LFQCCC
Trigger: GCAGCAGCATTGGAAGAGGCACCCAGCAGCCTCCCA...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR GCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGAGGTCCCGTGGCCGCTaGAGTGGCGGCTTAGATCAG +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLRSRGR*SGGLDQ
Trigger: CTGATCTAAGCCGCCACTGCAGCGGCCACGGGACCT...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAACTCGCCGTGTCCGCTaGAGTTCTCAGGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLTRRVR*SSQGRP
Trigger: CGGCCTGCCCTGAGAACTGCAGCGGACACGGCGAGT...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTGTCCCAGGAGACAGTTaGTGTGTCTTCAGTCACTCG +
Preference number: 4 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSVPGDS*CVFSHS
Trigger: CGAGTGACTGAAGACACAGCAACTGTCTCCTGGGAC...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp AACAGTAAGACTCACGGTGCTGAGCACTCCCACAAAACCCAGGGCTCCAATAGTCCTTGCTCAAGGCCTTaGAACGCAAACCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: NSKTHGAEHSHKTQGSNSPCSRP*NANLWS
Trigger: AGACCAGAGGTTTGCGTTGCAAGGCCTTGAGCAAGG...ACTATTGGAGCCCTGGGTTTTGTGGGAGTGCTCAGCACCGTGAGTCTTACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCCAGGACAGGCTCCCTaGTGTAGCCATGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLPGQAP*CSHEGG
Trigger: TCCGCCCTCATGGCTACAGCAGGGAGCCTGTCCTGG...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGGCTGGTGGTGTCTCCTaGGAGGACTGCTCACACGGG +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLAGGVS*EDCSHG
Trigger: CCCGTGTGAGCAGTCCTCGCAGGAGACACCACCAGC...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTACACCCCGCCCCAAGCTaGCACAGCTGGTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLHPAPS*HSWWCL
Trigger: GAGACACCACCAGCTGTGGCAGCTTGGGGCGGGGTG...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGAAGTCTTCGTGGCACTaGCACACGCCGCGCACGCAC +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKKSSWH*HTPRTH
Trigger: GTGCGTGCGCGGCGTGTGCCAGTGCCACGAAGACTT...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCCATAGGCAGATTCATTaGCAGTCTGTAAATCCACTC +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCHRQIH*QSVNPL
Trigger: GAGTGGATTTACAGACTGCCAATGAATCTGCCTATG...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCACTCCACGTAAGGAATaGAGAATTCATGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCTPRKE*RIHVLS
Trigger: GGAAAGGACATGAATTCTCCATTCCTTACGTGGAGT...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCGGCGGCTTAGATCAGTaGCTCCCTGGCAGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISGGLDQ*LPGSSA
Trigger: AGCGCTGCTGCCAGGGAGTCACTGATCTAAGCCGCC...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAGCAGGCCCTGTGGGGTaGCCACCTGGGCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQAGPVG*PPGHSP
Trigger: TGGACTGTGCCCAGGTGGTCACCCCACAGGGCCTGC...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGCCGGGTGCAGACCAGTaGTGTCATATCGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLPGADQ*CHIGSW
Trigger: CCAAGAGCCGATATGACATCACTGGTCTGCACCCGG...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACAGTCACTCGATCAGTaGCAACATTGGTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: KGGDKRPVVSALTPGSSEQSLDQ*QHWLDC
Trigger: ACAGTCCAACCAATGTTGTCACTGATCGAGTGACTG...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGGGGTGCCTCTTCCAATaGTGCTGCTCCTGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKGCLFQ*CCSCEP
Trigger: CGGCTCACAGGAGCAGCAGCATTGGAAGAGGCACCC...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR GCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGGGAGGTCCTGGACACTaGCTGCCAACTCGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKGGPGH*LPTRSP
Trigger: AGGACTGCGAGTTGGCAGGCAGTGTCCAGGACCTCC...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGAGGCGGGGCCCTCCCTaGCCTCTTCGCAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CRRVFGRNQLSRQSNYSKRRGPP*PLRSGS
Trigger: GCTGCCACTGCGAAGAGGGCAGGGAGGGCCCCGCCT...CTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAACTGCTCTCATCCTTGTaGACTGCCATTTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKLLSSL*TAISLV
Trigger: CACCAAGGAAATGGCAGTGCACAAGGATGAGAGCAG...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGTCTTGCTCCCCTGGTTaGCCCTTTCAGCCCACACGT +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLSCSPG*PFQPTR
Trigger: ACGTGTGGGCTGAAAGGGGCAACCAGGGGAGCAAGA...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCCCTGGCAGCAGCGCTaGGCACTACACTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLPWQQR*ALHCSF
Trigger: GAAGGAACAGTGTAGTGCCCAGCGCTGCTGCCAGGG...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGAGTGATCCACCTGGCTaGAGGGCTCCCAGCTCACCA +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLSDPPG*RAPSSP
Trigger: TGGTGAGCTGGGAGCCCTCCAGCCAGGTGGATCACT...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGCTTGTATGCCTCTCCTaGCTTCAGGCCCGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLLVCLS*LQARQD
Trigger: GTCCTGACGGGCCTGAAGCCAGGAGAGGCATACAAG...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGGCAGTCCGAAGGGTGTaGGAAACGGGCACCAACTGT +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLAVRRV*ETGTNC
Trigger: ACAGTTGGTGCCCGTTTCCCACACCCTTCGGACTGC...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCATAGGCAGATTCATTaGCAGTCTGTAAATCCACTC +
Preference number: 4 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHHRQIH*QSVNPL
Trigger: GAGTGGATTTACAGACTGCCAATGAATCTGCCTATG...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAGGGTCAGCGTCAACCTaGACCAAGGCAGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLGSAST*TKADLG
Trigger: GCCCAAGTCTGCCTTGGTTCAGGTTGACGCTGACCC...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGTCCTTCTGTGGCGTCTaGAGGCGGATGTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKSFCGV*RRMLCL
Trigger: CAGGCACAACATCCGCCTTCAGACGCCACAGAAGGA...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGCAGGCCCTGTGGGGTaGCCACCTGGGCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKAGPVG*PPGHSP
Trigger: TGGACTGTGCCCAGGTGGTCACCCCACAGGGCCTGC...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGAATCCTCCGTGTTCTTaGGCAGCTGCAGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLNPPCS*AAAGPV
Trigger: CACAGGGCCTGCAGCTGCTCAAGAACACGGAGGATT...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGAATCCTCCGTGTTCTTaGGCAGCTGCAGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKNPPCS*AAAGPV
Trigger: CACAGGGCCTGCAGCTGCTCAAGAACACGGAGGATT...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCCAGGGGGTAGTAGCTaGGGAGGTAGTGATCCACCT +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLPGGSS*GGSDPP
Trigger: AGGTGGATCACTACCTCCTCAGCTACTACCCCCTGG...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGCCGGGTGCAGACCAGTaGTGTCATATCGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKPGADQ*CHIGSW
Trigger: CCAAGAGCCGATATGACATCACTGGTCTGCACCCGG...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGTCATGGGCACCACCGTaGTCTTATACTCAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLSWAPP*SYTQSP
Trigger: CGGGGACTGAGTATAAGATCACGGTGGTGCCCATGA...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGTGCCTCTTCCAATGCTaGTGCTCCTGTGAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLCLFQC*CSCEPV
Trigger: GACCGGCTCACAGGAGCAGCAGCATTGGAAGAGGCA...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR GCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCCCTGTTGCTCCTTGTTaGTGCAGCCGGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISPVAPC*CSREAP
Trigger: TGGAGCCTCCCGGCTGCAGCAACAAGGAGCAACAGG...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGAGAAGCCGTGGCCGCTaGAGTCGCCGGGACAGCGCT +
Preference number: 4 (lower is better)
Translates to: CRRVFGRNQLSRQSNYSKRSRGR*SRRDSA
Trigger: AGCGCTGTCCCGGCGACTGCAGCGGCCACGGCTTCT...CTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGGACCACTGGCGGCATTaGTGTTCTGCTGAACCTGAC +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLDHWRH*CSAEPD
Trigger: GTCAGGTTCAGCAGAACAGCAATGCCGCCAGTGGTC...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGGTCTCCTGCGAGGACTaGTCACACGGGCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKVSCED*SHGPSE
Trigger: TTCTGATGGCCCGTGTGAGCAGTCCTCGCAGGAGAC...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTTTGGTCTCCAGCATaGTGGATACAAGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: KGGDKRPVVSALTPGSSELWSPA*WIQVRT
Trigger: AGTTCTGACTTGTATCCAGCATGCTGGAGACCAAAG...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTACCGTGGCCGCTGCAGTaGCGGCTTAGATCAGTGACT +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLPWPLQ*RLRSVT
Trigger: AGTCACTGATCTAAGCCGCCACTGCAGCGGCCACGG...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGGGAGAAGGTCCCGTaGCCGCTGCAGTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQREKVP*PLQWRL
Trigger: AAGCCGCCACTGCAGCGGCCACGGGACCTTCTCCCT...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAGACATGAAGTCTTCGTaGCACTGGCACACGCCGCGC +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLDMKSS*HWHTPR
Trigger: GCGCGGCGTGTGCCAGTGCCACGAAGACTTCATGTC...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAACAGCTGCAGGCCCTGTaGGGTGACCACCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQQLQAL*GDHLGT
Trigger: TGTGCCCAGGTGGTCACCCCACAGGGCCTGCAGCTG...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCAGTGATCCACCTGGCTaGAGGGCTCCCAGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISSDPPG*RAPSSP
Trigger: TGGTGAGCTGGGAGCCCTCCAGCCAGGTGGATCACT...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTCTTAACTGTGCCATCTaGGAACTGGTAAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCLNCAI*ELVSQN
Trigger: ATTCTGACTTACCAGTTCCCAGATGGCACAGTTAAG...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGTGCAACGCAAACCTCTaGTCTTCCCGTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKCNANL*SSRPSC
Trigger: GCAGCTGGGACGGGAAGACCAGAGGTTTGCGTTGCA...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAGGGAGACAGGGTAGGTaGCGCCTTGCTCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLGRQGR*RLAQGL
Trigger: AAGGCCTTGAGCAAGGCGCCACCTACCCTGTCTCCC...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGCTGTGGAGAGGGTGGTaGATACATTTCTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLLWRGW*IHFCSG
