RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNKS (Homo sapiens)

Ensembl gene IDs: ENSG00000173273

Ensembl transcript IDs: ENST00000310430.11, ENST00000517770.1, ENST00000517989.1, ENST00000518027.5, ENST00000518281.5, ENST00000518635.1, ENST00000519191.1, ENST00000519392.5, ENST00000519930.1, ENST00000520408.5, ENST00000522110.1, ENST00000644117.1, ENST00000646522.1

Found 583 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGATCTGGCCTTCACCAGCAGGCATTCACTAGGTCTTCTGCTCTaGGGCTGTTGCGGTCTGGGAAGGGGCTTCTGGCTTCATGATCTG +
Preference number: 1 (lower is better)
Translates to: SDLAFTSRHSLGLLL*GCCGLGRGFWLHDL
Trigger: CAGATCATGAAGCCAGAAGCCCCTTCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAGTGAATGCCTGCTGGTGAAGGCCAGATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517770.1
3UTR CCA 90 bp AGCCCGTGTCAACCTGCATCTCCAGTACTGTCCCGAAGACCTCTGTaGCAGGCTTGTGTTGGAAAGAGCAAGTGGCCTTCACCGGCTTTG +
Preference number: 1 (lower is better)
Translates to: SPCQPASPVLSRRPL*QACVGKSKWPSPAL
Trigger: CAAAGCCGGTGAAGGCCACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAGATGCAGGTTGACACGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CCA 90 bp CTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTaGCCTTCACCGGCTTTGACTTCTCTGAATTTAGGCGTTCCTAAG +
Preference number: 1 (lower is better)
Translates to: LSRRPLWQACVGKSK*PSPALTSLNLGVPK
Trigger: CTTAGGAACGCCTAAATTCAGAGAAGTCAAAGCCGGTGAAGGCCACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CCA 90 bp TGCATCTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTaGAAAGAGCAAGTGGCCTTCACCGGCTTTGACTTCTCTGAATTT +
Preference number: 1 (lower is better)
Translates to: CISSTVPKTSVAGLC*KEQVAFTGFDFSEF
Trigger: AAATTCAGAGAAGTCAAAGCCGGTGAAGGCCACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CCA 90 bp CCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGGTaGGGACAATGCCCAATAACCCTTCGTGCCATTGGGAGAGACACT +
Preference number: 1 (lower is better)
Translates to: PFTGIQIVHMLKRRG*GQCPITLRAIGRDT
Trigger: AGTGTCTCTCCCAATGGCACGAAGGGTTATTGGGCATTGTCCCCACCCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 90 bp CAAATACAGGGAGAAAGTTCGGGACCAGGGCACTTAATTTATGCCTaGGTCAAGTATCCAGCAGGCCAACAGCAGGTAAACTGGAACCAT +
Preference number: 1 (lower is better)
Translates to: QIQGESSGPGHLIYA*VKYPAGQQQVNWNH
Trigger: ATGGTTCCAGTTTACCTGCTGTTGGCCTGCTGGATACTTGACTCAGGCATAAATTAAGTGCCCTGGTCCCGAACTTTCTCCCTGTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR GCA 90 bp AGGTCAAATACAGGGAGAAAGTTCGGGACCAGGGCACTTAATTTATaGCTGAGTCAAGTATCCAGCAGGCCAACAGCAGGTAAACTGGAA +
Preference number: 1 (lower is better)
Translates to: RSNTGRKFGTRALNL*LSQVSSRPTAGKLE
Trigger: TTCCAGTTTACCTGCTGTTGGCCTGCTGGATACTTGACTCAGGCATAAATTAAGTGCCCTGGTCCCGAACTTTCTCCCTGTATTTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 90 bp TGCTGTCATTTGTTAACAAAGCGGCAGTGTTCTGAGCAAAGCGCATaGGGCCTAATACCCATTCCTGGTTGTGATACAAAAGCTAGGAGG +
Preference number: 1 (lower is better)
Translates to: CCHLLTKRQCSEQSA*GLIPIPGCDTKARR
Trigger: CCTCCTAGCTTTTGTATCACAACCAGGAATGGGTATTAGGCCTCATGCGCTTTGCTCAGAACACTGCCGCTTTGTTAACAAATGACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CCA 90 bp GGACAAGAAGCACCGCAAATGTCTTCCTTACACAGTACCTTCACCTaGCACACAGAGCATGAGACGTATAACACTGGCAGTTTAAATACT +
Preference number: 1 (lower is better)
Translates to: GQEAPQMSSLHSTFT*HTEHETYNTGSLNT
Trigger: AGTATTTAAACTGCCAGTGTTATACGTCTCATGCTCTGTGTGCCAGGTGAAGGTACTGTGTAAGGAAGACATTTGCGGTGCTTCTTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR GCA 90 bp GTTGCACTGCTGTTATTTTGCATCGAATCAAAACTCTGGGTTCCATaGTGTCATTTGTTAACAAAGCGGCAGTGTTCTGAGCAAAGCGCA +
Preference number: 1 (lower is better)
Translates to: VALLLFCIESKLWVP*CHLLTKRQCSEQSA
Trigger: TGCGCTTTGCTCAGAACACTGCCGCTTTGTTAACAAATGACAGCATGGAACCCAGAGTTTTGATTCGATGCAAAATAACAGCAGTGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR GCA 90 bp TCACAGATATCACACAAGAGGGATTCGGATACAATGGGGGAAAGGTaGTTGAAAATACACACCACTTCTGTTTGCAAGGCCATTTACAGG +
Preference number: 1 (lower is better)
Translates to: SQISHKRDSDTMGER*LKIHTTSVCKAIYR
Trigger: CCTGTAAATGGCCTTGCAAACAGAAGTGGTGTGTATTTTCAAGCACCTTTCCCCCATTGTATCCGAATCCCTCTTGTGTGATATCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 90 bp AGATATCACACAAGAGGGATTCGGATACAATGGGGGAAAGGTGCTTaGAAATACACACCACTTCTGTTTGCAAGGCCATTTACAGGAATC +
Preference number: 1 (lower is better)
Translates to: RYHTRGIRIQWGKGA*KYTPLLFARPFTGI
Trigger: GATTCCTGTAAATGGCCTTGCAAACAGAAGTGGTGTGTATTTTCAAGCACCTTTCCCCCATTGTATCCGAATCCCTCTTGTGTGATATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CCA 90 bp AGAATCCTGGTTGCACTGCTGTTATTTTGCATCGAATCAAAACTCTaGGTTCCATGCTGTCATTTGTTAACAAAGCGGCAGTGTTCTGAG +
Preference number: 1 (lower is better)
Translates to: RILVALLLFCIESKL*VPCCHLLTKRQCSE
Trigger: CTCAGAACACTGCCGCTTTGTTAACAAATGACAGCATGGAACCCAGAGTTTTGATTCGATGCAAAATAACAGCAGTGCAACCAGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 90 bp TCACAGCTTAATCACCTTGCATTAAACCCATCGTTTTCAGGGCTTTaGATTGCAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCT +
Preference number: 1 (lower is better)
Translates to: SQLNHLALNPSFSGL*IAMASLCHTVFPIP
Trigger: AGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTGCAATTCAAAGCCCTGAAAACGATGGGTTTAATGCAAGGTGATTAAGCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 90 bp GATGAGCTTGAAACAATGGGAGCAGAAGCAGGTGTTATATGCACATaGAGAGTTTCAGTGTTTTGTGTCACGGAGACAATGTTTACATAC +
Preference number: 1 (lower is better)
Translates to: DELETMGAEAGVICT*RVSVFCVTETMFTY
Trigger: GTATGTAAACATTGTCTCCGTGACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATTGTTTCAAGCTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CCA 90 bp TCCAGTGACCTAACAATGATTTCCTTTAAGTGTTTCTCATACCACTaGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTAAAAAT +
Preference number: 1 (lower is better)
Translates to: SSDLTMISFKCFSYH*SRPINGSQAAFAKN
Trigger: ATTTTTAGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGAGAAACACTTAAAGGAAATCATTGTTAGGTCACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522110.1
3UTR TCA 90 bp CCATATTCAGGCATTTCTCTGTATACTTCAATGCACTTTGTATTTTaGGAGCAAAGGGAAATCAGTCTAGCCACTAACATCAAGCTCAAA +
Preference number: 1 (lower is better)
Translates to: PYSGISLYTSMHFVF*EQREISLATNIKLK
Trigger: TTTGAGCTTGATGTTAGTGGCTAGACTGATTTCCCTTTGCTCTCAAAATACAAAGTGCATTGAAGTATACAGAGAAATGCCTGAATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR GCA 90 bp ACAATAGCCAATGATGCATGTCTGGCAAATCAAAAACAAGCTTGTTaGCTGTCGTATGTGTATATTTGTTATAGACACGTCATGCATAAC +
Preference number: 1 (lower is better)
Translates to: TIANDACLANQKQAC*LSYVYICYRHVMHN
Trigger: GTTATGCATGACGTGTCTATAACAAATATACACATACGACAGGCAACAAGCTTGTTTTTGATTTGCCAGACATGCATCATTGGCTATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 90 bp CAAACCAGAAATCTGGTAGCTGAGGAAGTTCCAATATGGAGAAATTaGAATGGATTAATTTTAATCAGCTCCATTGCATGTAAGGGAATA +
Preference number: 1 (lower is better)
Translates to: QTRNLVAEEVPIWRN*NGLILISSIACKGI
Trigger: TATTCCCTTACATGCAATGGAGCTGATTAAAATTAATCCATTTCAATTTCTCCATATTGGAACTTCCTCAGCTACCAGATTTCTGGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR GCA 90 bp TCCTGGTTCTTCATGGTGGGGTCTGCACCATGCGCTAGGAGGAGGGCGCACAGCCCTTCCTTTCTGGGCTaGTTCATGGAGGGGAGTAAA +
Preference number: 2 (lower is better)
Translates to: SWFFMVGSAPCARRRAHSPSFLG*FMEGSK
Trigger: TTTACTCCCCTCCATGAAGCAGCCCAGAAAGGAAGG...GCTGTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCACCATGAAGAACCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518635.1
3UTR-3UTR TCA 90 bp TTCACCAGCAGGCATTCACTAGGTCTTCTGCTCTGCGGCTGTTGCGGTCTGGGATCCCAGGTTGAAATCTaGTCTGGCCTTCACCAGCAG +
Preference number: 2 (lower is better)
Translates to: FTSRHSLGLLLCGCCGLGSQVEI*SGLHQQ
Trigger: CTGCTGGTGAAGGCCAGATCAGATTTCAACCTGGGA...TCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAGTGAATGCCTGCTGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517770.1
3UTR CAA 90 bp TCAACCTGCATCTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTaGTGTTGGAAAGAGCAAGTGGCCTTCACCGGCTTTGACTTCTCT +
Preference number: 2 (lower is better)
Translates to: STCISSTVPKTSVAG*CWKEQVAFTGFDFS
Trigger: AGAGAAGTCAAAGCCGGTGAAGGCCACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAGATGCAGGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR GCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGGGGTTGTAACCCCTaGCACTGTTGGGTCACACAG +
Preference number: 2 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRGGCNP*HCWVTQ
Trigger: CTGTGTGACCCAACAGTGGCAGGGGTTACAACCCCC...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR TCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGAAAAGCGGCAGTGTTCTaGGCAAAGCGCATGAGGCCT +
Preference number: 2 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGKAAVF*AKRMRP
Trigger: AGGCCTCATGCGCTTTGCTCAGAACACTGCCGCTTT...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR GCA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCACTAGGTCTTCTGCTCTaGGGCTGTTGCGGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSLGLLL*GCCGLG
Trigger: TCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAG...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517770.1
3UTR-3UTR CCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCATCCCCTGGATCCATTaGGGCTGCCATGATACAGAA +
Preference number: 2 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFIPWIH*GCHDTE
Trigger: TTCTGTATCATGGCAGCCCCAATGGATCCAGGGGAT...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 90 bp CTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTGGCCTTCACCGGCTTaGACTTCTCTGAATTTAGGCGTTCCTAAGTCAGGTTGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: LWQACVGKSKWPSPA*TSLNLGVPKSGWCL
Trigger: CAAACACCAACCTGACTTAGGAACGCCTAAATTCAGAGAAGTCAAAGCCGGTGAAGGCCACTTGCTCTTTCCAACACAAGCCTGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR TCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCCCCAGCTTGGGTCACTaGAACTTCAAAAGAAGCAAC +
Preference number: 2 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFPSLGH*NFKRSN
Trigger: GTTGCTTCTTTTGAAGTTTCAGTGACCCAAGCTGGG...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCGTTCCTAAGTCAGGTTaGTGTTTGTGCCCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFVPKSG*CLCPSL
Trigger: AAGAGAAGGGCACAAACACCAACCTGACTTAGGAAC...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGTTGGAAAGAGCAAGTaGCCTTCACCGGCTTTGACT +
Preference number: 2 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRVGKSK*PSPALT
Trigger: AGTCAAAGCCGGTGAAGGCCACTTGCTCTTTCCAAC...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGATTAAAAAGGCGGGGGTaGGGACAATGCCCAATAACC +
Preference number: 2 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGLKRRG*GQCPIT
Trigger: GGTTATTGGGCATTGTCCCCACCCCCGCCTTTTTAA...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR GCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCGTCAGCGTGACTTTGTaGAAAATATCCTCAAGAAGG +
Preference number: 2 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFVSVTL*KISSRR
Trigger: CCTTCTTGAGGATATTTTGCACAAAGTCACGCTGAC...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR GCA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGTGGATCCATTGGGGCTaGCATGATACAGAACCACAC +
Preference number: 2 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGWIHWG*HDTEPH
Trigger: GTGTGGTTCTGTATCATGGCAGCCCCAATGGATCCA...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR TCA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGAATCCAGTCCCAGGTTaGAATCTGATCTGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGNPVPG*NLIWPS
Trigger: TGAAGGCCAGATCAGATTTCAACCTGGGACTGGATT...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR TCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTACAAACAATAGCCAATaGTGCATGTCTGGCAAATCA +
Preference number: 2 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSTNNSQ*CMSGKS
Trigger: TGATTTGCCAGACATGCATCATTGGCTATTGTTTGT...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGAGGAGGCAGAACTCTCTaGCAATGTATAAAACTCGTC +
Preference number: 2 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGGGRTL*QCIKLV
Trigger: GACGAGTTTTATACATTGCCAGAGAGTTCTGCCTCC...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR TCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGAACACTTGACAGCTACTaGAAACTACACAGATGGCAA +
Preference number: 2 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGTLDSY*KLHRWQ
Trigger: TTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGT...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR GCA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTAAGCCCGTGTCAACCTaGATCTCCAGTACTGTCCCG +
Preference number: 2 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFKPVST*ISSTVP
Trigger: CGGGACAGTACTGGAGATGCAGGTTGACACGGGCTT...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR TCA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACTCCCAGGTTGAAATCTaGTCTGGCCTTCACCAGCAG +
Preference number: 2 (lower is better)
Translates to: SKTHLTATENYTDGNFFNSQVEI*SGLHQQ
Trigger: CTGCTGGTGAAGGCCAGATCAGATTTCAACCTGGGA...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR GCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGAATCCTGGTTGCACTaGTGTTATTTTGCATCGAAT +
Preference number: 2 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRESWLH*CYFASN
Trigger: ATTCGATGCAAAATAACAGCAGTGCAACCAGGATTC...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGAGTGGCAGGCTTGTGTTaGAAAGAGCAAGTGGCCTTC +
Preference number: 2 (lower is better)
Translates to: ASCSRIVVFECICFPYARVAGLC*KEQVAF
Trigger: GAAGGCCACTTGCTCTTTCCAACACAAGCCTGCCAC...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTTTTGGAGGCATCCCCTaGATCCATTGGGGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: YPLFESESQHSQLKKQSSFGGIP*IHWGCH
Trigger: ATGGCAGCCCCAATGGATCCAGGGGATGCCTCCAAA...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTTCTCAAAGCTTCACCTaGAATTCTAGTGCTATTAAA +
Preference number: 2 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSSQSFT*NSSAIK
Trigger: TTTAATAGCACTAGAATTCCAGGTGAAGCTTTGAGA...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 90 bp CAGATATCACACAAGAGGGATTCGGATACAATGGGGGAAAGGTGCTaGAAAATACACACCACTTCTGTTTGCAAGGCCATTTACAGGAAT +
Preference number: 2 (lower is better)
Translates to: QISHKRDSDTMGERC*KIHTTSVCKAIYRN
Trigger: ATTCCTGTAAATGGCCTTGCAAACAGAAGTGGTGTGTATTTTCAAGCACCTTTCCCCCATTGTATCCGAATCCCTCTTGTGTGATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGAACAATCTGAATTCTaGAACGTGAAAGAAACCTCT +
Preference number: 2 (lower is better)
Translates to: VEGEGKRTSISGDEMMTREQSEF*NVKETS
Trigger: AGAGGTTTCTTTCACGTTCCAGAATTCAGATTGTTC...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CCA 90 bp TGTTTCTCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTAAACCTCTTTTGGTCTaGACTGTCCTCAAAGGACAT +
Preference number: 2 (lower is better)
Translates to: CFSYHWSRPINGSQAAFAKPLLV*TVLKGH
Trigger: ATGTCCTTTGAGGACAGTCCAGACCAAAAGAGGTTT...AGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGAGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522110.1
3UTR-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCCCAGGTTGAAATCTaGTCTGGCCTTCACCAGCAG +
Preference number: 2 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASQVEI*SGLHQQ
Trigger: CTGCTGGTGAAGGCCAGATCAGATTTCAACCTGGGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
3UTR-3UTR TCA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGATGCACTTTGTATTTTaGGAGCAAAGGGAAATCAGT +
Preference number: 2 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGMHFVF*EQREIS
Trigger: ACTGATTTCCCTTTGCTCTCAAAATACAAAGTGCAT...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CCA 90 bp TGTTTCTCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTGTATTAAACCTCTTTTaGTCTGGACTGTCCTCAAAG +
Preference number: 2 (lower is better)
Translates to: CFSYHWSRPINGSQAAFAVLNLF*SGLSSK
Trigger: CTTTGAGGACAGTCCAGACCAAAAGAGGTTTAATAC...AGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGAGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522110.1
3UTR CAA 90 bp TACGTGAGACAATTAGTCCAACAGAAAACACAAGAAGAAGGCTATTaGTCACAGATATCACACAAGAGGGATTCGGATACAATGGGGGAA +
Preference number: 2 (lower is better)
Translates to: YVRQLVQQKTQEEGY*SQISHKRDSDTMGE
Trigger: TTCCCCCATTGTATCCGAATCCCTCTTGTGTGATATCTGTGACAAATAGCCTTCTTCTTGTGTTTTCTGTTGGACTAATTGTCTCACGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 90 bp TGGAGGGGAGTAAACGCCCACTTATCTGTTGCATTTACACACGTGTaGTATTTTATCAATAAAGCCGCTATGTCAACATGCTTGCATTTT +
Preference number: 2 (lower is better)
Translates to: WRGVNAHLSVAFTHV*YFINKAAMSTCLHF
Trigger: AAAATGCAAGCATGTTGACATAGCGGCTTTATTGATAAAATACAACACGTGTGTAAATGCAACAGATAAGTGGGCGTTTACTCCCCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518635.1
3UTR-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAATCCAGTCCCAGGTTaGAATCTGATCTGGCCTTCA +
Preference number: 2 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNANPVPG*NLIWPS
Trigger: TGAAGGCCAGATCAGATTTCAACCTGGGACTGGATT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
3UTR-3UTR TCA 90 bp AATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAGTTTCAGTGTTTTGTGTCAACTGAATAGGCTTTaGAATCTTTCCAGCACTTCT +
Preference number: 2 (lower is better)
Translates to: NGSRSRCYMHMKSFSVLCQLNRL*NLSSTS
Trigger: AGAAGTGCTGGAAAGATTTCAAAGCCTATTCAGTTG...ACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 90 bp GAAGACAAACAGCTTATTTCTAGGCTGTCAGGGACTTCTAGAATATaGATGTTGTTATTAGAAACAATCCTCTGTAATCCAGTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: EDKQLISRLSGTSRI*MLLLETILCNPVPG
Trigger: ACCTGGGACTGGATTACAGAGGATTGTTTCTAATAACAACATCAATATTCTAGAAGTCCCTGACAGCCTAGAAATAAGCTGTTTGTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
3UTR CAA 90 bp GTAGGTATCAAAGACAAACATTACTACTACAAAGATAAGATGAGCTaGAAACAATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAG +
Preference number: 2 (lower is better)
Translates to: VGIKDKHYYYKDKMS*KQWEQKQVLYAHEE
Trigger: CTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATTGTTTCAAGCTCATCTTATCTTTGTAGTAGTAATGTTTGTCTTTGATACCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR GCA 90 bp AATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAGTTTCAGTGTTTTGTGTCAAAAACAAGCTTGTTaGCTGTCGTATGTGTATATT +
Preference number: 2 (lower is better)
Translates to: NGSRSRCYMHMKSFSVLCQKQAC*LSYVYI
Trigger: AATATACACATACGACAGGCAACAAGCTTGTTTTTG...ACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGACCAATGATGCATGTCTaGCAAATCAAAAACAAGCTT +
Preference number: 2 (lower is better)
Translates to: ASCSRIVVFECICFPYARPMMHV*QIKNKL
Trigger: AAGCTTGTTTTTGATTTGCCAGACATGCATCATTGG...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR TCA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAAATGATTTTGTCAGCGTaGCTTTGTGCAAAATATCCT +
Preference number: 2 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKEMILSA*LCAKYP
Trigger: AGGATATTTTGCACAAAGTCACGCTGACAAAATCAT...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR GCA 72 bp GCCTTCACCAGCAGGCATTCACTAGGTCTTCTGCTCTaGGGCTGTTGCGGTCTGGGAAGGGGCTTCTGGCTT +
Preference number: 3 (lower is better)
Translates to: AFTSRHSLGLLL*GCCGLGRGFWL
Trigger: AAGCCAGAAGCCCCTTCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAGTGAATGCCTGCTGGTGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517770.1
3UTR GCA 72 bp GAGGAGGGCGCACAGCTGCGTCCTTCCTTTCTGGGCTaGTTCATGGAGGGGAGTAAACGCCCACTTATCTGT +
Preference number: 3 (lower is better)
Translates to: EEGAQLRPSFLG*FMEGSKRPLIC
Trigger: ACAGATAAGTGGGCGTTTACTCCCCTCCATGAAGCAGCCCAGAAAGGAAGGACGCAGCTGTGCGCCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518635.1
3UTR-3UTR CAA 90 bp GCACCATGCGCTAGGAGGAGGGCGCACAGCTGCGTCCTTCCTTTCTGGGCTGCTACGCCCACTTATCTGTaGCATTTACACACGTGTTGT +
Preference number: 3 (lower is better)
Translates to: APCARRRAHSCVLPFWAATPTYL*HLHTCC
Trigger: ACAACACGTGTGTAAATGCAACAGATAAGTGGGCGT...AGCAGCCCAGAAAGGAAGGACGCAGCTGTGCGCCCTCCTCCTAGCGCATGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518635.1
3UTR CCA 72 bp AGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTaGAAAGAGCAAGTGGCCTTCACCGGCTTTGACTTC +
