RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000174292

Ensembl transcript IDs: ENST00000570896.5, ENST00000574794.1, ENST00000575268.1, ENST00000576136.1, ENST00000576207.2, ENST00000576716.1, ENST00000576812.5, ENST00000577009.1, ENST00000638332.1, ENST00000639010.1, ENST00000639430.1, ENST00000639433.1, ENST00000639903.1, ENST00000640394.1, ENST00000640398.1, ENST00000640785.1

Found 584 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGCCTCCCTCAGAAGCCCGGCCCCCTCCGATCTCCCTCGGCTGCTaGCCTCCGGATCCGCCCGGCTCAGAGCCCGACCGCCCGCGGACC +
Preference number: 1 (lower is better)
Translates to: KPPSEARPPPISLGC*PPDPPGSEPDRPRT
Trigger: GGTCCGCGGGCGGTCGGGCTCTGAGCCGGGCGGATCCGGAGGGCAGCAGCCGAGGGAGATCGGAGGGGGCCGGGCTTCTGAGGGAGGCTT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR GCA 90 bp TCCAAGCCTCCCTCAGAAGCCCGGCCCCCTCCGATCTCCCTCGGCTaGTGCCCTCCGGATCCGCCCGGCTCAGAGCCCGACCGCCCGCGG +
Preference number: 1 (lower is better)
Translates to: SKPPSEARPPPISLG*CPPDPPGSEPDRPR
Trigger: CCGCGGGCGGTCGGGCTCTGAGCCGGGCGGATCCGGAGGGCAGCAGCCGAGGGAGATCGGAGGGGGCCGGGCTTCTGAGGGAGGCTTGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR GCA 90 bp GAGCAGAGGGGAGGCCTAGGCAGCCGGGCTCTGTCCTCCAGCCGCTaGAGGATGAGGTACGGTGGGACCCCGGCCCAGGGTTCCTCGCCC +
Preference number: 1 (lower is better)
Translates to: EQRGGLGSRALSSSR*RMRYGGTPAQGSSP
Trigger: GGGCGAGGAACCCTGGGCCGGGGTCCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAGAGCCCGGCTGCCTAGGCCTCCCCTCTGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR CCA 90 bp AGGCAGCCGGGCTCTGTCCTCCAGCCGCTGCAGGATGAGGTACGGTaGGACCCCGGCCCAGGGTTCCTCGCCCCCGGAGAACATCTCCCA +
Preference number: 1 (lower is better)
Translates to: RQPGSVLQPLQDEVR*DPGPGFLAPGEHLP
Trigger: TGGGAGATGTTCTCCGGGGGCGAGGAACCCTGGGCCGGGGTCCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAGAGCCCGGCTGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR TCA 90 bp ACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAGCAGCCTaGACCCAGCAGCTCCCCTCTGCAAACAGCACCCTCTGGGATCAG +
Preference number: 1 (lower is better)
Translates to: TGQRPQPSVHHTEAA*TQQLPSANSTLWDQ
Trigger: CTGATCCCAGAGGGTGCTGTTTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
3UTR CCA 90 bp GCCAGTGCCCAACTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTaGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTT +
Preference number: 1 (lower is better)
Translates to: ASAQLWAPPPCAYGR*DLPRWNVYPCRDLV
Trigger: AACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAGTTGGGCACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CCA 90 bp TGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTaGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGT +
Preference number: 1 (lower is better)
Translates to: WAPPPCAYGRWDLPR*NVYPCRDLVLVPLG
Trigger: ACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR GCA 90 bp GCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTaGCAGTGCCCAACTCTGGGCTCCTCCTCCATGTGCCTACGGCAG +
Preference number: 1 (lower is better)
Translates to: ASAFRSQGAWEGGDI*QCPTLGSSSMCLRQ
Trigger: CTGCCGTAGGCACATGGAGGAGGAGCCCAGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CCA 90 bp GGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTaGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGG +
Preference number: 1 (lower is better)
Translates to: GPNEGSLGLYPKSIW*LPSSRMAALQSPVW
Trigger: CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CCA 90 bp CCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATaGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTG +
Preference number: 1 (lower is better)
Translates to: PGPNEGSLGLYPKSI*WLPSSRMAALQSPV
Trigger: CACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CCA 90 bp CAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTaGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGA +
Preference number: 1 (lower is better)
Translates to: QSSSPTMALDQTKAV*AYTPSQYGGFHHPG
Trigger: TCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR TCA 90 bp GGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTaGGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACC +
Preference number: 1 (lower is better)
Translates to: GLVHLIIHTTSIKCP*VQESNRHHPRWPWT
Trigger: GGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR TCA 90 bp CTGCATATGATGTATAGCAGCTCTTTTCTTCCAAGTCCTCTTGTTTaGGAATGTAGTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAG +
Preference number: 1 (lower is better)
Translates to: LHMMYSSSFLPSPLV*ECSGQTRSFLAQPK
Trigger: CTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCACTACATTCTCAAACAAGAGGACTTGGAAGAAAAGAGCTGCTATACATCATATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR GCA 90 bp TACGGTGGGACCCCGGCCCAGGGTTCCTCGCCCCCGGAGAACATCTCCCACAGCATCTCCCTCGGCTGCTaGCCTCCGGATCCGCCCGGC +
Preference number: 2 (lower is better)
Translates to: YGGTPAQGSSPPENISHSISLGC*PPDPPG
Trigger: GCCGGGCGGATCCGGAGGGCAGCAGCCGAGGGAGAT...GCTGTGGGAGATGTTCTCCGGGGGCGAGGAACCCTGGGCCGGGGTCCCACCGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR-3UTR GCA 90 bp GGCCTCTTGCAGCAGCCCCTCCAGGTGGGAAAAGCTAGGCCGGTCGGCAGGGTGATCTCCCTCGGCTGCTaGCCTCCGGATCCGCCCGGC +
Preference number: 2 (lower is better)
Translates to: GLLQQPLQVGKARPVGRVISLGC*PPDPPG
Trigger: GCCGGGCGGATCCGGAGGGCAGCAGCCGAGGGAGAT...CACCCTGCCGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCTGCAAGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR-3UTR GCA 90 bp TCCGAAGGCCCGGCCTCTTGCAGCAGCCCCTCCAGGTGGGAAAAGCTAGGCCGGCCGATCTCCCTCGGCTaGTGCCCTCCGGATCCGCCC +
Preference number: 2 (lower is better)
Translates to: SEGPASCSSPSRWEKLGRPISLG*CPPDPP
Trigger: GGGCGGATCCGGAGGGCAGCAGCCGAGGGAGATCGG...CCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR-3UTR CCA 90 bp GGCCCGGCCTCTTGCAGCAGCCCCTCCAGGTGGGAAAAGCTAGGCCGGTCGGCAGACGAGAAGGCTCCGTaGCGCAGGCTCTCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: GPASCSSPSRWEKLGRSADEKAP*RRLSGA
Trigger: TGCCCCAGAGAGCCTGCGCCACGGAGCCTTCTCGTC...TGCCGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR-3UTR GCA 90 bp ACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAGCAGCCTCTGGCTCAGGGAGGTaGCGTGGGCTGTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: TLATGQRPQPSVHHTEAASGSGR*RGLSEG
Trigger: GCCCTCGGACAGCCCACGGCACCTCCCTGAGCCAGA...GGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
3UTR-3UTR GCA 90 bp GACACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAGCATCTGGCTCAGGGAGGTaGCGTGGGCTGTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: DTLATGQRPQPSVHHTEASGSGR*RGLSEG
Trigger: GCCCTCGGACAGCCCACGGCACCTCCCTGAGCCAGA...TGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
3UTR-3UTR CCA 90 bp TCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGCCGCTTGGTCCCATGTaGCCAGGCCCTCAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: SGLLLHVPTAGGISPGGTPLGPM*PGPQGP
Trigger: AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGG...CGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGCCGCTTGGTCCCATGTaGCCAGGCCCTCAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRPLGPM*PGPQGP
Trigger: AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGG...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR GCA 90 bp GACATCCCTCACACAACATGCTTCCGAAGGCCCGGCCTCTTGCAGCAGCCCCTCCTGTCCTCCAGCCGCTaGAGGATGAGGTACGGTGGG +
Preference number: 2 (lower is better)
Translates to: DIPHTTCFRRPGLLQQPLLSSSR*RMRYGG
Trigger: CCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAG...GAGGGGCTGCTGCAAGAGGCCGGGCCTTCGGAAGCATGTTGTGTGAGGGATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR-3UTR GCA 90 bp TGGGACACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAACCAGCAGCTCCCCTCTaGAAACAGCACCCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: WDTLATGQRPQPSVHHTEPAAPL*KQHPLG
Trigger: TCCCAGAGGGTGCTGTTTGCAGAGGGGAGCTGCTGG...TTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
3UTR-3UTR CCA 90 bp CGCCCCCGGAGAACATCTCCCACAGCGTCACCCCAAACATCCACACGTCCGAGGGTGGCGCAGGCTCTCTaGGGCACACCTAGGAGGATA +
Preference number: 2 (lower is better)
Translates to: RPRRTSPTASPQTSTRPRVAQAL*GTPRRI
Trigger: TATCCTCCTAGGTGTGCCCCAGAGAGCCTGCGCCAC...CCTCGGACGTGTGGATGTTTGGGGTGACGCTGTGGGAGATGTTCTCCGGGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR-3UTR CCA 90 bp CAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACCGCTTGGTCCCATGTaGCCAGGCCCTCAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: QPSEAKEHGREETFASAQPLGPM*PGPQGP
Trigger: AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGG...TTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp CACTGGGACACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGCAAACAGCACCCTCTaGGATCAGACACTTGAGGCC +
Preference number: 2 (lower is better)
Translates to: HWDTLATGQRPQPSVHHTANSTL*DQTLEA
Trigger: GGCCTCAAGTGTCTGATCCCAGAGGGTGCTGTTTGC...GGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTCCCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
3UTR-3UTR CCA 90 bp GACACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAGCAGCAAACAGCACCCTCTaGGATCAGACACTTGAGGCC +
Preference number: 2 (lower is better)
Translates to: DTLATGQRPQPSVHHTEAANSTL*DQTLEA
Trigger: GGCCTCAAGTGTCTGATCCCAGAGGGTGCTGTTTGC...TGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
3UTR-3UTR CCA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCGTCGGGACCTTGTTCTaGTTCCGCTTGGTCCCATGT +
Preference number: 2 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTVGTLF*FRLVPC
Trigger: ACATGGGACCAAGCGGAACCAGAACAAGGTCCCGAC...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CAA 90 bp AGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTaGCCAGTGCCCAACTCTGGGCTCCTCCTCCATGTGCCTACGGCA +
Preference number: 2 (lower is better)
Translates to: SFSLQKPRSMGGRRH*PVPNSGLLLHVPTA
Trigger: TGCCGTAGGCACATGGAGGAGGAGCCCAGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp AGAACATCTCCCACAGCGTCACCCCAAACATCCACACGTCCGAGGCAGACGAGAGTGGCGCAGGCTCTCTaGGGCACACCTAGGAGGATA +
Preference number: 2 (lower is better)
Translates to: RTSPTASPQTSTRPRQTRVAQAL*GTPRRI
Trigger: TATCCTCCTAGGTGTGCCCCAGAGAGCCTGCGCCAC...TCTCGTCTGCCTCGGACGTGTGGATGTTTGGGGTGACGCTGTGGGAGATGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR-3UTR CCA 90 bp CAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAATGTTCTGGTTCCGCTTaGTCCCATGTGGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: QPSEAKEHGREETFASAQCSGSA*SHVARP
Trigger: GGGCCTGGCCACATGGGACCAAGCGGAACCAGAACA...TTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp TCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCATGGGATCTCCCCAGGTaGAACGTCTACCCCTGTCGG +