Trigger: GCCGGAGCAGAAATGTATCCACCACCCTCTCCACAG...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGCGCCATGCAGGTAGATaGTGTACAGACCACTGGCGG +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKRHAGR*CTDHWR
Trigger: CCGCCAGTGGTCTGTACACCATCTACCTGCATGGCG...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATGTAGTCCACCTCAGTTaGGGGGTTTTCCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYVVHLS*GVFPLH
Trigger: GTGGAGTGGGAAAACCCCTCAACTGAGGTGGACTAC...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGAGCTCCTCCATCGCTTaGAGAAATCCAGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKSSSIA*RNPAAQ
Trigger: CTGGGCAGCTGGATTTCTTCAAGCGATGGAGGAGCT...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGCTGGAGTGCCGGTGGTaGGGTTGTGTAGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKLECRW*GCVACQ
Trigger: TTGACAAGCTACACAACCTCACCACCGGCACTCCAG...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGTACCACCAGCCACCATaGTGTGTCAGGGCACAGTTG +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLYHQPP*CVRAQL
Trigger: CAACTGTGCCCTGACACATCATGGTGGCTGGTGGTA...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATGCAGACCTTGGTACTTaGTGGTCGTCCCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYADLGT*WSSLVL
Trigger: GAGAACCAGGGACGACCAGCAAGTACCAAGGTCTGC...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR GCA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATCTGACAGTGACCTGTTaGTCCTTGTTGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYLTVTC*SLLLQP
Trigger: CGGCTGCAGCAACAAGGAGCAACAGGTCACTGTCAG...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGACAGTGACCTGTTaGTCCTTGTTGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLLTVTC*SLLLQP
Trigger: CGGCTGCAGCAACAAGGAGCAACAGGTCACTGTCAG...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGGTCCCGTGGCCGCTaGAGTGGCGGCTTAGATCAG +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQRSRGR*SGGLDQ
Trigger: CTGATCTAAGCCGCCACTGCAGCGGCCACGGGACCT...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTATCTTGCTCCCCTGGTTaGCCCTTTCAGCCCACACGT +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLSCSPG*PFQPTR
Trigger: ACGTGTGGGCTGAAAGGGGCAACCAGGGGAGCAAGA...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGGACCACTGGCGGCATTaGTGTTCTGCTGAACCTGAC +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKDHWRH*CSAEPD
Trigger: GTCAGGTTCAGCAGAACAGCAATGCCGCCAGTGGTC...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGTTGAAGAAATCCAGCTaGCCAGTGTTCCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLLKKSS*PVFRLW
Trigger: CCAGAGGCGGAACACTGGGCAGCTGGATTTCTTCAA...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAACCAGGACAGGCTCCCTaGTGTAGCCATGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQPGQAP*CSHEGG
Trigger: TCCGCCCTCATGGCTACAGCAGGGAGCCTGTCCTGG...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAGTCTCCTGCGAGGACTaGTCACACGGGCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLVSCED*SHGPSE
Trigger: TTCTGATGGCCCGTGTGAGCAGTCCTCGCAGGAGAC...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAACCCTCCAGGATGCCTaGGAGGCTGCTGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKTLQDA*EAAGCL
Trigger: GAGGCACCCAGCAGCCTCCCAGGCATCCTGGAGGGT...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGCTCGCAGTCCTTCTGTaGCGTCTGAAGGCGGATGTT +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKLAVLL*RLKADV
Trigger: AACATCCGCCTTCAGACGCCACAGAAGGACTGCGAG...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTCGCAGTCCTTCTGTaGCGTCTGAAGGCGGATGTT +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLLAVLL*RLKADV
Trigger: AACATCCGCCTTCAGACGCCACAGAAGGACTGCGAG...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAACGGGCCAGGAGGTCCTaGACACTGCCTGCCAACTCG +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKRARRS*TLPANS
Trigger: CGAGTTGGCAGGCAGTGTCCAGGACCTCCTGGCCCG...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAAGTCTTCGTGGCACTaGCACACGCCGCGCACGCAC +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQKSSWH*HTPRTH
Trigger: GTGCGTGCGCGGCGTGTGCCAGTGCCACGAAGACTT...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGTGCTCCTTGGGCACTTaGATCTGCTTCCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLCSLGT*ICFPES
Trigger: GCTCTCTGGGAAGCAGATCCAAGTGCCCAAGGAGCA...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCAGCAAGGTCTGTGGTaGCAAGTAGATGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLQQGLW*QVDAVG
Trigger: GCCCACAGCATCTACTTGCCACCACAGACCTTGCTG...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGGCACAGCAAGGTCTGTaGTGGCAAGTAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLAQQGL*WQVDAV
Trigger: CACAGCATCTACTTGCCACCACAGACCTTGCTGTGC...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGTGTCATATCGGCTCTTaGGGTCACTGCTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLCHIGS*GHCSWA
Trigger: TGCCCAAGAGCAGTGACCCCAAGAGCCGATATGACA...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAGCTTTCTTGCTCCCCTaGTTGCCCCTTTCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLAFLLP*LPLSAH
Trigger: GTGGGCTGAAAGGGGCAACCAGGGGAGCAAGAAAGC...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATCTGTGGAGAGGGTGGTaGATACATTTCTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYLWRGW*IHFCSG
Trigger: GCCGGAGCAGAAATGTATCCACCACCCTCTCCACAG...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGTGGTGTACAGACCACTaGCGGCATTGCTGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLWCTDH*RHCCSA
Trigger: AGCAGAACAGCAATGCCGCCAGTGGTCTGTACACCA...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GTTGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAACCTGCAGGGGCCGGCTaGCATCGCCATGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: VAEESLGGTNYQDSQIIQPAGAG*HRHAGR
Trigger: TCTACCTGCATGGCGATGCCAGCCGGCCCCTGCAGG...TTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGCCAGTGTTCCGCCTCTaGAAGACAATCCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKPVFRL*KTIQPP
Trigger: AGGTGGCTGGATTGTCTTCCAGAGGCGGAACACTGG...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGAAGCCCCATCGTCACTaGGGGGCTGAGGGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: CRRVFGRNQLSRQSNYSKKPHRH*GAEGQR
Trigger: ACGCTGACCCTCAGCCCCTCAGTGACGATGGGGCTT...CTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp TGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGGGCGGCTTAGATCAGTaGCTCCCTGGCAGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: CRRVFGRNQLSRQSNYSKGGLDQ*LPGSSA
Trigger: AGCGCTGCTGCCAGGGAGTCACTGATCTAAGCCGCC...CTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTACATACTTGTCTATaGCAGCCTGCACTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLLHTCL*QPALGP
Trigger: GGGACCCAGTGCAGGCTGTCATAGACAAGTATGTAG...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAAGCTCCTCCATCGCTTaGAGAAATCCAGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLSSSIA*RNPAAQ
Trigger: CTGGGCAGCTGGATTTCTTCAAGCGATGGAGGAGCT...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCGGAAAAGAGGGAGTCTaGGGCCTGGTGGGCATGAAT +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISGKEGV*GLVGMN
Trigger: ATTCATGCCCACCAGGCCTCAGACTCCCTCTTTTCC...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAGGATGCCTGGGAGGCTaGTGGGTGCCTCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQGCLGG*WVPLPM
Trigger: CATTGGAAGAGGCACCCAGCAGCCTCCCAGGCATCC...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR GCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGTCTTCCCGTCCCAGCTaGATCTCCTTAACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLSSRPS*ISLTVP
Trigger: TGGCACAGTTAAGGAGATGCAGCTGGGACGGGAAGA...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTATCTGCTGAACCTGACTaGAGTCCGAAGGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLSAEPD*SPKGVG
Trigger: TCCCACACCCTTCGGACTGCAGTCAGGTTCAGCAGA...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGTTGAAGAAATCCAGCTaGCCAGTGTTCCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLLKKSS*PVFRLW
Trigger: CCAGAGGCGGAACACTGGGCAGCTGGATTTCTTCAA...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGGCTTATACCGCTCCTTaGTGGAGGCCACTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKAYTAP*WRPLGR
Trigger: TCTTCCAAGTGGCCTCCAGCAAGGAGCGGTATAAGC...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAGAGCATCCCCTGCCGTaGCTCTGTATTTCCCAACTG +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLEHPLP*LCISQL
Trigger: CAGTTGGGAAATACAGAGGCACGGCAGGGGATGCTC...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATGCGTCCGCTTCTTTCTaGCCAGGACAGGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHASASF*PGQAPC
Trigger: GCAGGGAGCCTGTCCTGGGCAGAAAGAAGCGGACGC...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTGCTGGTGGTGTCTCCTaGGAGGACTGCTCACACGGG +
Preference number: 4 (lower is better)
Translates to: AEESLGGTNYQDSQIIQSAGGVS*EDCSHG
Trigger: CCCGTGTGAGCAGTCCTCGCAGGAGACACCACCAGC...ACTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTACTCGCAGTCCTTCTGTaGCGTCTGAAGGCGGATGTT +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLLAVLL*RLKADV
Trigger: AACATCCGCCTTCAGACGCCACAGAAGGACTGCGAG...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTGTGGGGTGACCACCTaGGCACAGTCCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CRRVFGRNQLSRQSNYSKCGVTT*AQSRPV
Trigger: CACAGGCCTGGACTGTGCCCAGGTGGTCACCCCACA...CTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAATGTGGGGTGACCACCTaGGCACAGTCCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKCGVTT*AQSRPV
Trigger: CACAGGCCTGGACTGTGCCCAGGTGGTCACCCCACA...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCAGCTGTGCTGCTCCTTaGGCACTTGGATCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISSCAAP*ALGSAS
Trigger: GGAAGCAGATCCAAGTGCCCAAGGAGCAGCACAGCT...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCCCTCCTGTCCTGTCATaGGGCCATATCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISPPVLS*GHIAAC
Trigger: ACAAGCTGCGATATGGCCCCATGACAGGACAGGAGG...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGTGTCATATCGGCTCTTaGGGTCACTGCTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLCHIGS*GHCSWA
Trigger: TGCCCAAGAGCAGTGACCCCAAGAGCCGATATGACA...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATCTGCGTTACAGCAGATaGACGAAGGTTTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYLRYSR*TKVSGR
Trigger: CCTCCCAGAAACCTTCGTCCATCTGCTGTAACGCAG...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAGGGAGACAGGGTAGGTaGCGCCTTGCTCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQGRQGR*RLAQGL