Preference number: 3 (lower is better)
Translates to: STVPKTSVAGLC*KEQVAFTGFDF
Trigger: GAAGTCAAAGCCGGTGAAGGCCACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CAA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCATCTGCTCTGCGGCTGTaGCGGTCTGGGAAGGGGCTT +
Preference number: 3 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSSALRL*RSGKGL
Trigger: AAGCCCCTTCCCAGACCGCAACAGCCGCAGAGCAGA...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517770.1
3UTR CCA 72 bp GGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGGTaGGGACAATGCCCAATAACCCTTCGTGCCATTGGG +
Preference number: 3 (lower is better)
Translates to: GIQIVHMLKRRG*GQCPITLRAIG
Trigger: CCCAATGGCACGAAGGGTTATTGGGCATTGTCCCCACCCCCGCCTTTTTAACATGTGCACTATCTGGATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR GCA 72 bp ACAGGGAGAAAGTTCGGGACCAGGGCACTTAATTTATaGCTGAGTCAAGTATCCAGCAGGCCAACAGCAGGT +
Preference number: 3 (lower is better)
Translates to: TGRKFGTRALNL*LSQVSSRPTAG
Trigger: ACCTGCTGTTGGCCTGCTGGATACTTGACTCAGGCATAAATTAAGTGCCCTGGTCCCGAACTTTCTCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR GCA 72 bp GGGACACCCCACTACCAGGGTTCAACTGCATTTCTCTaGAAACACTCTGAATCAACACAAGGGCTTTCAGGG +
Preference number: 3 (lower is better)
Translates to: GTPHYQGSTAFL*KHSESTQGLSG
Trigger: CCCTGAAAGCCCTTGTGTTGATTCAGAGTGTTTGCAGAGAAATGCAGTTGAACCCTGGTAGTGGGGTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CCA 72 bp AGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTaGCCTTCACCGGCTTTGACTTCTCTGAATTTAGGC +
Preference number: 3 (lower is better)
Translates to: RPLWQACVGKSK*PSPALTSLNLG
Trigger: GCCTAAATTCAGAGAAGTCAAAGCCGGTGAAGGCCACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 72 bp GGAGAAAGTTCGGGACCAGGGCACTTAATTTATGCCTaGGTCAAGTATCCAGCAGGCCAACAGCAGGTAAAC +
Preference number: 3 (lower is better)
Translates to: GESSGPGHLIYA*VKYPAGQQQVN
Trigger: GTTTACCTGCTGTTGGCCTGCTGGATACTTGACTCAGGCATAAATTAAGTGCCCTGGTCCCGAACTTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 72 bp CTACCAGGGTTCAACTGCATTTCTCTGCAAACACTCTaGATCAACACAAGGGCTTTCAGGGCTGCCTGCAGA +
Preference number: 3 (lower is better)
Translates to: LPGFNCISLQTL*INTRAFRAACR
Trigger: TCTGCAGGCAGCCCTGAAAGCCCTTGTGTTGATTCAGAGTGTTTGCAGAGAAATGCAGTTGAACCCTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 72 bp TCCATGCTGTCATTTGTTAACAAAGCGGCAGTGTTCTaGGCAAAGCGCATGAGGCCTAATACCCATTCCTGG +
Preference number: 3 (lower is better)
Translates to: SMLSFVNKAAVF*AKRMRPNTHSW
Trigger: CCAGGAATGGGTATTAGGCCTCATGCGCTTTGCTCAGAACACTGCCGCTTTGTTAACAAATGACAGCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR GCA 72 bp GTGGAAACTGAATCTTGCTCAGCCAGAAGCTTGGGTTaGACTGCTAATGATTTTGTCAGCGTGACTTTGTGC +
Preference number: 3 (lower is better)
Translates to: VETESCSARSLG*TANDFVSVTLC
Trigger: GCACAAAGTCACGCTGACAAAATCATTAGCAGTGCAACCCAAGCTTCTGGCTGAGCAAGATTCAGTTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CAA 90 bp AATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAGTTTCAGTGTTTTGTGTTGTGGCAGGCTTGTGTaGGAAAGAGCAAGTGGCCTT +
Preference number: 3 (lower is better)
Translates to: NGSRSRCYMHMKSFSVLCCGRLV*ERASGL
Trigger: AAGGCCACTTGCTCTTTCCAACACAAGCCTGCCACA...ACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CAA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGGTTCCATGCTGTCATTaGTTAACAAAGCGGCAGTGT +
Preference number: 3 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGVPCCH*LTKRQC
Trigger: ACACTGCCGCTTTGTTAACAAATGACAGCATGGAAC...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CAA 90 bp AATTCACACTTTTTGAGGGAGAACTTTGTGCCAGATACTTCTCACCAAATGCTCAACCACGCCCCCACTTaGTCCCATCACAATAACCTG +
Preference number: 3 (lower is better)
Translates to: NSHFLRENFVPDTSHQMLNHAPT*SHHNNL
Trigger: CAGGTTATTGTGATGGGACAAAGTGGGGGCGTGGTT...GAGCATTTGGTGAGAAGTATCTGGCACAAAGTTCTCCCTCAAAAAGTGTGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522110.1
3UTR TCA 72 bp ACAGGTCTGAAACACATGGAGACATGGCCGACTCACTaGCACACCTTTCAAACACTAAGAAATGGGACTACA +
Preference number: 3 (lower is better)
Translates to: TGLKHMETWPTH*HTFQTLRNGTT
Trigger: TGTAGTCCCATTTCTTAGTGTTTGAAAGGTGTGTCAGTGAGTCGGCCATGTCTCCATGTGTTTCAGACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CAA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGAAAGAGTTTCAGTGTTTaGTGTCACGGAGACAATGTT +
Preference number: 3 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGKSFSV*CHGDNV
Trigger: AACATTGTCTCCGTGACACAAAACACTGAAACTCTT...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 72 bp TTGTTAACAAAGCGGCAGTGTTCTGAGCAAAGCGCATaGGGCCTAATACCCATTCCTGGTTGTGATACAAAA +
Preference number: 3 (lower is better)
Translates to: LLTKRQCSEQSA*GLIPIPGCDTK
Trigger: TTTTGTATCACAACCAGGAATGGGTATTAGGCCTCATGCGCTTTGCTCAGAACACTGCCGCTTTGTTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 72 bp ACAAGAGGGATTCGGATACAATGGGGGAAAGGTGCTTaGAAATACACACCACTTCTGTTTGCAAGGCCATTT +
Preference number: 3 (lower is better)
Translates to: TRGIRIQWGKGA*KYTPLLFARPF
Trigger: AAATGGCCTTGCAAACAGAAGTGGTGTGTATTTTCAAGCACCTTTCCCCCATTGTATCCGAATCCCTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR GCA 72 bp GGGGAAAGGTGCTTGAAAATACACACCACTTCTGTTTaGAAGGCCATTTACAGGAATCCAGATAGTGCACAT +
Preference number: 3 (lower is better)
Translates to: GERCLKIHTTSV*KAIYRNPDSAH
Trigger: ATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAACAGAAGTGGTGTGTATTTTCAAGCACCTTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CAA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTACCTCTGTGGCAGGCTaGTGTTGGAAAGAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: YPLFESESQHSQLKKQSSTSVAG*CWKEQV
Trigger: CACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGT...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CAA 90 bp TCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTAAAAATTCACATTGGCATATTTaGGTCTCCCCGTCTAGACTG +
Preference number: 3 (lower is better)
Translates to: SYHWSRPINGSQAAFAKNSHWHI*VSPSRL
Trigger: CAGTCTAGACGGGGAGACCAAAATATGCCAATGTGA...ATTTTTAGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522110.1
3UTR TCA 72 bp GAAACAATGGGAGCAGAAGCAGGTGTTATATGCACATaGAGAGTTTCAGTGTTTTGTGTCACGGAGACAATG +
Preference number: 3 (lower is better)
Translates to: ETMGAEAGVICT*RVSVFCVTETM
Trigger: CATTGTCTCCGTGACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CCA 72 bp GTTGCACTGCTGTTATTTTGCATCGAATCAAAACTCTaGGTTCCATGCTGTCATTTGTTAACAAAGCGGCAG +
Preference number: 3 (lower is better)
Translates to: VALLLFCIESKL*VPCCHLLTKRQ
Trigger: CTGCCGCTTTGTTAACAAATGACAGCATGGAACCCAGAGTTTTGATTCGATGCAAAATAACAGCAGTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR GCA 72 bp CCTTGCATTAAACCCATCGTTTTCAGGGCTTTGAATTaGAATGGCAAGTTTGTGTCACACTGTCTTTCCTAT +
Preference number: 3 (lower is better)
Translates to: PCIKPIVFRALN*NGKFVSHCLSY
Trigger: ATAGGAAAGACAGTGTGACACAAACTTGCCATTGCAATTCAAAGCCCTGAAAACGATGGGTTTAATGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR GCA 72 bp CTGTTATTTTGCATCGAATCAAAACTCTGGGTTCCATaGTGTCATTTGTTAACAAAGCGGCAGTGTTCTGAG +
Preference number: 3 (lower is better)
Translates to: LLFCIESKLWVP*CHLLTKRQCSE
Trigger: CTCAGAACACTGCCGCTTTGTTAACAAATGACAGCATGGAACCCAGAGTTTTGATTCGATGCAAAATAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CCA 72 bp CAGTGCGAATGTTATTTCAGAGGAGGCAGAACTCTCTaGCAATGTATAAAACTCGTCATACTACGACCATAT +
Preference number: 3 (lower is better)
Translates to: QCECYFRGGRTL*QCIKLVILRPY
Trigger: ATATGGTCGTAGTATGACGAGTTTTATACATTGCCAGAGAGTTCTGCCTCCTCTGAAATAACATTCGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CAA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACAAGTCAGGTTGGTGTTaGTGCCCTTCTCTTGTAAGA +
Preference number: 3 (lower is better)
Translates to: SKTHLTATENYTDGNFFNKSGWC*CPSLVR
Trigger: TCTTACAAGAGAAGGGCACAAACACCAACCTGACTT...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CAA 90 bp AATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAGTTTCAGTGTTTTGTGTAACCTAGACAACTTATaGCATTCTAATGCCGTTCTC +
Preference number: 3 (lower is better)
Translates to: NGSRSRCYMHMKSFSVLCNLDNL*HSNAVL
Trigger: GAGAACGGCATTAGAATGCAATAAGTTGTCTAGGTT...ACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 72 bp AATCACCTTGCATTAAACCCATCGTTTTCAGGGCTTTaGATTGCAATGGCAAGTTTGTGTCACACTGTCTTT +
Preference number: 3 (lower is better)
Translates to: NHLALNPSFSGL*IAMASLCHTVF
Trigger: AAAGACAGTGTGACACAAACTTGCCATTGCAATTCAAAGCCCTGAAAACGATGGGTTTAATGCAAGGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 72 bp CTTTCCAGCACTTCTCCAAACCAGAAATCTGGTAGCTaGGGAAGTTCCAATATGGAGAAATTGAAATGGATT +
Preference number: 3 (lower is better)
Translates to: LSSTSPNQKSGS*GSSNMEKLKWI
Trigger: AATCCATTTCAATTTCTCCATATTGGAACTTCCTCAGCTACCAGATTTCTGGTTTGGAGAAGTGCTGGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CAA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGATGCACTGCTGTTATTTaGCATCGAATCAAAACTCTG +
Preference number: 3 (lower is better)
Translates to: ASCSRIVVFECICFPYARCTAVI*HRIKTL
Trigger: CAGAGTTTTGATTCGATGCAAAATAACAGCAGTGCA...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR-3UTR CAA 90 bp TCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTAAAAATTACTTCTCCCAAAAATaGGGAACTCTACACTTCAAT +
Preference number: 3 (lower is better)
Translates to: SYHWSRPINGSQAAFAKNYFSQK*GTLHFN
Trigger: ATTGAAGTGTAGAGTTCCCAATTTTTGGGAGAAGTA...ATTTTTAGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522110.1
3UTR TCA 72 bp CCTTGCATTTGTGTGTATCTATCCACTATTCGAGTCTaGATCCCAGCATTCTCAACTAAAGAAACAATCAAG +
Preference number: 3 (lower is better)
Translates to: PCICVYLSTIRV*IPAFSTKETIK
Trigger: CTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATAGATACACACAAATGCAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR TCA 72 bp GGCATTTCTCTGTATACTTCAATGCACTTTGTATTTTaGGAGCAAAGGGAAATCAGTCTAGCCACTAACATC +
Preference number: 3 (lower is better)
Translates to: GISLYTSMHFVF*EQREISLATNI
Trigger: GATGTTAGTGGCTAGACTGATTTCCCTTTGCTCTCAAAATACAAAGTGCATTGAAGTATACAGAGAAATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CCA 72 bp GCCCTCTTAATGAATATCAACTCTCAAAGCTTCACCTaGAATTCTAGTGCTATTAAACAAGTAGCCAAGACA +
Preference number: 3 (lower is better)
Translates to: ALLMNINSQSFT*NSSAIKQVAKT
Trigger: TGTCTTGGCTACTTGTTTAATAGCACTAGAATTCCAGGTGAAGCTTTGAGAGTTGATATTCATTAAGAGGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CCA 72 bp AAACATGTGTTGGGTTGTATTAAACCTCTTTTGGTCTaGACTGTCCTCAAAGGACATACCCTTGTAAAAACA +
Preference number: 3 (lower is better)
Translates to: KHVLGCIKPLLV*TVLKGHTLVKT
Trigger: TGTTTTTACAAGGGTATGTCCTTTGAGGACAGTCCAGACCAAAAGAGGTTTAATACAACCCAACACATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp TCCTGGTTCTTCATGGTGGGGTCTGCACCATGCGCTAGGAGGAGGGCGCACAGCGTGGGGTCTGCACCATaGGCTAGGAGGAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: SWFFMVGSAPCARRRAHSVGSAP*ARRRAH
Trigger: GTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCAC...GCTGTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCACCATGAAGAACCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR GCA 90 bp CTAGGTCTTCTGCTCTGCGGCTGTTGCGGTCTGGGAAGGGGCTTCTGGCTTCATCCAATGACTGAGTGGTaGCCTGGAGGCGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGLLLCGCCGLGRGFWLHPMTEW*PGGAWA
Trigger: GGCCCACGCGCCTCCAGGGCACCACTCAGTCATTGG...ATGAAGCCAGAAGCCCCTTCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS-3UTR CCA 90 bp GAAAGGAACCTCCAGTCTTCTGGTGAGGTGATGAAGAACCATAACCACGCCCCCCCAGGCCGCTGGCCGTaGGAGAGGCTGGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ERNLQSSGEVMKNHNHAPPGRWP*ERLGWS
Trigger: GGACCACCCCAGCCTCTCCCACGGCCAGCGGCCTGG...GGGGGCGTGGTTATGGTTCTTCATCACCTCACCAGAAGACTGGAGGTTCCTTTC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CCA 90 bp ATGGTGGGGTCTGCACCATGCGCTAGGAGGAGGGCGCACAGCTGCGTCCTTCCTTGCGTCCTTCCTTTCTaGGCTGCTTCATGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: MVGSAPCARRRAHSCVLPCVLPF*AASWRG
Trigger: TCCCCTCCATGAAGCAGCCCAGAAAGGAAGGACGCA...AGGAAGGACGCAGCTGTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR TCA 90 bp TTCACCAGCAGGCATTCACTAGGTCTTCTGCTCTGCGGCTGTTGCGGTCTGGGACGGTCTACCAATGACTaGGTGGTGCCCTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: FTSRHSLGLLLCGCCGLGRSTND*VVPWRR
Trigger: GCGCCTCCAGGGCACCACTCAGTCATTGGTAGACCG...TCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAGTGAATGCCTGCTGGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS-3UTR GCA 90 bp TGGTGGGGTCTGCACCATGCGCTAGGAGGAGGGCGCACAGCTGCGTCCTTCCTTCAGGTTATTATAGCCTaGTGCCAGGTGCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: WWGLHHALGGGRTAASFLQVIIA*CQVQRG
Trigger: ACCCCTCTGCACCTGGCAGCAGGCTATAATAACCTG...AAGGAAGGACGCAGCTGTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR CCA 90 bp CCTTCCTGGTTCTTCATGGTGGGGTCTGCACCATGCGCTAGGAGGAGGGCGCACCCTGGTTCTTCATGGTaGGGTCTGCACCATGCGCTA +
Preference number: 4 (lower is better)
Translates to: PSWFFMVGSAPCARRRAHPGSSW*GLHHAL
Trigger: TAGCGCATGGTGCAGACCCCACCATGAAGAACCAGG...GTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCACCATGAAGAACCAGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR CCA 90 bp CTGCACCATGCGCTAGGAGGAGGGCGCACAGCTGCGTCCTTCCTTTCTGGGCTGAGATCCAGAGGCGTCTaGCCTTCCTGGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: LHHALGGGRTAASFLSGLRSRGV*PSWFFM
Trigger: CATGAAGAACCAGGAAGGCCAGACGCCTCTGGATCT...CAGCCCAGAAAGGAAGGACGCAGCTGTGCGCCCTCCTCCTAGCGCATGGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR CCA 90 bp CACCAGCAGGCATTCACTAGGTCTTCTGCTCTGCGGCTGTTGCGGTCTGGGAAGCTACCAATGACTGAGTaGTGCCCTGGAGGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: HQQAFTRSSALRLLRSGKLPMTE*CPGGAW
Trigger: CCACGCGCCTCCAGGGCACCACTCAGTCATTGGTAG...CTTCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAGTGAATGCCTGCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS-3UTR GCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCGTGGGGTCTGCACCATaGGCTAGGAGGAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFVGSAP*ARRRAH
Trigger: GTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCAC...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCCCAATGACTGAGTGGTaGCCTGGAGGCGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFPMTEW*PGGAWA
Trigger: GGCCCACGCGCCTCCAGGGCACCACTCAGTCATTGG...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GAAAGGAACCTCCAGTCTTCTGGTGAGGTGATGAAGAACCATAACCACGCCCCCGACCCCAGCGGCAGATaGAGTAGAAACCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ERNLQSSGEVMKNHNHAPDPSGR*SRNRWD
Trigger: GTCCCAGCGGTTTCTACTTCATCTGCCGCTGGGGTC...GGGGGCGTGGTTATGGTTCTTCATCACCTCACCAGAAGACTGGAGGTTCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR TCA 90 bp AGGCATTCACTAGGTCTTCTGCTCTGCGGCTGTTGCGGTCTGGGAAGGGGCTTCTCCCAGGTTGAAATCTaGTCTGGCCTTCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: RHSLGLLLCGCCGLGRGFSQVEI*SGLHQQ
Trigger: CTGCTGGTGAAGGCCAGATCAGATTTCAACCTGGGA...GAAGCCCCTTCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAGTGAATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS-3UTR GCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGATGTCCCAGGTCCTGCTaGCCCAGGCCCCAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRCPRSC*PRPQWC
Trigger: GCACCACTGGGGCCTGGGGCAGCAGGACCTGGGACA...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp CTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTCGGGGGTGGGGACAATaGCCAATAACCCTTCGTGCC +
Preference number: 4 (lower is better)
Translates to: LQYCPEDLCGRLVLERASRGWGQ*PITLRA
Trigger: GGCACGAAGGGTTATTGGGCATTGTCCCCACCCCCG...ACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTCCAGGCCGCTGGCCGTaGGAGAGGCTGGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSPGRWP*ERLGWS
Trigger: GGACCACCCCAGCCTCTCCCACGGCCAGCGGCCTGG...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCTGCCCCAGGCCCCAGTaGTGCTGTGCTGCTAACTCC +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFCPRPQ*CCAANS
Trigger: GGAGTTAGCAGCACAGCACCACTGGGGCCTGGGGCA...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCGGGGTACAGAGCTTCTaGACTCTTGCCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFGVQSF*TLARQP
Trigger: GGGCTGCCTGGCAAGAGTGCAGAAGCTCTGTACCCC...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp CTTCACCAGCAGGCATTCACTAGGTCTTCTGCTCTGCGGCTGTTGCGGTCTGGGGACATATTCAGCATATaGCAGCCCATTGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: LHQQAFTRSSALRLLRSGDIFSI*QPIDAR
Trigger: CCGAGCGTCAATGGGCTGGCATATGCTGAATATGTC...CCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAGTGAATGCCTGCTGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS-3UTR CCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCGGTTGTCTATGCTGCTaGCAGCCGAGAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFGCLCC*QPRGRR
Trigger: CCTCCTGCCTCTCGGCTGCCAGCAGCATAGACAACC...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp CACCAGCAGGCATTCACTAGGTCTTCTGCTCTGCGGCTGTTGCGGTCTGGGAAGCTGGGAAGGGGCTTCTaGCTTCATGATCTGGTAAGT +
Preference number: 4 (lower is better)
Translates to: HQQAFTRSSALRLLRSGKLGRGF*LHDLVS
Trigger: ACTTACCAGATCATGAAGCCAGAAGCCCCTTCCCAG...CTTCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAGTGAATGCCTGCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS-3UTR TCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCTGCCAGGTCCAGGGCTaGTTTCCCATCAGTGTTCCG +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFCQVQG*FPISVP
Trigger: CGGAACACTGATGGGAAATCAGCCCTGGACCTGGCA...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp CTTCACCAGCAGGCATTCACTAGGTCTTCTGCTCTGCGGCTGTTGCGGTCTGGGAATCCAGTCCCAGGTTaGAATCTGATCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LHQQAFTRSSALRLLRSGNPVPG*NLIWPS
Trigger: TGAAGGCCAGATCAGATTTCAACCTGGGACTGGATT...CCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAGTGAATGCCTGCTGGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS-3UTR GCA 90 bp AATTCACACTTTTTGAGGGAGAACTTTGTGCCAGATACTTCTCACCAAATGCTCCGGGCGGATCCCGACTaGCATCCCCCTCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: NSHFLRENFVPDTSHQMLRADPD*HPPPAA
Trigger: CGCTGCCGGAGGGGGATGGCAGTCGGGATCCGCCCG...GAGCATTTGGTGAGAAGTATCTGGCACAAAGTTCTCCCTCAAAAAGTGTGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp TGTTTCTCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTTGTCCCAGGTCCTGCTaGCCCAGGCCCCAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CFSYHWSRPINGSQAAFACPRSC*PRPQWC
Trigger: GCACCACTGGGGCCTGGGGCAGCAGGACCTGGGACA...AGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp CCTGGTTCTTCATGGTGGGGTCTGCACCATGCGCTAGGAGGAGGGCGCACAGCTCGCCCACTTATCTGTTaGATTTACACACGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: PGSSWWGLHHALGGGRTARPLIC*IYTRVV
Trigger: TACAACACGTGTGTAAATGCAACAGATAAGTGGGCG...AGCTGTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCACCATGAAGAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR CCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCTGGTACTGCAACAGCTaGTACCGTCAACCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFWYCNS*YRQPGP
Trigger: CGGACCCGGTTGACGGTACCAGCTGTTGCAGTACCA...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp TGTTTCTCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTACTGCCACTGCCGGCTaGGTTGGGAGCGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: CFSYHWSRPINGSQAAFATATAG*VGSDPS
Trigger: GCTGGGGTCGCTCCCAACCCAGCCGGCAGTGGCAGT...AGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCGGCCCCGCTCACTGCTaGGACCCCTGTCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLGPAHC*DPCPRS
Trigger: GGACCTGGGACAGGGGTCCCAGCAGTGAGCGGGGCC...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GAAAGGAACCTCCAGTCTTCTGGTGAGGTGATGAAGAACCATAACCACGCCCCCAGAAGAGGACGACGGTaGATTGTTACTGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: ERNLQSSGEVMKNHNHAPRRGRR*IVTATA
Trigger: GGCAGTGGCAGTAACAATTCACCGTCGTCCTCTTCT...GGGGGCGTGGTTATGGTTCTTCATCACCTCACCAGAAGACTGGAGGTTCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR TCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGACGCTCGGTCTACCAATaGCTGAGTGGTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGRSVYQ*LSGALE
