Pregenerated sensors for TNMD (Homo sapiens)
Ensembl gene IDs: ENSG00000000005Ensembl transcript IDs: ENST00000373031.5, ENST00000485971.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAGAACATGAAGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTaGCTACCAGGGGCCAGATGCCTCATAGGCAGAAATTCATTGAAT | + |
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Preference number: 1 (lower is better) Translates to: LEHEERNYLQVILES*LPGARCLIGRNSLN Trigger: ATTCAATGAATTTCTGCCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCTTCATGTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| 3UTR CCA 72 bp | GAAGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTaGCTACCAGGGGCCAGATGCCTCATAGGCAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: EERNYLQVILES*LPGARCLIGRN Trigger: ATTTCTGCCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| 3UTR GCA 72 bp | CAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATaGCTCATAGGCAGAAATTCATTGAATAGCATGCAT | + |
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Preference number: 3 (lower is better) Translates to: QVILESWLPGAR*LIGRNSLNSMH Trigger: ATGCATGCTATTCAATGAATTTCTGCCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR GCA 90 bp | TACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATAGGCACCTCCGGCCAGAAGTaGTTGCTCCCCCAAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: YLQVILESWLPGARCLIGTSGQK*LLPQNR Trigger: CCTGTTTTGGGGGAGCAAGCACTTCTGGCCGGAGGT...GCCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CCA 90 bp | TACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATAGGCGTAATTCTGGAGAGCTaGCTACCAGGGGCCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: YLQVILESWLPGARCLIGVILES*LPGARC Trigger: GCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTAC...GCCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR TCA 90 bp | TTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATAGGCTGAGAGACCACTGCTaGGGTGGAGTTGCAAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LPTSNSGELATRGQMPHRLRDHC*GGVASE Trigger: CTCACTTGCAACTCCACCTCAGCAGTGGTCTCTCAG...CCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR GCA 90 bp | GAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCTGGAGGATTCTTTaGCATGGTCTCTCAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: ERNYLQVILESWLPGARCLWRIL*HGLSAH Trigger: GTGTGCTGAGAGACCATGGCAAAGAATCCTCCAGAG...GCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR GCA 90 bp | AGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATAGGCAGAAATTCAAGTTCTTCCTCACTTaGTTGTCTGGCGTGACGGGT | + |
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Preference number: 4 (lower is better) Translates to: SNSGELATRGQMPHRQKFKFFLT*LSGVTG Trigger: ACCCGTCACGCCAGACAAGCAAGTGAGGAAGAACTT...GAATTTCTGCCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR GCA 90 bp | GAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTACCAGGGGCCAGATaGCTCATAGGCAGAAATTCA | + |
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Preference number: 4 (lower is better) Translates to: ERNYLQVILESWLPGARCLPGAR*LIGRNS Trigger: TGAATTTCTGCCTATGAGGCATCTGGCCCCTGGTAG...GCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCACTTGCTTGTCTaGCGTGACGGGTCTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: REELPTSNSGELATRGQMPHLLV*RDGSSL Trigger: TAGAGAAGACCCGTCACGCCAGACAAGCAAGTGAGG...CATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR TCA 90 bp | AGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATAGGCAGAAATTCTGCCATTTCCGCTTCTaGATATTTCAGTTCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SNSGELATRGQMPHRQKFCHFRF*IFQFWS Trigger: TGACCAGAACTGAAATATTCAGAAGCGGAAATGGCA...GAATTTCTGCCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR TCA 90 bp | GAACATGAAGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGTTCTCTACTTTCACTTaGGGGACCACCCACTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: EHEERNYLQVILESWLPGFSTFT*GTTHCS Trigger: TGAACAGTGGGTGGTCCCTCAAGTGAAAGTAGAGAA...CCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCTTCATGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR GCA 90 bp | GAAGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGAACAGTACTCTTTCCTTaGTTTGAGAGGACTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: EERNYLQVILESWLPGARTVLFP*FERTER Trigger: TCTCTCAGTCCTCTCAAAGCAAGGAAAGAGTACTGT...TCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR GCA 90 bp | TTAGAACATGAAGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCACCGGCCAGAAGTGCTTaGTCCCCCAAAACAGGACAA | + |
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Preference number: 4 (lower is better) Translates to: LEHEERNYLQVILESWLPPARSA*SPKTGQ Trigger: TTGTCCTGTTTTGGGGGAGCAAGCACTTCTGGCCGG...TGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCTTCATGTTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR GCA 90 bp | AGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGTCTTCTTCTCTCCATTaGTGTAGAAAGTGTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: REELPTSNSGELATRGQMSSSLH*CRKCAP Trigger: TGGAGCACACTTTCTACAGCAATGGAGAGAAGAAGA...CATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR GCA 90 bp | TTAGAACATGAAGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGCGGCAATAGCGGTTaGCTCGACGGCAGTAAATAC | + |
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Preference number: 4 (lower is better) Translates to: LEHEERNYLQVILESWLPGGNSG*LDGSKY Trigger: GTATTTACTGCCGTCGAGGCAACCGCTATTGCCGCC...TGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCTTCATGTTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR TCA 90 bp | AGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATAGGCAGAAATTCTCTGCATTTAGAATGTaGCAGTCTTCACAATTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SNSGELATRGQMPHRQKFSAFRM*QSSQFS Trigger: AGAGAATTGTGAAGACTGTCACATTCTAAATGCAGA...GAATTTCTGCCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR TCA 90 bp | AATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATATGGGACCCAAATCACTaGCTGTTCAAAGAAAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: NYLQVILESWLPGARCLIWDPNH*LFKESC Trigger: ACAACTTTCTTTGAACAGTCAGTGATTTGGGTCCCA...TATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR TCA 90 bp | AGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGATATTAGAGTGGGATTaGTCCAATACATGGTCACGT | + |
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Preference number: 4 (lower is better) Translates to: REELPTSNSGELATRGQMILEWD*SNTWSR Trigger: ACGTGACCATGTATTGGATCAATCCCACTCTAATAT...CATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR TCA 90 bp | TTAGAACATGAAGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCACTTGCTTGTCTGGCGTaGCGGGTCTTCTCTACTTTC | + |
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Preference number: 4 (lower is better) Translates to: LEHEERNYLQVILESWLPLACLA*RVFSTF Trigger: GAAAGTAGAGAAGACCCGTCACGCCAGACAAGCAAG...TGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCTTCATGTTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR GCA 90 bp | TTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATAGGCCGTTTTTAAAGTCGTaGACTTCCAATGTTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: LPTSNSGELATRGQMPHRPFLKS*TSNVSS Trigger: TGATGAAACATTGGAAGTGCACGACTTTAAAAACGG...CCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CCA 90 bp | GAACATGAAGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGTCTTCACAATTCTCTaGAGGATTCTTTGCCATGGT | + |