Trigger: AAGGCCTTGAGCAAGGCGCCACCTACCCTGTCTCCC...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGCAACTGGTGAAGTGCTaGGTGATTCCTTCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLQLVKC*VIPSLA
Trigger: GGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTG...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGCCTGGTGGGCATGAATaGGAGTTGCAGAAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLPGGHE*ELQKSL
Trigger: AAGACTCTTCTGCAACTCCCATTCATGCCCACCAGG...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGGGTCAGCGTCAACCTaGACCAAGGCAGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKGSAST*TKADLG
Trigger: GCCCAAGTCTGCCTTGGTTCAGGTTGACGCTGACCC...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATGGCTGTCAATTTCTGTaGGGGCATTGGTGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYGCQFL*GHWCQL
Trigger: AAGCTGACACCAATGCCCTCACAGAAATTGACAGCC...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR TCA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATTCAGGGCACAGTTGCTaGGTGCGATATCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYSGHSC*VRYHCL
Trigger: GAGACAATGATATCGCACTCAGCAACTGTGCCCTGA...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGTGGCTTGAAGCTTGGTaGCATGATTTGTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKWLEAW*HDLFCG
Trigger: CCCGCAGAACAAATCATGTCACCAAGCTTCAAGCCA...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGGTGGTGGCAAGTAGATaGTGTGGGCTGCTAGAAACT +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLVVASR*CGLLET
Trigger: AGTTTCTAGCAGCCCACAGCATCTACTTGCCACCAC...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGCTGCTCTCATCCTTGTaGACTGCCATTTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKLLSSL*TAISLV
Trigger: CACCAAGGAAATGGCAGTGCACAAGGATGAGAGCAG...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCTGGTGTCAGCTTTCTTaGTCCCCTGGTTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISWCQLS*SPGCPF
Trigger: AAAGGGGCAACCAGGGGAGCAAGAAAGCTGACACCA...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTATCTTCCCGTCCCAGCTaGATCTCCTTAACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLSSRPS*ISLTVP
Trigger: TGGCACAGTTAAGGAGATGCAGCTGGGACGGGAAGA...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCCCTTGCTCAAGGCCTTaGAACGCAAACCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISPCSRP*NANLWS
Trigger: AGACCAGAGGTTTGCGTTGCAAGGCCTTGAGCAAGG...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATATGTCACAGTACACCTaGAGGGGCCGGCTGGCATCG +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHMSQYT*RGRLAS
Trigger: CGATGCCAGCCGGCCCCTGCAGGTGTACTGTGACAT...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAATGTCACAGTACACCTaGAGGGGCCGGCTGGCATCG +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKMSQYT*RGRLAS
Trigger: CGATGCCAGCCGGCCCCTGCAGGTGTACTGTGACAT...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTTTTATTCACAACATATaGAGCTCTATGGACGCAATT +
Preference number: 4 (lower is better)
Translates to: KRPVVSALTPGSSELLLCFIHNI*SSMDAI
Trigger: AATTGCGTCCATAGAGCTGCATATGTTGTGAATAAA...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGCGGAACATCTCCTaGAGACTCATCCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLKRNIS*RLILGK
Trigger: CTTTCCAAGGATGAGTCTCCAGGAGATGTTCCGCTT...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000622870.4
CDS-3UTR CCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGGAACCAAGGCAGACTTaGGCACATCGATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKEPRQT*AHRSCR
Trigger: CCTACAAGATCGATGTGCCCAAGTCTGCCTTGGTTC...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GTTGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAACCGTGGCCGCTGCAGTaGCGGCTTAGATCAGTGACT +
Preference number: 4 (lower is better)
Translates to: VAEESLGGTNYQDSQIIQPWPLQ*RLRSVT
Trigger: AGTCACTGATCTAAGCCGCCACTGCAGCGGCCACGG...TTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGACATGAAGTCTTCGTaGCACTGGCACACGCCGCGC +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKDMKSS*HWHTPR
Trigger: GCGCGGCGTGTGCCAGTGCCACGAAGACTTCATGTC...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAACTTGTATGCCTCTCCTaGCTTCAGGCCCGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQLVCLS*LQARQD
Trigger: GTCCTGACGGGCCTGAAGCCAGGAGAGGCATACAAG...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAACGCCATGCAGGTAGATaGTGTACAGACCACTGGCGG +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQRHAGR*CTDHWR
Trigger: CCGCCAGTGGTCTGTACACCATCTACCTGCATGGCG...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATCCAAGCTGCCACAGCTaGTGGTGTCTCCTGCGAGGA +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHPSCHS*WCLLRG
Trigger: TCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGG...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGCCAGGGGGTAGTAGCTaGGGAGGTAGTGATCCACCT +
Preference number: 4 (lower is better)
Translates to: CRRVFGRNQLSRQSNYSKPGGSS*GGSDPP
Trigger: AGGTGGATCACTACCTCCTCAGCTACTACCCCCTGG...CTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAGGAAAAGAGGGAGTCTaGGGCCTGGTGGGCATGAAT +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQGKEGV*GLVGMN
Trigger: ATTCATGCCCACCAGGCCTCAGACTCCCTCTTTTCC...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp TTACTTCATTGGTCACTGATTTTGCTACAGAAAACCCTCCAAAGTGATAGAAAAGAGCCGGTCTCCTCCTaGCGCAGACCTTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LLHWSLILLQKTLQSDRKEPVSS*RRPWYL
Trigger: CAAGTACCAAGGTCTGCGGCAGGAGGAGACCGGCTC...TTTTCTATCACTTTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATGAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR GCA 90 bp TTACTTCATTGGTCACTGATTTTGCTACAGAAAACCCTCCAAAGTGATAGAAAACCTGTTGCTCCTTGTTaGTGCAGCCGGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLHWSLILLQKTLQSDRKPVAPC*CSREAP
Trigger: TGGAGCCTCCCGGCTGCAGCAACAAGGAGCAACAGG...TTTTCTATCACTTTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATGAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR GCA 90 bp GTTGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAGTCCTGGACACTGCCTaGCAACTCGCAGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VAEESLGGTNYQDSQIIQVLDTA*QLAVLL
Trigger: CAGAAGGACTGCGAGTTGGCAGGCAGTGTCCAGGAC...TTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAGTGGTGGCAAGTAGATaGTGTGGGCTGCTAGAAACT +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLVVASR*CGLLET
Trigger: AGTTTCTAGCAGCCCACAGCATCTACTTGCCACCAC...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAACTGTCACCCAGGCAGTaGCAAGCACAGCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKLSPRQ*QAQQGL
Trigger: CAGACCTTGCTGTGCTTGGCACTGCCTGGGTGACAG...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTTCTTGCTCCCCTGGTTaGCCCTTTCAGCCCACACGT +
Preference number: 4 (lower is better)
Translates to: AEESLGGTNYQDSQIIQSSCSPG*PFQPTR
Trigger: ACGTGTGGGCTGAAAGGGGCAACCAGGGGAGCAAGA...ACTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGGGCACAGTTGCTGAGTaGGATATCATTGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLGTVAE*DIIVSV
Trigger: GACAGAGACAATGATATCGCACTCAGCAACTGTGCC...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGTTCCAACTGGTGAAGTaGTGGGTGATTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLFQLVK*WVIPSL
Trigger: AAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAA...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATTCCTGCCGCAGACCTTaGTACTTGCTGGTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHSCRRP*YLLVVP
Trigger: AGGGACGACCAGCAAGTACCAAGGTCTGCGGCAGGA...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAAGATCAGTGACTCCCTaGCAGCAGCGCTGGGCACTA +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKRSVTP*QQRWAL
Trigger: TAGTGCCCAGCGCTGCTGCCAGGGAGTCACTGATCT...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TTACTTCATTGGTCACTGATTTTGCTACAGAAAACCCTCCAAAGTGATAGAAAACACCTCATACCGCGCTaGAGTGCCGGTGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LLHWSLILLQKTLQSDRKHLIPR*SAGGEV
Trigger: AACCTCACCACCGGCACTCCAGCGCGGTATGAGGTG...TTTTCTATCACTTTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATGAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCCAACTGGTGAAGTGCTaGGTGATTCCTTCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISQLVKC*VIPSLA
Trigger: GGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTG...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
3UTR CAA 72 bp AAGAGGGCACTTAAAAATAGCAGTAAGGCGGCAGCTTaGGTCTCCAGCATGCTGGATACAAGTCAGAACTTA +
Preference number: 4 (lower is better)
Translates to: KRALKNSSKAAA*VSSMLDTSQNL
Trigger: TAAGTTCTGACTTGTATCCAGCATGCTGGAGACCAAAGCTGCCGCCTTACTGCTATTTTTAAGTGCCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATTCATGGGCACCACCGTaGTCTTATACTCAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHSWAPP*SYTQSP
Trigger: CGGGGACTGAGTATAAGATCACGGTGGTGCCCATGA...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAATCATGGGCACCACCGTaGTCTTATACTCAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKSWAPP*SYTQSP
Trigger: CGGGGACTGAGTATAAGATCACGGTGGTGCCCATGA...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTACAGTCACTCGATCAGTaGCAACATTGGTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLQSLDQ*QHWLDC
Trigger: ACAGTCCAACCAATGTTGTCACTGATCGAGTGACTG...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTATTGCTGAAGATAAGCTaGGAAACCTTGCCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLLLKIS*ETLPFQ
Trigger: CTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAA...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATCACGTAGACCTTGTATaGCTCTCCTGGCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHHVDLV*LSWLQA
Trigger: GGCCTGAAGCCAGGAGAGGCATACAAGGTCTACGTG...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAATCTTCCCGTCCCAGCTaGATCTCCTTAACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQSSRPS*ISLTVP
Trigger: TGGCACAGTTAAGGAGATGCAGCTGGGACGGGAAGA...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAATCTGCTGAACCTGACTaGAGTCCGAAGGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKSAEPD*SPKGVG
Trigger: TCCCACACCCTTCGGACTGCAGTCAGGTTCAGCAGA...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAGCTTATACCGCTCCTTaGTGGAGGCCACTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQAYTAP*WRPLGR