Trigger: CTCCAGGGCACCACTCAGTCATTGGTAGACCGAGCG...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTAATTGTTACTGCCACTaGCGGCTGGGTTGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSNCYCH*RLGWER
Trigger: TCGCTCCCAACCCAGCCGGCAGTGGCAGTAACAATT...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GAAAGGAACCTCCAGTCTTCTGGTGAGGTGATGAAGAACCATAACCACGCCCCCCAAAAGTCTCTGACCTaGAGCGAAGTGCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ERNLQSSGEVMKNHNHAPQKSLT*SEVQGR
Trigger: TCTCCCCTGCACTTCGCTGCAGGTCAGAGACTTTTG...GGGGGCGTGGTTATGGTTCTTCATCACCTCACCAGAAGACTGGAGGTTCCTTTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCTTCTGGGCTGCTTCATaGAGGGGAGTAAACGCCCAC +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFFWAAS*RGVNAH
Trigger: GTGGGCGTTTACTCCCCTCCATGAAGCAGCCCAGAA...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGACTACCAATGACTGAGTaGTGCCCTGGAGGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGLPMTE*CPGGAW
Trigger: CCACGCGCCTCCAGGGCACCACTCAGTCATTGGTAG...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGCGGCTGTTGCGGTCTaGGAAGGGGCTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSAAVAV*EGASGF
Trigger: GAAGCCAGAAGCCCCTTCCCAGACCGCAACAGCCGC...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000517770.1
CDS-3UTR CCA 90 bp CTTCCTGGTTCTTCATGGTGGGGTCTGCACCATGCGCTAGGAGGAGGGCGCACACTGGAAAGGAGGTCTTaGAATCCAACTTTTACTACC +
Preference number: 4 (lower is better)
Translates to: LPGSSWWGLHHALGGGRTLERRS*NPTFTT
Trigger: GGTAGTAAAAGTTGGATTCCAAGACCTCCTTTCCAG...TGTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCACCATGAAGAACCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR TCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTAGAAGAGGACGACGGTaGATTGTTACTGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSRRGRR*IVTATA
Trigger: GGCAGTGGCAGTAACAATTCACCGTCGTCCTCTTCT...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTCGGGCGGATCCCGACTaGCATCCCCCTCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSRADPD*HPPPAA
Trigger: CGCTGCCGGAGGGGGATGGCAGTCGGGATCCGCCCG...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCCTTCCTTCCAAAACCTaGAGCGAAGTGCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFLPSKT*SEVQGR
Trigger: TCTCCCCTGCACTTCGCTGCAGGTTTTGGAAGGAAG...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp TGTTTCTCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTTGCCCCAGGCCCCAGTaGTGCTGTGCTGCTAACTCC +
Preference number: 4 (lower is better)
Translates to: CFSYHWSRPINGSQAAFACPRPQ*CCAANS
Trigger: GGAGTTAGCAGCACAGCACCACTGGGGCCTGGGGCA...AGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CCA 90 bp GTGAGTTTTGTAATGAGTACTGTGCAACCACTGAAGAATTCCTTGGATTCACTTGGCCCCGCTCACTGCTaGGACCCCTGTCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSFVMSTVQPLKNSLDSLGPAHC*DPCPRS
Trigger: GGACCTGGGACAGGGGTCCCAGCAGTGAGCGGGGCC...AAGTGAATCCAAGGAATTCTTCAGTGGTTGCACAGTACTCATTACAAAACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR TCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTGACCCCAGCGGCAGATaGAGTAGAAACCGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSDPSGR*SRNRWD
Trigger: GTCCCAGCGGTTTCTACTTCATCTGCCGCTGGGGTC...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTCGCTCGGTCTACCAATaGCTGAGTGGTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSRSVYQ*LSGALE
Trigger: CTCCAGGGCACCACTCAGTCATTGGTAGACCGAGCG...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000517770.1
CDS-3UTR TCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTTCTGAGCAAAGCGCATaGGGCCTAATACCCATTCCT +
Preference number: 4 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSSEQSA*GLIPIP
Trigger: AGGAATGGGTATTAGGCCTCATGCGCTTTGCTCAGA...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAAAACCTGCAGCGAAGTaGAGGGGAGAAGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRKPAAK*RGEDFR
Trigger: CCGGAAGTCTTCTCCCCTGCACTTCGCTGCAGGTTT...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTGACATATTCAGCATATaGCAGCCCATTGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSDIFSI*QPIDAR
Trigger: CCGAGCGTCAATGGGCTGGCATATGCTGAATATGTC...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGAACTGCCACTGCCGGCTaGGTTGGGAGCGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: ASCSRIVVFECICFPYARTATAG*VGSDPS
Trigger: GCTGGGGTCGCTCCCAACCCAGCCGGCAGTGGCAGT...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGACGAAGTGTAAGGGCGTaGAATGCCGGCCCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGRSVRA*NAGPLS
Trigger: ACTTAGAGGGCCGGCATTCCACGCCCTTACACTTCG...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GCTTCATGGAGGGGAGTAAACGCCCACTTATCTGTTGCATTTACACACGTGTTGCTTCCTGGTTCTTCATaGTGGGGTCTGCACCATGCG +
Preference number: 4 (lower is better)
Translates to: ASWRGVNAHLSVAFTHVLLPGSS*WGLHHA
Trigger: CGCATGGTGCAGACCCCACCATGAAGAACCAGGAAG...CAACACGTGTGTAAATGCAACAGATAAGTGGGCGTTTACTCCCCTCCATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR TCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCGGGGGTGGATGCTGGTaGGATCAGAGAGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLGGGCW*DQRGTH
Trigger: GTGAGTGCCTCTCTGATCTCACCAGCATCCACCCCC...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTTGGGGGAAAGGTGCTTaGAAATACACACCACTTCTG +
Preference number: 4 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSWGKGA*KYTPLL
Trigger: CAGAAGTGGTGTGTATTTTCAAGCACCTTTCCCCCA...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTGGGTGCGCGGGTGTGTaGGGGACACCCCACTACCAG +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSGCAGV*GTPHYQ
Trigger: CTGGTAGTGGGGTGTCCCTCACACACCCGCGCACCC...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGGCCGGCCATGTCCTTTaGATTTACGTTTGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGAGHVL*IYVCRV
Trigger: GACGCGGCAAACGTAAATGCAAAGGACATGGCCGGC...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGTTTGGGTCAGCTCCGTaGTGCAGCAGCACAATGCAC +
Preference number: 4 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGFGSAP*CSSTMH
Trigger: GTGCATTGTGCTGCTGCAGCACGGAGCTGACCCAAA...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGAGATATCGTCAGCTGTTaGCAGATCCAGAGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGDIVSC*QIQRRL
Trigger: CAGACGCCTCTGGATCTGGCAACAGCTGACGATATC...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTCTAGGTCTTCTGCTCTaGGGCTGTTGCGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSLGLLL*GCCGLG
Trigger: TCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAG...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000517770.1
CDS-3UTR GCA 90 bp CTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTACAAGGTATCACAGTTaGTGTCGTATCCCCACATAC +
Preference number: 4 (lower is better)
Translates to: LQYCPEDLCGRLVLERASTRYHS*CRIPTY
Trigger: GTATGTGGGGATACGACAGCAACTGTGATACCTTGT...ACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCTACAGATTGTGCTGGTaGTACTGCAACAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFYRLCW*YCNSWY
Trigger: GTACCAGCTGTTGCAGTACCACCAGCACAATCTGTA...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTGTTATCCCTGGCATTTaGATCAGCTCCTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSVIPGI*ISSLAQ
Trigger: TTGTGCCAAGGAGCTGATCCAAATGCCAGGGATAAC...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCACCAGGCAGCCCTTCTTaGCAGCATCCAACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSPGSPS*QHPTKQ
Trigger: CTGCTTTGTTGGATGCTGCCAAGAAGGGCTGCCTGG...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCCAGGTGCAGAGGGGTTaGATTTCTGCCCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLQVQRG*ISALGV
Trigger: GACACCCAGGGCAGAAATTCAACCCCTCTGCACCTG...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTGTGACATATATAGCATaGCCTGTCCTTGTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSVTYIA*PVLVCR
Trigger: CCTACACACAAGGACAGGTCATGCTATATATGTCAC...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGTCCCAGGTTGAAATCTaGTCTGGCCTTCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGSQVEI*SGLHQQ
Trigger: CTGCTGGTGAAGGCCAGATCAGATTTCAACCTGGGA...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGATGTTTACGTTTGGGATaGAGAGAGGCCACAGCACAG +
Preference number: 4 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGCLRLG*REATAQ
Trigger: CTGTGCTGTGGCCTCTCTGCATCCCAAACGTAAACA...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAATGGGCTCTTTCGGCTaGAACATGCAGGGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSMGSFG*NMQGSH
Trigger: ATGACTCCCCTGCATGTTGCAGCCGAAAGAGCCCAT...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp CTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTAAGATACTCTGGGTATaGCTGTTCTCCTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LQYCPEDLCGRLVLERASKILWV*LFSSVD
Trigger: ATCTACAGAGGAGAACAGGCATACCCAGAGTATCTT...ACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp CTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTGTCCTAACTTTTGAGTaGACTCATGATGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: LQYCPEDLCGRLVLERASVLTFE*THDDLW
Trigger: CCAAAGGTCATCATGAGTGCACTCAAAAGTTAGGAC...ACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp CTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTAGGGCACTTAATTTATaGCTGAGTCAAGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: LQYCPEDLCGRLVLERASRALNL*LSQVSS
Trigger: GCTGGATACTTGACTCAGGCATAAATTAAGTGCCCT...ACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp TGTTTCTCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTGTCCTAACCGGACCCTaGACCCAAACCCATAACCCT +
Preference number: 4 (lower is better)
Translates to: CFSYHWSRPINGSQAAFAVLTGP*TQTHNP
Trigger: AGGGTTATGGGTTTGGGTGCAGGGTCCGGTTAGGAC...AGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCGTTGAATTTCTGCCCTaGGTGTCTCTGCAGTTGATA +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFVEFLP*VSLQLI
Trigger: TATCAACTGCAGAGACACCCAGGGCAGAAATTCAAC...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTCTTCCTGGTTCTTCATaGTGGGGTCTGCACCATGCG +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSLPGSS*WGLHHA
Trigger: CGCATGGTGCAGACCCCACCATGAAGAACCAGGAAG...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTCGCCATCCCCTGCATTaGAGGCTCCTCCTACGGCCA +
Preference number: 4 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFRHPLH*RLLLRP
Trigger: TGGCCGTAGGAGGAGCCTCCAATGCAGGGGATGGCG...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp CTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTCCTTTGATTAATTTGTaGCGGTGCCCATATGCATTG +
Preference number: 4 (lower is better)
Translates to: LQYCPEDLCGRLVLERASPLINL*RCPYAL
Trigger: CAATGCATATGGGCACCGCCACAAATTAATCAAAGG...ACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGTCCCGAAGACCTCTGTaGCAGGCTTGTGTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGSRRPL*QACVGK
Trigger: CTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGA...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGACCTCTTTGAAAGGATaGGAGGTAGGGCAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGTSLKG*EVGQVR
Trigger: TCGCACCTGCCCTACCTCCCATCCTTTCAAAGAGGT...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 72 bp GCTTGTGTTGGAAAGAGCAAGTGGCCTTCACCGGCTTaGACTTCTCTGAATTTAGGCGTTCCTAAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ACVGKSKWPSPA*TSLNLGVPKSG
Trigger: ACCTGACTTAGGAACGCCTAAATTCAGAGAAGTCAAAGCCGGTGAAGGCCACTTGCTCTTTCCAACACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGACCTCTCAGTAAGTCCTaGATATCTGTGTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRPLSKS*ISVSPS
Trigger: GGAAGGAGACACAGATATTCAGGACTTACTGAGAGG...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTTCTTTCAACTCTTCATaGCCCATATCAGCCAACACA +
Preference number: 4 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSSFNSS*PISANT
Trigger: TGTGTTGGCTGATATGGGTCATGAAGAGTTGAAAGA...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTCGGTCTACCAATGACTaGGTGGTGCCCTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSRSTND*VVPWRR
Trigger: GCGCCTCCAGGGCACCACTCAGTCATTGGTAGACCG...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAAATCCAGTCCCAGGTTaGAATCTGATCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRNPVPG*NLIWPS
Trigger: TGAAGGCCAGATCAGATTTCAACCTGGGACTGGATT...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GAAAGGAACCTCCAGTCTTCTGGTGAGGTGATGAAGAACCATAACCACGCCCCCGTTTCCAGAAACTTTTaGTTCAGTTGCGTATGTGAC +
Preference number: 4 (lower is better)
Translates to: ERNLQSSGEVMKNHNHAPVSRNF*FSCVCD
Trigger: GTCACATACGCAACTGAATCAAAAGTTTCTGGAAAC...GGGGGCGTGGTTATGGTTCTTCATCACCTCACCAGAAGACTGGAGGTTCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTCGACGGTACAGATTGTaGTGGTGGTACTGCAACAGC +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSRRYRL*WWYCNS
Trigger: GCTGTTGCAGTACCACCAGCACAATCTGTACCGTCG...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GGGAACTCTACACTTCAATTACTCACAAAAATGAAAAGTGACCTTAATCCAGGGGGGACACGTCCCCATTaGGACAGGCCTCCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: GNSTLQLLTKMKSDLNPGGTRPH*DRPPAV
Trigger: AACTGCTGGAGGCCTGTCGCAATGGGGACGTGTCCC...CCCTGGATTAAGGTCACTTTTCATTTTTGTGAGTAATTGAAGTGTAGAGTTCCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGATCACTCAGAATCTGCTaGACTGCTTCATTGCCCATC +
Preference number: 4 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRSLRIC*TASLPI
Trigger: GATGGGCAATGAAGCAGTGCAGCAGATTCTGAGTGA...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTGAGGGGTTGAATTTCTaGCCTGGGTGTCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSEGLNF*PGCLCS
Trigger: ACTGCAGAGACACCCAGGGCAGAAATTCAACCCCTC...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGTGGGGTCTGCACCATaGGCTAGGAGGAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAVGSAP*ARRRAH
Trigger: GTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCAC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCGCGGCGCCATCCCCTaGATTGGAGGCTCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARGAIP*IGGSSY
Trigger: GTAGGAGGAGCCTCCAATGCAGGGGATGGCGCCGCG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCAATGACTGAGTGGTaGCCTGGAGGCGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPMTEW*PGGAWA
Trigger: GGCCCACGCGCCTCCAGGGCACCACTCAGTCATTGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
CDS-3UTR GCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCACAATGGGGGAAAGGTaGTTGAAAATACACACCACT +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFTMGER*LKIHTT
Trigger: AGTGGTGTGTATTTTCAAGCACCTTTCCCCCATTGT...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCGGGAGGCGGAGCTTaGAATGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPGGGA*NEPRSR
Trigger: GCGCGATCTCGGCTCATTGCAAGCTCCGCCTCCCGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518281.5
CDS-3UTR CCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGAGCTCAGCCAGAAGCTTaGGTTGCACTGCTAATGATT +
Preference number: 4 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGAQPEA*VALLMI
Trigger: AATCATTAGCAGTGCAACCCAAGCTTCTGGCTGAGC...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCGGCTTTGAATTGCAATaGCAAGTTTGTGTCACACTG +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFGFELQ*QVCVTL
Trigger: CAGTGTGACACAAACTTGCCATTGCAATTCAAAGCC...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTTATGCAGAACTTCCATaGCATCATTATGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSYAELP*HHYGLF
Trigger: AAAGAGCCCATAATGATGTCATGGAAGTTCTGCATA...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp AATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAGTTTCAGTGTTTTGTGTCTGCTAAAGGGCCAGTaGGGTTGTCTATGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NGSRSRCYMHMKSFSVLCLLKGQ*GCLCCW
Trigger: CCAGCAGCATAGACAACCTCACTGGCCCTTTAGCAG...ACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCGGTCTACCAATGACTaGGTGGTGCCCTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARSTND*VVPWRR
Trigger: GCGCCTCCAGGGCACCACTCAGTCATTGGTAGACCG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
CDS-3UTR TCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGATCTCTGCAAACACTCTaGATCAACACAAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGSLQTL*INTRAF
Trigger: GAAAGCCCTTGTGTTGATTCAGAGTGTTTGCAGAGA...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GAAAGGAACCTCCAGTCTTCTGGTGAGGTGATGAAGAACCATAACCACGCCCCCCAAATAGAAGACACGTaGTTTGAGAAACAAGCACTA +
Preference number: 4 (lower is better)
Translates to: ERNLQSSGEVMKNHNHAPQIEDT*FEKQAL
Trigger: TAGTGCTTGTTTCTCAAATCACGTGTCTTCTATTTG...GGGGGCGTGGTTATGGTTCTTCATCACCTCACCAGAAGACTGGAGGTTCCTTTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp ATGCATGTCTGGCAAATCAAAAACAAGCTTGTTGCCTGTCGTATGTGTATATTTGGGACACGTCCCCATTaGGACAGGCCTCCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: MHVWQIKNKLVACRMCIFGTRPH*DRPPAV
Trigger: AACTGCTGGAGGCCTGTCGCAATGGGGACGTGTCCC...AAATATACACATACGACAGGCAACAAGCTTGTTTTTGATTTGCCAGACATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTGCTGCAGCAGCACAATaGACACATCGATCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSAAAAQ*THRSSL
Trigger: AAGGGAAGATCGATGTGTGCATTGTGCTGCTGCAGC...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp AATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAGTTTCAGTGTTTTGTGTAAGCCCGTGTCAACCTaGATCTCCAGTACTGTCCCG +
Preference number: 4 (lower is better)
Translates to: NGSRSRCYMHMKSFSVLCKPVST*ISSTVP
Trigger: CGGGACAGTACTGGAGATGCAGGTTGACACGGGCTT...ACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp CTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTAAACTCTGGGTTCCATaGTGTCATTTGTTAACAAAG +
Preference number: 4 (lower is better)
Translates to: LQYCPEDLCGRLVLERASKLWVP*CHLLTK
Trigger: CTTTGTTAACAAATGACAGCATGGAACCCAGAGTTT...ACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGAGGGGGTTGTAACCCCTaGCACTGTTGGGTCACACAG +
Preference number: 4 (lower is better)
Translates to: ASCSRIVVFECICFPYARGGCNP*HCWVTQ
Trigger: CTGTGTGACCCAACAGTGGCAGGGGTTACAACCCCC...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GGGAACTCTACACTTCAATTACTCACAAAAATGAAAAGTGACCTTAATCCAGGGTGGTACTGCAACAGCTaGTACCGTCAACCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GNSTLQLLTKMKSDLNPGWYCNS*YRQPGP
Trigger: CGGACCCGGTTGACGGTACCAGCTGTTGCAGTACCA...CCCTGGATTAAGGTCACTTTTCATTTTTGTGAGTAATTGAAGTGTAGAGTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CCA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGCAGTTGATATTCTCTaGGGTACAGAGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSAVDIL*GTELLH
Trigger: GTGCAGAAGCTCTGTACCCCAGAGAATATCAACTGC...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCGCCATCCCCTGCATTaGAGGCTCCTCCTACGGCCA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARHPLH*RLLLRP
Trigger: TGGCCGTAGGAGGAGCCTCCAATGCAGGGGATGGCG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTGCGGCTGTTGCGGTCTaGGAAGGGGCTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTIAAVAV*EGASGF
Trigger: GAAGCCAGAAGCCCCTTCCCAGACCGCAACAGCCGC...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000517770.1
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGCGGCTGTTGCGGTCTaGGAAGGGGCTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAAAVAV*EGASGF
Trigger: GAAGCCAGAAGCCCCTTCCCAGACCGCAACAGCCGC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
CDS-3UTR CCA 90 bp CTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTCCAATGATGCATGTCTaGCAAATCAAAAACAAGCTT +
Preference number: 4 (lower is better)
Translates to: LQYCPEDLCGRLVLERASPMMHV*QIKNKL
Trigger: AAGCTTGTTTTTGATTTGCCAGACATGCATCATTGG...ACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTATCCCCTGGATCCATTaGGGCTGCCATGATACAGAA +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSIPWIH*GCHDTE
Trigger: TTCTGTATCATGGCAGCCCCAATGGATCCAGGGGAT...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCGCCATGCTTTTATATTaGAAAGGGTTCTTCATACGG +
Preference number: 4 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFAMLLY*KGFFIR
Trigger: CCGTATGAAGAACCCTTTCCAATATAAAAGCATGGC...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAAACCCCTGCCACTGTTaGGTCACACAGAGACTAAAA +
Preference number: 4 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSNPCHC*VTQRLK