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Preference number: 4 (lower is better) Translates to: EHEERNYLQVILESWLPGVFTIL*RILCHG Trigger: ACCATGGCAAAGAATCCTCCAGAGAATTGTGAAGAC...CCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCTTCATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CCA 90 bp | AGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATAGGCAGAAATTCAGTATAGTCATTTATTaGAAGTTCTTCCTCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: SNSGELATRGQMPHRQKFSIVIY*KFFLTC Trigger: GCAAGTGAGGAAGAACTTCCAATAAATGACTATACT...GAATTTCTGCCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CCA 90 bp | TTAGAACATGAAGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGAGGATTCTTTGCCATaGTCTCTCAGCACACAGTAC | + |
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Preference number: 4 (lower is better) Translates to: LEHEERNYLQVILESWLPEDSLP*SLSTQY Trigger: GTACTGTGTGCTGAGAGACCATGGCAAAGAATCCTC...TGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCTTCATGTTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CAA 90 bp | AATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATATCCGGCCAGAAGTGCTaGCTCCCCCAAAACAGGACA | + |
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Preference number: 5 (lower is better) Translates to: NYLQVILESWLPGARCLISGQKC*LPQNRT Trigger: TGTCCTGTTTTGGGGGAGCAAGCACTTCTGGCCGGA...TATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGGAAGTTCTTCCTCACTaGCTTGTCTGGCGTGACGGG | + |
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Preference number: 5 (lower is better) Translates to: REELPTSNSGELATRGQMEVLPH*LVWRDG Trigger: CCCGTCACGCCAGACAAGCAAGTGAGGAAGAACTTC...CATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS GCA 90 bp | GGAGGATTCTTTGCCATGGTCTCTCAGCACACAGTACTCTTTCCTTaGTTTGAGAGGACTGAGAGACCACTGCTGAGGTGGAGTTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: GGFFAMVSQHTVLFP*FERTERPLLRWSCK Trigger: CTTGCAACTCCACCTCAGCAGTGGTCTCTCAGTCCTCTCAAAGCAAGGAAAGAGTACTGTGTGCTGAGAGACCATGGCAAAGAATCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS GCA 90 bp | GGTAGTAGCCTAGTAAAGGTTCACAGACGCGGCGGCAATAGCGGTTaGCTCGACGGCAGTAAATACAACAATAACCTCTCTCATCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GSSLVKVHRRGGNSG*LDGSKYNNNLSHPA Trigger: TGCTGGATGAGAGAGGTTATTGTTGTATTTACTGCCGTCGAGGCAACCGCTATTGCCGCCGCGTCTGTGAACCTTTACTAGGCTACTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CAA 90 bp | TTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATAGGTCTCTGGAGGATTCTTaGCCATGGTCTCTCAGCACA | + |
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Preference number: 5 (lower is better) Translates to: LPTSNSGELATRGQMPHRSLEDS*PWSLST Trigger: TGTGCTGAGAGACCATGGCAAAGAATCCTCCAGAGA...CCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CAA 90 bp | GAAGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATTCTTCCTCACTTGCTaGTCTGGCGTGACGGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: EERNYLQVILESWLPGARFFLTC*SGVTGL Trigger: AAGACCCGTCACGCCAGACAAGCAAGTGAGGAAGAA...TCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CAA 90 bp | AGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATAGGCAGAAATTCGATGACTCGTCCTCCTaGGTAGCAGTATGGATATGG | + |