Trigger: TCTTCCAAGTGGCCTCCAGCAAGGAGCGGTATAAGC...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGAGCATCCCCTGCCGTaGCTCTGTATTTCCCAACTG +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKEHPLP*LCISQL
Trigger: CAGTTGGGAAATACAGAGGCACGGCAGGGGATGCTC...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAGGCACAGTTGCTGAGTaGGATATCATTGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLGTVAE*DIIVSV
Trigger: GACAGAGACAATGATATCGCACTCAGCAACTGTGCC...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp TTACTTCATTGGTCACTGATTTTGCTACAGAAAACCCTCCAAAGTGATAGAAAAAGATCAGTGACTCCCTaGCAGCAGCGCTGGGCACTA +
Preference number: 4 (lower is better)
Translates to: LLHWSLILLQKTLQSDRKRSVTP*QQRWAL
Trigger: TAGTGCCCAGCGCTGCTGCCAGGGAGTCACTGATCT...TTTTCTATCACTTTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATGAAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAGCTGTGCTGCTCCTTaGGCACTTGGATCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHSCAAP*ALGSAS
Trigger: GGAAGCAGATCCAAGTGCCCAAGGAGCAGCACAGCT...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATCCTCCTGTCCTGTCATaGGGCCATATCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHPPVLS*GHIAAC
Trigger: ACAAGCTGCGATATGGCCCCATGACAGGACAGGAGG...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAACTGTGGAGAGGGTGGTaGATACATTTCTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKLWRGW*IHFCSG
Trigger: GCCGGAGCAGAAATGTATCCACCACCCTCTCCACAG...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAACCAGTGTTCCGCCTCTaGAAGACAATCCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKPVFRL*KTIQPP
Trigger: AGGTGGCTGGATTGTCTTCCAGAGGCGGAACACTGG...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATGCCAGAACTCCTTCATaGGGTCCCCAAAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHARTPS*GPQSLP
Trigger: TGGAAGGCTTTGGGGACCCCATGAAGGAGTTCTGGC...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCTATACCGCTCCTTGCTaGAGGCCACTTGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISYTAPC*RPLGRN
Trigger: ATTTCTTCCAAGTGGCCTCCAGCAAGGAGCGGTATA...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATCCCCCTCACTGTGCTTaGTCTCCCCATATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHPPHCA*SPHICH
Trigger: ATGGCAGATATGGGGAGACCAAGCACAGTGAGGGGG...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp GCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTCTACATACTTGTCTATaGCAGCCTGCACTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AEESLGGTNYQDSQIIQSLHTCL*QPALGP
Trigger: GGGACCCAGTGCAGGCTGTCATAGACAAGTATGTAG...ACTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAGGCTGTCAATTTCTGTaGGGGCATTGGTGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQGCQFL*GHWCQL
Trigger: AAGCTGACACCAATGCCCTCACAGAAATTGACAGCC...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000622870.4
CDS-3UTR TCA 90 bp TGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGCAATGGGAAAGGAGGTaGCAAACGTCCGGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: CRRVFGRNQLSRQSNYSKQWERR*QTSGCL
Trigger: GAGACAACCGGACGTTTGTCACCTCCTTTCCCATTG...CTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATGGCTGTCAATGTCTGTaGGGGCATTGGTGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHGCQCL*GHWCQL
Trigger: AAGCTGACACCAATGCCCTCACAGACATTGACAGCC...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621086.1
CDS-3UTR GCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAATTGGGCACTTGGATCTaGTTCCCAGAGAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKLGTWI*FPESSF
Trigger: GAAGGAGCTCTCTGGGAAGCAGATCCAAGTGCCCAA...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAATTGAAGAAATCCAGCTaGCCAGTGTTCCGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKLKKSS*PVFRLW
Trigger: CCAGAGGCGGAACACTGGGCAGCTGGATTTCTTCAA...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATGCTTATACCGCTCCTTaGTGGAGGCCACTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHAYTAP*WRPLGR
Trigger: TCTTCCAAGTGGCCTCCAGCAAGGAGCGGTATAAGC...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAGAACCAAGGCAGACTTaGGCACATCGATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQEPRQT*AHRSCR
Trigger: CCTACAAGATCGATGTGCCCAAGTCTGCCTTGGTTC...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTGCACAGCAAGGTCTGTaGTGGCAAGTAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: AEESLGGTNYQDSQIIQSAQQGL*WQVDAV
Trigger: CACAGCATCTACTTGCCACCACAGACCTTGCTGTGC...ACTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp TTACTTCATTGGTCACTGATTTTGCTACAGAAAACCCTCCAAAGTGATAGAAAACTGTCAATGTCTGTCTaGGCCTTGGTGTCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLHWSLILLQKTLQSDRKLSMSV*ALVSAF
Trigger: GAAGGCCGACACCAAGGCCCAGACAGACATTGACAG...TTTTCTATCACTTTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATGAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CCA 90 bp GTTGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAACTGCGTTACAGCAGATaGACGAAGGTTTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VAEESLGGTNYQDSQIIQLRYSR*TKVSGR
Trigger: CCTCCCAGAAACCTTCGTCCATCTGCTGTAACGCAG...TTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAACTGCGTTACAGCAGATaGACGAAGGTTTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKLRYSR*TKVSGR
Trigger: CCTCCCAGAAACCTTCGTCCATCTGCTGTAACGCAG...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTTGGTGTACAGACCACTaGCGGCATTGCTGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AEESLGGTNYQDSQIIQSWCTDH*RHCCSA
Trigger: AGCAGAACAGCAATGCCGCCAGTGGTCTGTACACCA...ACTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCATAGGCAGATTCATTaGCAGTCTGTAAATCCACTC +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLHRQIH*QSVNPL
Trigger: GAGTGGATTTACAGACTGCCAATGAATCTGCCTATG...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGTAAGGCGGCAGCTTTaGTCTCCAGCATGCTGGATA +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKVRRQL*SPACWI
Trigger: TATCCAGCATGCTGGAGACCAAAGCTGCCGCCTTAC...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR TCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAATCAGGGCACAGTTGCTaGGTGCGATATCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKSGHSC*VRYHCL
Trigger: GAGACAATGATATCGCACTCAGCAACTGTGCCCTGA...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR TCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGACGCAATTATGCAAATaGCTGAAAAGAGGGCACTTA +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLTQLCK*LKRGHL
Trigger: TAAGTGCCCTCTTTTCAGTCATTTGCATAATTGCGT...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp TTACTTCATTGGTCACTGATTTTGCTACAGAAAACCCTCCAAAGTGATAGAAAATTGGGCACTTGGATCTaGTTCCCAGAGAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLHWSLILLQKTLQSDRKLGTWI*FPESSF
Trigger: GAAGGAGCTCTCTGGGAAGCAGATCCAAGTGCCCAA...TTTTCTATCACTTTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATGAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR GCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAACTGCTCTCATCCTTGTaGACTGCCATTTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKLLSSL*TAISLV
Trigger: CACCAAGGAAATGGCAGTGCACAAGGATGAGAGCAG...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGGGTGATTCCTTCTCTTaGCCTAATCCAGTATATATG +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKGDSFS*PNPVYM
Trigger: CATATATACTGGATTAGGGCAAGAGAAGGAATCACC...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAAGAACTCCTCCTCTGTaGTTCTTTCCAGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLRTPPL*FFPEKR
Trigger: TCTTTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCT...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTGAACCAAGGCAGACTTaGGCACATCGATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: AEESLGGTNYQDSQIIQSEPRQT*AHRSCR
Trigger: CCTACAAGATCGATGTGCCCAAGTCTGCCTTGGTTC...ACTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp TTACTTCATTGGTCACTGATTTTGCTACAGAAAACCCTCCAAAGTGATAGAAAAGCACAGCAAGGTCTGTaGTGGCAAGTAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLHWSLILLQKTLQSDRKAQQGL*WQVDAV
Trigger: CACAGCATCTACTTGCCACCACAGACCTTGCTGTGC...TTTTCTATCACTTTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATGAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CCA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGAGTGACAACATTGGTTaGACTGTCAATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLSDNIG*TVNFCP
Trigger: AGGACAGAAATTGACAGTCCAACCAATGTTGTCACT...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGAGTGACAACATTGGTTaGACTGTCAATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKSDNIG*TVNFCP
Trigger: AGGACAGAAATTGACAGTCCAACCAATGTTGTCACT...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATATGGACGAAGGTTTCTaGGAGGGTCGAGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHMDEGF*EGRVLS
Trigger: AGACAGAACTCGACCCTCCCAGAAACCTTCGTCCAT...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCCTTAACTGTGCCATCTaGGAACTGGTAAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISLNCAI*ELVSQN
Trigger: ATTCTGACTTACCAGTTCCCAGATGGCACAGTTAAG...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GTTGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAACAACTGGTGAAGTGCTaGGTGATTCCTTCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: VAEESLGGTNYQDSQIIQQLVKC*VIPSLA
Trigger: GGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTG...TTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp TTACTTCATTGGTCACTGATTTTGCTACAGAAAACCCTCCAAAGTGATAGAAAAGTAAGGCGGCAGCTTTaGTCTCCAGCATGCTGGATA +
Preference number: 4 (lower is better)
Translates to: LLHWSLILLQKTLQSDRKVRRQL*SPACWI
Trigger: TATCCAGCATGCTGGAGACCAAAGCTGCCGCCTTAC...TTTTCTATCACTTTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATGAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR GCA 90 bp TGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGAATATGCCACCAGACTaGGTTACAGCAGATGGACGA +
Preference number: 4 (lower is better)
Translates to: CRRVFGRNQLSRQSNYSKNMPPD*VTADGR
Trigger: TCGTCCATCTGCTGTAACGCAGTCTGGTGGCATATT...CTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAATATGCCACCAGACTaGGTTACAGCAGATGGACGA +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHNMPPD*VTADGR
Trigger: TCGTCCATCTGCTGTAACGCAGTCTGGTGGCATATT...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGGCACAGTTGCTGAGTaGGATATCATTGTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKGTVAE*DIIVSV