Preference number: 2 (lower is better)
Translates to: SAFRSQGAWEGGDICQCPWDLPR*NVYPCR
Trigger: CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCA...TGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp GTGGTAGCTGATGGCAGTTCAGGATGGCTGTTCACATGGTCCAGTGTGGCCCCTTGTGCCTACGGCAGGTaGGATCTCCCCAGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: VVADGSSGWLFTWSSVAPCAYGR*DLPRWN
Trigger: GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACA...AGGGGCCACACTGGACCATGTGAACAGCCATCCTGAACTGCCATCAGCTACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR GCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTGGCTCCTCCTCCATGTaGCTACGGCAGGTGGGATCT +
Preference number: 2 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSGSSSM*LRQVGS
Trigger: AGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCC...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTGTTCTGGTTCCGCTTaGTCCCATGTGGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSCSGSA*SHVARP
Trigger: GGGCCTGGCCACATGGGACCAAGCGGAACCAGAACA...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp CTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTTGTGCCTACGGCAGGTaGGATCTCCCCAGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: LQKPRSMGGRRHLPVPNSCAYGR*DLPRWN
Trigger: GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACA...AGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR GCA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGGCTCCTCCTCCATGTaGCTACGGCAGGTGGGATCT +
Preference number: 2 (lower is better)
Translates to: LSAREQSSSPTMALDQTKGSSSM*LRQVGS
Trigger: AGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCC...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR GCA 90 bp AAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGCCAGGATGGCTGCCCTaGAGAGTCCAGTGTGGTAGC +
Preference number: 2 (lower is better)
Translates to: KRAIVITHDGPGPNEGSLPGWLP*RVQCGS
Trigger: GCTACCACACTGGACTCTGCAGGGCAGCCATCCTGG...CAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTTGGGATCTCCCCAGGTaGAACGTCTACCCCTGTCGG +
Preference number: 2 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFWDLPR*NVYPCR
Trigger: CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCA...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp CTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGTGTGCCTACGGCAGGTaGGATCTCCCCAGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: LYPKSIWWLPSSRMAALQCAYGR*DLPRWN
Trigger: GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACA...CTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp AGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTTGTGCCTACGGCAGGTaGGATCTCCCCAGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: SQYGGFHHPGWLPCRVQCCAYGR*DLPRWN
Trigger: GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACA...ACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR TCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTGTCCAGTGTGGTAGCTaGTGGCAGTTCAGGATGGCT +
Preference number: 2 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSVQCGS*WQFRMA
Trigger: AGCCATCCTGAACTGCCATCAGCTACCACACTGGAC...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR GCA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGGCCTAGGCTTTTCATaGTGGTGTCTGTGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMGLGFS*WCLCPQ
Trigger: CTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCC...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR GCA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGAGGCTCCTCCTCCATGTaGCTACGGCAGGTGGGATCT +
Preference number: 2 (lower is better)
Translates to: SNVLECKRAIVITHDGPGGSSSM*LRQVGS
Trigger: AGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCC...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp TCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCCGCTTGGTCCCATGTaGCCAGGCCCTCAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: SILPASNVLECKRAIVITPLGPM*PGPQGP
Trigger: AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGG...GGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp GAGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGTCGGGACCTTGTTCTaGTTCCGCTTGGTCCCATGT +
Preference number: 2 (lower is better)
Translates to: ELQPSEAKEHGREETFASVGTLF*FRLVPC
Trigger: ACATGGGACCAAGCGGAACCAGAACAAGGTCCCGAC...ACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCGATGGCAGTTCAGGATaGCTGTTCACATGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: EQSSSPTMALDQTKAVWADGSSG*LFTWSS
Trigger: ACTGGACCATGTGAACAGCCATCCTGAACTGCCATC...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CAA 90 bp GCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTaGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGG +
Preference number: 2 (lower is better)
Translates to: AIVITHDGPGPNEGS*GLYPKSIWWLPSSR
Trigger: CCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp TCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGAGAAGCCAAGGAGCATaGGAGGGAGGAGACATTTGC +
Preference number: 2 (lower is better)
Translates to: SIWWLPSSRMAALQSPVWRSQGA*EGGDIC
Trigger: GCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCT...CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR GCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGCCAGGATGGCTGCCCTaGAGAGTCCAGTGTGGTAGC +
Preference number: 2 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMPGWLP*RVQCGS
Trigger: GCTACCACACTGGACTCTGCAGGGCAGCCATCCTGG...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTGATGGCAGTTCAGGATaGCTGTTCACATGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSDGSSG*LFTWSS
Trigger: ACTGGACCATGTGAACAGCCATCCTGAACTGCCATC...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR TCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTCCAAGTCCTCTTGTTTaGGAATGTAGTGGGCAGACT +
Preference number: 2 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSPSPLV*ECSGQT
Trigger: AGTCTGCCCACTACATTCTCAAACAAGAGGACTTGG...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp CTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCTAGGCTTTTCATGCTaGTGTCTGTGCCCGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LDQTKAVWAYTPSQYGGFLGFSC*CLCPQK
Trigger: CTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAG...GAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CAA 90 bp GGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTaGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: GASPSHNPYYQHQMS*SAREQSSSPTMALD
Trigger: GTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR TCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTCCAAGTCCTCTTGTTTaGGAATGTAGTGGGCAGACT +
Preference number: 2 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFPSPLV*ECSGQT
Trigger: AGTCTGCCCACTACATTCTCAAACAAGAGGACTTGG...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR TCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGTCCAGTGTGGTAGCTaGTGGCAGTTCAGGATGGCT +
Preference number: 2 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMVQCGS*WQFRMA
Trigger: AGCCATCCTGAACTGCCATCAGCTACCACACTGGAC...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGCAAACGAAGGCAGTTTaGGCCTATACCCCAAGTCAA +
Preference number: 2 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMQTKAV*AYTPSQ
Trigger: TTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTG...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CCA 90 bp GCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGACTAGGCTTTTCATGCTaGTGTCTGTGCCCGCAGAAG +
Preference number: 2 (lower is better)
Translates to: ASPSHNPYYQHQMSLSARLGFSC*CLCPQK
Trigger: CTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAG...TCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR GCA 72 bp TCAGAAGCCCGGCCCCCTCCGATCTCCCTCGGCTGCTaGCCTCCGGATCCGCCCGGCTCAGAGCCCGACCGC +
Preference number: 3 (lower is better)
Translates to: SEARPPPISLGC*PPDPPGSEPDR
Trigger: GCGGTCGGGCTCTGAGCCGGGCGGATCCGGAGGGCAGCAGCCGAGGGAGATCGGAGGGGGCCGGGCTTCTGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR GCA 72 bp CCCTCAGAAGCCCGGCCCCCTCCGATCTCCCTCGGCTaGTGCCCTCCGGATCCGCCCGGCTCAGAGCCCGAC +
Preference number: 3 (lower is better)
Translates to: PSEARPPPISLG*CPPDPPGSEPD
Trigger: GTCGGGCTCTGAGCCGGGCGGATCCGGAGGGCAGCAGCCGAGGGAGATCGGAGGGGGCCGGGCTTCTGAGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR GCA 72 bp GGAGGCCTAGGCAGCCGGGCTCTGTCCTCCAGCCGCTaGAGGATGAGGTACGGTGGGACCCCGGCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: GGLGSRALSSSR*RMRYGGTPAQG
Trigger: ACCCTGGGCCGGGGTCCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAGAGCCCGGCTGCCTAGGCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR CCA 72 bp GGCTCTGTCCTCCAGCCGCTGCAGGATGAGGTACGGTaGGACCCCGGCCCAGGGTTCCTCGCCCCCGGAGAA +
Preference number: 3 (lower is better)
Translates to: GSVLQPLQDEVR*DPGPGFLAPGE
Trigger: TTCTCCGGGGGCGAGGAACCCTGGGCCGGGGTCCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR GCA 72 bp CAGGGCGCCTGGTTCTGTGACATCCCTCACACAACATaGTTCCGAAGGCCCGGCCTCTTGCAGCAGCCCCTC +
Preference number: 3 (lower is better)
Translates to: QGAWFCDIPHTT*FRRPGLLQQPL
Trigger: GAGGGGCTGCTGCAAGAGGCCGGGCCTTCGGAAGCATGTTGTGTGAGGGATGTCACAGAACCAGGCGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
3UTR CCA 72 bp CCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTaGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGG +
Preference number: 3 (lower is better)
Translates to: PGGTSTPVGTLF*FRLVPCGQALR
Trigger: CCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CCA 72 bp CAACTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTaGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGG +
Preference number: 3 (lower is better)
Translates to: QLWAPPPCAYGR*DLPRWNVYPCR
Trigger: CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CCA 72 bp CCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTaGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTT +
Preference number: 3 (lower is better)
Translates to: PPCAYGRWDLPR*NVYPCRDLVLV
Trigger: AACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CAA 90 bp GTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCAGAAGTTGTTCTGGTTCCGCTaGGTCCCATGTGGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: VGRLDPSWPSQRSFSLQKLFWFR*VPCGQA
Trigger: GGCCTGGCCACATGGGACCAAGCGGAACCAGAACAA...CTTCTGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CAA 90 bp CAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACTTGTTCTGGTTCCGCTaGGTCCCATGTGGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: QMSLSAREQSSSPTMALDLFWFR*VPCGQA