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Preference number: 5 (lower is better) Translates to: SNSGELATRGQMPHRQKFDDSSS*VAVWIW Trigger: CCATATCCATACTGCTACCAAGGAGGACGAGTCATC...GAATTTCTGCCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS CCA 90 bp | CAGTGTGTCCCTAAAGTGAGGTGCTTTTTGGCGCTGGAGCTGATATaGGGATCCCTTCAGAGCTGGTATTTTGAATTCAAGCCAAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: QCVPKVRCFLALELI*GSLQSWYFEFKPSC Trigger: GCAGCTTGGCTTGAATTCAAAATACCAGCTCTGAAGGGATCCCCATATCAGCTCCAGCGCCAAAAAGCACCTCACTTTAGGGACACACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485971.1 |
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| CDS CCA 90 bp | TTTCAGTATAGTCATTTATTGGAAGTTCTTCCTCACTTGCTTGTCTaGCGTGACGGGTCTTCTCTACTTTCACTTGAGGGACCACCCACT | + |
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Preference number: 5 (lower is better) Translates to: FQYSHLLEVLPHLLV*RDGSSLLSLEGPPT Trigger: AGTGGGTGGTCCCTCAAGTGAAAGTAGAGAAGACCCGTCACGCCAGACAAGCAAGTGAGGAAGAACTTCCAATAAATGACTATACTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CAA 90 bp | TTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCCTCATAGGCAGTATAGTCATTTATaGGAAGTTCTTCCTCACTTG | + |
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Preference number: 5 (lower is better) Translates to: LPTSNSGELATRGQMPHRQYSHL*EVLPHL Trigger: CAAGTGAGGAAGAACTTCCAATAAATGACTATACTG...CCTATGAGGCATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCAGGGGCCAGATGCAGCAGTTTAAGCATTaGAGCTCAAACCTCCTATTA | + |
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Preference number: 5 (lower is better) Translates to: REELPTSNSGELATRGQMQQFKH*SSNLLL Trigger: TAATAGGAGGTTTGAGCTCAAATGCTTAAACTGCTG...CATCTGGCCCCTGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS GCA 90 bp | TGGTCACAGGATCAATTTCCATGTAAATCTTCTTCTTCTCTCCATTaGTGTAGAAAGTGTGCTCCATGTCATAGGCCTGGGAGAACAGAG | + |
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Preference number: 5 (lower is better) Translates to: WSQDQFPCKSSSSLH*CRKCAPCHRPGRTE Trigger: CTCTGTTCTCCCAGGCCTATGACATGGAGCACACTTTCTACAGCAATGGAGAGAAGAAGAAGATTTACATGGAAATTGATCCTGTGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485971.1 |
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| CDS-3UTR CAA 90 bp | TTAGAACATGAAGAGAGGAATTACCTACAAGTAATTCTGGAGAGCTGGCTACCACTTCTCTACTTTCACTaGAGGGACCACCCACTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LEHEERNYLQVILESWLPLLYFH*RDHPLF Trigger: GAACAGTGGGTGGTCCCTCAAGTGAAAGTAGAGAAG...TGGTAGCCAGCTCTCCAGAATTACTTGTAGGTAATTCCTCTCTTCATGTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS GCA 90 bp | TATTCCATTTTCAGTATAGTCATTTATTGGAAGTTCTTCCTCACTTaGTTGTCTGGCGTGACGGGTCTTCTCTACTTTCACTTGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: YSIFSIVIYWKFFLT*LSGVTGLLYFHLRD Trigger: GTCCCTCAAGTGAAAGTAGAGAAGACCCGTCACGCCAGACAAGCAAGTGAGGAAGAACTTCCAATAAATGACTATACTGAAAATGGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS CCA 90 bp | TGCCTCGACGGCAGTAAATACAACAATAACCTCTCTCATCCAGCATaGGATCAAATTCTATTCCATTTTCAGTATAGTCATTTATTGGAA | + |
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Preference number: 5 (lower is better) Translates to: CLDGSKYNNNLSHPA*DQILFHFQYSHLLE Trigger: TTCCAATAAATGACTATACTGAAAATGGAATAGAATTTGATCCCATGCTGGATGAGAGAGGTTATTGTTGTATTTACTGCCGTCGAGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS GCA 72 bp | CTAGTAAAGGTTCACAGACGCGGCGGCAATAGCGGTTaGCTCGACGGCAGTAAATACAACAATAACCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LVKVHRRGGNSG*LDGSKYNNNLS Trigger: AGAGAGGTTATTGTTGTATTTACTGCCGTCGAGGCAACCGCTATTGCCGCCGCGTCTGTGAACCTTTACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS CAA 72 bp | TGCTTGTCTGGCGTGACGGGTCTTCTCTACTTTCACTaGAGGGACCACCCACTGTTCATTTTGTTCAATCCC | + |
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Preference number: 6 (lower is better) Translates to: CLSGVTGLLYFH*RDHPLFILFNP Trigger: GGGATTGAACAAAATGAACAGTGGGTGGTCCCTCAAGTGAAAGTAGAGAAGACCCGTCACGCCAGACAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS CCA 72 bp | CCTAAAGTGAGGTGCTTTTTGGCGCTGGAGCTGATATaGGGATCCCTTCAGAGCTGGTATTTTGAATTCAAG | + |