Trigger: GACAGAGACAATGATATCGCACTCAGCAACTGTGCC...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp GCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTAAGCGGAACATCTCCTaGAGACTCATCCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: AEESLGGTNYQDSQIIQSKRNIS*RLILGK
Trigger: CTTTCCAAGGATGAGTCTCCAGGAGATGTTCCGCTT...ACTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAACAGTCACTAGGTTTTTaGGGCCGTCAATTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQQSLGF*GRQFLS
Trigger: AGACAGAAATTGACGGCCCCAAAAACCTAGTGACTG...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAACAGTCACTAGGTTTTTaGGGCCGTCAATTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKQSLGF*GRQFLS
Trigger: AGACAGAAATTGACGGCCCCAAAAACCTAGTGACTG...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAACTCCACGTAAGGAATaGAGAATTCATGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQTPRKE*RIHVLS
Trigger: GGAAAGGACATGAATTCTCCATTCCTTACGTGGAGT...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAACTTAACTGTGCCATCTaGGAACTGGTAAGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKLNCAI*ELVSQN
Trigger: ATTCTGACTTACCAGTTCCCAGATGGCACAGTTAAG...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATACTCCACGTAAGGAATaGAGAATTCATGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHTPRKE*RIHVLS
Trigger: GGAAAGGACATGAATTCTCCATTCCTTACGTGGAGT...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR GCA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATGGTGATTCCTTCTCTTaGCCTAATCCAGTATATATG +
Preference number: 4 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHGDSFS*PNPVYM
Trigger: CATATATACTGGATTAGGGCAAGAGAAGGAATCACC...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CCA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAATTGCAGAAGAGTCTTTaGGAGGAACCAATTATCAAG +
Preference number: 4 (lower is better)
Translates to: TYCATTILIFKTLIKTGKLQKSL*EEPIIK
Trigger: CTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAA...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CCA 90 bp GCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTTTGCAGAAGAGTCTTTaGGAGGAACCAATTATCAAG +
Preference number: 4 (lower is better)
Translates to: AEESLGGTNYQDSQIIQSLQKSL*EEPIIK
Trigger: CTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAA...ACTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR GCA 90 bp GTTGCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAATTTATTCACAACATATaGAGCTCTATGGACGCAATT +
Preference number: 4 (lower is better)
Translates to: VAEESLGGTNYQDSQIIQFIHNI*SSMDAI
Trigger: AATTGCGTCCATAGAGCTGCATATGTTGTGAATAAA...TTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
3UTR CAA 72 bp TACTGTCTTTCCTACACATACTGTGCAACTACTATTTaGATTTTCAAGACCCTCATAAAGACGGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: YCLSYTYCATTI*IFKTLIKTGKN
Trigger: ATTTTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 90 bp CTTCGTGGCACTGGCACACGCCGCGCACGCACTCGCCGTGTCCGCTaGAGTTCTCAGGGCAGGCCGGGTAGCCGCAGTCGGCACCCACGT +
Preference number: 5 (lower is better)
Translates to: LRGTGTRRARTRRVR*SSQGRPGSRSRHPR
Trigger: ACGTGGGTGCCGACTGCGGCTACCCGGCCTGCCCTGAGAACTGCAGCGGACACGGCGAGTGCGTGCGCGGCGTGTGCCAGTGCCACGAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS TCA 90 bp CGCTGCAGTCGCCGGGACAGCGCTTCTCGCTGCAGTCCTCCGACATaGAGTCTTCGTGGCACTGGCACACGCCGCGCACGCACTCGCCGT +
Preference number: 5 (lower is better)
Translates to: RCSRRDSASRCSPPT*SLRGTGTRRARTRR
Trigger: ACGGCGAGTGCGTGCGCGGCGTGTGCCAGTGCCACGAAGACTTCATGTCGGAGGACTGCAGCGAGAAGCGCTGTCCCGGCGACTGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 90 bp CCGGGACAGCGCTTCTCGCTGCAGTCCTCCGACATGAAGTCTTCGTaGCACTGGCACACGCCGCGCACGCACTCGCCGTGTCCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PGQRFSLQSSDMKSS*HWHTPRTHSPCPLQ
Trigger: CTGCAGCGGACACGGCGAGTGCGTGCGCGGCGTGTGCCAGTGCCACGAAGACTTCATGTCGGAGGACTGCAGCGAGAAGCGCTGTCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 90 bp CAGACCCTCCAGGATGCCTGGGAGGCTGCTGGGTGCCTCTTCCAATaGTGCTGCTCCTGTGAGCCGGTCTCCTCCTGCCGCAGACCTTGG +
Preference number: 5 (lower is better)
Translates to: QTLQDAWEAAGCLFQ*CCSCEPVSSCRRPW
Trigger: CCAAGGTCTGCGGCAGGAGGAGACCGGCTCACAGGAGCAGCAGCATTGGAAGAGGCACCCAGCAGCCTCCCAGGCATCCTGGAGGGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS GCA 90 bp CCACTACCCACCCCGCCCCAAGCTGCCACAGCTGGTGGTGTCTCCTaGGAGGACTGCTCACACGGGCCATCAGAACGTTCGCAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: PLPTPPQAATAGGVS*EDCSHGPSERSQPS
Trigger: GGAAGGCTGCGAACGTTCTGATGGCCCGTGTGAGCAGTCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGGGGCGGGGTGGGTAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 90 bp CCCTCTTCGCAGTGGCAGCTGCAGGTCTCCAGGGAGAAGGTCCCGTaGCCGCTGCAGTGGCGGCTTAGATCAGTGACTCCCTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PSSQWQLQVSREKVP*PLQWRLRSVTPWQQ
Trigger: CTGCTGCCAGGGAGTCACTGATCTAAGCCGCCACTGCAGCGGCCACGGGACCTTCTCCCTGGAGACCTGCAGCTGCCACTGCGAAGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 90 bp CAGACCGCAGTGACCACTACCCACCCCGCCCCAAGCTGCCACAGCTaGTGGTGTCTCCTGCGAGGACTGCTCACACGGGCCATCAGAACG +
Preference number: 5 (lower is better)
Translates to: QTAVTTTHPAPSCHS*WCLLRGLLTRAIRT
Trigger: CGTTCTGATGGCCCGTGTGAGCAGTCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 90 bp ACCCTCCAGGATGCCTGGGAGGCTGCTGGGTGCCTCTTCCAATGCTaGTGCTCCTGTGAGCCGGTCTCCTCCTGCCGCAGACCTTGGTAC +
Preference number: 5 (lower is better)
Translates to: TLQDAWEAAGCLFQC*CSCEPVSSCRRPWY
Trigger: GTACCAAGGTCTGCGGCAGGAGGAGACCGGCTCACAGGAGCAGCAGCATTGGAAGAGGCACCCAGCAGCCTCCCAGGCATCCTGGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS CCA 90 bp CAGCGCTTCTCGCTGCAGTCCTCCGACATGAAGTCTTCGTGGCACTaGCACACGCCGCGCACGCACTCGCCGTGTCCGCTGCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: QRFSLQSSDMKSSWH*HTPRTHSPCPLQFS
Trigger: TGAGAACTGCAGCGGACACGGCGAGTGCGTGCGCGGCGTGTGCCAGTGCCACGAAGACTTCATGTCGGAGGACTGCAGCGAGAAGCGCTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 90 bp ACCGCAGTGACCACTACCCACCCCGCCCCAAGCTGCCACAGCTGGTaGTGTCTCCTGCGAGGACTGCTCACACGGGCCATCAGAACGTTC +
Preference number: 5 (lower is better)
Translates to: TAVTTTHPAPSCHSW*CLLRGLLTRAIRTF
Trigger: GAACGTTCTGATGGCCCGTGTGAGCAGTCCTCGCAGGAGACACCACCAGCTGTGGCAGCTTGGGGCGGGGTGGGTAGTGGTCACTGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCATTGGGGTCACTGCTCTaGGGCACAGTGACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPLGSLL*GTVTSA
Trigger: AGCTGAGGTCACTGTGCCCAAGAGCAGTGACCCCAA...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCTTCTTGCTCCCCTGGTaGCCCCTTTCAGCCCACACG +
Preference number: 5 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAFLLPW*PLSAHT
Trigger: CGTGTGGGCTGAAAGGGGCAACCAGGGGAGCAAGAA...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAATGTCATATCGGCTCTaGGGGTCACTGCTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPMSYRL*GSLLLG
Trigger: GCCCAAGAGCAGTGACCCCAAGAGCCGATATGACAT...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 90 bp TTCCTCCAGCTTCTTCACCCGGGCCAGGAGGTCCTGGACACTGCCTaGCAACTCGCAGTCCTTCTGTGGCGTCTGAAGGCGGATGTTGTG +
Preference number: 5 (lower is better)
Translates to: FLQLLHPGQEVLDTA*QLAVLLWRLKADVV
Trigger: CACAACATCCGCCTTCAGACGCCACAGAAGGACTGCGAGTTGGCAGGCAGTGTCCAGGACCTCCTGGCCCGGGTGAAGAAGCTGGAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 90 bp GGGGCCGGCTGGCATCGCCATGCAGGTAGATGGTGTACAGACCACTaGCGGCATTGCTGTTCTGCTGAACCTGACTGCAGTCCGAAGGGT +
Preference number: 5 (lower is better)
Translates to: GAGWHRHAGRWCTDH*RHCCSAEPDCSPKG
Trigger: ACCCTTCGGACTGCAGTCAGGTTCAGCAGAACAGCAATGCCGCCAGTGGTCTGTACACCATCTACCTGCATGGCGATGCCAGCCGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCTGGAGACTCATCCTaGGAAAGACAGGGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPAPGDSS*ERQGAD
Trigger: GTCTGCTCCCTGTCTTTCCAAGGATGAGTCTCCAGG...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000622870.4
CDS-3UTR CAA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCAGCTTATACCGCTCCTaGCTGGAGGCCACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPASLYRS*LEATWK
Trigger: CTTCCAAGTGGCCTCCAGCAAGGAGCGGTATAAGCT...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 90 bp CACAGTACACCTGCAGGGGCCGGCTGGCATCGCCATGCAGGTAGATaGTGTACAGACCACTGGCGGCATTGCTGTTCTGCTGAACCTGAC +
Preference number: 5 (lower is better)
Translates to: HSTPAGAGWHRHAGR*CTDHWRHCCSAEPD
Trigger: GTCAGGTTCAGCAGAACAGCAATGCCGCCAGTGGTCTGTACACCATCTACCTGCATGGCGATGCCAGCCGGCCCCTGCAGGTGTACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCAAGGGTGACTATGTACTaGGTTCCAGGCAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPRVTMY*VPGSKP
Trigger: TGGTTTGCTGCCTGGAACCAAGTACATAGTCACCCT...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCTGCACTGCCATTTCCTaGGTGTCCCCATCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPACTAIS*VSPSAE
Trigger: TTCTGCTGATGGGGACACCAAGGAAATGGCAGTGCA...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCCATGTGTCAGGGCACAGTaGCTGAGTGCGATATCATTG +
Preference number: 5 (lower is better)
Translates to: CGLSEHSQTAVTTTHPAPCVRAQ*LSAISL
Trigger: CAATGATATCGCACTCAGCAACTGTGCCCTGACACA...TGGGGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 90 bp TGGTGTACAGACCACTGGCGGCATTGCTGTTCTGCTGAACCTGACTaGAGTCCGAAGGGTGTGGGAAACGGGCACCAACTGTGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: WCTDHWRHCCSAEPD*SPKGVGNGHQLWRG
Trigger: CCCTCTCCACAGTTGGTGCCCGTTTCCCACACCCTTCGGACTGCAGTCAGGTTCAGCAGAACAGCAATGCCGCCAGTGGTCTGTACACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 90 bp GCCATCAGAACGTTCGCAGCCTTCCTCTCAGCGTCCGCTTCTTTCTaGCCAGGACAGGCTCCCTGCTGTAGCCATGAGGGCGGATTTTCA +
Preference number: 5 (lower is better)
Translates to: AIRTFAAFLSASASF*PGQAPCCSHEGGFS
Trigger: TGAAAATCCGCCCTCATGGCTACAGCAGGGAGCCTGTCCTGGGCAGAAAGAAGCGGACGCTGAGAGGAAGGCTGCGAACGTTCTGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCCTGCTCCTTGGGCACTaGGATCTGCTTCCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCLLLGH*DLLPRE
Trigger: CTCTCTGGGAAGCAGATCCAAGTGCCCAAGGAGCAG...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS GCA 90 bp GCCTTCCTCTCAGCGTCCGCTTCTTTCTGCCCAGGACAGGCTCCCTaGTGTAGCCATGAGGGCGGATTTTCAACTCCACGTAAGGAATGG +
Preference number: 5 (lower is better)
Translates to: AFLSASASFCPGQAP*CSHEGGFSTPRKEW