Trigger: GGCCTGGCCACATGGGACCAAGCGGAACCAGAACAA...GTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CCA 72 bp GCCAAAGGAGCTTCAGCCTTCAGAAGCCAAGGAGCATaGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTG +
Preference number: 3 (lower is better)
Translates to: AKGASAFRSQGA*EGGDICQCPTL
Trigger: CAGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTCCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CAA 90 bp GGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGTTGTTCTGGTTCCGCTaGGTCCCATGTGGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: GSLGLYPKSIWWLPSSRMLFWFR*VPCGQA
Trigger: GGCCTGGCCACATGGGACCAAGCGGAACCAGAACAA...CATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CCA 72 bp GTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTaGACCAAACGAAGGCAGTTTGGGCCTATACCCCAA +
Preference number: 3 (lower is better)
Translates to: VQESNRHHPRWP*TKRRQFGPIPQ
Trigger: TTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CAA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCATTGTTCTGGTTCCGCTaGGTCCCATGTGGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPLFWFR*VPCGQA
Trigger: GGCCTGGCCACATGGGACCAAGCGGAACCAGAACAA...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR TCA 72 bp TCAGGATGGCTGTTCACATGGTCCAGTGTGGCCCCTTaGTCCTCTCTAGCGCGTAGAAGCTTCCTCTGCATA +
Preference number: 3 (lower is better)
Translates to: SGWLFTWSSVAP*SSLARRSFLCI
Trigger: TATGCAGAGGAAGCTTCTACGCGCTAGAGAGGATCAAGGGGCCACACTGGACCATGTGAACAGCCATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CCA 72 bp GAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTaGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGT +
Preference number: 3 (lower is better)
Translates to: EGSLGLYPKSIW*LPSSRMAALQS
Trigger: ACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CCA 72 bp TCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTaGGCCTATACCCCAAGTCAATATGGTGGCTTCCAT +
Preference number: 3 (lower is better)
Translates to: SPTMALDQTKAV*AYTPSQYGGFH
Trigger: ATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CAA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACAGACTAGATCCTTCTaGGCCCAGCCAAAGGAGCTT +
Preference number: 3 (lower is better)
Translates to: SNVLECKRAIVITHDGPGQTRSF*AQPKEL
Trigger: AAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTG...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR-3UTR CAA 90 bp GCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAACCCCTGTCGGGACCTaGTTCTGGTTCCGCTTGGTC +
Preference number: 3 (lower is better)
Translates to: ASPSHNPYYQHQMSLSARTPVGT*FWFRLV
Trigger: GACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGT...TCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR TCA 72 bp CATCTCATAATCCATACTACCAGCATCAAATGTCCTTaGGTGCAAGAGAGCAATCGTCATCACCCACGATGG +
Preference number: 3 (lower is better)
Translates to: HLIIHTTSIKCP*VQESNRHHPRW
Trigger: CCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR TCA 72 bp ATGTATAGCAGCTCTTTTCTTCCAAGTCCTCTTGTTTaGGAATGTAGTGGGCAGACTAGATCCTTCTTGGCC +
Preference number: 3 (lower is better)
Translates to: MYSSSFLPSPLV*ECSGQTRSFLA
Trigger: GGCCAAGAAGGATCTAGTCTGCCCACTACATTCTCAAACAAGAGGACTTGGAAGAAAAGAGCTGCTATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp AGGTACGGTGGGACCCCGGCCCAGGGTTCCTCGCCCCCGGAGAACATCTCCCACCCGATCTCCCTCGGCTaGTGCCCTCCGGATCCGCCC +
Preference number: 4 (lower is better)
Translates to: RYGGTPAQGSSPPENISHPISLG*CPPDPP
Trigger: GGGCGGATCCGGAGGGCAGCAGCCGAGGGAGATCGG...GTGGGAGATGTTCTCCGGGGGCGAGGAACCCTGGGCCGGGGTCCCACCGTACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR TCA 90 bp TTCTGGTCCAAGCCTCCCTCAGAAGCCCGGCCCCCTCCGATCTCCCTCGGCTGCCCAGCCGCTGCAGGATaGGGTACGGTGGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: FWSKPPSEARPPPISLGCPAAAG*GTVGPR
Trigger: CCGGGGTCCCACCGTACCTCATCCTGCAGCGGCTGG...GCAGCCGAGGGAGATCGGAGGGGGCCGGGCTTCTGAGGGAGGCTTGGACCAGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR GCA 90 bp GTACGGTGGGACCCCGGCCCAGGGTTCCTCGCCCCCGGAGAACATCTCCCACAGGAAGGCCCGGCCTCTTaGAGCAGCCCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VRWDPGPGFLAPGEHLPQEGPAS*SSPSRW
Trigger: CCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTC...CTGTGGGAGATGTTCTCCGGGGGCGAGGAACCCTGGGCCGGGGTCCCACCGTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR TCA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCCCAGCCGCTGCAGGATaGGGTACGGTGGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTPAAAG*GTVGPR
Trigger: CCGGGGTCCCACCGTACCTCATCCTGCAGCGGCTGG...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCGGCGGAAGCGGCGACTaGGGAACCTCCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTGGSGD*GTSQAA
Trigger: GGCAGCCTGGGAGGTTCCGCAGTCGCCGCTTCCGCC...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CGATCTCCCTCGGCTGCTGCCCTCCGGATCCGCCCGGCTCAGAGCCCGACCGCCATCCCTCACACAACATaGTTCCGAAGGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSPSAAALRIRPAQSPTAIPHTT*FRRPGL
Trigger: GAGGCCGGGCCTTCGGAAGCATGTTGTGTGAGGGAT...GGCGGTCGGGCTCTGAGCCGGGCGGATCCGGAGGGCAGCAGCCGAGGGAGATCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR GCA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGGCGGAAGCGGCGACTaGGGAACCTCCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRGGSGD*GTSQAA
Trigger: GGCAGCCTGGGAGGTTCCGCAGTCGCCGCTTCCGCC...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTGCCGTTAGGCGCGCGTaGAGGGAGCCCAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLAVRRA*REPSGA
Trigger: GGCGCCACTGGGCTCCCTGCACGCGCGCCTAACGGC...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CGCCCCCGGAGAACATCTCCCACAGCGTCACCCCAAACATCCACACGTCCGAGGATCTCCCTCGGCTGCTaGCCTCCGGATCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RPRRTSPTASPQTSTRPRISLGC*PPDPPG
Trigger: GCCGGGCGGATCCGGAGGGCAGCAGCCGAGGGAGAT...CCTCGGACGTGTGGATGTTTGGGGTGACGCTGTGGGAGATGTTCTCCGGGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR CCA 90 bp CGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTGCAGGGGTGCCTCTGTaGACTGGACGGGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RDLVLVPLGPMWPGPQGPAGVPL*TGRVAG
Trigger: GCCAGCCACCCGTCCAGTCCACAGAGGCACCCCTGC...AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCCCGCTTGGTCCCATGTaGCCAGGCCCTCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTPLGPM*PGPQGP
Trigger: AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGG...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp ACGGTGGGACCCCGGCCCAGGGTTCCTCGCCCCCGGAGAACATCTCCCACAGCGGTGGCGCAGGCTCTCTaGGGCACACCTAGGAGGATA +
Preference number: 4 (lower is better)
Translates to: TVGPRPRVPRPRRTSPTAVAQAL*GTPRRI
Trigger: TATCCTCCTAGGTGTGCCCCAGAGAGCCTGCGCCAC...CGCTGTGGGAGATGTTCTCCGGGGGCGAGGAACCCTGGGCCGGGGTCCCACCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR TCA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCCGAAGTCAGCCACCTTaGTGGTGCGCGGCGACGCCA +
Preference number: 4 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTRSQPP*WCAATP
Trigger: TGGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCG...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GGCCCTCAGGGGCCTAGGCTTTTCATGCTGGTGTCTGTGCCCGCAGAAGCTGAGCCAGCCGCTGCAGGATaGGGTACGGTGGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: GPQGPRLFMLVSVPAEAEPAAAG*GTVGPR
Trigger: CCGGGGTCCCACCGTACCTCATCCTGCAGCGGCTGG...CTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCCCCTGAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CCTTCTGGTCCAAGCCTCCCTCAGAAGCCCGGCCCCCTCCGATCTCCCTCGGCTCTGTCCTCCAGCCGCTaGAGGATGAGGTACGGTGGG +
Preference number: 4 (lower is better)
Translates to: PSGPSLPQKPGPLRSPSALSSSR*RMRYGG
Trigger: CCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAG...AGCCGAGGGAGATCGGAGGGGGCCGGGCTTCTGAGGGAGGCTTGGACCAGAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR GCA 90 bp TCCGAAGGCCCGGCCTCTTGCAGCAGCCCCTCCAGGTGGGAAAAGCTAGGCCGGCTGTCCTCCAGCCGCTaGAGGATGAGGTACGGTGGG +
Preference number: 4 (lower is better)
Translates to: SEGPASCSSPSRWEKLGRLSSSR*RMRYGG
Trigger: CCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAG...CCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR GCA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGAAGGCCCGGCCTCTTaGAGCAGCCCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNEGPAS*SSPSRW
Trigger: CCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTC...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTCCGCTTGGTCCCATGTaGCCAGGCCCTCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSPLGPM*PGPQGP
Trigger: AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGG...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TACGGTGGGACCCCGGCCCAGGGTTCCTCGCCCCCGGAGAACATCTCCCACAGCGTGGCGCAGGCTCTCTaGGGCACACCTAGGAGGATA +
Preference number: 4 (lower is better)
Translates to: YGGTPAQGSSPPENISHSVAQAL*GTPRRI
Trigger: TATCCTCCTAGGTGTGCCCCAGAGAGCCTGCGCCAC...GCTGTGGGAGATGTTCTCCGGGGGCGAGGAACCCTGGGCCGGGGTCCCACCGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR TCA 90 bp AGGGTTCCTCGCCCCCGGAGAACATCTCCCACAGCGTCACCCCAAACATCCACACCAGCCGCTGCAGGATaGGGTACGGTGGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: RVPRPRRTSPTASPQTSTPAAAG*GTVGPR
Trigger: CCGGGGTCCCACCGTACCTCATCCTGCAGCGGCTGG...TGTGGATGTTTGGGGTGACGCTGTGGGAGATGTTCTCCGGGGGCGAGGAACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR GCA 90 bp GCCCTCGGTGCACCACACCGAAGCAGCCTGAACCCAGCAGCTCCCCTCTGCAAAGCCGGCCCATGCCAATaGCGTCCAGGTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: ALGAPHRSSLNPAAPLCKAGPCQ*RPGPQA
Trigger: AGCCTGAGGACCTGGACGGCATTGGCATGGGCCGGC...TTTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGCCGGCCCATGCCAATaGCGTCCAGGTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRAGPCQ*RPGPQA
Trigger: AGCCTGAGGACCTGGACGGCATTGGCATGGGCCGGC...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGCCGGCCCATGCCAATaGCGTCCAGGTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNAGPCQ*RPGPQA
Trigger: AGCCTGAGGACCTGGACGGCATTGGCATGGGCCGGC...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCTCTGGCTCAGGGAGGTaGCGTGGGCTGTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: VYPCRDLVLVPLGPMWPGSGSGR*RGLSEG
Trigger: GCCCTCGGACAGCCCACGGCACCTCCCTGAGCCAGA...GCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CGGTGCACCACACCGAAGCAGCCTGAACCCAGCAGCTCCCCTCTGCAAACAGCATCTGGCTCAGGGAGGTaGCGTGGGCTGTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: RCTTPKQPEPSSSPLQTASGSGR*RGLSEG
Trigger: GCCCTCGGACAGCCCACGGCACCTCCCTGAGCCAGA...TGCTGTTTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCGTCCACAGCCCTCGGTaGACCACACCGAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTVHSPR*TTPKQP