Trigger: TTTTAGTCTCTGTGTGACCCAACAGTGGCAGGGGTT...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTTGCATTTACACACGTGTTGTATTTTATCAATAAAGCCGCTATGTCAACATGCCAGGTGCAGAGGGGTTaGATTTCTGCCCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: VAFTHVLYFINKAAMSTCQVQRG*ISALGV
Trigger: GACACCCAGGGCAGAAATTCAACCCCTCTGCACCTG...GCATGTTGACATAGCGGCTTTATTGATAAAATACAACACGTGTGTAAATGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGGGGGTGGATGCTGGTaGGATCAGAGAGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAGGGCW*DQRGTH
Trigger: GTGAGTGCCTCTCTGATCTCACCAGCATCCACCCCC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCGCTCGGTCTACCAATaGCTGAGTGGTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARSVYQ*LSGALE
Trigger: CTCCAGGGCACCACTCAGTCATTGGTAGACCGAGCG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
CDS-3UTR TCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTATGATTTTGTCAGCGTaGCTTTGTGCAAAATATCCT +
Preference number: 4 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSMILSA*LCAKYP
Trigger: AGGATATTTTGCACAAAGTCACGCTGACAAAATCAT...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GGGAACTCTACACTTCAATTACTCACAAAAATGAAAAGTGACCTTAATCCAGGGAATTGTTACTGCCACTaGCGGCTGGGTTGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: GNSTLQLLTKMKSDLNPGNCYCH*RLGWER
Trigger: TCGCTCCCAACCCAGCCGGCAGTGGCAGTAACAATT...CCCTGGATTAAGGTCACTTTTCATTTTTGTGAGTAATTGAAGTGTAGAGTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp GGGAACTCTACACTTCAATTACTCACAAAAATGAAAAGTGACCTTAATCCAGGGGCCGGCCATGTCCTTTaGATTTACGTTTGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: GNSTLQLLTKMKSDLNPGAGHVL*IYVCRV
Trigger: GACGCGGCAAACGTAAATGCAAAGGACATGGCCGGC...CCCTGGATTAAGGTCACTTTTCATTTTTGTGAGTAATTGAAGTGTAGAGTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGGGGTACAGAGCTTCTaGACTCTTGCCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAGVQSF*TLARQP
Trigger: GGGCTGCCTGGCAAGAGTGCAGAAGCTCTGTACCCC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGGTGGCGGTGCCCATATaGATTGATGCCTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGVAVPI*IDAYFF
Trigger: AAAGAAATAGGCATCAATGCATATGGGCACCGCCAC...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGATTCATGGTGCTAAACTaGAGAAAGGATTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRFMVLN*RKDFPR
Trigger: CCTTGGGAAATCCTTTCTGCAGTTTAGCACCATGAA...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTCTAGGTCTTCTGCTCTaGGGCTGTTGCGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSLGLLL*GCCGLG
Trigger: TCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAG...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACTGCGTCCTTCCTTTCTaGGCTGCTTCATGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SKTHLTATENYTDGNFFNCVLPF*AASWRG
Trigger: TCCCCTCCATGAAGCAGCCCAGAAAGGAAGGACGCA...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGGTTGTCTATGCTGCTaGCAGCCGAGAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAGCLCC*QPRGRR
Trigger: CCTCCTGCCTCTCGGCTGCCAGCAGCATAGACAACC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCTACCAATGACTGAGTaGTGCCCTGGAGGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALPMTE*CPGGAW
Trigger: CCACGCGCCTCCAGGGCACCACTCAGTCATTGGTAG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
CDS-3UTR CCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCCTGGGAAGGGGCTTCTaGCTTCATGATCTGGTAAGT +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLLGRGF*LHDLVS
Trigger: ACTTACCAGATCATGAAGCCAGAAGCCCCTTCCCAG...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAACATTCAAACTAGTCTaGATGCCTAGTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRTFKLV*MPSSST
Trigger: AGTGCTGGAACTAGGCATCCAGACTAGTTTGAATGT...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTATTTTAAACTACGTCTaGGGGAAGGTAAGTAAGACA +
Preference number: 4 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSILNYV*GKVSKT
Trigger: TGTCTTACTTACCTTCCCCCAGACGTAGTTTAAAAT...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 72 bp TGCATCGAATCAAAACTCTGGGTTCCATGCTGTCATTaGTTAACAAAGCGGCAGTGTTCTGAGCAAAGCGCA +
Preference number: 4 (lower is better)
Translates to: CIESKLWVPCCH*LTKRQCSEQSA
Trigger: TGCGCTTTGCTCAGAACACTGCCGCTTTGTTAACAAATGACAGCATGGAACCCAGAGTTTTGATTCGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 72 bp CACAAGAGGGATTCGGATACAATGGGGGAAAGGTGCTaGAAAATACACACCACTTCTGTTTGCAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: HKRDSDTMGERC*KIHTTSVCKAI
Trigger: AATGGCCTTGCAAACAGAAGTGGTGTGTATTTTCAAGCACCTTTCCCCCATTGTATCCGAATCCCTCTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTGCCAGGTCCAGGGCTaGTTTCCCATCAGTGTTCCG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNACQVQG*FPISVP
Trigger: CGGAACACTGATGGGAAATCAGCCCTGGACCTGGCA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGACTATGCAAAGCAGTCTaGCCAAGGGTGTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: ASCSRIVVFECICFPYARLCKAV*PRVSSA
Trigger: TGCACTGGACACCCTTGGTCAGACTGCTTTGCATAG...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTAGCCTTGTAAGGAGATaGTGGAGGGGTCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSSLVRR*WRGQSR
Trigger: ACGGCTCTGACCCCTCCATCATCTCCTTACAAGGCT...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCAGGTGCAGAGGGGTTaGATTTCTGCCCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAQVQRG*ISALGV
Trigger: GACACCCAGGGCAGAAATTCAACCCCTCTGCACCTG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCACATGGCCGACTCACTaGCACACCTTTCAAACACTA +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLTWPTH*HTFQTL
Trigger: TAGTGTTTGAAAGGTGTGTCAGTGAGTCGGCCATGT...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGACAACTGAATAGGCTTTaGAATCTTTCCAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGQLNRL*NLSSTS
Trigger: AGAAGTGCTGGAAAGATTTCAAAGCCTATTCAGTTG...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp TCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTAAAAATCAATTCAAAAGTCTCTaGCCTGCAGCGAAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SYHWSRPINGSQAAFAKNQFKSL*PAAKCR
Trigger: CCTGCACTTCGCTGCAGGTCAGAGACTTTTGAATTG...ATTTTTAGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR TCA 90 bp TGTTTCTCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTGTACTGTGCAACCACTaGAGAATTCCTTGGATTCAC +
Preference number: 4 (lower is better)
Translates to: CFSYHWSRPINGSQAAFAVLCNH*RIPWIH
Trigger: GTGAATCCAAGGAATTCTTCAGTGGTTGCACAGTAC...AGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGGGTCAGCTCCGTGCTaGAGCAGCACAATGCACACA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAGSAPC*SSTMHT
Trigger: TGTGTGCATTGTGCTGCTGCAGCACGGAGCTGACCC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCCTTTCGGCTGCAACATaGAGGGGAGTCATGAAATCT +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLLSAAT*RGVMKS
Trigger: AGATTTCATGACTCCCCTGCATGTTGCAGCCGAAAG...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGACAGGTTATTATAGCCTaGTGCCAGGTGCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: ASCSRIVVFECICFPYARQVIIA*CQVQRG
Trigger: ACCCCTCTGCACCTGGCAGCAGGCTATAATAACCTG...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCTAGGTCTTCTGCTCTaGGGCTGTTGCGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALGLLL*GCCGLG
Trigger: TCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
CDS-3UTR GCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTGCCAGAAGCTTGGGTTaGACTGCTAATGATTTTGTC +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSARSLG*TANDFV
Trigger: GACAAAATCATTAGCAGTGCAACCCAAGCTTCTGGC...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCACACACCACTTCTGTTTaGAAGGCCATTTACAGGAAT +
Preference number: 4 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSHTTSV*KAIYRN
Trigger: ATTCCTGTAAATGGCCTTGCAAACAGAAGTGGTGTG...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGGAGGAAAAGCCGAAATaGAATCTACAGTGCGAATGT +
Preference number: 4 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGEEKPK*NLQCEC
Trigger: ACATTCGCACTGTAGATTGCATTTCGGCTTTTCCTC...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGAAGTGTTCCGAATGTTTaGGTCAGCTCCGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASCSRIVVFECICFPYARSVPNV*VSSVLQ
Trigger: CTGCAGCACGGAGCTGACCCAAACATTCGGAACACT...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGACCTAAGCTCCGGAGTTaGAGCCATATCCACAGCACT +
Preference number: 4 (lower is better)
Translates to: ASCSRIVVFECICFPYARPKLRS*SHIHST
Trigger: AGTGCTGTGGATATGGCTCCAACTCCGGAGCTTAGG...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTTGGACATCGGCACCGTaGTGTAGCAGGTACTCTACA +
Preference number: 4 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFWTSAP*CSRYST
Trigger: TGTAGAGTACCTGCTACACCACGGTGCCGATGTCCA...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp ATGCATGTCTGGCAAATCAAAAACAAGCTTGTTGCCTGTCGTATGTGTATATTTAGGCCTCTGGGGGCATaGCATCTATCAGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: MHVWQIKNKLVACRMCIFRPLGA*HLSAKL
Trigger: GAGCTTTGCTGATAGATGCCATGCCCCCAGAGGCCT...AAATATACACATACGACAGGCAACAAGCTTGTTTTTGATTTGCCAGACATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp ATGCATGTCTGGCAAATCAAAAACAAGCTTGTTGCCTGTCGTATGTGTATATTTACTTCCTTCTGTCGGTaGCAGAACCGCTCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: MHVWQIKNKLVACRMCIFTSFCR*QNRSLN
Trigger: GTTGAGGGAGCGGTTCTGCCACCGACAGAAGGAAGT...AAATATACACATACGACAGGCAACAAGCTTGTTTTTGATTTGCCAGACATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTGCCCTGGAGGCGCGTaGGCCATTTTCATGGTGCTA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNACPGGA*AIFMVL
Trigger: TAGCACCATGAAAATGGCCCACGCGCCTCCAGGGCA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
CDS-3UTR CCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTGGAGGCAGAACTCTCTaGCAATGTATAAAACTCGTC +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSGGRTL*QCIKLV
Trigger: GACGAGTTTTATACATTGCCAGAGAGTTCTGCCTCC...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAGCCTTGTAAGGAGATaGTGGAGGGGTCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASLVRR*WRGQSR
Trigger: ACGGCTCTGACCCCTCCATCATCTCCTTACAAGGCT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCTGCTAAAGGGCCAGTaGGGTTGTCTATGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALLKGQ*GCLCCW
Trigger: CCAGCAGCATAGACAACCTCACTGGCCCTTTAGCAG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCGTCTTTCTACTCCTTTaGTTAATTTGTGGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLVFLLL*LICGGA
Trigger: GGCACCGCCACAAATTAATCAAAGGAGTAGAAAGAC...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGACATCTCTTCTTCCACTaGCTGATATTCTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGHLFFH*LIFFIF
Trigger: GAAGATAAAGAATATCAGTCAGTGGAAGAAGAGATG...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGATTGTGCTGGTGGTACTaGAACAGCTGGTACCGTCAA +
Preference number: 4 (lower is better)
Translates to: ASCSRIVVFECICFPYARLCWWY*NSWYRQ
Trigger: TTGACGGTACCAGCTGTTGCAGTACCACCAGCACAA...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTGAGTTTTGTAATGAGTACTGTGCAACCACTGAAGAATTCCTTGGATTCACTTCTTTGCATTTACGTTTaGCGCGTCCACCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VSFVMSTVQPLKNSLDSLLCIYV*RVHQPL
Trigger: AAGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAG...AAGTGAATCCAAGGAATTCTTCAGTGGTTGCACAGTACTCATTACAAAACTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTTTGGGTCAGCTCCGTaGTGCAGCAGCACAATGCAC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAFGSAP*CSSTMH
Trigger: GTGCATTGTGCTGCTGCAGCACGGAGCTGACCCAAA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTTTGGAAGCAGCCTCGTaGAGTGGAGTAAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSLEAAS*SGVNCQ
Trigger: CTGGCAGTTTACTCCACTGCACGAGGCTGCTTCCAA...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp ATGCATGTCTGGCAAATCAAAAACAAGCTTGTTGCCTGTCGTATGTGTATATTTCACAGCACAGTGCAGTaGTGTTTCATGAGACTGCGG +
Preference number: 4 (lower is better)
Translates to: MHVWQIKNKLVACRMCIFHSTVQ*CFMRLR
Trigger: CCGCAGTCTCATGAAACAGCACTGCACTGTGCTGTG...AAATATACACATACGACAGGCAACAAGCTTGTTTTTGATTTGCCAGACATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGACAGAATCTGCTGCACTaGTTCATTGCCCATCTGTGC +
Preference number: 4 (lower is better)
Translates to: ASCSRIVVFECICFPYARQNLLH*FIAHLC
Trigger: GCACAGATGGGCAATGAAGCAGTGCAGCAGATTCTG...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTTGTAAGGGCGTGGAATaGCGGCCCTCTAAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSCKGVE*RPSKSL
Trigger: TAGAGACTTAGAGGGCCGGCATTCCACGCCCTTACA...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTCTCATTTAATCATTACAACAAGCTGGAAAGGAGGTCTTGGAATCCAACTTTTGAGGGGTTGAATTTCTaGCCTGGGTGTCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: VSFNHYNKLERRSWNPTFEGLNF*PGCLCS
Trigger: ACTGCAGAGACACCCAGGGCAGAAATTCAACCCCTC...AAAAGTTGGATTCCAAGACCTCCTTTCCAGCTTGTTGTAATGATTAAATGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR GCA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACCCTTCCTTTCTGGGCTaGTTCATGGAGGGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: SKTHLTATENYTDGNFFNPSFLG*FMEGSK
Trigger: TTTACTCCCCTCCATGAAGCAGCCCAGAAAGGAAGG...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCCATTCCTCCTATGTATaGATGTCGCTCATCAAACCC +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLHSSYV*MSLIKP
Trigger: GGGTTTGATGAGCGACATGCATACATAGGAGGAATG...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTGTCAGCGTGACTTTGTaGAAAATATCCTCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSVSVTL*KISSRR
Trigger: CCTTCTTGAGGATATTTTGCACAAAGTCACGCTGAC...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACTGGATCCATTGGGGCTaGCATGATACAGAACCACAC +
Preference number: 4 (lower is better)
Translates to: SKTHLTATENYTDGNFFNWIHWG*HDTEPH
Trigger: GTGTGGTTCTGTATCATGGCAGCCCCAATGGATCCA...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTAGCAGCCTCGTGCAGTaGAGTAAACTGCCAGAGATC +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSSSLVQ*SKLPEI
Trigger: GATCTCTGGCAGTTTACTCCACTGCACGAGGCTGCT...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp AATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAGTTTCAGTGTTTTGTGTCCAGTGCATTCATCTTaGCGCCATGCTTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: NGSRSRCYMHMKSFSVLCPVHSS*RHAYAE
Trigger: TTCTGCATAAGCATGGCGCCAAGATGAATGCACTGG...ACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCGAAGTGTAAGGGCGTaGAATGCCGGCCCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARSVRA*NAGPLS
Trigger: ACTTAGAGGGCCGGCATTCCACGCCCTTACACTTCG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCCTTGTCTTTGGCATaGACATCGGCACCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPLSLA*TSAPWC
Trigger: ACACCACGGTGCCGATGTCCATGCCAAAGACAAGGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCAGGCAGCCCTTCTTaGCAGCATCCAACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPGSPS*QHPTKQ
Trigger: CTGCTTTGTTGGATGCTGCCAAGAAGGGCTGCCTGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTTCTGGGCTGCTTCATaGAGGGGAGTAAACGCCCAC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAFWAAS*RGVNAH
Trigger: GTGGGCGTTTACTCCCCTCCATGAAGCAGCCCAGAA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp TTACACACGTGTTGTATTTTATCAATAAAGCCGCTATGTCAACATGCTTGCATTTTCTGGGCTGCTTCATaGAGGGGAGTAAACGCCCAC +
Preference number: 4 (lower is better)
Translates to: LHTCCILSIKPLCQHACIFWAAS*RGVNAH
Trigger: GTGGGCGTTTACTCCCCTCCATGAAGCAGCCCAGAA...AATGCAAGCATGTTGACATAGCGGCTTTATTGATAAAATACAACACGTGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTGCGTCCTTCCTTTCTaGGCTGCTTCATGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNACVLPF*AASWRG
Trigger: TCCCCTCCATGAAGCAGCCCAGAAAGGAAGGACGCA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCTGGTTCTTCATGGTaGGGTCTGCACCATGCGCTA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPGSSW*GLHHAL
Trigger: TAGCGCATGGTGCAGACCCCACCATGAAGAACCAGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCTTCCTGGTTCTTCATaGTGGGGTCTGCACCATGCG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALPGSS*WGLHHA
Trigger: CGCATGGTGCAGACCCCACCATGAAGAACCAGGAAG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAGGCCTCTGGGGGCATaGCATCTATCAGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARPLGA*HLSAKL
Trigger: GAGCTTTGCTGATAGATGCCATGCCCCCAGAGGCCT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTACTTCCTTCTGTCGGTaGCAGAACCGCTCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNATSFCR*QNRSLN
Trigger: GTTGAGGGAGCGGTTCTGCCACCGACAGAAGGAAGT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTCACAGTACCTTCACCTaGCACACAGAGCATGAGACG +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSHSTFT*HTEHET
Trigger: CGTCTCATGCTCTGTGTGCCAGGTGAAGGTACTGTG...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGATTAAAAAGGCGGGGGTaGGGACAATGCCCAATAACC +
Preference number: 4 (lower is better)
Translates to: ASCSRIVVFECICFPYARLKRRG*GQCPIT
Trigger: GGTTATTGGGCATTGTCCCCACCCCCGCCTTTTTAA...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTTTTCATCCTGAACTTTaGGAGGGGTGCGCGGGTGTG +
Preference number: 4 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTIFHPEL*EGCAGV
Trigger: CACACCCGCGCACCCCTCCCAAAGTTCAGGATGAAA...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTCTTGATGCCCTCCTTTaGAAAGAAGTGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFLDALL*KEVEGE
Trigger: CTCACCCTCCACTTCTTTCCAAAGGAGGGCATCAAG...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 72 bp TTGGGTTGCACTGCTAATGATTTTGTCAGCGTGACTTaGTGCAAAATATCCTCAAGAAGGCTCTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: LGCTANDFVSVT*CKISSRRLWLI
Trigger: AATGAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATTAGCAGTGCAACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTGGATGGAGAGGAAGATaGGGAAGAAGTCGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTIGWRGR*GRSRGR
Trigger: TCTTCCCCGACTTCTTCCTCATCTTCCTCTCCATCC...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCTATGCAAAGCAGTCTaGCCAAGGGTGTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALCKAV*PRVSSA
Trigger: TGCACTGGACACCCTTGGTCAGACTGCTTTGCATAG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTCTATCAGCAAAGCTCTaGTATCGTCAGCTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFLSAKL*YRQLLP
Trigger: TGGCAACAGCTGACGATATCAGAGCTTTGCTGATAG...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCACCCTCAACTTCTTGTTaGCAACTTTTTGAATTCGAA +
Preference number: 4 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSPSTSC*QLFEFE
Trigger: TTCGAATTCAAAAAGTTGTCAACAAGAAGTTGAGGG...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCATGAAAGGAGAACCATaGAACAACATGCGCTCATTG +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLMKGEP*NNMRSL
Trigger: CAATGAGCGCATGTTGTTTCATGGTTCTCCTTTCAT...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTACAAACAATAGCCAATaGTGCATGTCTGGCAAATCA +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSTNNSQ*CMSGKS
Trigger: TGATTTGCCAGACATGCATCATTGGCTATTGTTTGT...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCTCGTTTTCAGGGCTTTaGATTGCAATGGCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLSFSGL*IAMASL
Trigger: CAAACTTGCCATTGCAATTCAAAGCCCTGAAAACGA...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGACCCAGCTTGGGTCACTaGAACTTCAAAAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: ASCSRIVVFECICFPYARPSLGH*NFKRSN
Trigger: GTTGCTTCTTTTGAAGTTTCAGTGACCCAAGCTGGG...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTCTTTGCATTTACGTTTaGCGCGTCCACCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSLCIYV*RVHQPL
Trigger: AAGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAG...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTTGGAAGCAGCCTCGTaGAGTGGAGTAAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALEAAS*SGVNCQ
Trigger: CTGGCAGTTTACTCCACTGCACGAGGCTGCTTCCAA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCACAGCACAGTGCAGTaGTGTTTCATGAGACTGCGG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAHSTVQ*CFMRLR
Trigger: CCGCAGTCTCATGAAACAGCACTGCACTGTGCTGTG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTATGGGCTCTTTCGGCTaGAACATGCAGGGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAMGSFG*NMQGSH