Trigger: CCATTCCTTACGTGGAGTTGAAAATCCGCCCTCATGGCTACAGCAGGGAGCCTGTCCTGGGCAGAAAGAAGCGGACGCTGAGAGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 90 bp AGCACAGAGCCAAGCAGGAGCCCCATAGGGAAGCGGAACATCTCCTaGAGACTCATCCTTGGAAAGACAGGGAGCAGACCCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: STEPSRSPIGKRNIS*RLILGKTGSRPSRM
Trigger: CATCCTGGAGGGTCTGCTCCCTGTCTTTCCAAGGATGAGTCTCCAGGAGATGTTCCGCTTCCCTATGGGGCTCCTGCTTGGCTCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS CCA 90 bp GGCCAGGAGGTCCTGGACACTGCCTGCCAACTCGCAGTCCTTCTGTaGCGTCTGAAGGCGGATGTTGTGCCTGAAGATGATGTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: GQEVLDTACQLAVLL*RLKADVVPEDDVLF
Trigger: GAACAGAACATCATCTTCAGGCACAACATCCGCCTTCAGACGCCACAGAAGGACTGCGAGTTGGCAGGCAGTGTCCAGGACCTCCTGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACTTGGGGTCACTGCTCTaGGGCACAGTGACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHLGSLL*GTVTSA
Trigger: AGCTGAGGTCACTGTGCCCAAGAGCAGTGACCCCAA...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTTTCTTGCTCCCCTGGTaGCCCCTTTCAGCCCACACG +
Preference number: 5 (lower is better)
Translates to: KRPVVSALTPGSSELLLCFLLPW*PLSAHT
Trigger: CGTGTGGGCTGAAAGGGGCAACCAGGGGAGCAAGAA...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS TCA 90 bp AGGTCCTGGACACTGCCTGCCAACTCGCAGTCCTTCTGTGGCGTCTaGAGGCGGATGTTGTGCCTGAAGATGATGTTCTGTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: RSWTLPANSQSFCGV*RRMLCLKMMFCSSL
Trigger: CAGGGAGGAACAGAACATCATCTTCAGGCACAACATCCGCCTTCAGACGCCACAGAAGGACTGCGAGTTGGCAGGCAGTGTCCAGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 90 bp TGGCATCGCCATGCAGGTAGATGGTGTACAGACCACTGGCGGCATTaGTGTTCTGCTGAACCTGACTGCAGTCCGAAGGGTGTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: WHRHAGRWCTDHWRH*CSAEPDCSPKGVGN
Trigger: GTTTCCCACACCCTTCGGACTGCAGTCAGGTTCAGCAGAACAGCAATGCCGCCAGTGGTCTGTACACCATCTACCTGCATGGCGATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 90 bp TGGTTCCAGGCAGCAAACCAAGAATCTCATAGCTGTGCTGCTCCTTaGGCACTTGGATCTGCTTCCCAGAGAGCTCCTTCCCCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: WFQAANQESHSCAAP*ALGSASQRAPSPGG
Trigger: ACCCCCTGGGGAAGGAGCTCTCTGGGAAGCAGATCCAAGTGCCCAAGGAGCAGCACAGCTATGAGATTCTTGGTTTGCTGCCTGGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTACCCCCTCACTGTGCTaGGTCTCCCCATATCTGCCA +
Preference number: 5 (lower is better)
Translates to: KRPVVSALTPGSSELLLCTPSLC*VSPYLP
Trigger: TGGCAGATATGGGGAGACCAAGCACAGTGAGGGGGT...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCGGGCATGAATGGGAGTaGCAGAAGAGTCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCGHEWE*QKSLWE
Trigger: CTCCCAAAGACTCTTCTGCAACTCCCATTCATGCCC...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS TCA 90 bp CCTTCATGGGGTCCCCAAAGCCTTCCACATAGCTCCTCCATCGCTTaGAGAAATCCAGCTGCCCAGTGTTCCGCCTCTGGAAGACAATCC +
Preference number: 5 (lower is better)
Translates to: PSWGPQSLPHSSSIA*RNPAAQCSASGRQS
Trigger: GGATTGTCTTCCAGAGGCGGAACACTGGGCAGCTGGATTTCTTCAAGCGATGGAGGAGCTATGTGGAAGGCTTTGGGGACCCCATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTGCTCCTTGGGCACTaGGATCTGCTTCCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: KGGDKRPVVSALTPGSSELLLGH*DLLPRE
Trigger: CTCTCTGGGAAGCAGATCCAAGTGCCCAAGGAGCAG...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACAGTAGTCCACCTCAGTaGAGGGGTTTTCCCACTCCA +
Preference number: 5 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHSSPPQ*RGFPTP
Trigger: TGGAGTGGGAAAACCCCTCAACTGAGGTGGACTACT...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAAGCCTTGCTCAAGGCCTaGCAACGCAAACCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: KGGDKRPVVSALTPGSSEALLKA*QRKPLV
Trigger: GACCAGAGGTTTGCGTTGCAAGGCCTTGAGCAAGGC...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp AAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGTGCCGGTGGTGAGGTaGTGTAGCTTGTCAAGTCCA +
Preference number: 5 (lower is better)
Translates to: KRPVVSALTPGSSELLLCVPVVR*CSLSSP
Trigger: TGGACTTGACAAGCTACACAACCTCACCACCGGCAC...ACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAATTGGGGTCACTGCTCTaGGGCACAGTGACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKLGSLL*GTVTSA
Trigger: AGCTGAGGTCACTGTGCCCAAGAGCAGTGACCCCAA...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCATTTCTGTGAGGGCATaGGTGTCAGCTTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCISVRA*VSAFLL
Trigger: GAGCAAGAAAGCTGACACCAATGCCCTCACAGAAAT...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CAA 90 bp ACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTCAGTCACTAGGTTTTaGGGGCCGTCAATTTCTGTC +
Preference number: 5 (lower is better)
Translates to: TSGCLSPNPWVIRTPPLCSVTRF*GPSISV
Trigger: GACAGAAATTGACGGCCCCAAAAACCTAGTGACTGA...GCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACGTGAGGTTGTGTAGCTaGTCAAGTCCAAGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHVRLCS*SSPSQN
Trigger: GTTCTGGCTTGGACTTGACAAGCTACACAACCTCAC...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCCCGCCCTGAGTGCGATATCATaGTCTCTGTCAAAAGTTGTA +
Preference number: 5 (lower is better)
Translates to: FCGLSEHSQTAVTTTHPALSAIS*SLSKVV
Trigger: TACAACTTTTGACAGAGACAATGATATCGCACTCAG...GGCGGGGTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS TCA 90 bp TCTGTAAATCCACTCTCACCTCATACCGCGCTGGAGTGCCGGTGGTaGGGTTGTGTAGCTTGTCAAGTCCAAGCCAGAACTCCTTCATGG +
Preference number: 5 (lower is better)
Translates to: SVNPLSPHTALECRW*GCVACQVQARTPSW
Trigger: CCATGAAGGAGTTCTGGCTTGGACTTGACAAGCTACACAACCTCACCACCGGCACTCCAGCGCGGTATGAGGTGAGAGTGGATTTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp AGCCCTAACCCCTGGGTCATCAGAACTCCTCCTCTGTGCTTCTTTCCAGAGAAAGTGCCGGTGGTGAGGTaGTGTAGCTTGTCAAGTCCA +
Preference number: 5 (lower is better)
Translates to: SPNPWVIRTPPLCFFPEKVPVVR*CSLSSP
Trigger: TGGACTTGACAAGCTACACAACCTCACCACCGGCAC...TTTCTCTGGAAAGAAGCACAGAGGAGGAGTTCTGATGACCCAGGGGTTAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATGTGACCTGTTGCTCCTaGTTGCTGCAGCCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYVTCCS*LLQPGG
Trigger: GCCTCCCGGCTGCAGCAACAAGGAGCAACAGGTCAC...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCTTGCTGGAGGCCACTaGGAAGAAATCATATATAGC +
Preference number: 5 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHLAGGH*EEIIYS
Trigger: GCTATATATGATTTCTTCCAAGTGGCCTCCAGCAAG...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAATGTGTCAGGGCACAGTaGCTGAGTGCGATATCATTG +
Preference number: 5 (lower is better)
Translates to: KGGDKRPVVSALTPGSSECVRAQ*LSAISL
Trigger: CAATGATATCGCACTCAGCAACTGTGCCCTGACACA...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCGATCAGTGACAACATaGGTTGGACTGTCAATTTCT +
Preference number: 5 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHRSVTT*VGLSIS
Trigger: AGAAATTGACAGTCCAACCAATGTTGTCACTGATCG...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTAGAAACTTCATTCTaGACGTTACGCAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: KGGDKRPVVSALTPGSSELETSF*TLRRVT
Trigger: AGTCACCCTGCGTAACGTCAAGAATGAAGTTTCTAG...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGGCCTTGCTCAAGGCCTaGCAACGCAAACCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLALLKA*QRKPLV
Trigger: GACCAGAGGTTTGCGTTGCAAGGCCTTGAGCAAGGC...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp AAAGGAGGTGACAAACGTCCGGTTGTCTCAGCCCTAACCCCTGGGTCATCAGAACTTGCTGGAGGCCACTaGGAAGAAATCATATATAGC +
Preference number: 5 (lower is better)
Translates to: KGGDKRPVVSALTPGSSELAGGH*EEIIYS
Trigger: GCTATATATGATTTCTTCCAAGTGGCCTCCAGCAAG...TTCTGATGACCCAGGGGTTAGGGCTGAGACAACCGGACGTTTGTCACCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp GATTTGTTCTGCGGGCTATCTGAGCACTCCCAGACCGCAGTGACCACTACCCACCTGAGTGCGATATCATaGTCTCTGTCAAAAGTTGTA +
Preference number: 5 (lower is better)
Translates to: DLFCGLSEHSQTAVTTTHLSAIS*SLSKVV
Trigger: TACAACTTTTGACAGAGACAATGATATCGCACTCAG...GTGGGTAGTGGTCACTGCGGTCTGGGAGTGCTCAGATAGCCCGCAGAACAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCCGCAGACCTTGGTACTaGCTGGTCGTCCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISRRPWY*LVVPGS
Trigger: AGAACCAGGGACGACCAGCAAGTACCAAGGTCTGCG...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CAA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAACTCCTGCCGCAGACCTaGGTACTTGCTGGTCGTCCC +
Preference number: 5 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQLLPQT*VLAGRP
Trigger: GGGACGACCAGCAAGTACCAAGGTCTGCGGCAGGAG...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CAA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCGAATCCTCCGTGTTCTaGAGCAGCTGCAGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISESSVF*SSCRPC
Trigger: ACAGGGCCTGCAGCTGCTCAAGAACACGGAGGATTC...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAGAATCCTCCGTGTTCTaGAGCAGCTGCAGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLESSVF*SSCRPC
Trigger: ACAGGGCCTGCAGCTGCTCAAGAACACGGAGGATTC...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCCTGCTCCTTGGGCACTaGGATCTGCTTCCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISLLLGH*DLLPRE
Trigger: CTCTCTGGGAAGCAGATCCAAGTGCCCAAGGAGCAG...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCGCCTTGCTCAAGGCCTaGCAACGCAAACCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISALLKA*QRKPLV
Trigger: GACCAGAGGTTTGCGTTGCAAGGCCTTGAGCAAGGC...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTAACCCCCTCACTGTGCTaGGTCTCCCCATATCTGCCA +
Preference number: 5 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLTPSLC*VSPYLP
Trigger: TGGCAGATATGGGGAGACCAAGCACAGTGAGGGGGT...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCATGTCATATCGGCTCTaGGGGTCACTGCTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISMSYRL*GSLLLG
Trigger: GCCCAAGAGCAGTGACCCCAAGAGCCGATATGACAT...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCAGCTTATACCGCTCCTaGCTGGAGGCCACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISSLYRS*LEATWK
Trigger: CTTCCAAGTGGCCTCCAGCAAGGAGCGGTATAAGCT...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATAGGGTGACTATGTACTaGGTTCCAGGCAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYRVTMY*VPGSKP
Trigger: TGGTTTGCTGCCTGGAACCAAGTACATAGTCACCCT...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCAGTAGTCCACCTCAGTaGAGGGGTTTTCCCACTCCA +
Preference number: 5 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISSSPPQ*RGFPTP
Trigger: TGGAGTGGGAAAACCCCTCAACTGAGGTGGACTACT...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAATTCTTGCTCCCCTGGTaGCCCCTTTCAGCCCACACG +