Trigger: AGGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGAC...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CGGTGCACCACACCGAAGCAGCCTGAACCCAGCAGCTCCCCTCTGCAAACAGCAGGGCAGGCCGGCCCATaGCAATGCCGTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RCTTPKQPEPSSSPLQTAGQAGP*QCRPGP
Trigger: AGGACCTGGACGGCATTGGCATGGGCCGGCCTGCCC...TGCTGTTTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTGAGCTTCGGACAGTCTaGGCTGGGCAGGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLELRTV*AGQAGP
Trigger: TGGGCCGGCCTGCCCAGCGCAGACTGTCCGAAGCTC...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTCCTCTGGCCCCGTaGTGGGGGCGCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTPPLAP*WGRIPK
Trigger: CTTTGGGATGCGCCCCCAGCACGGGGCCAGAGGAGG...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCACCTCCCAGGCTGCCTaGGCTAAATCCGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTTSQAA*AKSEEA
Trigger: CGCCTCCTCGGATTTAGCCCAGGCAGCCTGGGAGGT...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CCCCAAACATCCACACGTCCGAGGCAGACGAGAAGGCTCCGTGGCGCAGGCTCTGACGAGAAGGCTCCGTaGCGCAGGCTCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PQTSTRPRQTRRLRGAGSDEKAP*RRLSGA
Trigger: TGCCCCAGAGAGCCTGCGCCACGGAGCCTTCTCGTC...AGAGCCTGCGCCACGGAGCCTTCTCGTCTGCCTCGGACGTGTGGATGTTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR CCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTCAGGATGAGGTACGGTaGGACCCCGGCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSQDEVR*DPGPGF
Trigger: GAACCCTGGGCCGGGGTCCCACCGTACCTCATCCTG...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CCCCAAACATCCACACGTCCGAGGCAGACGAGAAGGCTCCGTGGCGCAGGCTCTCAGGATGAGGTACGGTaGGACCCCGGCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PQTSTRPRQTRRLRGAGSQDEVR*DPGPGF
Trigger: GAACCCTGGGCCGGGGTCCCACCGTACCTCATCCTG...AGAGCCTGCGCCACGGAGCCTTCTCGTCTGCCTCGGACGTGTGGATGTTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR CCA 90 bp GGCCCGGCCTCTTGCAGCAGCCCCTCCAGGTGGGAAAAGCTAGGCCGGTCGGCACATCCTCAGGGCGCCTaGTTCTGTGACATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GPASCSSPSRWEKLGRSAHPQGA*FCDIPH
Trigger: GTGAGGGATGTCACAGAACCAGGCGCCCTGAGGATG...TGCCGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR CCA 90 bp TCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGGGTGCCTCTGTGGACTaGACGGGTGGCTGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SGLLLHVPTAGGISPGGTGASVD*TGGWQA
Trigger: GGCTTGCCAGCCACCCGTCCAGTCCACAGAGGCACC...CGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp TCCGAAGGCCCGGCCTCTTGCAGCAGCCCCTCCAGGTGGGAAAAGCTAGGCCGGGGGCGCCTGGTTCTGTaGCATCCCTCACACAACATG +
Preference number: 4 (lower is better)
Translates to: SEGPASCSSPSRWEKLGRGRLVL*HPSHNM
Trigger: CATGTTGTGTGAGGGATGTCACAGAACCAGGCGCCC...CCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR GCA 90 bp CTCGGTGCACCACACCGAAGCAGCCTGAACCCAGCAGCTCCCCTCTGCAAACAGGCCGGCCCATGCCAATaGCGTCCAGGTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LGAPHRSSLNPAAPLCKQAGPCQ*RPGPQA
Trigger: AGCCTGAGGACCTGGACGGCATTGGCATGGGCCGGC...CTGTTTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCCCAGCAGCTCCCCTCTaGAAACAGCACCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTPAAPL*KQHPLG
Trigger: TCCCAGAGGGTGCTGTTTGCAGAGGGGAGCTGCTGG...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp ACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAGCAGCCCCAGCAGCTCCCCTCTaGAAACAGCACCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TLATGQRPQPSVHHTEAAPAAPL*KQHPLG
Trigger: TCCCAGAGGGTGCTGTTTGCAGAGGGGAGCTGCTGG...GGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp GCCCTCGGTGCACCACACCGAAGCAGCCTGAACCCAGCAGCTCCCCTCTGCAAAGTCCACAGCCCTCGGTaGACCACACCGAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALGAPHRSSLNPAAPLCKVHSPR*TTPKQP
Trigger: AGGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGAC...TTTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp ACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAGCAGCCCCACTGGGACACTCTTaGCACTGGGCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: TLATGQRPQPSVHHTEAAPLGHS*HWAAST
Trigger: TGTGGACGCTGCCCAGTGGCAAGAGTGTCCCAGTGG...GGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp CACTGGGACACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCCCACTGGGACACTCTTaGCACTGGGCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: HWDTLATGQRPQPSVHHTPLGHS*HWAAST
Trigger: TGTGGACGCTGCCCAGTGGCAAGAGTGTCCCAGTGG...GGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTCCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTAGTCCCCCAGTTCTGTaGCCATCGGGCCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSSPPVL*PSGLRD
Trigger: GTCCCGAAGGCCCGATGGGCACAGAACTGGGGGACT...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGCCCAGTACAAGGCCGTaGAGACGCAGCACGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRPSTRP*RRSTCG
Trigger: CCCACACGTGCTGCGTCTGCACGGCCTTGTACTGGG...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTATGGCTCCCGCCAGCTaGCGCAGGAAGAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RQVGSPQVERLPLSGPCSMAPAS*RRKRQS
Trigger: GCTCTGCCTCTTCCTGCGGCAGCTGGCGGGAGCCAT...AGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GTGGTAGCTGATGGCAGTTCAGGATGGCTGTTCACATGGTCCAGTGTGGCCCCTGTAGCGAGGTCTCGGTaGACCAGCCCGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: VVADGSSGWLFTWSSVAPVARSR*TSPRAP
Trigger: GGGGGCCCGCGGGCTGGTGCACCGAGACCTCGCTAC...AGGGGCCACACTGGACCATGTGAACAGCCATCCTGAACTGCCATCAGCTACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTGAAGGCCCGGCCTCTTaGAGCAGCCCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSPQVERLPLSGPCSGSAEGPAS*SSPSRW
Trigger: CCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTC...AGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp AGGGTTCCTCGCCCCCGGAGAACATCTCCCACAGCGTCACCCCAAACATCCACAGAAGGCCCGGCCTCTTaGAGCAGCCCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RVPRPRRTSPTASPQTSTEGPAS*SSPSRW
Trigger: CCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTC...TGTGGATGTTTGGGGTGACGCTGTGGGAGATGTTCTCCGGGGGCGAGGAACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR GCA 90 bp CGAAGGCCCGGCCTCTTGCAGCAGCCCCTCCAGGTGGGAAAAGCTAGGCCGGTCATCCCTCACACAACATaGTTCCGAAGGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: RRPGLLQQPLQVGKARPVIPHTT*FRRPGL
Trigger: GAGGCCGGGCCTTCGGAAGCATGTTGTGTGAGGGAT...GACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR GCA 90 bp TGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCTCCCCGGGCAGGGGTaGCTCTGTGGACTGGACGGG +
Preference number: 4 (lower is better)
Translates to: WNVYPCRDLVLVPLGPMWLPGQG*LCGLDG
Trigger: CCCGTCCAGTCCACAGAGGCACCCCTGCCCGGGGAG...CCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp ACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAGCAGCCTCGGACAGTCTGCGCTaGGCTGTGGGAGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: TLATGQRPQPSVHHTEAASDSLR*AVGGQN
Trigger: ATTCTGGCCTCCCACAGCCCAGCGCAGACTGTCCGA...GGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR CCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTGGACACTCTTGCCACTaGGCAGCGTCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSGHSCH*AASTAL
Trigger: GAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTCC...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GACACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAGCAGGACACTCTTGCCACTaGGCAGCGTCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: DTLATGQRPQPSVHHTEAGHSCH*AASTAL
Trigger: GAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTCC...TGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR CCA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGGACACTCTTGCCACTaGGCAGCGTCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNGHSCH*AASTAL
Trigger: GAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTCC...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AGGGCGCCTGGTTCTGTGACATCCCTCACACAACATGCTTCCGAAGGCCCGGCCGACGAGAAGGCTCCGTaGCGCAGGCTCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RAPGSVTSLTQHASEGPADEKAP*RRLSGA
Trigger: TGCCCCAGAGAGCCTGCGCCACGGAGCCTTCTCGTC...GGCCGGGCCTTCGGAAGCATGTTGTGTGAGGGATGTCACAGAACCAGGCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR CCA 90 bp CGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTCAGGATGAGGTACGGTaGGACCCCGGCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: RQVGSPQVERLPLSGPCSQDEVR*DPGPGF
Trigger: GAACCCTGGGCCGGGGTCCCACCGTACCTCATCCTG...AGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGAGCAGCCCCTCCAGGTaGGAAAAGCTAGGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: SGLLLHVPTAGGISPGGTSSPSR*EKLGRS
Trigger: CGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCT...CGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTCCTCTGGCCCCGTGCTaGGGGCGCATCCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSPLAPC*GRIPKI
Trigger: AATCTTTGGGATGCGCCCCCAGCACGGGGCCAGAGG...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCGCGTGGAGGCAGGCCTaGAGGTCCCTGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: EQSSSPTMALDQTKAVWAAWRQA*RSLGHS
Trigger: GCTGTGCCCCAGGGACCTCCAGGCCTGCCTCCACGC...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGGGCCCTTCCAGATTGTaGAGTCGGGGCTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: SGLLLHVPTAGGISPGGTGPSRL*SRGCPR
Trigger: TCGAGGGCAGCCCCGACTCCACAATCTGGAAGGGCC...CGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR TCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTCTACCCGGAGGGACTTaGCAGCCACTGGGACACTCT +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSLPGGT*QPLGHS
Trigger: AGAGTGTCCCAGTGGCTGTCAAGTCCCTCCGGGTAG...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTGGGCGCCTGGTTCTGTaGCATCCCTCACACAACATG +
Preference number: 4 (lower is better)
Translates to: RDLVLVPLGPMWPGPQGPGRLVL*HPSHNM
Trigger: CATGTTGTGTGAGGGATGTCACAGAACCAGGCGCCC...AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCGGAAGCTGCCCACTTTaGAGGTGCGACCATTCTGGC +
Preference number: 4 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTGSCPL*RCDHSG
Trigger: GCCAGAATGGTCGCACCTTCAAAGTGGGCAGCTTCC...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCATGCTTCCTGGGTGTTaGTCTCCCCGGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTMLPGC*SPRAGV
Trigger: CACCCCTGCCCGGGGAGATCAACACCCAGGAAGCAT...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTGGCACTCCTGGTGGGTaGCCCCATGCACACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLGTPGG*PHAHSA
Trigger: AGCTGAGTGTGCATGGGGTCACCCACCAGGAGTGCC...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GTGGTAGCTGATGGCAGTTCAGGATGGCTGTTCACATGGTCCAGTGTGGCCCCTGGCGGAAGCGGCGACTaGGGAACCTCCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VVADGSSGWLFTWSSVAPGGSGD*GTSQAA