Trigger: ATGACTCCCCTGCATGTTGCAGCCGAAAGAGCCCAT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTACCAAGGGTGTCCAGTaGATTCATCTTGGCGCCATG +
Preference number: 4 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTITKGVQ*IHLGAM
Trigger: CATGGCGCCAAGATGAATGCACTGGACACCCTTGGT...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTACCAAGGGTGTCCAGTaGATTCATCTTGGCGCCATG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNATKGVQ*IHLGAM
Trigger: CATGGCGCCAAGATGAATGCACTGGACACCCTTGGT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAACTCTCACTCAGAATCTaGTGCACTGCTTCATTGCCC +
Preference number: 4 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKELSLRI*CTASLP
Trigger: GGGCAATGAAGCAGTGCAGCAGATTCTGAGTGAGAG...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTGTAAGGGCGTGGAATaGCGGCCCTCTAAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNACKGVE*RPSKSL
Trigger: TAGAGACTTAGAGGGCCGGCATTCCACGCCCTTACA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp AATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAGTTTCAGTGTTTTGTGTATACTTTCCTTTAGCTaGTGCTTCATGGAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NGSRSRCYMHMKSFSVLCILSFS*CFMERG
Trigger: ACCCCTCTCCATGAAGCAGCAGCTAAAGGAAAGTAT...ACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGAGGGGTTGAATTTCTaGCCTGGGTGTCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAEGLNF*PGCLCS
Trigger: ACTGCAGAGACACCCAGGGCAGAAATTCAACCCCTC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCAGGTTATTATAGCCTaGTGCCAGGTGCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAQVIIA*CQVQRG
Trigger: ACCCCTCTGCACCTGGCAGCAGGCTATAATAACCTG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GCATTTACACACGTGTTGTATTTTATCAATAAAGCCGCTATGTCAACATGCTTGCCTTCCTTTCTGGGCTaGTTCATGGAGGGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: AFTHVLYFINKAAMSTCLPSFLG*FMEGSK
Trigger: TTTACTCCCCTCCATGAAGCAGCCCAGAAAGGAAGG...CAAGCATGTTGACATAGCGGCTTTATTGATAAAATACAACACGTGTGTAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGATATCGTCAGCTGTTaGCAGATCCAGAGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNADIVSC*QIQRRL
Trigger: CAGACGCCTCTGGATCTGGCAACAGCTGACGATATC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGACAAAAACAAGCTTGTTaGCTGTCGTATGTGTATATT +
Preference number: 4 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRQKQAC*LSYVYI
Trigger: AATATACACATACGACAGGCAACAAGCTTGTTTTTG...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAAAGATACTCTGGGTATaGATCATGTATTTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSKILWV*IMYFWL
Trigger: CAGCCAAAAATACATGATGCATACCCAGAGTATCTT...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAGTGTTCCGAATGTTTaGGTCAGCTCCGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASVPNV*VSSVLQ
Trigger: CTGCAGCACGGAGCTGACCCAAACATTCGGAACACT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAGCAGCCTCGTGCAGTaGAGTAAACTGCCAGAGATC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASSLVQ*SKLPEI
Trigger: GATCTCTGGCAGTTTACTCCACTGCACGAGGCTGCT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCTAAGCTCCGGAGTTaGAGCCATATCCACAGCACT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPKLRS*SHIHST
Trigger: AGTGCTGTGGATATGGCTCCAACTCCGGAGCTTAGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTGGACATCGGCACCGTaGTGTAGCAGGTACTCTACA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAWTSAP*CSRYST
Trigger: TGTAGAGTACCTGCTACACCACGGTGCCGATGTCCA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAGATCCAGAGGCGTCTaGCCTTCCTGGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARSRGV*PSWFFM
Trigger: CATGAAGAACCAGGAAGGCCAGACGCCTCTGGATCT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCAGTGATAAGATACTCTaGGTATGCCTGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLSDKIL*VCLFSS
Trigger: AGAGGAGAACAGGCATACCCAGAGTATCTTATCACT...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGTGGCAGGCTTGTGTTaGAAAGAGCAAGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAVAGLC*KEQVAF
Trigger: GAAGGCCACTTGCTCTTTCCAACACAAGCCTGCCAC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACCAACAGCAGGTAAACTaGAACCATCAGGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SKTHLTATENYTDGNFFNQQQVN*NHQVWR
Trigger: TCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTG...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 72 bp TTAAACTACGTCTGGGGGAAGGTAAGTAAGACACACTaGACAGCTACTGAAAACTACACAGATGGCAATTTC +
Preference number: 4 (lower is better)
Translates to: LNYVWGKVSKTH*TATENYTDGNF
Trigger: GAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACTTACCTTCCCCCAGACGTAGTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 72 bp AAGGAAAACAAGAATCCTGGTTGCACTGCTGTTATTTaGCATCGAATCAAAACTCTGGGTTCCATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: KENKNPGCTAVI*HRIKTLGSMLS
Trigger: TGACAGCATGGAACCCAGAGTTTTGATTCGATGCAAAATAACAGCAGTGCAACCAGGATTCTTGTTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 72 bp ATCCTCAAACATGTGTTGGGTTGTATTAAACCTCTTTaGGTCTGGACTGTCCTCAAAGGACATACCCTTGTA +
Preference number: 4 (lower is better)
Translates to: ILKHVLGCIKPL*VWTVLKGHTLV
Trigger: TACAAGGGTATGTCCTTTGAGGACAGTCCAGACCAAAAGAGGTTTAATACAACCCAACACATGTTTGAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR TCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTAAAGAACAGGCATTATaGAGCGGGATGAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSKEQAL*SGMRPP
Trigger: TGGAGGTCTCATCCCGCTTCATAATGCCTGTTCTTT...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTTGCAGTGCTGTTTCATaGGACTGCGGTTGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFCSAVS*DCGCLK
Trigger: TTTCAAACAACCGCAGTCTCATGAAACAGCACTGCA...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTATAAGTCCGCCACATTaGCAGAAGCCCCATGCCTTA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAISPPH*QKPHAL
Trigger: TAAGGCATGGGGCTTCTGTCAATGTGGCGGACTTAT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTCTCACTACAGTAGCCTaGGGTTTAAAACAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFLTTVA*GLKQVG
Trigger: ACCTACCTGTTTTAAACCTCAGGCTACTGTAGTGAG...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp ATATATCCATATGCAGAGACTACCAACTACAGTGAGTTTTGTAATGAGTACTGTTTGTGCTGGTGGTACTaGAACAGCTGGTACCGTCAA +
Preference number: 4 (lower is better)
Translates to: IYPYAETTNYSEFCNEYCLCWWY*NSWYRQ
Trigger: TTGACGGTACCAGCTGTTGCAGTACCACCAGCACAA...ACAGTACTCATTACAAAACTCACTGTAGTTGGTAGTCTCTGCATATGGATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGCTGCAGCAGCACAATaGACACATCGATCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAAAAAQ*THRSSL
Trigger: AAGGGAAGATCGATGTGTGCATTGTGCTGCTGCAGC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTGTTTACGTTTGGGATaGAGAGAGGCCACAGCACAG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNACLRLG*REATAQ
Trigger: CTGTGCTGTGGCCTCTCTGCATCCCAAACGTAAACA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCAGAATCTGCTGCACTaGTTCATTGCCCATCTGTGC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAQNLLH*FIAHLC
Trigger: GCACAGATGGGCAATGAAGCAGTGCAGCAGATTCTG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCTCTCACTCAGAATCTaGTGCACTGCTTCATTGCCC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALSLRI*CTASLP
Trigger: GGGCAATGAAGCAGTGCAGCAGATTCTGAGTGAGAG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCTTCCTTTCTGGGCTaGTTCATGGAGGGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPSFLG*FMEGSK
Trigger: TTTACTCCCCTCCATGAAGCAGCCCAGAAAGGAAGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGACATATTCAGCATATaGCAGCCCATTGACGCTCGG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNADIFSI*QPIDAR
Trigger: CCGAGCGTCAATGGGCTGGCATATGCTGAATATGTC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
CDS-3UTR GCA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAAGTGGAAACTGAATCTTaGTCAGCCAGAAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKEVETES*SARSLG
Trigger: ACCCAAGCTTCTGGCTGAGCAAGATTCAGTTTCCAC...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTCAACTGCATTTCTCTaGAAACACTCTGAATCAACA +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSSTAFL*KHSEST
Trigger: TGTTGATTCAGAGTGTTTGCAGAGAAATGCAGTTGA...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACCTACCAGGGTTCAACTaGATTTCTCTGCAAACACTC +
Preference number: 4 (lower is better)
Translates to: SKTHLTATENYTDGNFFNLPGFN*ISLQTL
Trigger: GAGTGTTTGCAGAGAAATGCAGTTGAACCCTGGTAG...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GCCTCATGTTCTAGAATAGTAGTTTTCGAGTGCATTTGCTTTCCATATGCTAGAAGTTCCAGTTATCCCTaGCATTTGGATCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ASCSRIVVFECICFPYARSSSYP*HLDQLL
Trigger: AAGGAGCTGATCCAAATGCCAGGGATAACTGGAACT...TCTAGCATATGGAAAGCAAATGCACTCGAAAACTACTATTCTAGAACATGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTTCACTTGTTTACGTTTaGGATGCAGAGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSSLVYV*DAERPQ
Trigger: CTGTGGCCTCTCTGCATCCCAAACGTAAACAAGTGA...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACTCCATGACATCATTATaGGCTCTTTCGGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: SKTHLTATENYTDGNFFNSMTSL*ALSAAT
Trigger: TGTTGCAGCCGAAAGAGCCCATAATGATGTCATGGA...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GCATTTACACACGTGTTGTATTTTATCAATAAAGCCGCTATGTCAACATGCTTGGCAGTTGATATTCTCTaGGGTACAGAGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: AFTHVLYFINKAAMSTCLAVDIL*GTELLH
Trigger: GTGCAGAAGCTCTGTACCCCAGAGAATATCAACTGC...CAAGCATGTTGACATAGCGGCTTTATTGATAAAATACAACACGTGTGTAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCTGGGAAGGGGCTTCTaGCTTCATGATCTGGTAAGT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALGRGF*LHDLVS
Trigger: ACTTACCAGATCATGAAGCCAGAAGCCCCTTCCCAG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
CDS-3UTR CCA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACAAAGAGTCACTACACTaGTTGCTCACACAGACCAAC +
Preference number: 4 (lower is better)
Translates to: SKTHLTATENYTDGNFFNKESLH*LLTQTN
Trigger: GTTGGTCTGTGTGAGCAACCAGTGTAGTGACTCTTT...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAAAGAACAGGCATTATaGAGCGGGATGAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAKEQAL*SGMRPP
Trigger: TGGAGGTCTCATCCCGCTTCATAATGCCTGTTCTTT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCTCTCAGTAAGTCCTaGATATCTGTGTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPLSKS*ISVSPS
Trigger: GGAAGGAGACACAGATATTCAGGACTTACTGAGAGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCTATCAGCAAAGCTCTaGTATCGTCAGCTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALSAKL*YRQLLP
Trigger: TGGCAACAGCTGACGATATCAGAGCTTTGCTGATAG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCCAGAAATGGGTAGACTaGTGTAAAAGAAATCACAGA +
Preference number: 4 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLQKWVD*CKRNHR
Trigger: TCTGTGATTTCTTTTACATCAGTCTACCCATTTCTG...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCTTTCGGCTGCAACATaGAGGGGAGTCATGAAATCT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALSAAT*RGVMKS
Trigger: AGATTTCATGACTCCCCTGCATGTTGCAGCCGAAAG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTTTGGCGCCATGCTTATaGAGAACTTCCATGACATCA +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSLAPCL*RTSMTS
Trigger: TGATGTCATGGAAGTTCTGCATAAGCATGGCGCCAA...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCACTCAGAATCTGCTaGACTGCTTCATTGCCCATC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASLRIC*TASLPI
Trigger: GATGGGCAATGAAGCAGTGCAGCAGATTCTGAGTGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTTTGACAGAAGCCCCATaGCTTACTAAAAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTILTEAP*LTKSSA
Trigger: GGCTGAGCTTTTAGTAAGGCATGGGGCTTCTGTCAA...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTTGACAGAAGCCCCATaGCTTACTAAAAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALTEAP*LTKSSA
Trigger: GGCTGAGCTTTTAGTAAGGCATGGGGCTTCTGTCAA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTATTAATTTGTGGCGGTaGCCATATGCATTGATGCCT +
Preference number: 4 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFINLWR*PYALMP
Trigger: AGGCATCAATGCATATGGGCACCGCCACAAATTAAT...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGTTATCCCTGGCATTTaGATCAGCTCCTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAVIPGI*ISSLAQ
Trigger: TTGTGCCAAGGAGCTGATCCAAATGCCAGGGATAAC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp ATGCATGTCTGGCAAATCAAAAACAAGCTTGTTGCCTGTCGTATGTGTATATTTCGCCCATCACTTGCATaGCAATTCACATTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: MHVWQIKNKLVACRMCIFRPSLA*QFTFRG
Trigger: TCCTCTAAATGTGAATTGCCATGCAAGTGATGGGCG...AAATATACACATACGACAGGCAACAAGCTTGTTTTTGATTTGCCAGACATGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCACTTGTTTACGTTTaGGATGCAGAGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASLVYV*DAERPQ
Trigger: CTGTGGCCTCTCTGCATCCCAAACGTAAACAAGTGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCAGTGCATTCATCTTaGCGCCATGCTTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPVHSS*RHAYAE
Trigger: TTCTGCATAAGCATGGCGCCAAGATGAATGCACTGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGCAGTTGATATTCTCTaGGGTACAGAGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAAVDIL*GTELLH
Trigger: GTGCAGAAGCTCTGTACCCCAGAGAATATCAACTGC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTTGCATTTACACACGTGTTGTATTTTATCAATAAAGCCGCTATGTCAACATGCGTTGAATTTCTGCCCTaGGTGTCTCTGCAGTTGATA +
Preference number: 4 (lower is better)
Translates to: VAFTHVLYFINKAAMSTCVEFLP*VSLQLI
Trigger: TATCAACTGCAGAGACACCCAGGGCAGAAATTCAAC...GCATGTTGACATAGCGGCTTTATTGATAAAATACAACACGTGTGTAAATGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR CCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTGTTCCTAAGTCAGGTTaGTGTTTGTGCCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSVPKSG*CLCPSL
Trigger: AAGAGAAGGGCACAAACACCAACCTGACTTAGGAAC...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTCTCAAAGCTTCACCTaGAATTCTAGTGCTATTAAA +
Preference number: 4 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSSQSFT*NSSAIK
Trigger: TTTAATAGCACTAGAATTCCAGGTGAAGCTTTGAGA...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACATGAGCTTGAAACAATaGGAGCAGAAGCAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: SKTHLTATENYTDGNFFNMSLKQ*EQKQVL
Trigger: TAACACCTGCTTCTGCTCCCATTGTTTCAAGCTCAT...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp TCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTAAAAATCTGACACGAGGTAAATaGTCTGCTAGACAACAAATA +
Preference number: 4 (lower is better)
Translates to: SYHWSRPINGSQAAFAKNLTRGK*SARQQI
Trigger: TATTTGTTGTCTAGCAGACCATTTACCTCGTGTCAG...ATTTTTAGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522110.1
3UTR CAA 72 bp CACAATGAGAAAACACAATTACTACTCCGAGTGCTGTaGCCAGGCAACATAACATTTTCTCAAAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: HNEKTQLLLRVL*PGNITFSQSWF
Trigger: AAACCAGCTTTGAGAAAATGTTATGTTGCCTGGCAACAGCACTCGGAGTAGTAATTGTGTTTTCTCATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAATATGAACATGCATTATaGAGAGGCACAAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKEYEHAL*RGTSPP
Trigger: AGGTGGACTTGTGCCTCTTCATAATGCATGTTCATA...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTGCAGTGCTGTTTCATaGGACTGCGGTTGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNACSAVS*DCGCLK
Trigger: TTTCAAACAACCGCAGTCTCATGAAACAGCACTGCA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCTCACTACAGTAGCCTaGGGTTTAAAACAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALTTVA*GLKQVG
Trigger: ACCTACCTGTTTTAAACCTCAGGCTACTGTAGTGAG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGTCTTTCTACTCCTTTaGTTAATTTGTGGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAVFLLL*LICGGA
Trigger: GGCACCGCCACAAATTAATCAAAGGAGTAGAAAGAC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGTGACATATATAGCATaGCCTGTCCTTGTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAVTYIA*PVLVCR
Trigger: CCTACACACAAGGACAGGTCATGCTATATATGTCAC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCCACTATTCGAGTCTaGATCCCAGCATTCTCAACT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASTIRV*IPAFST
Trigger: AGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAAACACTTGACAGCTACTaGAAACTACACAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKETLDSY*KLHRWQ
Trigger: TTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGT...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp AATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAGTTTCAGTGTTTTGTGTATGCACTTTGTATTTTaGGAGCAAAGGGAAATCAGT +
Preference number: 4 (lower is better)
Translates to: NGSRSRCYMHMKSFSVLCMHFVF*EQREIS
Trigger: ACTGATTTCCCTTTGCTCTCAAAATACAAAGTGCAT...ACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR TCA 90 bp TCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTAAAAATCCACTATTTCCTGACTaGATTTGGACTTATTTAAGC +
Preference number: 4 (lower is better)
Translates to: SYHWSRPINGSQAAFAKNPLFPD*IWTYLS
Trigger: GCTTAAATAAGTCCAAATTCAGTCAGGAAATAGTGG...ATTTTTAGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTTGCAGTGGAGTAAACTaGCAGAGATCCATGGCATTA +
Preference number: 4 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTICSGVN*QRSMAL
Trigger: TAATGCCATGGATCTCTGGCAGTTTACTCCACTGCA...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTGCAGTGGAGTAAACTaGCAGAGATCCATGGCATTA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNACSGVN*QRSMAL
Trigger: TAATGCCATGGATCTCTGGCAGTTTACTCCACTGCA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTTGGCGCCATGCTTATaGAGAACTTCCATGACATCA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALAPCL*RTSMTS
Trigger: TGATGTCATGGAAGTTCTGCATAAGCATGGCGCCAA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTTTCATCTTGGCGCCATaGTTATGCAGAACTTCCATG +
Preference number: 4 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTIFILAP*LCRTSM
Trigger: CATGGAAGTTCTGCATAAGCATGGCGCCAAGATGAA...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTTCATCTTGGCGCCATaGTTATGCAGAACTTCCATG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAFILAP*LCRTSM
Trigger: CATGGAAGTTCTGCATAAGCATGGCGCCAAGATGAA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTATACTTTCCTTTAGCTaGTGCTTCATGGAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAILSFS*CFMERG
Trigger: ACCCCTCTCCATGAAGCAGCAGCTAAAGGAAAGTAT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAACGCCCACTTATCTGTTaGATTTACACACGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKERPLIC*IYTRVV
Trigger: TACAACACGTGTGTAAATGCAACAGATAAGTGGGCG...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGTGGCGGTGCCCATATaGATTGATGCCTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAVAVPI*IDAYFF
Trigger: AAAGAAATAGGCATCAATGCATATGGGCACCGCCAC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCATTCCTCCTATGTATaGATGTCGCTCATCAAACCC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAHSSYV*MSLIKP
Trigger: GGGTTTGATGAGCGACATGCATACATAGGAGGAATG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACGAATCCTGGTTGCACTaGTGTTATTTTGCATCGAAT +
Preference number: 4 (lower is better)
Translates to: SKTHLTATENYTDGNFFNESWLH*CYFASN
Trigger: ATTCGATGCAAAATAACAGCAGTGCAACCAGGATTC...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAATTTGGATCAGCTCCTTaGCACAATAACAGACTCACA +
Preference number: 4 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKEFGSAP*HNNRLT
Trigger: TGTGAGTCTGTTATTGTGCCAAGGAGCTGATCCAAA...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAGTTCCAGTTATCCCTaGCATTTGGATCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASSSYP*HLDQLL
Trigger: AAGGAGCTGATCCAAATGCCAGGGATAACTGGAACT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCGCCCATCACTTGCATaGCAATTCACATTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARPSLA*QFTFRG
Trigger: TCCTCTAAATGTGAATTGCCATGCAAGTGATGGGCG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCCATGACATCATTATaGGCTCTTTCGGCTGCAACA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASMTSL*ALSAAT