Preference number: 5 (lower is better)
Translates to: TYCATTILIFKTLIKTGKFLLPW*PLSAHT
Trigger: CGTGTGGGCTGAAAGGGGCAACCAGGGGAGCAAGAA...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGTCAGTCACTAGGTTTTaGGGGCCGTCAATTTCTGTC +
Preference number: 5 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLSVTRF*GPSISV
Trigger: GACAGAAATTGACGGCCCCAAAAACCTAGTGACTGA...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGAATCCTCCGTGTTCTaGAGCAGCTGCAGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: TYCATTILIFKTLIKTGKESSVF*SSCRPC
Trigger: ACAGGGCCTGCAGCTGCTCAAGAACACGGAGGATTC...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCAGGGTGACTATGTACTaGGTTCCAGGCAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISRVTMY*VPGSKP
Trigger: TGGTTTGCTGCCTGGAACCAAGTACATAGTCACCCT...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp CTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGATAAGCGTGAGGTTGTGTAGCTaGTCAAGTCCAAGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: LGDSFSCPNPVYMLLKISVRLCS*SSPSQN
Trigger: GTTCTGGCTTGGACTTGACAAGCTACACAACCTCAC...GCTTATCTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp ACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGTATCTGCCATTAGGGTaGGCCAAGTGGCAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: TGEVLGDSFSCPNPVYMLYLPLG*AKWQFL
Trigger: TAAGAACTGCCACTTGGCCAACCCTAATGGCAGATA...CAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAATGTCATATCGGCTCTaGGGGTCACTGCTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TYCATTILIFKTLIKTGKMSYRL*GSLLLG
Trigger: GCCCAAGAGCAGTGACCCCAAGAGCCGATATGACAT...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp GGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGCGATCAGTGACAACATaGGTTGGACTGTCAATTTCT +
Preference number: 5 (lower is better)
Translates to: GEVLGDSFSCPNPVYMLLRSVTT*VGLSIS
Trigger: AGAAATTGACAGTCCAACCAATGTTGTCACTGATCG...CAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTATCAGTCACTAGGTTTTaGGGGCCGTCAATTTCTGTC +
Preference number: 5 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLSVTRF*GPSISV
Trigger: GACAGAAATTGACGGCCCCAAAAACCTAGTGACTGA...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGTGCCGGTGGTGAGGTaGTGTAGCTTGTCAAGTCCA +
Preference number: 5 (lower is better)
Translates to: TYCATTILIFKTLIKTGKVPVVR*CSLSSP
Trigger: TGGACTTGACAAGCTACACAACCTCACCACCGGCAC...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAAGCTTATACCGCTCCTaGCTGGAGGCCACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: TYCATTILIFKTLIKTGKSLYRS*LEATWK
Trigger: CTTCCAAGTGGCCTCCAGCAAGGAGCGGTATAAGCT...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TTACTTCATTGGTCACTGATTTTGCTACAGAAAACCCTCCAAAGTGATAGAAAACCTGGAGACTCATCCTaGGAAAGACAGGGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: LLHWSLILLQKTLQSDRKPGDSS*ERQGAD
Trigger: GTCTGCTCCCTGTCTTTCCAAGGATGAGTCTCCAGG...TTTTCTATCACTTTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATGAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CAA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATTGCACTGCCATTTCCTaGGTGTCCCCATCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHCTAIS*VSPSAE
Trigger: TTCTGCTGATGGGGACACCAAGGAAATGGCAGTGCA...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAATGTGTCAGGGCACAGTaGCTGAGTGCGATATCATTG +
Preference number: 5 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQCVRAQ*LSAISL
Trigger: CAATGATATCGCACTCAGCAACTGTGCCCTGACACA...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATGTTGCAGAAGAGTCTTaGGGAGGAACCAATTATCAA +
Preference number: 5 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYVAEES*GGTNYQ
Trigger: TTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAAC...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp GAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATATGTTGCTGAAGCATTGGTCACTGATTTaGCTACAGAAAACCCTCCAA +
Preference number: 5 (lower is better)
Translates to: EVLGDSFSCPNPVYMLLKHWSLI*LQKTLQ
Trigger: TTGGAGGGTTTTCTGTAGCAAAATCAGTGACCAATG...CTTCAGCAACATATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS-3UTR CAA 90 bp TATGTTGCTGAAGATAAGCTGAGAAACCTTGCCGTTCCAGTACTGTCTTTCCTACGATCAGTGACAACATaGGTTGGACTGTCAATTTCT +
Preference number: 5 (lower is better)
Translates to: YVAEDKLRNLAVPVLSFLRSVTT*VGLSIS
Trigger: AGAAATTGACAGTCCAACCAATGTTGTCACTGATCG...TAGGAAAGACAGTACTGGAACGGCAAGGTTTCTCAGCTTATCTTCAGCAACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp GCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTGTGAGGTTGTGTAGCTaGTCAAGTCCAAGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: AEESLGGTNYQDSQIIQSVRLCS*SSPSQN
Trigger: GTTCTGGCTTGGACTTGACAAGCTACACAACCTCAC...ACTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp TTTCCAACTGGTGAAGTGCTGGGTGATTCCTTCTCTTGCCCTAATCCAGTATATCTGAGTGCGATATCATaGTCTCTGTCAAAAGTTGTA +
Preference number: 5 (lower is better)
Translates to: FPTGEVLGDSFSCPNPVYLSAIS*SLSKVV
Trigger: TACAACTTTTGACAGAGACAATGATATCGCACTCAG...ATATACTGGATTAGGGCAAGAGAAGGAATCACCCAGCACTTCACCAGTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAATGTCTGTGAGGGCATaGGTGTCAGCTTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: TYCATTILIFKTLIKTGKMSVRA*VSAFLL
Trigger: GAGCAAGAAAGCTGACACCAATGCCCTCACAGACAT...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621086.1
CDS-3UTR CAA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAATTTCTGTGAGGGCATaGGTGTCAGCTTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: TYCATTILIFKTLIKTGKISVRA*VSAFLL
Trigger: GAGCAAGAAAGCTGACACCAATGCCCTCACAGAAAT...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000622870.4
CDS-3UTR CAA 90 bp CACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAACTTGCTGGAGGCCACTaGGAAGAAATCATATATAGC +
Preference number: 5 (lower is better)
Translates to: HILCNYYFDFQDPHKDGQLAGGH*EEIIYS
Trigger: GCTATATATGATTTCTTCCAAGTGGCCTCCAGCAAG...TTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAATATCTGCCATTAGGGTaGGCCAAGTGGCAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: TYCATTILIFKTLIKTGKYLPLG*AKWQFL
Trigger: TAAGAACTGCCACTTGGCCAACCCTAATGGCAGATA...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp GCAGAAGAGTCTTTGGGAGGAACCAATTATCAAGACAGTCAAATTATTCAAAGTCTAGAAACTTCATTCTaGACGTTACGCAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: AEESLGGTNYQDSQIIQSLETSF*TLRRVT
Trigger: AGTCACCCTGCGTAACGTCAAGAATGAAGTTTCTAG...ACTTTGAATAATTTGACTGTCTTGATAATTGGTTCCTCCCAAAGACTCTTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS-3UTR CAA 90 bp CTGTCTTTCCTACACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATCTAGAAACTTCATTCTaGACGTTACGCAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: LSFLHILCNYYFDFQDPHLETSF*TLRRVT
Trigger: AGTCACCCTGCGTAACGTCAAGAATGAAGTTTCTAG...ATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGTGTAGGAAAGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS-3UTR CAA 90 bp ACATACTGTGCAACTACTATTTTGATTTTCAAGACCCTCATAAAGACGGGCAAAGTTGCAGAAGAGTCTTaGGGAGGAACCAATTATCAA +
Preference number: 5 (lower is better)
Translates to: TYCATTILIFKTLIKTGKVAEES*GGTNYQ
Trigger: TTGATAATTGGTTCCTCCCAAAGACTCTTCTGCAAC...TTTGCCCGTCTTTATGAGGGTCTTGAAAATCAAAATAGTAGTTGCACAGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000621086.1
CDS GCA 72 bp ACTGGCACACGCCGCGCACGCACTCGCCGTGTCCGCTaGAGTTCTCAGGGCAGGCCGGGTAGCCGCAGTCGG +
Preference number: 6 (lower is better)
Translates to: TGTRRARTRRVR*SSQGRPGSRSR
Trigger: CCGACTGCGGCTACCCGGCCTGCCCTGAGAACTGCAGCGGACACGGCGAGTGCGTGCGCGGCGTGTGCCAGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS TCA 72 bp CGCCGGGACAGCGCTTCTCGCTGCAGTCCTCCGACATaGAGTCTTCGTGGCACTGGCACACGCCGCGCACGC +
Preference number: 6 (lower is better)
Translates to: RRDSASRCSPPT*SLRGTGTRRAR
Trigger: GCGTGCGCGGCGTGTGCCAGTGCCACGAAGACTTCATGTCGGAGGACTGCAGCGAGAAGCGCTGTCCCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 72 bp AGTAGCACTCGCCCGTGTCACAGAAGCCGTGGCCGCTaGAGTCGCCGGGACAGCGCTTCTCGCTGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: SSTRPCHRSRGR*SRRDSASRCSP
Trigger: AGGACTGCAGCGAGAAGCGCTGTCCCGGCGACTGCAGCGGCCACGGCTTCTGTGACACGGGCGAGTGCTACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp CAGGTCTCCAGGGAGAAGGTCCCGTGGCCGCTGCAGTaGCGGCTTAGATCAGTGACTCCCTGGCAGCAGCGC +
Preference number: 6 (lower is better)
Translates to: QVSREKVPWPLQ*RLRSVTPWQQR
Trigger: GCGCTGCTGCCAGGGAGTCACTGATCTAAGCCGCCACTGCAGCGGCCACGGGACCTTCTCCCTGGAGACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp TCGCTGCAGTCCTCCGACATGAAGTCTTCGTGGCACTaGCACACGCCGCGCACGCACTCGCCGTGTCCGCTG +
Preference number: 6 (lower is better)
Translates to: SLQSSDMKSSWH*HTPRTHSPCPL
Trigger: CAGCGGACACGGCGAGTGCGTGCGCGGCGTGTGCCAGTGCCACGAAGACTTCATGTCGGAGGACTGCAGCGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 72 bp GATGCCTGGGAGGCTGCTGGGTGCCTCTTCCAATGCTaGTGCTCCTGTGAGCCGGTCTCCTCCTGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: DAWEAAGCLFQC*CSCEPVSSCRR
Trigger: TCTGCGGCAGGAGGAGACCGGCTCACAGGAGCAGCAGCATTGGAAGAGGCACCCAGCAGCCTCCCAGGCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS CCA 72 bp CAGTGGCAGCTGCAGGTCTCCAGGGAGAAGGTCCCGTaGCCGCTGCAGTGGCGGCTTAGATCAGTGACTCCC +
Preference number: 6 (lower is better)
Translates to: QWQLQVSREKVP*PLQWRLRSVTP
Trigger: GGGAGTCACTGATCTAAGCCGCCACTGCAGCGGCCACGGGACCTTCTCCCTGGAGACCTGCAGCTGCCACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp CGCTTCTCGCTGCAGTCCTCCGACATGAAGTCTTCGTaGCACTGGCACACGCCGCGCACGCACTCGCCGTGT +
Preference number: 6 (lower is better)
Translates to: RFSLQSSDMKSS*HWHTPRTHSPC
Trigger: ACACGGCGAGTGCGTGCGCGGCGTGTGCCAGTGCCACGAAGACTTCATGTCGGAGGACTGCAGCGAGAAGCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 90 bp TGGCTGGAGGGCTCCCAGCTCACCAGCAGAGAATCCTCCGTGTTCTaGAGCAGCTGCAGGCCCTGTGGGGTGACCACCTGGGCACAGTCC +
Preference number: 6 (lower is better)
Translates to: WLEGSQLTSRESSVF*SSCRPCGVTTWAQS
Trigger: GGACTGTGCCCAGGTGGTCACCCCACAGGGCCTGCAGCTGCTCAAGAACACGGAGGATTCTCTGCTGGTGAGCTGGGAGCCCTCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 72 bp GGCTCCCAGCTCACCAGCAGAGAATCCTCCGTGTTCTaGAGCAGCTGCAGGCCCTGTGGGGTGACCACCTGG +
Preference number: 6 (lower is better)
Translates to: GSQLTSRESSVF*SSCRPCGVTTW