Trigger: GGCAGCCTGGGAGGTTCCGCAGTCGCCGCTTCCGCC...AGGGGCCACACTGGACCATGTGAACAGCCATCCTGAACTGCCATCAGCTACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GACACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAGCACCAGCAGCTCCCCTCTaGAAACAGCACCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: DTLATGQRPQPSVHHTEAPAAPL*KQHPLG
Trigger: TCCCAGAGGGTGCTGTTTGCAGAGGGGAGCTGCTGG...TGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp CGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGTCCACAGCCCTCGGTaGACCACACCGAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RQVGSPQVERLPLSGPCSVHSPR*TTPKQP
Trigger: AGGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGAC...AGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTCGGTGCACCACACCGAAGCAGCCTGAACCCAGCAGCTCCCCTCTGCAAACAGGTCCACAGCCCTCGGTaGACCACACCGAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGAPHRSSLNPAAPLCKQVHSPR*TTPKQP
Trigger: AGGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGAC...CTGTTTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCGAGCTTCGGACAGTCTaGGCTGGGCAGGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: EQSSSPTMALDQTKAVWAELRTV*AGQAGP
Trigger: TGGGCCGGCCTGCCCAGCGCAGACTGTCCGAAGCTC...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GGCCCTCAGGGGCCTAGGCTTTTCATGCTGGTGTCTGTGCCCGCAGAAGCTGAGAGTCCCCCAGTTCTGTaGCCATCGGGCCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: GPQGPRLFMLVSVPAEAESPPVL*PSGLRD
Trigger: GTCCCGAAGGCCCGATGGGCACAGAACTGGGGGACT...CTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCCCCTGAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCCCCAGTACAAGGCCGTaGAGACGCAGCACGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PRWNVYPCRDLVLVPLGPPSTRP*RRSTCG
Trigger: CCCACACGTGCTGCGTCTGCACGGCCTTGTACTGGG...GGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GAGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCGTTAGGCGCGCGTaGAGGGAGCCCAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: ELQPSEAKEHGREETFASAVRRA*REPSGA
Trigger: GGCGCCACTGGGCTCCCTGCACGCGCGCCTAACGGC...ACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTGTAGCGAGGTCTCGGTaGACCAGCCCGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LQKPRSMGGRRHLPVPNSVARSR*TSPRAP
Trigger: GGGGGCCCGCGGGCTGGTGCACCGAGACCTCGCTAC...AGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGGAAGGCCCGGCCTCTTaGAGCAGCCCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: WNVYPCRDLVLVPLGPMWEGPAS*SSPSRW
Trigger: CCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTC...CCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCCCTCCTCTGGCCCCGTaGTGGGGGCGCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: EQSSSPTMALDQTKAVWAPPLAP*WGRIPK
Trigger: CTTTGGGATGCGCCCCCAGCACGGGGCCAGAGGAGG...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGGCTCCTCCTCCATGTaGCTACGGCAGGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRGSSSM*LRQVGS
Trigger: AGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCC...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GACACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAGCATCGGACAGTCTGCGCTaGGCTGTGGGAGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: DTLATGQRPQPSVHHTEASDSLR*AVGGQN
Trigger: ATTCTGGCCTCCCACAGCCCAGCGCAGACTGTCCGA...TGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR CCA 90 bp GTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCGGACACTCTTGCCACTaGGCAGCGTCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VYPCRDLVLVPLGPMWPGGHSCH*AASTAL
Trigger: GAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTCC...GCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTCGGTGCACCACACCGAAGCAGCCTGAACCCAGCAGCTCCCCTCTGCAAACAGGGACACTCTTGCCACTaGGCAGCGTCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGAPHRSSLNPAAPLCKQGHSCH*AASTAL
Trigger: GAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTCC...CTGTTTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR CCA 90 bp GTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCGTGCAGGGAGCCCAGTaGCGCCAGCTCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: VYPCRDLVLVPLGPMWPGVQGAQ*RQLHHH
Trigger: ATGGTGATGGAGCTGGCGCCACTGGGCTCCCTGCAC...GCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCGCAGGCTCTCTGGGGCACACCTAGGAGGATAACCCTTCTGGTCCAAGCCTCCAGCAGCCCCTCCAGGTaGGAAAAGCTAGGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: AQALWGTPRRITLLVQASSSPSR*EKLGRS
Trigger: CGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCT...GGAGGCTTGGACCAGAAGGGTTATCCTCCTAGGTGTGCCCCAGAGAGCCTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR CCA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCCGTCACTGCCGAGGCTaGGAAGCTGCCCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTRHCRG*EAAHFE
Trigger: TTCAAAGTGGGCAGCTTCCCAGCCTCGGCAGTGACG...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCCCTCTGGCCCCGTGCTaGGGGCGCATCCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: PRWNVYPCRDLVLVPLGPPLAPC*GRIPKI
Trigger: AATCTTTGGGATGCGCCCCCAGCACGGGGCCAGAGG...GGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTTGAACCACCCCCTGTaGGACGAGGACCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: SGLLLHVPTAGGISPGGTLNHPL*DEDRGT
Trigger: TGTCCCTCGGTCCTCGTCCCACAGGGGGTGGTTCAA...CGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGCCCTCAGGGGCCTAGGCTTTTCATGCTGGTGTCTGTGCCCGCAGAAGCTGAGAGGCCTGGAGGTCCCTaGGGCACAGCTCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GPQGPRLFMLVSVPAEAERPGGP*GTALAC
Trigger: ACAAGCCAGAGCTGTGCCCCAGGGACCTCCAGGCCT...CTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCCCCTGAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCAGGCCTGGAGGTCCCTaGGGCACAGCTCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTRPGGP*GTALAC
Trigger: ACAAGCCAGAGCTGTGCCCCAGGGACCTCCAGGCCT...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATCCGCTTGGTCCCATGTaGCCAGGCCCTCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QVERLPLSGPCSGSAWSHPLGPM*PGPQGP
Trigger: AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGG...ATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTTGTTCTGGTTCCGCTTaGTCCCATGTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSCSGSA*SHVARP
Trigger: GGGCCTGGCCACATGGGACCAAGCGGAACCAGAACA...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACTGGGATCTCCCCAGGTaGAACGTCTACCCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNWDLPR*NVYPCR
Trigger: CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCA...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGGGCGCCTGGTTCTGTaGCATCCCTCACACAACATG +
Preference number: 4 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNGRLVL*HPSHNM
Trigger: CATGTTGTGTGAGGGATGTCACAGAACCAGGCGCCC...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGAGGGCTGGCTGGGCTaGGGAGAGCTAGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNEGWLG*GELEDK
Trigger: TTTATCCTCTAGCTCTCCTCAGCCCAGCCAGCCCTC...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTGAGGGCTGGCTGGGCTaGGGAGAGCTAGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSEGWLG*GELEDK
Trigger: TTTATCCTCTAGCTCTCCTCAGCCCAGCCAGCCCTC...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACTCCAGTGTGGCCCCTTaGTCCTCTCTAGCGCGTAGA +
Preference number: 4 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNSSVAP*SSLARR
Trigger: TCTACGCGCTAGAGAGGATCAAGGGGCCACACTGGA...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GGGTGGGCTCCTTGTGCTCAGGGGCAAAACCTCCAAGGATCTTGTAGACCCAGTTCTGGCTCAGGGAGGTaGCGTGGGCTGTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: GWAPCAQGQNLQGSCRPSSGSGR*RGLSEG
Trigger: GCCCTCGGACAGCCCACGGCACCTCCCTGAGCCAGA...ACTGGGTCTACAAGATCCTTGGAGGTTTTGCCCCTGAGCACAAGGAGCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp CCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCCCAGCAGCTCCCCTCTaGAAACAGCACCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PRWNVYPCRDLVLVPLGPPAAPL*KQHPLG
Trigger: TCCCAGAGGGTGCTGTTTGCAGAGGGGAGCTGCTGG...GGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GGGTGGGCTCCTTGTGCTCAGGGGCAAAACCTCCAAGGATCTTGTAGACCCAGTGGGCAGGCCGGCCCATaGCAATGCCGTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GWAPCAQGQNLQGSCRPSGQAGP*QCRPGP
Trigger: AGGACCTGGACGGCATTGGCATGGGCCGGCCTGCCC...ACTGGGTCTACAAGATCCTTGGAGGTTTTGCCCCTGAGCACAAGGAGCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR GCA 90 bp CGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTCCACTGGGACACTCTTaGCACTGGGCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: RQVGSPQVERLPLSGPCSPLGHS*HWAAST
Trigger: TGTGGACGCTGCCCAGTGGCAAGAGTGTCCCAGTGG...AGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTCCACTGGGACACTCTTaGCACTGGGCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLPLGHS*HWAAST
Trigger: TGTGGACGCTGCCCAGTGGCAAGAGTGTCCCAGTGG...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGCCGTTAGGCGCGCGTaGAGGGAGCCCAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFAVRRA*REPSGA
Trigger: GGCGCCACTGGGCTCCCTGCACGCGCGCCTAACGGC...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp AGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGTAGCGAGGTCTCGGTaGACCAGCCCGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SQYGGFHHPGWLPCRVQCVARSR*TSPRAP
Trigger: GGGGGCCCGCGGGCTGGTGCACCGAGACCTCGCTAC...ACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTATCTGCCAGCGTCACTaGCGAGGCTGGGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSPQVERLPLSGPCSGSAICQRH*RGWEAA
Trigger: GGCAGCTTCCCAGCCTCGGCAGTGACGCTGGCAGAT...AGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCCTCCTCTGGCCCCGTaGTGGGGGCGCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGPPLAP*WGRIPK
Trigger: CTTTGGGATGCGCCCCCAGCACGGGGCCAGAGGAGG...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTTGGTGGGTGACCCCATaGACACTCAGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLWWVTP*TLSSTS
Trigger: GGAGGTGGAGCTGAGTGTGCATGGGGTCACCCACCA...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTGGTAATGCTCCAGGATaGGCCAGCAGTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSGNAPG*ASSQLW
Trigger: CCAGAGCTGACTGCTGGCGCATCCTGGAGCATTACC...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCGGCTCCTCCTCCATGTaGCTACGGCAGGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTGSSSM*LRQVGS
Trigger: AGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCC...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCAGGATGGCTGCCCTaGAGAGTCCAGTGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTPGWLP*RVQCGS
Trigger: GCTACCACACTGGACTCTGCAGGGCAGCCATCCTGG...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTACCATCTGCAGAGGCTaGCCCAGTACAAGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: RQVGSPQVERLPLSGPCSTICRG*PSTRPC