Trigger: TGTTGCAGCCGAAAGAGCCCATAATGATGTCATGGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGTTGAATTTCTGCCCTaGGTGTCTCTGCAGTTGATA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAVEFLP*VSLQLI
Trigger: TATCAACTGCAGAGACACCCAGGGCAGAAATTCAAC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAAATAAGGCAGCTAATTTaGAGGGGTAACAATCCCAAC +
Preference number: 4 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKEIRQLI*RGNNPN
Trigger: GTTGGGATTGTTACCCCTCCAAATTAGCTGCCTTAT...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GGGAACTCTACACTTCAATTACTCACAAAAATGAAAAGTGACCTTAATCCAGGGGTATTAAACCTCTTTTaGTCTGGACTGTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GNSTLQLLTKMKSDLNPGVLNLF*SGLSSK
Trigger: CTTTGAGGACAGTCCAGACCAAAAGAGGTTTAATAC...CCCTGGATTAAGGTCACTTTTCATTTTTGTGAGTAATTGAAGTGTAGAGTTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000522110.1
3UTR CAA 72 bp GGAGAGACACTGAAACAGAAAAACCTAGACAACTTATaGCATTCTAATGCCGTTCTCCGGCATATATCAAAA +
Preference number: 4 (lower is better)
Translates to: GETLKQKNLDNL*HSNAVLRHISK
Trigger: TTTTGATATATGCCGGAGAACGGCATTAGAATGCAATAAGTTGTCTAGGTTTTTCTGTTTCAGTGTCTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 72 bp GTAAACGCCCACTTATCTGTTGCATTTACACACGTGTaGTATTTTATCAATAAAGCCGCTATGTCAACATGC +
Preference number: 4 (lower is better)
Translates to: VNAHLSVAFTHV*YFINKAAMSTC
Trigger: GCATGTTGACATAGCGGCTTTATTGATAAAATACAACACGTGTGTAAATGCAACAGATAAGTGGGCGTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTATGAACATGCATTATaGAGAGGCACAAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAYEHAL*RGTSPP
Trigger: AGGTGGACTTGTGCCTCTTCATAATGCATGTTCATA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCTTTCAACTCTTCATaGCCCATATCAGCCAACACA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASFNSS*PISANT
Trigger: TGTGTTGGCTGATATGGGTCATGAAGAGTTGAAAGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTATGAAAGGAGAACCATaGAACAACATGCGCTCATTG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAMKGEP*NNMRSL
Trigger: CAATGAGCGCATGTTGTTTCATGGTTCTCCTTTCAT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GGGAACTCTACACTTCAATTACTCACAAAAATGAAAAGTGACCTTAATCCAGGGAGAAGACACGTGATTTaGGAAACAAGCACTATTTTG +
Preference number: 4 (lower is better)
Translates to: GNSTLQLLTKMKSDLNPGRRHVI*ETSTIL
Trigger: CAAAATAGTGCTTGTTTCTCAAATCACGTGTCTTCT...CCCTGGATTAAGGTCACTTTTCATTTTTGTGAGTAATTGAAGTGTAGAGTTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTTCCACCTTTGTCTTTTaGATGAACATCAGCACCATG +
Preference number: 4 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTISTFVF*MNISTM
Trigger: CATGGTGCTGATGTTCATGCAAAAGACAAAGGTGGA...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCCACCTTTGTCTTTTaGATGAACATCAGCACCATG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASTFVF*MNISTM
Trigger: CATGGTGCTGATGTTCATGCAAAAGACAAAGGTGGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp ATGCATGTCTGGCAAATCAAAAACAAGCTTGTTGCCTGTCGTATGTGTATATTTTTAACACAAGCTCCATaGTTTAGTAGCAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: MHVWQIKNKLVACRMCIFLTQAP*FSSSSV
Trigger: CACAGAACTGCTACTAAAGCATGGAGCTTGTGTTAA...AAATATACACATACGACAGGCAACAAGCTTGTTTTTGATTTGCCAGACATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCGCCCACTTATCTGTTaGATTTACACACGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARPLIC*IYTRVV
Trigger: TACAACACGTGTGTAAATGCAACAGATAAGTGGGCG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTATTAATTTGTGGCGGTaGCCATATGCATTGATGCCT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAINLWR*PYALMP
Trigger: AGGCATCAATGCATATGGGCACCGCCACAAATTAAT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTTCTCGAATAGTACTTTaGATCTCTTCTTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: YPLFESESQHSQLKKQSSSRIVL*ISSSTD
Trigger: GTCAGTGGAAGAAGAGATGCAAAGTACTATTCGAGA...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTTCATGGTGCTAAACTaGAGAAAGGATTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAFMVLN*RKDFPR
Trigger: CCTTGGGAAATCCTTTCTGCAGTTTAGCACCATGAA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAAGATACTCTGGGTATaGCTGTTCTCCTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAKILWV*LFSSVD
Trigger: ATCTACAGAGGAGAACAGGCATACCCAGAGTATCTT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACGTTTTCGAGTGCATTTaGTTTCCATATGCTAGATGT +
Preference number: 4 (lower is better)
Translates to: SKTHLTATENYTDGNFFNVFECI*FPYARC
Trigger: ACATCTAGCATATGGAAAGCAAATGCACTCGAAAAC...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTTTGGATCAGCTCCTTaGCACAATAACAGACTCACA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAFGSAP*HNNRLT
Trigger: TGTGAGTCTGTTATTGTGCCAAGGAGCTGATCCAAA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCTTTGATTAATTTGTaGCGGTGCCCATATGCATTG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPLINL*RCPYAL
Trigger: CAATGCATATGGGCACCGCCACAAATTAATCAAAGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp ATGCATGTCTGGCAAATCAAAAACAAGCTTGTTGCCTGTCGTATGTGTATATTTAAGTCAAATAAGGATTaGTGCCTTGTTGTCCACCTA +
Preference number: 4 (lower is better)
Translates to: MHVWQIKNKLVACRMCIFKSNKD*CLVVHL
Trigger: TAGGTGGACAACAAGGCACCAATCCTTATTTGACTT...AAATATACACATACGACAGGCAACAAGCTTGTTTTTGATTTGCCAGACATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAGTGATAAGATACTCTaGGTATGCCTGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASDKIL*VCLFSS
Trigger: AGAGGAGAACAGGCATACCCAGAGTATCTTATCACT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp ATATATCCATATGCAGAGACTACCAACTACAGTGAGTTTTGTAATGAGTACTGTAAACCTCTTTTGGTCTaGACTGTCCTCAAAGGACAT +
Preference number: 4 (lower is better)
Translates to: IYPYAETTNYSEFCNEYCKPLLV*TVLKGH
Trigger: ATGTCCTTTGAGGACAGTCCAGACCAAAAGAGGTTT...ACAGTACTCATTACAAAACTCACTGTAGTTGGTAGTCTCTGCATATGGATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CCA 90 bp AATTCACACTTTTTGAGGGAGAACTTTGTGCCAGATACTTCTCACCAAATGCTCTCCTCAAACATGTGTTaGGTTGTATTAAACCTCTTT +
Preference number: 4 (lower is better)
Translates to: NSHFLRENFVPDTSHQMLSSNMC*VVLNLF
Trigger: AAAGAGGTTTAATACAACCCAACACATGTTTGAGGA...GAGCATTTGGTGAGAAGTATCTGGCACAAAGTTCTCCCTCAAAAAGTGTGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522110.1
3UTR CAA 72 bp AAATATTCTTCTCCAGTTGTTTCACATTGGCATATTTaGGTCTCCCCGTCTAGACTGCAAACTTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: KYSSPVVSHWHI*VSPSRLQTSLE
Trigger: TTCTAAAGAAGTTTGCAGTCTAGACGGGGAGACCAAAATATGCCAATGTGAAACAACTGGAGAAGAATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTATGCAGAACTTCCATaGCATCATTATGGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAYAELP*HHYGLF
Trigger: AAAGAGCCCATAATGATGTCATGGAAGTTCTGCATA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp ATGCATGTCTGGCAAATCAAAAACAAGCTTGTTGCCTGTCGTATGTGTATATTTGGTGTTATATGCACATaGAGAGTTTCAGTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: MHVWQIKNKLVACRMCIFGVICT*RVSVFC
Trigger: ACAAAACACTGAAACTCTTCATGTGCATATAACACC...AAATATACACATACGACAGGCAACAAGCTTGTTTTTGATTTGCCAGACATGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTTAACACAAGCTCCATaGTTTAGTAGCAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALTQAP*FSSSSV
Trigger: CACAGAACTGCTACTAAAGCATGGAGCTTGTGTTAA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCTCGAATAGTACTTTaGATCTCTTCTTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASRIVL*ISSSTD
Trigger: GTCAGTGGAAGAAGAGATGCAAAGTACTATTCGAGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTGCACTGCTGTTATTTTaGATCGAATCAAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTIALLLF*IESKLW
Trigger: CCAGAGTTTTGATTCGATGCAAAATAACAGCAGTGC...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAAAACAAGAATCCTGGTTaGACTGCTGTTATTTTGCAT +
Preference number: 4 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKENKNPG*TAVILH
Trigger: ATGCAAAATAACAGCAGTGCAACCAGGATTCTTGTT...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR GCA 90 bp ATGCAATTTCCACATGCATGGTCTCATTTAATCATTACAACAAGCTGGAAAGGATTACTACCCATAAGATaGCGCATTATGAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: MQFPHAWSHLIITTSWKGLLPIR*RIMKRN
Trigger: ATTCCTCTTCATAATGCGGCATCTTATGGGTAGTAA...TCCTTTCCAGCTTGTTGTAATGATTAAATGAGACCATGCATGTGGAAATTGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR GCA 90 bp GGGAACTCTACACTTCAATTACTCACAAAAATGAAAAGTGACCTTAATCCAGGGATACTTCTCACCAAATaGTCGCACAACATCATTTTA +
Preference number: 4 (lower is better)
Translates to: GNSTLQLLTKMKSDLNPGILLTK*SHNIIL
Trigger: TAAAATGATGTTGTGCGAGCATTTGGTGAGAAGTAT...CCCTGGATTAAGGTCACTTTTCATTTTTGTGAGTAATTGAAGTGTAGAGTTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR GCA 90 bp GTGAGTTTTGTAATGAGTACTGTGCAACCACTGAAGAATTCCTTGGATTCACTTACTTGGAATAAAGTATaGAAAAGTAGACACCTCTGT +
Preference number: 4 (lower is better)
Translates to: VSFVMSTVQPLKNSLDSLTWNKV*KSRHLC
Trigger: ACAGAGGTGTCTACTTTTGCATACTTTATTCCAAGT...AAGTGAATCCAAGGAATTCTTCAGTGGTTGCACAGTACTCATTACAAAACTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCTAAGTCTGCTTCTCTaGCTGCTTGTAGTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALSLLL*LLVVKN
Trigger: ATTCTTTACTACAAGCAGCCAGAGAAGCAGACTTAG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAAGTCAAATAAGGATTaGTGCCTTGTTGTCCACCTA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAKSNKD*CLVVHL
Trigger: TAGGTGGACAACAAGGCACCAATCCTTATTTGACTT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCTTCTTCCACTGACTaGTATTCTTTATCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASSSTD*YSLSSG
Trigger: TCCAGAAGATAAAGAATATCAGTCAGTGGAAGAAGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCATCTCTTCTTCCACTaGCTGATATTCTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAHLFFH*LIFFIF
Trigger: GAAGATAAAGAATATCAGTCAGTGGAAGAAGAGATG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR TCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCCTCAACTTCTTGTTaGCAACTTTTTGAATTCGAA +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPSTSC*QLFEFE
Trigger: TTCGAATTCAAAAAGTTGTCAACAAGAAGTTGAGGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR GCA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCACATTTTGAGAGCTaGAAAGTTGCTTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASHFES*KVASQF
Trigger: AAACTGTGAAGCAACTTTGCAGCTCTCAAAATGTGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CCA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTGAACAATCTGAATTCTaGAACGTGAAAGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTIEQSEF*NVKETS
Trigger: AGAGGTTTCTTTCACGTTCCAGAATTCAGATTGTTC...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
3UTR CAA 72 bp AAAGTGACCTTAATCCAGGGTTCTGACAGTTTAAGTTaGATTTCACAAGCTCTAAAATCAAACTGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: KVTLIQGSDSLS*ISQALKSNCLN
Trigger: ATTCAGGCAGTTTGATTTTAGAGCTTGTGAAATCAAACTTAAACTGTCAGAACCCTGGATTAAGGTCACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CCA 90 bp ATATATCCATATGCAGAGACTACCAACTACAGTGAGTTTTGTAATGAGTACTGTACTTCTCCCAAAAATTaGGAACTCTACACTTCAATT +
Preference number: 4 (lower is better)
Translates to: IYPYAETTNYSEFCNEYCTSPKN*ELYTSI
Trigger: AATTGAAGTGTAGAGTTCCCAATTTTTGGGAGAAGT...ACAGTACTCATTACAAAACTCACTGTAGTTGGTAGTCTCTGCATATGGATATAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS CCA 90 bp CCGCTGGGACCACGGGAGCGGCGGCGACGGTACAGATTGTGCTGGTaGTACTGCAACAGCTGGTACCGTCAACCGGGTCCGGGGATCGGG +
Preference number: 5 (lower is better)
Translates to: PLGPRERRRRYRLCW*YCNSWYRQPGPGIG
Trigger: CCCGATCCCCGGACCCGGTTGACGGTACCAGCTGTTGCAGTACCACCAGCACAATCTGTACCGTCGCCGCCGCTCCCGTGGTCCCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS TCA 90 bp GTTACTGCCACTGCCGGCTGGGTTGGGAGCGACCCCAGCGGCAGATaGAGTAGAAACCGCTGGGACCACGGGAGCGGCGGCGACGGTACA +
Preference number: 5 (lower is better)
Translates to: VTATAGWVGSDPSGR*SRNRWDHGSGGDGT
Trigger: TGTACCGTCGCCGCCGCTCCCGTGGTCCCAGCGGTTTCTACTTCATCTGCCGCTGGGGTCGCTCCCAACCCAGCCGGCAGTGGCAGTAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS CCA 90 bp GAGCGGCGGCGACGGTACAGATTGTGCTGGTGGTACTGCAACAGCTaGTACCGTCAACCGGGTCCGGGGATCGGGGCCTGTCGGGCGGAT +
Preference number: 5 (lower is better)
Translates to: ERRRRYRLCWWYCNS*YRQPGPGIGACRAD
Trigger: ATCCGCCCGACAGGCCCCGATCCCCGGACCCGGTTGACGGTACCAGCTGTTGCAGTACCACCAGCACAATCTGTACCGTCGCCGCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS CCA 90 bp AAACCGCTGGGACCACGGGAGCGGCGGCGACGGTACAGATTGTGCTaGTGGTACTGCAACAGCTGGTACCGTCAACCGGGTCCGGGGATC +
Preference number: 5 (lower is better)
Translates to: KPLGPRERRRRYRLC*WYCNSWYRQPGPGI
Trigger: GATCCCCGGACCCGGTTGACGGTACCAGCTGTTGCAGTACCACCAGCACAATCTGTACCGTCGCCGCCGCTCCCGTGGTCCCAGCGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS TCA 90 bp CTGCATTGGAGGCTCCTCCTACGGCCAACTCTGCTAAAGGGCCAGTaGGGTTGTCTATGCTGCTGGCAGCCGAGAGGCAGGAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: LHWRLLLRPTLLKGQ*GCLCCWQPRGRRGW
Trigger: CCACCCCCTCCTGCCTCTCGGCTGCCAGCAGCATAGACAACCTCACTGGCCCTTTAGCAGAGTTGGCCGTAGGAGGAGCCTCCAATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS-3UTR CAA 90 bp GCACCATGCGCTAGGAGGAGGGCGCACAGCTGCGTCCTTCCTTTCTGGGCTGCTCCAGGTGCAGAGGGGTaGAATTTCTGCCCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: APCARRRAHSCVLPFWAAPGAEG*NFCPGC
Trigger: ACACCCAGGGCAGAAATTCAACCCCTCTGCACCTGG...AGCAGCCCAGAAAGGAAGGACGCAGCTGTGCGCCCTCCTCCTAGCGCATGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR CAA 90 bp CACCAGCAGGCATTCACTAGGTCTTCTGCTCTGCGGCTGTTGCGGTCTGGGAAGTCTGCTCTGCGGCTGTaGCGGTCTGGGAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: HQQAFTRSSALRLLRSGKSALRL*RSGKGL
Trigger: AAGCCCCTTCCCAGACCGCAACAGCCGCAGAGCAGA...CTTCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAGTGAATGCCTGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS GCA 90 bp TGCAGCGAAGTGCAGGGGAGAAGACTTCCGGCCGGCCATGTCCTTTaGATTTACGTTTGCCGCGTCCACCAGCCTCTTTACCCGGGACAC +
Preference number: 5 (lower is better)
Translates to: CSEVQGRRLPAGHVL*IYVCRVHQPLYPGH
Trigger: GTGTCCCGGGTAAAGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAGGACATGGCCGGCCGGAAGTCTTCTCCCCTGCACTTCGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS TCA 90 bp GTATTCACCCCGCTGGGTGATGGAGCCGTGACGTTAGCCAGCTTGTaGAGGCAGCATCACCAGTGCCTTGGAGACGGGCAGCAAATTGAC +
Preference number: 5 (lower is better)
Translates to: VFTPLGDGAVTLASL*RQHHQCLGDGQQID
Trigger: GTCAATTTGCTGCCCGTCTCCAAGGCACTGGTGATGCTGCCTTCACAAGCTGGCTAACGTCACGGCTCCATCACCCAGCGGGGTGAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519392.5
CDS-3UTR CAA 90 bp CACCATGCGCTAGGAGGAGGGCGCACAGCTGCGTCCTTCCTTTCTGGGCTGCTTTGGGTGTCTCTGCAGTaGATATTCTCTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: HHALGGGRTAASFLSGLLWVSLQ*IFSGVQ
Trigger: CTGTACCCCAGAGAATATCAACTGCAGAGACACCCA...AAGCAGCCCAGAAAGGAAGGACGCAGCTGTGCGCCCTCCTCCTAGCGCATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR CAA 90 bp CTTCACCAGCAGGCATTCACTAGGTCTTCTGCTCTGCGGCTGTTGCGGTCTGGGGCATATGCCAGCCCATaGACGCTCGGTCTACCAATG +
Preference number: 5 (lower is better)
Translates to: LHQQAFTRSSALRLLRSGAYASP*TLGLPM
Trigger: CATTGGTAGACCGAGCGTCAATGGGCTGGCATATGC...CCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAGTGAATGCCTGCTGGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS-3UTR CAA 90 bp CTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTTCTGCTCTGCGGCTGTaGCGGTCTGGGAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: LQYCPEDLCGRLVLERASSALRL*RSGKGL
Trigger: AAGCCCCTTCCCAGACCGCAACAGCCGCAGAGCAGA...ACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS GCA 90 bp GCAGTGTTAAGAGCAGCTGGCTGCTCAGTGCTGAGTCTGGCACTCTaGTCAGGTGTGTGCCTCACCTTGGCGCCATGCTTATGCAGAACT +
Preference number: 5 (lower is better)
Translates to: AVLRAAGCSVLSLAL*SGVCLTLAPCLCRT
Trigger: AGTTCTGCATAAGCATGGCGCCAAGGTGAGGCACACACCTGAGCAGAGTGCCAGACTCAGCACTGAGCAGCCAGCTGCTCTTAACACTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520408.5
CDS TCA 90 bp CCAGGTGCAGAGGGGTTGAATTTCTGCCCTGGGTGTCTCTGCAGTTaGTATTCTCTGGGGTACAGAGCTTCTGCACTCTTGCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PGAEGLNFCPGCLCS*YSLGYRASALLPGS
Trigger: GCTGCCTGGCAAGAGTGCAGAAGCTCTGTACCCCAGAGAATATCAACTGCAGAGACACCCAGGGCAGAAATTCAACCCCTCTGCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000518635.1
ENST00000644117.1
ENST00000646522.1
CDS-3UTR CAA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCCCACTGCCGGCTGGGTaGGGAGCGACCCCAGCGGCA +
Preference number: 5 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLPLPAG*GATPAA
Trigger: TGCCGCTGGGGTCGCTCCCAACCCAGCCGGCAGTGG...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCAAGCCACCCTTGTCTTaGGCATGGACATCGGCACCG +
Preference number: 5 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFKPPLS*AWTSAP
Trigger: CGGTGCCGATGTCCATGCCAAAGACAAGGGTGGCTT...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS GCA 90 bp CTGGCACTCTGCTCAGGTGTGTGCCTCACCTTGGCGCCATGCTTATaGAGAACTTCCATGACATCATTATGGGCTCTTTCGGCTGCAACA +
Preference number: 5 (lower is better)
Translates to: LALCSGVCLTLAPCL*RTSMTSLWALSAAT
Trigger: TGTTGCAGCCGAAAGAGCCCATAATGATGTCATGGAAGTTCTGCATAAGCATGGCGCCAAGGTGAGGCACACACCTGAGCAGAGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520408.5
CDS GCA 90 bp CTGAGTCTGGCACTCTGCTCAGGTGTGTGCCTCACCTTGGCGCCATaGTTATGCAGAACTTCCATGACATCATTATGGGCTCTTTCGGCT +
Preference number: 5 (lower is better)
Translates to: LSLALCSGVCLTLAP*LCRTSMTSLWALSA
Trigger: AGCCGAAAGAGCCCATAATGATGTCATGGAAGTTCTGCATAAGCATGGCGCCAAGGTGAGGCACACACCTGAGCAGAGTGCCAGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520408.5
CDS TCA 90 bp CCTGCACCCAAACCCATAACCCTTAATAAACAATTCAAAAGTCTCTaGCCTGCAGCGAAGTGCAGGGGAGAAGACTTCCGGCCGGCCATG +
Preference number: 5 (lower is better)
Translates to: PAPKPITLNKQFKSL*PAAKCRGEDFRPAM
Trigger: CATGGCCGGCCGGAAGTCTTCTCCCCTGCACTTCGCTGCAGGTCAGAGACTTTTGAATTGTTTATTAAGGGTTATGGGTTTGGGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS CCA 90 bp CTACAACAGACACGCGGTTGTAGCCTGCTGCGAAGTGTAAGGGCGTaGAATGCCGGCCCTCTAAGTCTCTACAATTCACATTTTGAGAGC +
Preference number: 5 (lower is better)
Translates to: LQQTRGCSLLRSVRA*NAGPLSLYNSHFES
Trigger: GCTCTCAAAATGTGAATTGTAGAGACTTAGAGGGCCGGCATTCCACGCCCTTACACTTCGCAGCAGGCTACAACCGCGTGTCTGTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS-3UTR CAA 90 bp ATATATCCATATGCAGAGACTACCAACTACAGTGAGTTTTGTAATGAGTACTGTCCACTGCCGGCTGGGTaGGGAGCGACCCCAGCGGCA +
Preference number: 5 (lower is better)
Translates to: IYPYAETTNYSEFCNEYCPLPAG*GATPAA
Trigger: TGCCGCTGGGGTCGCTCCCAACCCAGCCGGCAGTGG...ACAGTACTCATTACAAAACTCACTGTAGTTGGTAGTCTCTGCATATGGATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CAA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGGCCGGCCATGTCCTTaGCATTTACGTTTGCCGCGT +
Preference number: 5 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSGRPCP*HLRLPR
Trigger: ACGCGGCAAACGTAAATGCAAAGGACATGGCCGGCC...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAAGAGCTTCTGCACTCTaGCCAGGCAGCCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSRASAL*PGSPSW
Trigger: CCAAGAAGGGCTGCCTGGCAAGAGTGCAGAAGCTCT...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGAAAGGGCCAGTGAGGTaGTCTATGCTGCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGKGPVR*SMLLAA
Trigger: GGCTGCCAGCAGCATAGACAACCTCACTGGCCCTTT...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp AGCAGGCCAACAGCAGGTAAACTGGAACCATCAGGTCTGGAGAAGCCCTTTAGTTGCTCAGCCAGAAGCTaGGGTTGCACTGCTAATGAT +
Preference number: 5 (lower is better)
Translates to: SRPTAGKLEPSGLEKPFSCSARS*GCTAND
Trigger: ATCATTAGCAGTGCAACCCAAGCTTCTGGCTGAGCA...ACTAAAGGGCTTCTCCAGACCTGATGGTTCCAGTTTACCTGCTGTTGGCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTCGGCGACGGTACAGATaGTGCTGGTGGTACTGCAAC +
Preference number: 5 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSRRRYR*CWWYCN
Trigger: GTTGCAGTACCACCAGCACAATCTGTACCGTCGCCG...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTGGCACCAAGCCACCCTaGTCTTTGGCATGGACATCG +
Preference number: 5 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSGTKPP*SLAWTS
Trigger: CGATGTCCATGCCAAAGACAAGGGTGGCTTGGTGCC...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAAGCGCCATCCCCTGCATaGGAGGCTCCTCCTACGGCC +
Preference number: 5 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKEAPSPA*EAPPTA