Trigger: CCAGGTGGTCACCCCACAGGGCCTGCAGCTGCTCAAGAACACGGAGGATTCTCTGCTGGTGAGCTGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 72 bp ACGTTCGCAGCCTTCCTCTCAGCGTCCGCTTCTTTCTaGCCAGGACAGGCTCCCTGCTGTAGCCATGAGGGC +
Preference number: 6 (lower is better)
Translates to: TFAAFLSASASF*PGQAPCCSHEG
Trigger: GCCCTCATGGCTACAGCAGGGAGCCTGTCCTGGGCAGAAAGAAGCGGACGCTGAGAGGAAGGCTGCGAACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp TCTTCCTCCAGCTTCTTCACCCGGGCCAGGAGGTCCTaGACACTGCCTGCCAACTCGCAGTCCTTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: SSSSFFTRARRS*TLPANSQSFCG
Trigger: GCCACAGAAGGACTGCGAGTTGGCAGGCAGTGTCCAGGACCTCCTGGCCCGGGTGAAGAAGCTGGAGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp CCTGCAGGGGCCGGCTGGCATCGCCATGCAGGTAGATaGTGTACAGACCACTGGCGGCATTGCTGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: PAGAGWHRHAGR*CTDHWRHCCSA
Trigger: AGCAGAACAGCAATGCCGCCAGTGGTCTGTACACCATCTACCTGCATGGCGATGCCAGCCGGCCCCTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 72 bp TTCCAATGCTGCTGCTCCTGTGAGCCGGTCTCCTCCTaGCGCAGACCTTGGTACTTGCTGGTCGTCCCTGGT +
Preference number: 6 (lower is better)
Translates to: FQCCCSCEPVSS*RRPWYLLVVPG
Trigger: ACCAGGGACGACCAGCAAGTACCAAGGTCTGCGGCAGGAGGAGACCGGCTCACAGGAGCAGCAGCATTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239462.9
CDS CAA 90 bp AGACTTGGGCACATCGATCTTGTAGGTGTGGCTGACAGTGACCTGTaGCTCCTTGTTGCTGCAGCCGGGAGGCTCCAGAGTGGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: RLGHIDLVGVADSDL*LLVAAAGRLQSGWG
Trigger: GCCCCAGCCACTCTGGAGCCTCCCGGCTGCAGCAACAAGGAGCAACAGGTCACTGTCAGCCACACCTACAAGATCGATGTGCCCAAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 72 bp GACCACTGGCGGCATTGCTGTTCTGCTGAACCTGACTaGAGTCCGAAGGGTGTGGGAAACGGGCACCAACTG +
Preference number: 6 (lower is better)
Translates to: DHWRHCCSAEPD*SPKGVGNGHQL
Trigger: CAGTTGGTGCCCGTTTCCCACACCCTTCGGACTGCAGTCAGGTTCAGCAGAACAGCAATGCCGCCAGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp GCTGTTCTGCTGAACCTGACTGCAGTCCGAAGGGTGTaGGAAACGGGCACCAACTGTGGAGAGGGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: AVLLNLTAVRRV*ETGTNCGEGGG
Trigger: TCCACCACCCTCTCCACAGTTGGTGCCCGTTTCCCACACCCTTCGGACTGCAGTCAGGTTCAGCAGAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 72 bp GTCCCCGGGTGCAGACCAGTGATGTCATATCGGCTCTaGGGGTCACTGCTCTTGGGCACAGTGACCTCAGCT +
Preference number: 6 (lower is better)
Translates to: VPGCRPVMSYRL*GSLLLGTVTSA
Trigger: AGCTGAGGTCACTGTGCCCAAGAGCAGTGACCCCAAGAGCCGATATGACATCACTGGTCTGCACCCGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 90 bp GGGTGCAGACCAGTGATGTCATATCGGCTCTTGGGGTCACTGCTCTaGGGCACAGTGACCTCAGCTACCTCCTGTCCTGTCATGGGGCCA +
Preference number: 6 (lower is better)
Translates to: GCRPVMSYRLLGSLL*GTVTSATSCPVMGP
Trigger: TGGCCCCATGACAGGACAGGAGGTAGCTGAGGTCACTGTGCCCAAGAGCAGTGACCCCAAGAGCCGATATGACATCACTGGTCTGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 90 bp AAAGGCAACAAGGGAGACAGGGTAGGTGGCGCCTTGCTCAAGGCCTaGCAACGCAAACCTCTGGTCTTCCCGTCCCAGCTGCATCTCCTT +
Preference number: 6 (lower is better)
Translates to: KGNKGDRVGGALLKA*QRKPLVFPSQLHLL
Trigger: AAGGAGATGCAGCTGGGACGGGAAGACCAGAGGTTTGCGTTGCAAGGCCTTGAGCAAGGCGCCACCTACCCTGTCTCCCTTGTTGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS TCA 72 bp CATATCGGCTCTTGGGGTCACTGCTCTTGGGCACAGTaGCCTCAGCTACCTCCTGTCCTGTCATGGGGCCAT +
Preference number: 6 (lower is better)
Translates to: HIGSWGHCSWAQ*PQLPPVLSWGH
Trigger: ATGGCCCCATGACAGGACAGGAGGTAGCTGAGGTCACTGTGCCCAAGAGCAGTGACCCCAAGAGCCGATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 72 bp TCAGCGTCCGCTTCTTTCTGCCCAGGACAGGCTCCCTaGTGTAGCCATGAGGGCGGATTTTCAACTCCACGT +
Preference number: 6 (lower is better)
Translates to: SASASFCPGQAP*CSHEGGFSTPR
Trigger: ACGTGGAGTTGAAAATCCGCCCTCATGGCTACAGCAGGGAGCCTGTCCTGGGCAGAAAGAAGCGGACGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp CCAAGCAGGAGCCCCATAGGGAAGCGGAACATCTCCTaGAGACTCATCCTTGGAAAGACAGGGAGCAGACCC +
Preference number: 6 (lower is better)
Translates to: PSRSPIGKRNIS*RLILGKTGSRP
Trigger: GGGTCTGCTCCCTGTCTTTCCAAGGATGAGTCTCCAGGAGATGTTCCGCTTCCCTATGGGGCTCCTGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239462.9
ENST00000622870.4
CDS CCA 72 bp GTGGCGCCTTGCTCAAGGCCTTGCAACGCAAACCTCTaGTCTTCCCGTCCCAGCTGCATCTCCTTAACTGTG +
Preference number: 6 (lower is better)
Translates to: VAPCSRPCNANL*SSRPSCISLTV
Trigger: CACAGTTAAGGAGATGCAGCTGGGACGGGAAGACCAGAGGTTTGCGTTGCAAGGCCTTGAGCAAGGCGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS TCA 72 bp GGTCCCCAAAGCCTTCCACATAGCTCCTCCATCGCTTaGAGAAATCCAGCTGCCCAGTGTTCCGCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: GPQSLPHSSSIA*RNPAAQCSASG
Trigger: TCCAGAGGCGGAACACTGGGCAGCTGGATTTCTTCAAGCGATGGAGGAGCTATGTGGAAGGCTTTGGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS TCA 72 bp CCACTCTCACCTCATACCGCGCTGGAGTGCCGGTGGTaGGGTTGTGTAGCTTGTCAAGTCCAAGCCAGAACT +
Preference number: 6 (lower is better)
Translates to: PLSPHTALECRW*GCVACQVQART
Trigger: AGTTCTGGCTTGGACTTGACAAGCTACACAACCTCACCACCGGCACTCCAGCGCGGTATGAGGTGAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp GTCCTGGACACTGCCTGCCAACTCGCAGTCCTTCTGTaGCGTCTGAAGGCGGATGTTGTGCCTGAAGATGAT +
Preference number: 6 (lower is better)
Translates to: VLDTACQLAVLL*RLKADVVPEDD
Trigger: ATCATCTTCAGGCACAACATCCGCCTTCAGACGCCACAGAAGGACTGCGAGTTGGCAGGCAGTGTCCAGGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp TGGCGGCTTAGATCAGTGACTCCCTGGCAGCAGCGCTaGGCACTACACTGTTCCTTCATCTCCACCATCTCT +
Preference number: 6 (lower is better)
Translates to: WRLRSVTPWQQR*ALHCSFISTIS
Trigger: AGAGATGGTGGAGATGAAGGAACAGTGTAGTGCCCAGCGCTGCTGCCAGGGAGTCACTGATCTAAGCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp CACCAGACTGCGTTACAGCAGATGGACGAAGGTTTCTaGGAGGGTCGAGTTCTGTCTGGGCCTTGGTGTCAG +
Preference number: 6 (lower is better)
Translates to: HQTALQQMDEGF*EGRVLSGPWCQ
Trigger: CTGACACCAAGGCCCAGACAGAACTCGACCCTCCCAGAAACCTTCGTCCATCTGCTGTAACGCAGTCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 72 bp ACCAAGAATCTCATAGCTGTGCTGCTCCTTGGGCACTaGGATCTGCTTCCCAGAGAGCTCCTTCCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: TKNLIAVLLLGH*DLLPRELLPQG
Trigger: CCCCTGGGGAAGGAGCTCTCTGGGAAGCAGATCCAAGTGCCCAAGGAGCAGCACAGCTATGAGATTCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 72 bp CTCACCTCATACCGCGCTGGAGTGCCGGTGGTGAGGTaGTGTAGCTTGTCAAGTCCAAGCCAGAACTCCTTC +
Preference number: 6 (lower is better)
Translates to: LTSYRAGVPVVR*CSLSSPSQNSF
Trigger: GAAGGAGTTCTGGCTTGGACTTGACAAGCTACACAACCTCACCACCGGCACTCCAGCGCGGTATGAGGTGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 90 bp AGGCAGCAAACCAAGAATCTCATAGCTGTGCTGCTCCTTGGGCACTaGGATCTGCTTCCCAGAGAGCTCCTTCCCCAGGGGGTAGTAGCT +
Preference number: 6 (lower is better)
Translates to: RQQTKNLIAVLLLGH*DLLPRELLPQGVVA
Trigger: AGCTACTACCCCCTGGGGAAGGAGCTCTCTGGGAAGCAGATCCAAGTGCCCAAGGAGCAGCACAGCTATGAGATTCTTGGTTTGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 72 bp CATGCAGGTAGATGGTGTACAGACCACTGGCGGCATTaGTGTTCTGCTGAACCTGACTGCAGTCCGAAGGGT +
Preference number: 6 (lower is better)
Translates to: HAGRWCTDHWRH*CSAEPDCSPKG
Trigger: ACCCTTCGGACTGCAGTCAGGTTCAGCAGAACAGCAATGCCGCCAGTGGTCTGTACACCATCTACCTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp TGGCATCGCCATGCAGGTAGATGGTGTACAGACCACTaGCGGCATTGCTGTTCTGCTGAACCTGACTGCAGT +
Preference number: 6 (lower is better)
Translates to: WHRHAGRWCTDH*RHCCSAEPDCS
Trigger: ACTGCAGTCAGGTTCAGCAGAACAGCAATGCCGCCAGTGGTCTGTACACCATCTACCTGCATGGCGATGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS TCA 72 bp ACACTGCCTGCCAACTCGCAGTCCTTCTGTGGCGTCTaGAGGCGGATGTTGTGCCTGAAGATGATGTTCTGT +
Preference number: 6 (lower is better)
Translates to: TLPANSQSFCGV*RRMLCLKMMFC
Trigger: ACAGAACATCATCTTCAGGCACAACATCCGCCTTCAGACGCCACAGAAGGACTGCGAGTTGGCAGGCAGTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp GCAGCAAACCAAGAATCTCATAGCTGTGCTGCTCCTTaGGCACTTGGATCTGCTTCCCAGAGAGCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: AANQESHSCAAP*ALGSASQRAPS
Trigger: GGAAGGAGCTCTCTGGGAAGCAGATCCAAGTGCCCAAGGAGCAGCACAGCTATGAGATTCTTGGTTTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp CCAGGTCAATATGCCACCAGACTGCGTTACAGCAGATaGACGAAGGTTTCTGGGAGGGTCGAGTTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PGQYATRLRYSR*TKVSGRVEFCL
Trigger: CAGACAGAACTCGACCCTCCCAGAAACCTTCGTCCATCTGCTGTAACGCAGTCTGGTGGCATATTGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 90 bp TTGGTTGGACTGTCAATTTCTGTCCTGCCATTCAGGAGGATCGGCTaGCCCTCCAGCTCTCCTCTCATGGGCACCACCGTGATCTTATAC +
Preference number: 6 (lower is better)
Translates to: LVGLSISVLPFRRIG*PSSSPLMGTTVILY
Trigger: GTATAAGATCACGGTGGTGCCCATGAGAGGAGAGCTGGAGGGCAAGCCGATCCTCCTGAATGGCAGGACAGAAATTGACAGTCCAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CCA 72 bp TGTGTAGCTTGTCAAGTCCAAGCCAGAACTCCTTCATaGGGTCCCCAAAGCCTTCCACATAGCTCCTCCATC +
Preference number: 6 (lower is better)
Translates to: CVACQVQARTPS*GPQSLPHSSSI
Trigger: GATGGAGGAGCTATGTGGAAGGCTTTGGGGACCCCATGAAGGAGTTCTGGCTTGGACTTGACAAGCTACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS GCA 72 bp GTGCCAAGCACAGCAAGGTCTGTGGTGGCAAGTAGATaGTGTGGGCTGCTAGAAACTTCATTCTTGACGTTA +
Preference number: 6 (lower is better)
Translates to: VPSTARSVVASR*CGLLETSFLTL
Trigger: TAACGTCAAGAATGAAGTTTCTAGCAGCCCACAGCATCTACTTGCCACCACAGACCTTGCTGTGCTTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 90 bp TCTGTGGTGGCAAGTAGATGCTGTGGGCTGCTAGAAACTTCATTCTaGACGTTACGCAGGGTGACTATGTACTTGGTTCCAGGCAGCAAA +
Preference number: 6 (lower is better)
Translates to: SVVASRCCGLLETSF*TLRRVTMYLVPGSK
Trigger: TTTGCTGCCTGGAACCAAGTACATAGTCACCCTGCGTAACGTCAAGAATGAAGTTTCTAGCAGCCCACAGCATCTACTTGCCACCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 72 bp GCAAGTAGATGCTGTGGGCTGCTAGAAACTTCATTCTaGACGTTACGCAGGGTGACTATGTACTTGGTTCCA +
Preference number: 6 (lower is better)
Translates to: ASRCCGLLETSF*TLRRVTMYLVP
Trigger: TGGAACCAAGTACATAGTCACCCTGCGTAACGTCAAGAATGAAGTTTCTAGCAGCCCACAGCATCTACTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4
CDS CAA 72 bp CCTCTGTATTTCCCAACTGTCAGCTTATACCGCTCCTaGCTGGAGGCCACTTGGAAGAAATCATATATAGCA +
Preference number: 6 (lower is better)
Translates to: PLYFPTVSLYRS*LEATWKKSYIA
Trigger: TGCTATATATGATTTCTTCCAAGTGGCCTCCAGCAAGGAGCGGTATAAGCTGACAGTTGGGAAATACAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239462.9
ENST00000621086.1
ENST00000622870.4