Trigger: GCACGGCCTTGTACTGGGCCAGCCTCTGCAGATGGT...AGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAAGTGGCGCAGGCTCTCTaGGGCACACCAGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: QPSEAKEHGREETFASAQVAQAL*GTPGVG
Trigger: CCCTACGCCTGGTGTGCCCCAGAGAGCCTGCGCCAC...TTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCAGGATGAGGTACGGTaGGACCCCGGCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: WNVYPCRDLVLVPLGPMWQDEVR*DPGPGF
Trigger: GAACCCTGGGCCGGGGTCCCACCGTACCTCATCCTG...CCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGCCCAGGGTTCCTCGCCCCCGGAGAACATCTCCCACAGCGTCACCCCAAACATCATCCTCAGGGCGCCTaGTTCTGTGACATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GPGFLAPGEHLPQRHPKHHPQGA*FCDIPH
Trigger: GTGAGGGATGTCACAGAACCAGGCGCCCTGAGGATG...ATGTTTGGGGTGACGCTGTGGGAGATGTTCTCCGGGGGCGAGGAACCCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR CCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTGCGTGGAGGCAGGCCTaGAGGTCCCTGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSAWRQA*RSLGHS
Trigger: GCTGTGCCCCAGGGACCTCCAGGCCTGCCTCCACGC...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCGCTGTCTGGCACTCCTaGTGGGTGACCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: VYPCRDLVLVPLGPMWPGAVWHS*WVTPCT
Trigger: TGTGCATGGGGTCACCCACCAGGAGTGCCAGACAGC...GCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGCCCTCAGGGGCCTAGGCTTTTCATGCTGGTGTCTGTGCCCGCAGAAGCTGAGGCTGTCTGGCACTCCTaGTGGGTGACCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: GPQGPRLFMLVSVPAEAEAVWHS*WVTPCT
Trigger: TGTGCATGGGGTCACCCACCAGGAGTGCCAGACAGC...CTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCCCCTGAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCGCTCCTAGTGCTGTCTaGCACTCCTGGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTAPSAV*HSWWVT
Trigger: GGTCACCCACCAGGAGTGCCAGACAGCACTAGGAGC...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTCCACATCTCCCCCAGTaGCTCCTAGTGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLPHLPQ*LLVLSG
Trigger: GCCAGACAGCACTAGGAGCCACTGGGGGAGATGTGG...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCTGTTCTGGTTCCGCTTaGTCCCATGTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTCSGSA*SHVARP
Trigger: GGGCCTGGCCACATGGGACCAAGCGGAACCAGAACA...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACCGTCATCACCCACGATaGCCCTGGACCAAACGAAGG +
Preference number: 4 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNRHHPR*PWTKRR
Trigger: CCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACG...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CAA 72 bp ATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTaGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ISPGGTSTPVGT*FWFRLVPCGQA
Trigger: GGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp AGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTCCAGCCGCTGCAGGATaGGGTACGGTGGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: SQYGGFHHPGWLPCRVQCPAAAG*GTVGPR
Trigger: CCGGGGTCCCACCGTACCTCATCCTGCAGCGGCTGG...ACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCGGGCGCCTGGTTCTGTaGCATCCCTCACACAACATG +
Preference number: 4 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTGRLVL*HPSHNM
Trigger: CATGTTGTGTGAGGGATGTCACAGAACCAGGCGCCC...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCGAGGGCTGGCTGGGCTaGGGAGAGCTAGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTEGWLG*GELEDK
Trigger: TTTATCCTCTAGCTCTCCTCAGCCCAGCCAGCCCTC...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCGGCACTCCTGGTGGGTaGCCCCATGCACACTCAGCT +
Preference number: 4 (lower is better)
Translates to: EQSSSPTMALDQTKAVWAGTPGG*PHAHSA
Trigger: AGCTGAGTGTGCATGGGGTCACCCACCAGGAGTGCC...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCTCCAGTGTGGCCCCTTaGTCCTCTCTAGCGCGTAGA +
Preference number: 4 (lower is better)
Translates to: PRWNVYPCRDLVLVPLGPSSVAP*SSLARR
Trigger: TCTACGCGCTAGAGAGGATCAAGGGGCCACACTGGA...GGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GGCCCTCAGGGGCCTAGGCTTTTCATGCTGGTGTCTGTGCCCGCAGAAGCTGAGTCCAGTGTGGCCCCTTaGTCCTCTCTAGCGCGTAGA +
Preference number: 4 (lower is better)
Translates to: GPQGPRLFMLVSVPAEAESSVAP*SSLARR
Trigger: TCTACGCGCTAGAGAGGATCAAGGGGCCACACTGGA...CTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCCCCTGAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GAGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTTCTGGCTCAGGGAGGTaGCGTGGGCTGTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: ELQPSEAKEHGREETFASSGSGR*RGLSEG
Trigger: GCCCTCGGACAGCCCACGGCACCTCCCTGAGCCAGA...ACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTGGGCAGGCCGGCCCATaGCAATGCCGTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSGQAGP*QCRPGP
Trigger: AGGACCTGGACGGCATTGGCATGGGCCGGCCTGCCC...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTAGCTCCATCACCATCTaGAGAGGCTGGCCCAGTACA +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSSSITI*RGWPST
Trigger: TGTACTGGGCCAGCCTCTGCAGATGGTGATGGAGCT...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCGTAGCGAGGTCTCGGTaGACCAGCCCGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LDQTKAVWAYTPSQYGGFVARSR*TSPRAP
Trigger: GGGGGCCCGCGGGCTGGTGCACCGAGACCTCGCTAC...GAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTATCCCTCACACAACATaGTTCCGAAGGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLIPHTT*FRRPGL
Trigger: GAGGCCGGGCCTTCGGAAGCATGTTGTGTGAGGGAT...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGCTCCCCGGGCAGGGGTaGCTCTGTGGACTGGACGGG +
Preference number: 4 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMLPGQG*LCGLDG
Trigger: CCCGTCCAGTCCACAGAGGCACCCCTGCCCGGGGAG...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTGGGTGACCCCATaGACACTCAGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GSPQVERLPLSGPCSGSAWWVTP*TLSSTS
Trigger: GGAGGTGGAGCTGAGTGTGCATGGGGTCACCCACCA...AGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCGGCCTAGGCTTTTCATaGTGGTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VYPCRDLVLVPLGPMWPGGLGFS*WCLCPQ
Trigger: CTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCC...GCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTGGCCTAGGCTTTTCATaGTGGTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLGLGFS*WCLCPQ
Trigger: CTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCC...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGATAGGACACAGTTCCTaGCCCATGGCAGGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRIGHSS*PMAGGS
Trigger: TGAACCCCCTGCCATGGGGCAGGAACTGTGTCCTAT...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR CCA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCCAGACGCAGCACGTGTaGGTGCTCCAAGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTQTQHV*VLQVHH
Trigger: ATGATGAACTTGGAGCACCCACACGTGCTGCGTCTG...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GAGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGTGGCGCAGGCTCTCTaGGGCACACCAGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: ELQPSEAKEHGREETFASVAQAL*GTPGVG
Trigger: CCCTACGCCTGGTGTGCCCCAGAGAGCCTGCGCCAC...ACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AACATCTCCCACAGCGTCACCCCAAACATCCACACGTCCGAGGCAGACGAGAAGCAGGATGAGGTACGGTaGGACCCCGGCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: NISHSVTPNIHTSEADEKQDEVR*DPGPGF
Trigger: GAACCCTGGGCCGGGGTCCCACCGTACCTCATCCTG...CTTCTCGTCTGCCTCGGACGTGTGGATGTTTGGGGTGACGCTGTGGGAGATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR CCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTCATCCTCAGGGCGCCTaGTTCTGTGACATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLHPQGA*FCDIPH
Trigger: GTGAGGGATGTCACAGAACCAGGCGCCCTGAGGATG...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTCGTCACTGCCGAGGCTaGGAAGCTGCCCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLRHCRG*EAAHFE
Trigger: TTCAAAGTGGGCAGCTTCCCAGCCTCGGCAGTGACG...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGGCAGGGGTGCCTCTGTaGACTGGACGGGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SIWWLPSSRMAALQSPVWAGVPL*TGRVAG
Trigger: GCCAGCCACCCGTCCAGTCCACAGAGGCACCCCTGC...CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTTCCATCTATGCTTCCTaGGTGTTGATCTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSSIYAS*VLISPG
Trigger: GCCCGGGGAGATCAACACCCAGGAAGCATAGATGGA...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACTCCATCTATGCTTCCTaGGTGTTGATCTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNSIYAS*VLISPG
Trigger: GCCCGGGGAGATCAACACCCAGGAAGCATAGATGGA...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGCGTGGAGGCAGGCCTaGAGGTCCCTGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: KRAIVITHDGPGPNEGSLAWRQA*RSLGHS
Trigger: GCTGTGCCCCAGGGACCTCCAGGCCTGCCTCCACGC...CAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCGTGGAGGCAGGCCTaGAGGTCCCTGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: LSAREQSSSPTMALDQTKAWRQA*RSLGHS
Trigger: GCTGTGCCCCAGGGACCTCCAGGCCTGCCTCCACGC...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGTCGGGACCTTGTTCTaGTTCCGCTTGGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRVGTLF*FRLVPC
Trigger: ACATGGGACCAAGCGGAACCAGAACAAGGTCCCGAC...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGGGCCCTTCCAGATTGTaGAGTCGGGGCTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: WNVYPCRDLVLVPLGPMWGPSRL*SRGCPR
Trigger: TCGAGGGCAGCCCCGACTCCACAATCTGGAAGGGCC...CCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR TCA 90 bp CTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTCCTAGTGGGACAAGGTaGCGGTCCCCAGGGCGACTG +
Preference number: 4 (lower is better)
Translates to: LQKPRSMGGRRHLPVPNSPSGTR*RSPGRL
Trigger: CAGTCGCCCTGGGGACCGTCACCTTGTCCCACTAGG...AGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576812.5
ENST00000639430.1
CDS-3UTR TCA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCATGCTTCCTGGGTGTTaGTCTCCCCGGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGMLPGC*SPRAGV
Trigger: CACCCCTGCCCGGGGAGATCAACACCCAGGAAGCAT...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGGCCGGCCCATGCCAATaGCGTCCAGGTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SIWWLPSSRMAALQSPVWAGPCQ*RPGPQA
Trigger: AGCCTGAGGACCTGGACGGCATTGGCATGGGCCGGC...CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGTCTGGCTCAGGGAGGTaGCGTGGGCTGTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSAREQSSSPTMALDQTKSGSGR*RGLSEG
Trigger: GCCCTCGGACAGCCCACGGCACCTCCCTGAGCCAGA...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCCCAGCAGCTCCCCTCTaGAAACAGCACCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: EQSSSPTMALDQTKAVWAPAAPL*KQHPLG