Trigger: GGCCGTAGGAGGAGCCTCCAATGCAGGGGATGGCGC...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGCATATGCCAGCCCATaGACGCTCGGTCTACCAATG +
Preference number: 5 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSAYASP*TLGLPM
Trigger: CATTGGTAGACCGAGCGTCAATGGGCTGGCATATGC...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000517770.1
CDS GCA 90 bp ACTTCTACACGGTTCTTGGAAGCAGCCTCGTGCAGTGGAGTAAACTaGCAGAGATCCATGGCATTAACACAAGCTCCATGCTTTAGTAGC +
Preference number: 5 (lower is better)
Translates to: TSTRFLEAASCSGVN*QRSMALTQAPCFSS
Trigger: GCTACTAAAGCATGGAGCTTGTGTTAATGCCATGGATCTCTGGCAGTTTACTCCACTGCACGAGGCTGCTTCCAAGAACCGTGTAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310430.11
ENST00000517989.1
ENST00000518027.5
ENST00000518281.5
ENST00000519392.5
ENST00000520408.5
ENST00000644117.1
ENST00000646522.1
CDS-3UTR CAA 90 bp CTCCAGTACTGTCCCGAAGACCTCTGTGGCAGGCTTGTGTTGGAAAGAGCAAGTAGGAGTTCGTCTTTCTaGTATTCACCTGTAAGGACA +
Preference number: 5 (lower is better)
Translates to: LQYCPEDLCGRLVLERASRSSSF*YSPVRT
Trigger: TGTCCTTACAGGTGAATACAAGAAAGACGAACTCCT...ACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTACTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCGCCAGGCAGCCCTTCTaGGCAGCATCCAACAAAGCA +
Preference number: 5 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLARQPF*AASNKA
Trigger: TGCTTTGTTGGATGCTGCCAAGAAGGGCTGCCTGGC...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GAGAAGCCCTTTAGTTTTGGAACTCGGGTAGAGCCGGTGGAGACGTTCAGATTCGGAATTAAACCACCCTaGTCCTGGGCATTAACATCA +
Preference number: 5 (lower is better)
Translates to: EKPFSFGTRVEPVETFRFGIKPP*SWALTS
Trigger: TGATGTTAATGCCCAGGACAAGGGTGGTTTAATTCC...GAATCTGAACGTCTCCACCGGCTCTACCCGAGTTCCAAAACTAAAGGGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGCGCCATCCCCTGCATaGGAGGCTCCTCCTACGGCC +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAAPSPA*EAPPTA
Trigger: GGCCGTAGGAGGAGCCTCCAATGCAGGGGATGGCGC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGATGGCCTTCACCGGCTTaGACTTCTCTGAATTTAGGC +
Preference number: 5 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRWPSPA*TSLNLG
Trigger: GCCTAAATTCAGAGAAGTCAAAGCCGGTGAAGGCCA...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCATGTGGCAGGCTTGTGTaGGAAAGAGCAAGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSCGRLV*ERASGL
Trigger: AAGGCCACTTGCTCTTTCCAACACAAGCCTGCCACA...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS GCA 90 bp AGTAACAAAGAGCAGACTTCTACACGGTTCTTGGAAGCAGCCTCGTaGAGTGGAGTAAACTGCCAGAGATCCATGGCATTAACACAAGCT +
Preference number: 5 (lower is better)
Translates to: SNKEQTSTRFLEAAS*SGVNCQRSMALTQA
Trigger: AGCTTGTGTTAATGCCATGGATCTCTGGCAGTTTACTCCACTGCACGAGGCTGCTTCCAAGAACCGTGTAGAAGTCTGCTCTTTGTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310430.11
ENST00000517989.1
ENST00000518027.5
ENST00000518281.5
ENST00000519392.5
ENST00000520408.5
ENST00000644117.1
ENST00000646522.1
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCGGGACACGTCCCCATaGCGACAGGCCTCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARDTSP*RQASSS
Trigger: ACTGCTGGAGGCCTGTCGCAATGGGGACGTGTCCCG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAAGTTATCCCTGGCATTaGGATCAGCTCCTTGGCACA +
Preference number: 5 (lower is better)
Translates to: AAPVNISSKGTVAVEYVSSYPWH*DQLLGT
Trigger: TGTGCCAAGGAGCTGATCCAAATGCCAGGGATAACT...TGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGGGAAGCATGTATTTTTaGGAGGCATCCCCTGGATCC +
Preference number: 5 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGGSMYF*EASPGS
Trigger: GGATCCAGGGGATGCCTCCAAAAAATACATGCTTCC...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GGGAACTCTACACTTCAATTACTCACAAAAATGAAAAGTGACCTTAATCCAGGGGGCCGGCCATGTCCTTaGCATTTACGTTTGCCGCGT +
Preference number: 5 (lower is better)
Translates to: GNSTLQLLTKMKSDLNPGGRPCP*HLRLPR
Trigger: ACGCGGCAAACGTAAATGCAAAGGACATGGCCGGCC...CCCTGGATTAAGGTCACTTTTCATTTTTGTGAGTAATTGAAGTGTAGAGTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CAA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGATTGAGAGCTGCAAAGTaGCTTCACAGTTTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRLRAAK*LHSFQV
Trigger: GACTTGGAAACTGTGAAGCAACTTTGCAGCTCTCAA...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCTGCTCTGCGGCTGTaGCGGTCTGGGAAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASALRL*RSGKGL
Trigger: AAGCCCCTTCCCAGACCGCAACAGCCGCAGAGCAGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
CDS-3UTR CAA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGAGTTCCATGCTGTCATTaGTTAACAAAGCGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGVPCCH*LTKRQC
Trigger: ACACTGCCGCTTTGTTAACAAATGACAGCATGGAAC...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTGGCAGAGTGCACAAGTaGCTGAAGAAGCCTCATGTT +
Preference number: 5 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSGRVHK*LKKPHV
Trigger: AACATGAGGCTTCTTCAGCAACTTGTGCACTCTGCC...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTGGAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGATACAAGGTATCACAGTaGCTGTCGTATCCCCACATA +
Preference number: 5 (lower is better)
Translates to: VEGEGKRTSISGDEMMTRYKVSQ*LSYPHI
Trigger: TATGTGGGGATACGACAGCAACTGTGATACCTTGTA...TCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GAAAGGAACCTCCAGTCTTCTGGTGAGGTGATGAAGAACCATAACCACGCCCCCATCCTCAAACATGTGTaGGGTTGTATTAAACCTCTT +
Preference number: 5 (lower is better)
Translates to: ERNLQSSGEVMKNHNHAPILKHV*GCIKPL
Trigger: AAGAGGTTTAATACAACCCAACACATGTTTGAGGAT...GGGGGCGTGGTTATGGTTCTTCATCACCTCACCAGAAGACTGGAGGTTCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CAA 90 bp GAAAGGAACCTCCAGTCTTCTGGTGAGGTGATGAAGAACCATAACCACGCCCCCTACTTCTCCCAAAAATaGGGAACTCTACACTTCAAT +
Preference number: 5 (lower is better)
Translates to: ERNLQSSGEVMKNHNHAPYFSQK*GTLHFN
Trigger: ATTGAAGTGTAGAGTTCCCAATTTTTGGGAGAAGTA...GGGGGCGTGGTTATGGTTCTTCATCACCTCACCAGAAGACTGGAGGTTCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CAA 90 bp TGTTTCTCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTGTGAAAGCTACTCTCTaGCATATAAGCCCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: CFSYHWSRPINGSQAAFAVKATL*HISPSA
Trigger: TGCGGAGGGGCTTATATGCAAGAGAGTAGCTTTCAC...AGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CAA 90 bp GGGAACTCTACACTTCAATTACTCACAAAAATGAAAAGTGACCTTAATCCAGGGCCTTTGCATTTACGTTaGCCGCGTCCACCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: GNSTLQLLTKMKSDLNPGPLHLR*PRPPAS
Trigger: AGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAGG...CCCTGGATTAAGGTCACTTTTCATTTTTGTGAGTAATTGAAGTGTAGAGTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CAA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGAAGTCTTTCTACTCCTTaGATTAATTTGTGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGSLSTP*INLWRC
Trigger: GCACCGCCACAAATTAATCAAAGGAGTAGAAAGACT...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp TCATACCACTGGTCACGACCCATTAATGGATCACAAGCAGCATTTGCTAAAAATAACCACGCCCCCACTTaGTCCCATCACAATAACCTG +
Preference number: 5 (lower is better)
Translates to: SYHWSRPINGSQAAFAKNNHAPT*SHHNNL
Trigger: CAGGTTATTGTGATGGGACAAAGTGGGGGCGTGGTT...ATTTTTAGCAAATGCTGCTTGTGATCCATTAATGGGTCGTGACCAGTGGTATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS GCA 90 bp GATAAGATACTCTGGGTATGCATCATGTATTTTTGGCTGGAATGCTaGAGAGATGTCGTGCCTTTAGAGTATCCACCTGTTCTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: DKILWVCIMYFWLEC*RDVVPLEYPPVLLC
Trigger: ACAGAGGAGAACAGGTGGATACTCTAAAGGCACGACATCTCTGCAGCATTCCAGCCAAAAATACATGATGCATACCCAGAGTATCTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS GCA 90 bp AGTGATAAGATACTCTGGGTATGCATCATGTATTTTTGGCTGGAATaGTGCAGAGATGTCGTGCCTTTAGAGTATCCACCTGTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SDKILWVCIMYFWLE*CRDVVPLEYPPVLL
Trigger: GAGGAGAACAGGTGGATACTCTAAAGGCACGACATCTCTGCAGCATTCCAGCCAAAAATACATGATGCATACCCAGAGTATCTTATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS-3UTR CAA 90 bp ATATATCCATATGCAGAGACTACCAACTACAGTGAGTTTTGTAATGAGTACTGTCGGCGACGGTACAGATaGTGCTGGTGGTACTGCAAC +
Preference number: 5 (lower is better)
Translates to: IYPYAETTNYSEFCNEYCRRRYR*CWWYCN
Trigger: GTTGCAGTACCACCAGCACAATCTGTACCGTCGCCG...ACAGTACTCATTACAAAACTCACTGTAGTTGGTAGTCTCTGCATATGGATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CAA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTACTTCTACACGGTTCTaGGAAGCAGCCTCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFTSTRF*EAASCS
Trigger: ACTGCACGAGGCTGCTTCCAAGAACCGTGTAGAAGT...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp AATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAGTTTCAGTGTTTTGTGTTCCAGTGCATTCATCTaGGCGCCATGCTTATGCAGA +
Preference number: 5 (lower is better)
Translates to: NGSRSRCYMHMKSFSVLCSSAFI*APCLCR
Trigger: TCTGCATAAGCATGGCGCCAAGATGAATGCACTGGA...ACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAAGCCACCCTTGTCTTaGGCATGGACATCGGCACCG +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAKPPLS*AWTSAP
Trigger: CGGTGCCGATGTCCATGCCAAAGACAAGGGTGGCTT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGGCACCAAGCCACCCTaGTCTTTGGCATGGACATCG +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAGTKPP*SLAWTS
Trigger: CGATGTCCATGCCAAAGACAAGGGTGGCTTGGTGCC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTCATAAGTCCGCCACATaGACAGAAGCCCCATGCCTT +
Preference number: 5 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFHKSAT*TEAPCL
Trigger: AAGGCATGGGGCTTCTGTCAATGTGGCGGACTTATG...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGCCAGGCAGCCCTTCTaGGCAGCATCCAACAAAGCA +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAARQPF*AASNKA
Trigger: TGCTTTGTTGGATGCTGCCAAGAAGGGCTGCCTGGC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAGAGCTTCTGCACTCTaGCCAGGCAGCCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARASAL*PGSPSW
Trigger: CCAAGAAGGGCTGCCTGGCAAGAGTGCAGAAGCTCT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCCAGGTGCAGAGGGGTaGAATTTCTGCCCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTIPGAEG*NFCPGC
Trigger: ACACCCAGGGCAGAAATTCAACCCCTCTGCACCTGG...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCCAGGTGCAGAGGGGTaGAATTTCTGCCCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAPGAEG*NFCPGC
Trigger: ACACCCAGGGCAGAAATTCAACCCCTCTGCACCTGG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp TCATGGAGGGGAGTAAACGCCCACTTATCTGTTGCATTTACACACGTGTTGTATACGCCCACTTATCTGTaGCATTTACACACGTGTTGT +
Preference number: 5 (lower is better)
Translates to: SWRGVNAHLSVAFTHVLYTPTYL*HLHTCC
Trigger: ACAACACGTGTGTAAATGCAACAGATAAGTGGGCGT...ATACAACACGTGTGTAAATGCAACAGATAAGTGGGCGTTTACTCCCCTCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAAAGGGCCAGTGAGGTaGTCTATGCTGCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAKGPVR*SMLLAA
Trigger: GGCTGCCAGCAGCATAGACAACCTCACTGGCCCTTT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGATGCCATGCTTTTATATaGGAAAGGGTTCTTCATACG +
Preference number: 5 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGCHAFI*ERVLHT
Trigger: CGTATGAAGAACCCTTTCCAATATAAAAGCATGGCA...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS TCA 90 bp AGATATCCCGAAGGTGTTCAAGGCCAAGGCTTTTTAGAAATTGGCTaGTATTCATGTCAAGACCAGCAACTTCTCCTTCCTTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: RYPEGVQGQGFLEIG*YSCQDQQLLLPSFL
Trigger: CAGAAAGGAAGGAAGGAGAAGTTGCTGGTCTTGACATGAATATCAGCCAATTTCTAAAAAGCCTTGGCCTTGAACACCTTCGGGATATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS-3UTR CAA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCCTTTGCATTTACGTTaGCCGCGTCCACCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTIPLHLR*PRPPAS
Trigger: AGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAGG...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGCATATGCCAGCCCATaGACGCTCGGTCTACCAATG +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAAYASP*TLGLPM
Trigger: CATTGGTAGACCGAGCGTCAATGGGCTGGCATATGC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310430.11
ENST00000517770.1
ENST00000518281.5
CDS-3UTR CAA 90 bp GAGGGTGAGGGAAAAAGGACTTCCATTTCAGGTGACGAGATGATGACTAGAGGAAAATCAAAAACAAGCTaGTTGCCTGTCGTATGTGTA +
Preference number: 5 (lower is better)
Translates to: EGEGKRTSISGDEMMTRGKSKTS*LPVVCV
Trigger: TACACATACGACAGGCAACAAGCTTGTTTTTGATTT...TCCTCTAGTCATCATCTCGTCACCTGAAATGGAAGTCCTTTTTCCCTCACCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCAAGTCAGGTTGGTGTTaGTGCCCTTCTCTTGTAAGA +
Preference number: 5 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLKSGWC*CPSLVR
Trigger: TCTTACAAGAGAAGGGCACAAACACCAACCTGACTT...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAAACCTCTGTGGCAGGCTaGTGTTGGAAAGAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKETSVAG*CWKEQV
Trigger: CACTTGCTCTTTCCAACACAAGCCTGCCACAGAGGT...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTATTGCAATGGCAAGTTaGTGTCACACTGTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSIAMAS*CHTVFP
Trigger: AGGAAAGACAGTGTGACACAAACTTGCCATTGCAAT...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTTTGCAAGGCCATTTACAGGAATCCAGATAGTGCACATGTTAAAAAGGCGGGGAACCTAGACAACTTATaGCATTCTAATGCCGTTCTC +
Preference number: 5 (lower is better)
Translates to: VCKAIYRNPDSAHVKKAGNLDNL*HSNAVL
Trigger: GAGAACGGCATTAGAATGCAATAAGTTGTCTAGGTT...CCCCGCCTTTTTAACATGTGCACTATCTGGATTCCTGTAAATGGCCTTGCAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCATGGGGGAAAGGTGCTaGAAAATACACACCACTTCT +
Preference number: 5 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLMGERC*KIHTTS
Trigger: AGAAGTGGTGTGTATTTTCAAGCACCTTTCCCCCAT...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS TCA 90 bp TGGCGGTGCCCATATGCATTGATGCCTATTTCTTTCAACTCTTCATaGCCCATATCAGCCAACACATCTAGTGTAATCTGTTCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: WRCPYALMPISFNSS*PISANTSSVICSVS
Trigger: TGAAACAGAACAGATTACACTAGATGTGTTGGCTGATATGGGTCATGAAGAGTTGAAAGAAATAGGCATCAATGCATATGGGCACCGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTACTTCTACACGGTTCTaGGAAGCAGCCTCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNATSTRF*EAASCS
Trigger: ACTGCACGAGGCTGCTTCCAAGAACCGTGTAGAAGT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp AAACTACACAGATGGCAATTTCTTCAACCCTTTGTTACAGCAAAAGAGAAGGAAGTCACTTGTTTACGTTaGGGATGCAGAGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: KLHRWQFLQPFVTAKEKEVTCLR*GCREAT
Trigger: TGTGGCCTCTCTGCATCCCAAACGTAAACAAGTGAC...TTCCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATTGCCATCTGTGTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTCATAAGTCCGCCACATaGACAGAAGCCCCATGCCTT +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAHKSAT*TEAPCL
Trigger: AAGGCATGGGGCTTCTGTCAATGTGGCGGACTTATG...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GAGGGGAGTAAACGCCCACTTATCTGTTGCATTTACACACGTGTTGTATTTTATGGAATTAAACCACCCTaGTCCTGGGCATTAACATCA +
Preference number: 5 (lower is better)
Translates to: EGSKRPLICCIYTRVVFYGIKPP*SWALTS
Trigger: TGATGTTAATGCCCAGGACAAGGGTGGTTTAATTCC...ATAAAATACAACACGTGTGTAAATGCAACAGATAAGTGGGCGTTTACTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS-3UTR CAA 90 bp GATATGTTAAAAGGCCGCCCCTGTAAACATTTCCTCAAAGGGAACAGTAGCAGTTTTGTCAGCGTGACTTaGTGCAAAATATCCTCAAGA +
Preference number: 5 (lower is better)
Translates to: DMLKGRPCKHFLKGNSSSFVSVT*CKISSR
Trigger: TCTTGAGGATATTTTGCACAAAGTCACGCTGACAAA...ACTGCTACTGTTCCCTTTGAGGAAATGTTTACAGGGGCGGCCTTTTAACATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp AATGGGAGCAGAAGCAGGTGTTATATGCACATGAAGAGTTTCAGTGTTTTGTGTAGTTCCAGCACTGGGTaGAAGCCAAAATCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: NGSRSRCYMHMKSFSVLCSSSTG*KPKSKQ
Trigger: TTGCTTTGATTTTGGCTTCAACCCAGTGCTGGAACT...ACACAAAACACTGAAACTCTTCATGTGCATATAACACCTGCTTCTGCTCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCACCACAGCTGTAGGATaGCCAGATTTAGAAAAACCA +
Preference number: 5 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLTTAVG*PDLEKP
Trigger: TGGTTTTTCTAAATCTGGCAATCCTACAGCTGTGGT...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTGAGTTTTGTAATGAGTACTGTGCAACCACTGAAGAATTCCTTGGATTCACTTTCACATTGGCATATTTaGGTCTCCCCGTCTAGACTG +
Preference number: 5 (lower is better)
Translates to: VSFVMSTVQPLKNSLDSLSHWHI*VSPSRL
Trigger: CAGTCTAGACGGGGAGACCAAAATATGCCAATGTGA...AAGTGAATCCAAGGAATTCTTCAGTGGTTGCACAGTACTCATTACAAAACTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAGTTATCCCTGGCATTaGGATCAGCTCCTTGGCACA +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASYPWH*DQLLGT
Trigger: TGTGCCAAGGAGCTGATCCAAATGCCAGGGATAACT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGTCACTTGTTTACGTTaGGGATGCAGAGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAVTCLR*GCREAT
Trigger: TGTGGCCTCTCTGCATCCCAAACGTAAACAAGTGAC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCCAGTGCATTCATCTaGGCGCCATGCTTATGCAGA +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASSAFI*APCLCR
Trigger: TCTGCATAAGCATGGCGCCAAGATGAATGCACTGGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTGGGTGTCTCTGCAGTaGATATTCTCTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAWVSLQ*IFSGVQ
Trigger: CTGTACCCCAGAGAATATCAACTGCAGAGACACCCA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTACTCCTTTGATTAATTaGTGGCGGTGCCCATATGCA +
Preference number: 5 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFTPLIN*WRCPYA
Trigger: TGCATATGGGCACCGCCACAAATTAATCAAAGGAGT...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTGAGTCACTACACTGGTaGCTCACACAGACCAACATC +
Preference number: 5 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTIESLHW*LTQTNI
Trigger: GATGTTGGTCTGTGTGAGCAACCAGTGTAGTGACTC...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGGCAGGTTAAGTTCCTaGATGCCCTCCTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAGRLSS*MPSFGK
Trigger: CTTTCCAAAGGAGGGCATCAAGGAACTTAACCTGCC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCTCTACAATTCACATTTaGAGAGCTGCAAAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLSTIHI*RAAKLL
Trigger: AAGCAACTTTGCAGCTCTCAAAATGTGAATTGTAGA...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp ATGCATGTCTGGCAAATCAAAAACAAGCTTGTTGCCTGTCGTATGTGTATATTTACGCCCACTTATCTGTaGCATTTACACACGTGTTGT +
Preference number: 5 (lower is better)
Translates to: MHVWQIKNKLVACRMCIFTPTYL*HLHTCC
Trigger: ACAACACGTGTGTAAATGCAACAGATAAGTGGGCGT...AAATATACACATACGACAGGCAACAAGCTTGTTTTTGATTTGCCAGACATGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp AATGATTTTGTCAGCGTGACTTTGTGCAAAATATCCTCAAGAAGGCTCTGGCTCTGTTCTTTCCTAACTTaGAATGGGTTTTCTAGCCTT +
Preference number: 5 (lower is better)
Translates to: NDFVSVTLCKISSRRLWLCSFLT*NGFSSL
Trigger: AAGGCTAGAAAACCCATTCAAAGTTAGGAAAGAACA...GAGCCAGAGCCTTCTTGAGGATATTTTGCACAAAGTCACGCTGACAAAATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCTACTCCGAGTGCTGTaGCCAGGCAACATAACATTT +
Preference number: 5 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTILLRVL*PGNITF
Trigger: AAATGTTATGTTGCCTGGCAACAGCACTCGGAGTAG...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTTGAGAGCTGCAAAGTaGCTTCACAGTTTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNALRAAK*LHSFQV
Trigger: GACTTGGAAACTGTGAAGCAACTTTGCAGCTCTCAA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTGGAATTAAACCACCCTaGTCCTGGGCATTAACATCA +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNAGIKPP*SWALTS
Trigger: TGATGTTAATGCCCAGGACAAGGGTGGTTTAATTCC...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTACGCCCACTTATCTGTaGCATTTACACACGTGTTGT +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNATPTYL*HLHTCC
Trigger: ACAACACGTGTGTAAATGCAACAGATAAGTGGGCGT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTACTCCTTTGATTAATTaGTGGCGGTGCCCATATGCA +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNATPLIN*WRCPYA
Trigger: TGCATATGGGCACCGCCACAAATTAATCAAAGGAGT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp AGTAAGACACACTTGACAGCTACTGAAAACTACACAGATGGCAATTTCTTCAACATCGTTTTCAGGGCTTaGAATTGCAATGGCAAGTTT +
Preference number: 5 (lower is better)
Translates to: SKTHLTATENYTDGNFFNIVFRA*NCNGKF