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Preference number: 6 (lower is better) Translates to: PKVRCFLALELI*GSLQSWYFEFK Trigger: CTTGAATTCAAAATACCAGCTCTGAAGGGATCCCCATATCAGCTCCAGCGCCAAAAAGCACCTCACTTTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485971.1 |
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| CDS CCA 72 bp | AGTCATTTATTGGAAGTTCTTCCTCACTTGCTTGTCTaGCGTGACGGGTCTTCTCTACTTTCACTTGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SHLLEVLPHLLV*RDGSSLLSLEG Trigger: TCCCTCAAGTGAAAGTAGAGAAGACCCGTCACGCCAGACAAGCAAGTGAGGAAGAACTTCCAATAAATGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS CAA 90 bp | TCCATTTTCAGTATAGTCATTTATTGGAAGTTCTTCCTCACTTGCTaGTCTGGCGTGACGGGTCTTCTCTACTTTCACTTGAGGGACCAC | + |
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Preference number: 6 (lower is better) Translates to: SIFSIVIYWKFFLTC*SGVTGLLYFHLRDH Trigger: GTGGTCCCTCAAGTGAAAGTAGAGAAGACCCGTCACGCCAGACAAGCAAGTGAGGAAGAACTTCCAATAAATGACTATACTGAAAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS GCA 72 bp | TTCAGTATAGTCATTTATTGGAAGTTCTTCCTCACTTaGTTGTCTGGCGTGACGGGTCTTCTCTACTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: FSIVIYWKFFLT*LSGVTGLLYFH Trigger: GTGAAAGTAGAGAAGACCCGTCACGCCAGACAAGCAAGTGAGGAAGAACTTCCAATAAATGACTATACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS CAA 72 bp | AGTATAGTCATTTATTGGAAGTTCTTCCTCACTTGCTaGTCTGGCGTGACGGGTCTTCTCTACTTTCACTTG | + |
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Preference number: 6 (lower is better) Translates to: SIVIYWKFFLTC*SGVTGLLYFHL Trigger: CAAGTGAAAGTAGAGAAGACCCGTCACGCCAGACAAGCAAGTGAGGAAGAACTTCCAATAAATGACTATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS CAA 90 bp | CTATTCCATTTTCAGTATAGTCATTTATTGGAAGTTCTTCCTCACTaGCTTGTCTGGCGTGACGGGTCTTCTCTACTTTCACTTGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LFHFQYSHLLEVLPH*LVWRDGSSLLSLEG Trigger: TCCCTCAAGTGAAAGTAGAGAAGACCCGTCACGCCAGACAAGCAAGTGAGGAAGAACTTCCAATAAATGACTATACTGAAAATGGAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS TCA 72 bp | GCACTTCCAATGTTTCATCAGTGCCATTTCCGCTTCTaGATATTTCAGTTCTGGTCACAGGATCAATTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ALPMFHQCHFRF*IFQFWSQDQFP Trigger: TGGAAATTGATCCTGTGACCAGAACTGAAATATTCAGAAGCGGAAATGGCACTGATGAAACATTGGAAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373031.5 ENST00000485971.1 |
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| CDS CAA 72 bp | TTTCAGTATAGTCATTTATTGGAAGTTCTTCCTCACTaGCTTGTCTGGCGTGACGGGTCTTCTCTACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: FQYSHLLEVLPH*LVWRDGSSLLS Trigger: TGAAAGTAGAGAAGACCCGTCACGCCAGACAAGCAAGTGAGGAAGAACTTCCAATAAATGACTATACTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS CAA 72 bp | CATGCATTTATTATATGTTGCCAGCAGTTTAAGCATTaGAGCTCAAACCTCCTATTAGACCCTCCCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: HAFIICCQQFKH*SSNLLLDPPQH Trigger: ATGCTGGGGAGGGTCTAATAGGAGGTTTGAGCTCAAATGCTTAAACTGCTGGCAACATATAATAAATGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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| CDS TCA 72 bp | AGTCTTGTAACTCAGAAACTGATATTAGAGTGGGATTaGTCCAATACATGGTCACGTTATCACAAATCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLVTQKLILEWD*SNTWSRYHKSP Trigger: TGGAGATTTGTGATAACGTGACCATGTATTGGATCAATCCCACTCTAATATCAGTTTCTGAGTTACAAGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373031.5 |
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