Trigger: TCCCAGAGGGTGCTGTTTGCAGAGGGGAGCTGCTGG...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp AGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGGCAGGCCGGCCCATaGCAATGCCGTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SQYGGFHHPGWLPCRVQCGQAGP*QCRPGP
Trigger: AGGACCTGGACGGCATTGGCATGGGCCGGCCTGCCC...ACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TGTAGTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCAGGGCAGGCCGGCCCATaGCAATGCCGTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: CSGQTRSFLAQPKELQPSGQAGP*QCRPGP
Trigger: AGGACCTGGACGGCATTGGCATGGGCCGGCCTGCCC...TGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCACTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGGGGCAGGCCGGCCCATaGCAATGCCGTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LYPKSIWWLPSSRMAALQGQAGP*QCRPGP
Trigger: AGGACCTGGACGGCATTGGCATGGGCCGGCCTGCCC...CTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACGAGCTTCGGACAGTCTaGGCTGGGCAGGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: QMSLSAREQSSSPTMALDELRTV*AGQAGP
Trigger: TGGGCCGGCCTGCCCAGCGCAGACTGTCCGAAGCTC...GTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCCCACTGGGACACTCTTaGCACTGGGCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: EQSSSPTMALDQTKAVWAPLGHS*HWAAST
Trigger: TGTGGACGCTGCCCAGTGGCAAGAGTGTCCCAGTGG...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAAGTCCCCCAGTTCTGTaGCCATCGGGCCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: SAFRSQGAWEGGDICQCPSPPVL*PSGLRD
Trigger: GTCCCGAAGGCCCGATGGGCACAGAACTGGGGGACT...TGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GTGGTAGCTGATGGCAGTTCAGGATGGCTGTTCACATGGTCCAGTGTGGCCCCTCTGTCCTCCAGCCGCTaGAGGATGAGGTACGGTGGG +
Preference number: 4 (lower is better)
Translates to: VVADGSSGWLFTWSSVAPLSSSR*RMRYGG
Trigger: CCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAG...AGGGGCCACACTGGACCATGTGAACAGCCATCCTGAACTGCCATCAGCTACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTGTCCTCCAGCCGCTaGAGGATGAGGTACGGTGGG +
Preference number: 4 (lower is better)
Translates to: QPSEAKEHGREETFASAQLSSSR*RMRYGG
Trigger: CCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAG...TTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCCTCCTCTGGCCCCGTaGTGGGGGCGCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: QMSLSAREQSSSPTMALDPPLAP*WGRIPK
Trigger: CTTTGGGATGCGCCCCCAGCACGGGGCCAGAGGAGG...GTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGGCTCCTCCTCCATGTaGCTACGGCAGGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: QVERLPLSGPCSGSAWSHGSSSM*LRQVGS
Trigger: AGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCC...ATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGATGGCTGCCCTaGAGAGTCCAGTGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: WNVYPCRDLVLVPLGPMWPGWLP*RVQCGS
Trigger: GCTACCACACTGGACTCTGCAGGGCAGCCATCCTGG...CCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGCAAACAGCACCCTCTaGGATCAGACACTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RQVGSPQVERLPLSGPCSANSTL*DQTLEA
Trigger: GGCCTCAAGTGTCTGATCCCAGAGGGTGCTGTTTGC...AGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTCGGTGCACCACACCGAAGCAGCCTGAACCCAGCAGCTCCCCTCTGCAAACAGGCAAACAGCACCCTCTaGGATCAGACACTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LGAPHRSSLNPAAPLCKQANSTL*DQTLEA
Trigger: GGCCTCAAGTGTCTGATCCCAGAGGGTGCTGTTTGC...CTGTTTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR CCA 90 bp CCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCGCAAACAGCACCCTCTaGGATCAGACACTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PRWNVYPCRDLVLVPLGPANSTL*DQTLEA
Trigger: GGCCTCAAGTGTCTGATCCCAGAGGGTGCTGTTTGC...GGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGGACGAGAAGGCTCCGTaGCGCAGGCTCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SIWWLPSSRMAALQSPVWDEKAP*RRLSGA
Trigger: TGCCCCAGAGAGCCTGCGCCACGGAGCCTTCTCGTC...CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GAGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTCAGGATGAGGTACGGTaGGACCCCGGCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: ELQPSEAKEHGREETFASQDEVR*DPGPGF
Trigger: GAACCCTGGGCCGGGGTCCCACCGTACCTCATCCTG...ACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AACATCTCCCACAGCGTCACCCCAAACATCCACACGTCCGAGGCAGACGAGAAGAGCAGCCCCTCCAGGTaGGAAAAGCTAGGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: NISHSVTPNIHTSEADEKSSPSR*EKLGRS
Trigger: CGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCT...CTTCTCGTCTGCCTCGGACGTGTGGATGTTTGGGGTGACGCTGTGGGAGATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR CCA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACAAGGTGCGACCATTCTaGCCCTTCCAGATTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNKVRPF*PFQIVE
Trigger: CTCCACAATCTGGAAGGGCCAGAATGGTCGCACCTT...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTGGTGCCTCTGTGGACTaGACGGGTGGCTGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: LQKPRSMGGRRHLPVPNSGASVD*TGGWQA
Trigger: GGCTTGCCAGCCACCCGTCCAGTCCACAGAGGCACC...AGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGGGGTGCCTCTGTaGACTGGACGGGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSAREQSSSPTMALDQTKAGVPL*TGRVAG
Trigger: GCCAGCCACCCGTCCAGTCCACAGAGGCACCCCTGC...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTTCCATCTATGCTTCCTaGGTGTTGATCTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: RQVGSPQVERLPLSGPCSSIYAS*VLISPG
Trigger: GCCCGGGGAGATCAACACCCAGGAAGCATAGATGGA...AGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGGCATGTTCCTCCTCTaGCCCCGTGCTGGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMGMFLL*PRAGGA
Trigger: TGCGCCCCCAGCACGGGGCCAGAGGAGGAACATGCC...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGCATGTTCCTCCTCTaGCCCCGTGCTGGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFGMFLL*PRAGGA
Trigger: TGCGCCCCCAGCACGGGGCCAGAGGAGGAACATGCC...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTCCTGGGGCACAGCTCTaGCTTGTCGAATTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSPQVERLPLSGPCSGSAPGAQL*LVEFQG
Trigger: CCCCTGAAATTCGACAAGCCAGAGCTGTGCCCCAGG...AGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GTGGTAGCTGATGGCAGTTCAGGATGGCTGTTCACATGGTCCAGTGTGGCCCCTAGGCCTGGAGGTCCCTaGGGCACAGCTCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: VVADGSSGWLFTWSSVAPRPGGP*GTALAC
Trigger: ACAAGCCAGAGCTGTGCCCCAGGGACCTCCAGGCCT...AGGGGCCACACTGGACCATGTGAACAGCCATCCTGAACTGCCATCAGCTACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCACATCTCCCCCAGTaGCTCCTAGTGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: WNVYPCRDLVLVPLGPMWPHLPQ*LLVLSG
Trigger: GCCAGACAGCACTAGGAGCCACTGGGGGAGATGTGG...CCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACCTAGGCTTTTCATGCTaGTGTCTGTGCCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNLGFSC*CLCPQK
Trigger: CTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAG...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTCCGCTTGGTCCCATGTaGCCAGGCCCTCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFPLGPM*PGPQGP
Trigger: AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGG...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTGTCGGGACCTTGTTCTaGTTCCGCTTGGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLVGTLF*FRLVPC
Trigger: ACATGGGACCAAGCGGAACCAGAACAAGGTCCCGAC...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp TGTAGTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCACCTAGTGGGACAAGGTaGCGGTCCCCAGGGCGACTG +
Preference number: 4 (lower is better)
Translates to: CSGQTRSFLAQPKELQPSPSGTR*RSPGRL
Trigger: CAGTCGCCCTGGGGACCGTCACCTTGTCCCACTAGG...TGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCACTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576812.5
ENST00000639430.1
CDS-3UTR TCA 90 bp GTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCGCTCCAAGTTCATCATaGCCGATACCTCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: VYPCRDLVLVPLGPMWPGAPSSS*PIPLAG
Trigger: TCCTGCGAGAGGTATCGGTCATGATGAACTTGGAGC...GCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTGCTCCAAGTTCATCATaGCCGATACCTCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLAPSSS*PIPLAG
Trigger: TCCTGCGAGAGGTATCGGTCATGATGAACTTGGAGC...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGCGAAGTCAGCCACCTTaGTGGTGCGCGGCGACGCCA +
Preference number: 4 (lower is better)
Translates to: LYPKSIWWLPSSRMAALQRSQPP*WCAATP
Trigger: TGGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCG...CTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCGAAGTCAGCCACCTTaGTGGTGCGCGGCGACGCCA +
Preference number: 4 (lower is better)
Translates to: QMSLSAREQSSSPTMALDRSQPP*WCAATP
Trigger: TGGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCG...GTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCACCAGCCGCTGCAGGATaGGGTACGGTGGGACCCCGG +
Preference number: 4 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPPAAAG*GTVGPR
Trigger: CCGGGGTCCCACCGTACCTCATCCTGCAGCGGCTGG...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GAGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGGCACTCCTGGTGGGTaGCCCCATGCACACTCAGCT +
Preference number: 4 (lower is better)
Translates to: ELQPSEAKEHGREETFASGTPGG*PHAHSA
Trigger: AGCTGAGTGTGCATGGGGTCACCCACCAGGAGTGCC...ACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGAGAGCTGATCTACCTTaGGGTTCCGGATGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRRADLP*GSGWQK
Trigger: TTTCTGCCATCCGGAACCTCAAGGTAGATCAGCTCT...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTCCAAGTCCTCTTGTTTaGGAATGTAGTGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: RDLVLVPLGPMWPGPQGPPSPLV*ECSGQT
Trigger: AGTCTGCCCACTACATTCTCAAACAAGAGGACTTGG...AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTCCAGTGTGGCCCCTTaGTCCTCTCTAGCGCGTAGA +
Preference number: 4 (lower is better)
Translates to: EQSSSPTMALDQTKAVWASSVAP*SSLARR
Trigger: TCTACGCGCTAGAGAGGATCAAGGGGCCACACTGGA...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GCTGGGGCAGGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTCTGGCTCAGGGAGGTaGCGTGGGCTGTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: AGAGASPSHNPYYQHQMSSGSGR*RGLSEG
Trigger: GCCCTCGGACAGCCCACGGCACCTCCCTGAGCCAGA...GGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCACCAGCAGCTCCCCTCTaGAAACAGCACCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SAFRSQGAWEGGDICQCPPAAPL*KQHPLG
Trigger: TCCCAGAGGGTGCTGTTTGCAGAGGGGAGCTGCTGG...TGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCGAGCTTCGGACAGTCTaGGCTGGGCAGGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LDQTKAVWAYTPSQYGGFELRTV*AGQAGP