Trigger: AAACTTGCCATTGCAATTCAAAGCCCTGAAAACGAT...GTTGAAGAAATTGCCATCTGTGTAGTTTTCAGTAGCTGTCAAGTGTGTCTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp CAATGGCAAGTTTGTGTCACACTGTCTTTCCTATTCCTCCTCGTGTTTATATTTTGCACTGCTGTTATTTaGCATCGAATCAAAACTCTG +
Preference number: 5 (lower is better)
Translates to: QWQVCVTLSFLFLLVFIFCTAVI*HRIKTL
Trigger: CAGAGTTTTGATTCGATGCAAAATAACAGCAGTGCA...AAATATAAACACGAGGAGGAATAGGAAAGACAGTGTGACACAAACTTGCCATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAGGAGTTCGTCTTTCTaGTATTCACCTGTAAGGACA +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNARSSSF*YSPVRT
Trigger: TGTCCTTACAGGTGAATACAAGAAAGACGAACTCCT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTACTTTCGCCCATCACTaGCATGGCAATTCACATTTA +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNATFAHH*HGNSHL
Trigger: TAAATGTGAATTGCCATGCAAGTGATGGGCGAAAGT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAGTCTTTCTACTCCTTaGATTAATTTGTGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASLSTP*INLWRC
Trigger: GCACCGCCACAAATTAATCAAAGGAGTAGAAAGACT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp TATCCACTATTCGAGTCTGAATCCCAGCATTCTCAACTAAAGAAACAATCAAGTAAACAAGAATCCTGGTaGCACTGCTGTTATTTTGCA +
Preference number: 5 (lower is better)
Translates to: YPLFESESQHSQLKKQSSKQESW*HCCYFA
Trigger: TGCAAAATAACAGCAGTGCAACCAGGATTCTTGTTT...ACTTGATTGTTTCTTTAGTTGAGAATGCTGGGATTCAGACTCGAATAGTGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTTCTACAATTCACATTTaGAGAGCTGCAAAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNASTIHI*RAAKLL
Trigger: AAGCAACTTTGCAGCTCTCAAAATGTGAATTGTAGA...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310430.11
ENST00000518281.5
CDS-3UTR CAA 90 bp ATTTCCTCAAAGGGAACAGTAGCAGTTGAGTATGTATCAGTTACTCATACTATTAATTTCTTCAACCCTTaGTTACAGCAAAAGAGAAGG +
Preference number: 5 (lower is better)
Translates to: ISSKGTVAVEYVSVTHTINFFNP*LQQKRR
Trigger: CCTTCTCTTTTGCTGTAACAAAGGGTTGAAGAAATT...AATAGTATGAGTAACTGATACATACTCAACTGCTACTGTTCCCTTTGAGGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310430.11
CDS-3UTR CAA 90 bp GTAGCAGTTGAGTATGTATCAGTTACTCATACTATTCATCACTATAGCAATGCTAATGGAGAGATTCACTaGTCTCACACAATTTGTCAA +
Preference number: 5 (lower is better)
Translates to: VAVEYVSVTHTIHHYSNANGEIH*SHTICQ
Trigger: TTGACAAATTGTGTGAGACAAGTGAATCTCTCCATT...AGCATTGCTATAGTGATGAATAGTATGAGTAACTGATACATACTCAACTGCTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518281.5
CDS TCA 72 bp ACTGCCGGCTGGGTTGGGAGCGACCCCAGCGGCAGATaGAGTAGAAACCGCTGGGACCACGGGAGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: TAGWVGSDPSGR*SRNRWDHGSGG
Trigger: GCCGCCGCTCCCGTGGTCCCAGCGGTTTCTACTTCATCTGCCGCTGGGGTCGCTCCCAACCCAGCCGGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS CCA 72 bp CCACGGGAGCGGCGGCGACGGTACAGATTGTGCTGGTaGTACTGCAACAGCTGGTACCGTCAACCGGGTCCG +
Preference number: 6 (lower is better)
Translates to: PRERRRRYRLCW*YCNSWYRQPGP
Trigger: CGGACCCGGTTGACGGTACCAGCTGTTGCAGTACCACCAGCACAATCTGTACCGTCGCCGCCGCTCCCGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS GCA 72 bp AGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTaGAATGAGCCGAGATCGCGCCCCTATACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RQENGVNPGGGA*NEPRSRPYTPA
Trigger: GGCTGGAGTATAGGGGCGCGATCTCGGCTCATTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518281.5
CDS CCA 72 bp GGACCACGGGAGCGGCGGCGACGGTACAGATTGTGCTaGTGGTACTGCAACAGCTGGTACCGTCAACCGGGT +
Preference number: 6 (lower is better)
Translates to: GPRERRRRYRLC*WYCNSWYRQPG
Trigger: ACCCGGTTGACGGTACCAGCTGTTGCAGTACCACCAGCACAATCTGTACCGTCGCCGCCGCTCCCGTGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS TCA 72 bp CCGCTGGGTGATGGAGCCGTGACGTTAGCCAGCTTGTaGAGGCAGCATCACCAGTGCCTTGGAGACGGGCAG +
Preference number: 6 (lower is better)
Translates to: PLGDGAVTLASL*RQHHQCLGDGQ
Trigger: CTGCCCGTCTCCAAGGCACTGGTGATGCTGCCTTCACAAGCTGGCTAACGTCACGGCTCCATCACCCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519392.5
CDS CCA 72 bp CGACGGTACAGATTGTGCTGGTGGTACTGCAACAGCTaGTACCGTCAACCGGGTCCGGGGATCGGGGCCTGT +
Preference number: 6 (lower is better)
Translates to: RRYRLCWWYCNS*YRQPGPGIGAC
Trigger: ACAGGCCCCGATCCCCGGACCCGGTTGACGGTACCAGCTGTTGCAGTACCACCAGCACAATCTGTACCGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS CCA 72 bp CCTTCCTTTCTGTTCCCGCGGCGCCATCCCCTGCATTaGAGGCTCCTCCTACGGCCAACTCTGCTAAAGGGC +
Preference number: 6 (lower is better)
Translates to: PSFLFPRRHPLH*RLLLRPTLLKG
Trigger: GCCCTTTAGCAGAGTTGGCCGTAGGAGGAGCCTCCAATGCAGGGGATGGCGCCGCGGGAACAGAAAGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS CAA 72 bp CCTCCTACGGCCAACTCTGCTAAAGGGCCAGTGAGGTaGTCTATGCTGCTGGCAGCCGAGAGGCAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: PPTANSAKGPVR*SMLLAAERQEG
Trigger: CCCCTCCTGCCTCTCGGCTGCCAGCAGCATAGACAACCTCACTGGCCCTTTAGCAGAGTTGGCCGTAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS CAA 90 bp GCAGGGGAGAAGACTTCCGGCCGGCCATGTCCTTTGCATTTACGTTaGCCGCGTCCACCAGCCTCTTTACCCGGGACACGTCCCCATTGC +
Preference number: 6 (lower is better)
Translates to: AGEKTSGRPCPLHLR*PRPPASLPGTRPHC
Trigger: GCAATGGGGACGTGTCCCGGGTAAAGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAGGACATGGCCGGCCGGAAGTCTTCTCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS CAA 90 bp TTGGAGGCTCCTCCTACGGCCAACTCTGCTAAAGGGCCAGTGAGGTaGTCTATGCTGCTGGCAGCCGAGAGGCAGGAGGGGGTGGATGCT +
Preference number: 6 (lower is better)
Translates to: LEAPPTANSAKGPVR*SMLLAAERQEGVDA
Trigger: AGCATCCACCCCCTCCTGCCTCTCGGCTGCCAGCAGCATAGACAACCTCACTGGCCCTTTAGCAGAGTTGGCCGTAGGAGGAGCCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS TCA 72 bp AGGCTCCTCCTACGGCCAACTCTGCTAAAGGGCCAGTaGGGTTGTCTATGCTGCTGGCAGCCGAGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: RLLLRPTLLKGQ*GCLCCWQPRGR
Trigger: CCTGCCTCTCGGCTGCCAGCAGCATAGACAACCTCACTGGCCCTTTAGCAGAGTTGGCCGTAGGAGGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS CAA 72 bp TCCTTCCTTTCTGTTCCCGCGGCGCCATCCCCTGCATaGGAGGCTCCTCCTACGGCCAACTCTGCTAAAGGG +
Preference number: 6 (lower is better)
Translates to: SFLSVPAAPSPA*EAPPTANSAKG
Trigger: CCCTTTAGCAGAGTTGGCCGTAGGAGGAGCCTCCAATGCAGGGGATGGCGCCGCGGGAACAGAAAGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS CAA 90 bp CTGCAGCGAAGTGCAGGGGAGAAGACTTCCGGCCGGCCATGTCCTTaGCATTTACGTTTGCCGCGTCCACCAGCCTCTTTACCCGGGACA +
Preference number: 6 (lower is better)
Translates to: LQRSAGEKTSGRPCP*HLRLPRPPASLPGT
Trigger: TGTCCCGGGTAAAGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAGGACATGGCCGGCCGGAAGTCTTCTCCCCTGCACTTCGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS CAA 90 bp ACTTCTCCTTCCTTCCTTTCTGTTCCCGCGGCGCCATCCCCTGCATaGGAGGCTCCTCCTACGGCCAACTCTGCTAAAGGGCCAGTGAGG +
Preference number: 6 (lower is better)
Translates to: TSPSFLSVPAAPSPA*EAPPTANSAKGPVR
Trigger: CCTCACTGGCCCTTTAGCAGAGTTGGCCGTAGGAGGAGCCTCCAATGCAGGGGATGGCGCCGCGGGAACAGAAAGGAAGGAAGGAGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS GCA 72 bp AGACTTCCGGCCGGCCATGTCCTTTGCATTTACGTTTaGCGCGTCCACCAGCCTCTTTACCCGGGACACGTC +
Preference number: 6 (lower is better)
Translates to: RLPAGHVLCIYV*RVHQPLYPGHV
Trigger: GACGTGTCCCGGGTAAAGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAGGACATGGCCGGCCGGAAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS GCA 72 bp AGAGCAGCTGGCTGCTCAGTGCTGAGTCTGGCACTCTaGTCAGGTGTGTGCCTCACCTTGGCGCCATGCTTA +
Preference number: 6 (lower is better)
Translates to: RAAGCSVLSLAL*SGVCLTLAPCL
Trigger: TAAGCATGGCGCCAAGGTGAGGCACACACCTGAGCAGAGTGCCAGACTCAGCACTGAGCAGCCAGCTGCTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520408.5
CDS GCA 72 bp GTGCAGGGGAGAAGACTTCCGGCCGGCCATGTCCTTTaGATTTACGTTTGCCGCGTCCACCAGCCTCTTTAC +
Preference number: 6 (lower is better)
Translates to: VQGRRLPAGHVL*IYVCRVHQPLY
Trigger: GTAAAGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAGGACATGGCCGGCCGGAAGTCTTCTCCCCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS CAA 72 bp AAGACTTCCGGCCGGCCATGTCCTTTGCATTTACGTTaGCCGCGTCCACCAGCCTCTTTACCCGGGACACGT +
Preference number: 6 (lower is better)
Translates to: KTSGRPCPLHLR*PRPPASLPGTR
Trigger: ACGTGTCCCGGGTAAAGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAGGACATGGCCGGCCGGAAGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS GCA 72 bp TGCTCAGTGCTGAGTCTGGCACTCTGCTCAGGTGTGTaGCTCACCTTGGCGCCATGCTTATGCAGAACTTCC +
Preference number: 6 (lower is better)
Translates to: CSVLSLALCSGV*LTLAPCLCRTS
Trigger: GGAAGTTCTGCATAAGCATGGCGCCAAGGTGAGGCACACACCTGAGCAGAGTGCCAGACTCAGCACTGAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520408.5
CDS CAA 72 bp AGTGCAGGGGAGAAGACTTCCGGCCGGCCATGTCCTTaGCATTTACGTTTGCCGCGTCCACCAGCCTCTTTA +
Preference number: 6 (lower is better)
Translates to: SAGEKTSGRPCP*HLRLPRPPASL
Trigger: TAAAGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAGGACATGGCCGGCCGGAAGTCTTCTCCCCTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000520408.5
ENST00000522110.1
ENST00000644117.1
ENST00000646522.1
CDS CAA 90 bp GCCAGGTGCAGAGGGGTTGAATTTCTGCCCTGGGTGTCTCTGCAGTaGATATTCTCTGGGGTACAGAGCTTCTGCACTCTTGCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: ARCRGVEFLPWVSLQ*IFSGVQSFCTLARQ
Trigger: CTGCCTGGCAAGAGTGCAGAAGCTCTGTACCCCAGAGAATATCAACTGCAGAGACACCCAGGGCAGAAATTCAACCCCTCTGCACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000518635.1
ENST00000644117.1
ENST00000646522.1
CDS TCA 72 bp AGGCCTCTGGGGGCATGGCATCTATCAGCAAAGCTCTaGTATCGTCAGCTGTTGCCAGATCCAGAGGCGTCT +
Preference number: 6 (lower is better)
Translates to: RPLGAWHLSAKL*YRQLLPDPEAS
Trigger: AGACGCCTCTGGATCTGGCAACAGCTGACGATATCAGAGCTTTGCTGATAGATGCCATGCCCCCAGAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000519191.1
ENST00000644117.1
ENST00000646522.1
CDS CCA 72 bp CCTGCTGCCAGGTGCAGAGGGGTTGAATTTCTGCCCTaGGTGTCTCTGCAGTTGATATTCTCTGGGGTACAG +
Preference number: 6 (lower is better)
Translates to: PAARCRGVEFLP*VSLQLIFSGVQ
Trigger: CTGTACCCCAGAGAATATCAACTGCAGAGACACCCAGGGCAGAAATTCAACCCCTCTGCACCTGGCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000518635.1
ENST00000644117.1
ENST00000646522.1
CDS TCA 72 bp GCTGGTGAGATCAGAGAGGCACTCACTACAGTAGCCTaGGGTTTAAAACAGGTAGGTAAGGCCTCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: AGEIREALTTVA*GLKQVGKASGG
Trigger: GCCCCCAGAGGCCTTACCTACCTGTTTTAAACCTCAGGCTACTGTAGTGAGTGCCTCTCTGATCTCACCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS CCA 72 bp ACACGCGGTTGTAGCCTGCTGCGAAGTGTAAGGGCGTaGAATGCCGGCCCTCTAAGTCTCTACAATTCACAT +
Preference number: 6 (lower is better)
Translates to: TRGCSLLRSVRA*NAGPLSLYNSH
Trigger: ATGTGAATTGTAGAGACTTAGAGGGCCGGCATTCCACGCCCTTACACTTCGCAGCAGGCTACAACCGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS CAA 72 bp CTGAGTCTGGCACTCTGCTCAGGTGTGTGCCTCACCTaGGCGCCATGCTTATGCAGAACTTCCATGACATCA +
Preference number: 6 (lower is better)
Translates to: LSLALCSGVCLT*APCLCRTSMTS
Trigger: TGATGTCATGGAAGTTCTGCATAAGCATGGCGCCAAGGTGAGGCACACACCTGAGCAGAGTGCCAGACTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520408.5
CDS CAA 90 bp TGCTCAGTGCTGAGTCTGGCACTCTGCTCAGGTGTGTGCCTCACCTaGGCGCCATGCTTATGCAGAACTTCCATGACATCATTATGGGCT +
Preference number: 6 (lower is better)
Translates to: CSVLSLALCSGVCLT*APCLCRTSMTSLWA
Trigger: AGCCCATAATGATGTCATGGAAGTTCTGCATAAGCATGGCGCCAAGGTGAGGCACACACCTGAGCAGAGTGCCAGACTCAGCACTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520408.5
CDS GCA 72 bp GCACTCTGCTCAGGTGTGTGCCTCACCTTGGCGCCATaGTTATGCAGAACTTCCATGACATCATTATGGGCT +
Preference number: 6 (lower is better)
Translates to: ALCSGVCLTLAP*LCRTSMTSLWA
Trigger: AGCCCATAATGATGTCATGGAAGTTCTGCATAAGCATGGCGCCAAGGTGAGGCACACACCTGAGCAGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520408.5
CDS CAA 90 bp TCAGCGCCATGGCTAAGTAACAAAGAGCAGACTTCTACACGGTTCTaGGAAGCAGCCTCGTGCAGTGGAGTAAACTGCCAGAGATCCATG +
Preference number: 6 (lower is better)
Translates to: SAPWLSNKEQTSTRF*EAASCSGVNCQRSM
Trigger: CATGGATCTCTGGCAGTTTACTCCACTGCACGAGGCTGCTTCCAAGAACCGTGTAGAAGTCTGCTCTTTGTTACTTAGCCATGGCGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310430.11
ENST00000517989.1
ENST00000518027.5
ENST00000518281.5
ENST00000519392.5
ENST00000520408.5
ENST00000644117.1
ENST00000646522.1
CDS GCA 72 bp TGCTCAGGTGTGTGCCTCACCTTGGCGCCATGCTTATaGAGAACTTCCATGACATCATTATGGGCTCTTTCG +
Preference number: 6 (lower is better)
Translates to: CSGVCLTLAPCL*RTSMTSLWALS
Trigger: CGAAAGAGCCCATAATGATGTCATGGAAGTTCTGCATAAGCATGGCGCCAAGGTGAGGCACACACCTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520408.5
CDS CAA 90 bp CAGTCTTCTGGTGAGGTGATGAAGAACCATAACCACGCCCCCACTTaGTCCCATCACAATAACCTGTTTTCTTGTCCTAACCGGACCCTG +
Preference number: 6 (lower is better)
Translates to: QSSGEVMKNHNHAPT*SHHNNLFSCPNRTL
Trigger: CAGGGTCCGGTTAGGACAAGAAAACAGGTTATTGTGATGGGACAAAGTGGGGGCGTGGTTATGGTTCTTCATCACCTCACCAGAAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS TCA 72 bp CAGGTTATTATAGCCTGCTGCCAGGTGCAGAGGGGTTaGATTTCTGCCCTGGGTGTCTCTGCAGTTGATATT +
Preference number: 6 (lower is better)
Translates to: QVIIACCQVQRG*ISALGVSAVDI
Trigger: AATATCAACTGCAGAGACACCCAGGGCAGAAATTCAACCCCTCTGCACCTGGCAGCAGGCTATAATAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000518635.1
ENST00000644117.1
ENST00000646522.1
CDS GCA 72 bp CACTATCTACGAATGACCACTCAGAATCTGCTGCACTaGTTCATTGCCCATCTGTGCTGCTGTGAAGCCTTG +
Preference number: 6 (lower is better)
Translates to: HYLRMTTQNLLH*FIAHLCCCEAL
Trigger: CAAGGCTTCACAGCAGCACAGATGGGCAATGAAGCAGTGCAGCAGATTCTGAGTGGTCATTCGTAGATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519930.1
CDS CAA 72 bp TGGCTAAGTAACAAAGAGCAGACTTCTACACGGTTCTaGGAAGCAGCCTCGTGCAGTGGAGTAAACTGCCAG +
Preference number: 6 (lower is better)
Translates to: WLSNKEQTSTRF*EAASCSGVNCQ
Trigger: CTGGCAGTTTACTCCACTGCACGAGGCTGCTTCCAAGAACCGTGTAGAAGTCTGCTCTTTGTTACTTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310430.11
ENST00000517989.1
ENST00000518027.5
ENST00000518281.5
ENST00000519392.5
ENST00000520408.5
ENST00000644117.1
ENST00000646522.1
CDS CAA 72 bp AGAGGGGTTGAATTTCTGCCCTGGGTGTCTCTGCAGTaGATATTCTCTGGGGTACAGAGCTTCTGCACTCTT +
Preference number: 6 (lower is better)
Translates to: RGVEFLPWVSLQ*IFSGVQSFCTL
Trigger: AAGAGTGCAGAAGCTCTGTACCCCAGAGAATATCAACTGCAGAGACACCCAGGGCAGAAATTCAACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000518635.1
ENST00000644117.1
ENST00000646522.1
CDS GCA 72 bp AGGGTGTCCAGTGCATTCATCTTGGCGCCATGCTTATaGAGAACTTCCATGACATCATTATGGGCTCTTTCG +
Preference number: 6 (lower is better)
Translates to: RVSSAFILAPCL*RTSMTSLWALS
Trigger: CGAAAGAGCCCATAATGATGTCATGGAAGTTCTGCATAAGCATGGCGCCAAGATGAATGCACTGGACACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS CCA 72 bp ATACGTACAAGTCAATCTCTCCCTAAGCTCCGGAGTTaGAGCCATATCCACAGCACTTTTGCCATGGCAGTT +
Preference number: 6 (lower is better)
Translates to: IRTSQSLPKLRS*SHIHSTFAMAV
Trigger: AACTGCCATGGCAAAAGTGCTGTGGATATGGCTCCAACTCCGGAGCTTAGGGAGAGATTGACTTGTACGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518027.5
ENST00000519392.5
CDS CCA 72 bp CAGCTTCATGCAGAGGTGTATAGTTCCAGTTATCCCTaGCATTTGGATCAGCTCCTTGGCACAATAACAGAC +
Preference number: 6 (lower is better)
Translates to: QLHAEVYSSSYP*HLDQLLGTITD
Trigger: GTCTGTTATTGTGCCAAGGAGCTGATCCAAATGCCAGGGATAACTGGAACTATACACCTCTGCATGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000520408.5
ENST00000644117.1
ENST00000646522.1
CDS CAA 72 bp GGTGAGGTGATGAAGAACCATAACCACGCCCCCACTTaGTCCCATCACAATAACCTGTTTTCTTGTCCTAAC +
Preference number: 6 (lower is better)
Translates to: GEVMKNHNHAPT*SHHNNLFSCPN
Trigger: GTTAGGACAAGAAAACAGGTTATTGTGATGGGACAAAGTGGGGGCGTGGTTATGGTTCTTCATCACCTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522110.1
CDS GCA 72 bp CTCTGGGTATGCATCATGTATTTTTGGCTGGAATGCTaGAGAGATGTCGTGCCTTTAGAGTATCCACCTGTT +
Preference number: 6 (lower is better)
Translates to: LWVCIMYFWLEC*RDVVPLEYPPV
Trigger: AACAGGTGGATACTCTAAAGGCACGACATCTCTGCAGCATTCCAGCCAAAAATACATGATGCATACCCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS CCA 72 bp AAATTCATAAGTCAATCTCTCCCTAAGCTCCGGAGTTaGAGCCATATCCACAGCACTTTTGCCATGGCAGTT +
Preference number: 6 (lower is better)
Translates to: KFISQSLPKLRS*SHIHSTFAMAV
Trigger: AACTGCCATGGCAAAAGTGCTGTGGATATGGCTCCAACTCCGGAGCTTAGGGAGAGATTGACTTATGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310430.11
ENST00000517989.1
ENST00000518281.5
ENST00000520408.5
ENST00000644117.1
ENST00000646522.1
CDS CAA 72 bp CATGCAGAGGTGTATAGTTCCAGTTATCCCTGGCATTaGGATCAGCTCCTTGGCACAATAACAGACTCACAA +
Preference number: 6 (lower is better)
Translates to: HAEVYSSSYPWH*DQLLGTITDSQ
Trigger: TTGTGAGTCTGTTATTGTGCCAAGGAGCTGATCCAAATGCCAGGGATAACTGGAACTATACACCTCTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000520408.5
ENST00000644117.1
ENST00000646522.1
CDS TCA 72 bp GAATGCCGGCCCTCTAAGTCTCTACAATTCACATTTTaGGAGCTGCAAAGTTGCTTCACAGTTTCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: ECRPSKSLQFTF*ELQSCFTVSKS
Trigger: AGACTTGGAAACTGTGAAGCAACTTTGCAGCTCTCAAAATGTGAATTGTAGAGACTTAGAGGGCCGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000519930.1
ENST00000644117.1
ENST00000646522.1
CDS CAA 72 bp CTGCTAGATGTAAAGGAGTCGACTTTCGCCCATCACTaGCATGGCAATTCACATTTAGAGGAGTCAGTAAAG +
Preference number: 6 (lower is better)
Translates to: LLDVKESTFAHH*HGNSHLEESVK
Trigger: CTTTACTGACTCCTCTAAATGTGAATTGCCATGCAAGTGATGGGCGAAAGTCGACTCCTTTACATCTAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310430.11
ENST00000517989.1
ENST00000518027.5
ENST00000518281.5
ENST00000519392.5
ENST00000520408.5
ENST00000644117.1
ENST00000646522.1
CDS TCA 72 bp GAAGGTGTTCAAGGCCAAGGCTTTTTAGAAATTGGCTaGTATTCATGTCAAGACCAGCAACTTCTCCTTCCT +
Preference number: 6 (lower is better)
Translates to: EGVQGQGFLEIG*YSCQDQQLLLP
Trigger: AGGAAGGAGAAGTTGCTGGTCTTGACATGAATATCAGCCAATTTCTAAAAAGCCTTGGCCTTGAACACCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS TCA 72 bp TCCCGTCTCAAGATCACCATTAAGGCTGAAGTAGAATaGTCACTATCTACGAATGACCACTCAGAATCTGCT +
Preference number: 6 (lower is better)
Translates to: SRLKITIKAEVE*SLSTNDHSESA
Trigger: AGCAGATTCTGAGTGGTCATTCGTAGATAGTGATCATTCTACTTCAGCCTTAATGGTGATCTTGAGACGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519930.1
CDS CCA 72 bp AGTGATAAGATACTCTGGGTATGCATCATGTATTTTTaGCTGGAATGCTGCAGAGATGTCGTGCCTTTAGAG +
Preference number: 6 (lower is better)
Translates to: SDKILWVCIMYF*LECCRDVVPLE
Trigger: CTCTAAAGGCACGACATCTCTGCAGCATTCCAGCCAAAAATACATGATGCATACCCAGAGTATCTTATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517770.1
CDS GCA 72 bp AAAATAAATCCCGGCCCCAAACATTCCTCCTATGTATaGATGTCGCTCATCAAACCCTTTATGAATAATGGC +
Preference number: 6 (lower is better)
Translates to: KINPGPKHSSYV*MSLIKPFMNNG
Trigger: GCCATTATTCATAAAGGGTTTGATGAGCGACATGCATACATAGGAGGAATGTTTGGGGCCGGGATTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS CCA 72 bp CCACATGCATGGTCTCATTTAATCATTACAACAAGCTaGAAAGGAGGTCTTGGAATCCAACTTTTACTACCC +
Preference number: 6 (lower is better)
Translates to: PHAWSHLIITTS*KGGLGIQLLLP
Trigger: GGGTAGTAAAAGTTGGATTCCAAGACCTCCTTTCCAGCTTGTTGTAATGATTAAATGAGACCATGCATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518635.1
CDS CAA 72 bp TGTCCACCTAAGAGTCTTTCTACTCCTTTGATTAATTaGTGGCGGTGCCCATATGCATTGATGCCTATTTCT +
Preference number: 6 (lower is better)
Translates to: CPPKSLSTPLIN*WRCPYALMPIS
Trigger: AGAAATAGGCATCAATGCATATGGGCACCGCCACAAATTAATCAAAGGAGTAGAAAGACTCTTAGGTGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310430.11
ENST00000518281.5
ENST00000644117.1
ENST00000646522.1
CDS TCA 72 bp AAAGCACTGCAGCAAAGGAGCCTCTCTAGAGTGAAATaGAGTTGGCAACTTATGGTACAATATTATCACATG +
Preference number: 6 (lower is better)
Translates to: KALQQRSLSRVK*SWQLMVQYYHM
Trigger: CATGTGATAATATTGTACCATAAGTTGCCAACTTCATTTCACTCTAGAGAGGCTCCTTTGCTGCAGTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518027.5
CDS CCA 72 bp TCATTTAATCATTACAACAAGCTGGAAAGGAGGTCTTaGAATCCAACTTTTACTACCCATAAGATGCCGCAT +
Preference number: 6 (lower is better)
Translates to: SFNHYNKLERRS*NPTFTTHKMPH
Trigger: ATGCGGCATCTTATGGGTAGTAAAAGTTGGATTCCAAGACCTCCTTTCCAGCTTGTTGTAATGATTAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518635.1