Trigger: TGGGCCGGCCTGCCCAGCGCAGACTGTCCGAAGCTC...GAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTATGGCTCCCGCCAGCTaGCGCAGGAAGAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFMAPAS*RRKRQS
Trigger: GCTCTGCCTCTTCCTGCGGCAGCTGGCGGGAGCCAT...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCACTCCCCGGGCAGGGGTaGCTCTGTGGACTGGACGGG +
Preference number: 4 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPLPGQG*LCGLDG
Trigger: CCCGTCCAGTCCACAGAGGCACCCCTGCCCGGGGAG...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTCCAGACTCCTGGAAATaGCTTTCATCCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLPDSWK*LSSSPG
Trigger: CCCTGGAGAGGATGAAAGGCATTTCCAGGAGTCTGG...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAGGCTCCTCCTCCATGTaGCTACGGCAGGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: SAFRSQGAWEGGDICQCPGSSSM*LRQVGS
Trigger: AGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCC...TGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTACCTCCCAGGCTGCCTaGGCTAAATCCGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LQKPRSMGGRRHLPVPNSTSQAA*AKSEEA
Trigger: CGCCTCCTCGGATTTAGCCCAGGCAGCCTGGGAGGT...AGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp ACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAGCAGCCAAAGTCGAAGTGCTCTaGCCGAGTGACATTAAGCTC +
Preference number: 4 (lower is better)
Translates to: TLATGQRPQPSVHHTEAAKVEVL*PSDIKL
Trigger: GAGCTTAATGTCACTCGGCCAGAGCACTTCGACTTT...GGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR CCA 90 bp GTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCAGAAGGGACACTCTTGCCACTaGGCAGCGTCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VGRLDPSWPSQRSFSLQKGHSCH*AASTAL
Trigger: GAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTCC...CTTCTGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTCAGACGCAGCACGTGTaGGTGCTCCAAGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLQTQHV*VLQVHH
Trigger: ATGATGAACTTGGAGCACCCACACGTGCTGCGTCTG...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTCAGACGCAGCACGTGTaGGTGCTCCAAGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: RQVGSPQVERLPLSGPCSQTQHV*VLQVHH
Trigger: ATGATGAACTTGGAGCACCCACACGTGCTGCGTCTG...AGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCTGGGGCAGGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCGTGGCGCAGGCTCTCTaGGGCACACCAGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: AGAGASPSHNPYYQHQMSVAQAL*GTPGVG
Trigger: CCCTACGCCTGGTGTGCCCCAGAGAGCCTGCGCCAC...GGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGACGAGAAGGCTCCGTaGCGCAGGCTCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SQYGGFHHPGWLPCRVQCDEKAP*RRLSGA
Trigger: TGCCCCAGAGAGCCTGCGCCACGGAGCCTTCTCGTC...ACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GAGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTAGCAGCCCCTCCAGGTaGGAAAAGCTAGGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: ELQPSEAKEHGREETFASSSPSR*EKLGRS
Trigger: CGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCT...ACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCGGCCCTTCCAGATTGTaGAGTCGGGGCTGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: EQSSSPTMALDQTKAVWAGPSRL*SRGCGK
Trigger: CTTTCCACAGCCCCGACTCCACAATCTGGAAGGGCC...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576812.5
ENST00000639430.1
CDS-3UTR CCA 90 bp CTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGGGTGCCTCTGTGGACTaGACGGGTGGCTGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: LYPKSIWWLPSSRMAALQGASVD*TGGWQA
Trigger: GGCTTGCCAGCCACCCGTCCAGTCCACAGAGGCACC...CTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCGCAGGGGTGCCTCTGTaGACTGGACGGGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LDQTKAVWAYTPSQYGGFAGVPL*TGRVAG
Trigger: GCCAGCCACCCGTCCAGTCCACAGAGGCACCCCTGC...GAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCTGGGGCAGGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCGGCATGTTCCTCCTCTaGCCCCGTGCTGGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: AGAGASPSHNPYYQHQMSGMFLL*PRAGGA
Trigger: TGCGCCCCCAGCACGGGGCCAGAGGAGGAACATGCC...GGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCTTGAACCACCCCCTGTaGGACGAGGACCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGLNHPL*DEDRGT
Trigger: TGTCCCTCGGTCCTCGTCCCACAGGGGGTGGTTCAA...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCTGGGGCACAGCTCTaGCTTGTCGAATTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: WNVYPCRDLVLVPLGPMWPGAQL*LVEFQG
Trigger: CCCCTGAAATTCGACAAGCCAGAGCTGTGCCCCAGG...CCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCGCTCCTAGTGCTGTCTaGCACTCCTGGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGAPSAV*HSWWVT
Trigger: GGTCACCCACCAGGAGTGCCAGACAGCACTAGGAGC...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCGCCAGCAGTCAGCTCTaGACCGGCTACTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGASSQL*TGYSGG
Trigger: TCCACCTGAGTAGCCGGTCCAGAGCTGACTGCTGGC...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCCTAGGCTTTTCATGCTaGTGTCTGTGCCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRWNVYPCRDLVLVPLGPLGFSC*CLCPQK
Trigger: CTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAG...GGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCTGTGCCTACGGCAGGTaGGATCTCCCCAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGCAYGR*DLPRWN
Trigger: GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACA...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTCACCCACGATGGCCCTaGACCAAACGAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GSPQVERLPLSGPCSGSAHPRWP*TKRRQF
Trigger: AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTG...AGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATCGTCATCACCCACGATaGCCCTGGACCAAACGAAGG +
Preference number: 4 (lower is better)
Translates to: QVERLPLSGPCSGSAWSHRHHPR*PWTKRR
Trigger: CCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACG...ATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCGAAGTCAGCCACCTTaGTGGTGCGCGGCGACGCCA +
Preference number: 4 (lower is better)
Translates to: LDQTKAVWAYTPSQYGGFRSQPP*WCAATP
Trigger: TGGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCG...GAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp AGAACATCTCCCACAGCGTCACCCCAAACATCCACACGTCCGAGGCAGACGAGAGGGCGCCTGGTTCTGTaGCATCCCTCACACAACATG +
Preference number: 4 (lower is better)
Translates to: RTSPTASPQTSTRPRQTRGRLVL*HPSHNM
Trigger: CATGTTGTGTGAGGGATGTCACAGAACCAGGCGCCC...TCTCGTCTGCCTCGGACGTGTGGATGTTTGGGGTGACGCTGTGGGAGATGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR TCA 90 bp AAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGATGCTTCCTGGGTGTTaGTCTCCCCGGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KRAIVITHDGPGPNEGSLMLPGC*SPRAGV
Trigger: CACCCCTGCCCGGGGAGATCAACACCCAGGAAGCAT...CAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp AGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTATGCTTCCTGGGTGTTaGTCTCCCCGGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SQYGGFHHPGWLPCRVQCMLPGC*SPRAGV
Trigger: CACCCCTGCCCGGGGAGATCAACACCCAGGAAGCAT...ACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp TCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAATAGCGGCTGGCAGCTaGGAGGTCCCACTGGTAATG +
Preference number: 4 (lower is better)
Translates to: SAFRSQGAWEGGDICQCPIAAGS*EVPLVM
Trigger: CATTACCAGTGGGACCTCTCAGCTGCCAGCCGCTAT...TGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCATAGCGGCTGGCAGCTaGGAGGTCCCACTGGTAATG +
Preference number: 4 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGIAAGS*EVPLVM
Trigger: CATTACCAGTGGGACCTCTCAGCTGCCAGCCGCTAT...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp TGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGGTCCAGTGTGGTAGCTaGTGGCAGTTCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: WNVYPCRDLVLVPLGPMWVQCGS*WQFRMA
Trigger: AGCCATCCTGAACTGCCATCAGCTACCACACTGGAC...CCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGGCGGAAGCGGCGACTaGGGAACCTCCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMGGSGD*GTSQAA
Trigger: GGCAGCCTGGGAGGTTCCGCAGTCGCCGCTTCCGCC...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGAGCCGGCCCATGCCAATaGCGTCCAGGTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SNVLECKRAIVITHDGPGAGPCQ*RPGPQA
Trigger: AGCCTGAGGACCTGGACGGCATTGGCATGGGCCGGC...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGAGTCCCCCAGTTCTGTaGCCATCGGGCCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: LSAREQSSSPTMALDQTKSPPVL*PSGLRD
Trigger: GTCCCGAAGGCCCGATGGGCACAGAACTGGGGGACT...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGCCCAGTACAAGGCCGTaGAGACGCAGCACGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LSAREQSSSPTMALDQTKPSTRP*RRSTCG
Trigger: CCCACACGTGCTGCGTCTGCACGGCCTTGTACTGGG...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTATCTGCCAGCGTCACTaGCGAGGCTGGGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFICQRH*RGWEAA
Trigger: GGCAGCTTCCCAGCCTCGGCAGTGACGCTGGCAGAT...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGTGGTGGGTGACCCCATaGACACTCAGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SIWWLPSSRMAALQSPVWWWVTP*TLSSTS
Trigger: GGAGGTGGAGCTGAGTGTGCATGGGGTCACCCACCA...CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAAGGTAATGCTCCAGGATaGGCCAGCAGTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QPSEAKEHGREETFASAQGNAPG*ASSQLW
Trigger: CCAGAGCTGACTGCTGGCGCATCCTGGAGCATTACC...TTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTACCTCCCAGGCTGCCTaGGCTAAATCCGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: SQYGGFHHPGWLPCRVQCTSQAA*AKSEEA
Trigger: CGCCTCCTCGGATTTAGCCCAGGCAGCCTGGGAGGT...ACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGTAGTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCAGTCTCCAGCTCCACCTaGTCAAGGCGGAAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: CSGQTRSFLAQPKELQPSVSSST*SRRKRR
Trigger: TCGCCGCTTCCGCCTTGACCAGGTGGAGCTGGAGAC...TGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCACTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCCCTCGGTGCACCACACCGAAGCAGCCTGAACCCAGCAGCTCCCCTCTGCAAAAAAGTCGAAGTGCTCTaGCCGAGTGACATTAAGCTC +
Preference number: 4 (lower is better)
Translates to: ALGAPHRSSLNPAAPLCKKVEVL*PSDIKL
Trigger: GAGCTTAATGTCACTCGGCCAGAGCACTTCGACTTT...TTTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCGAGGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR CCA 90 bp CTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTACCATCTGCAGAGGCTaGCCCAGTACAAGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LQKPRSMGGRRHLPVPNSTICRG*PSTRPC
Trigger: GCACGGCCTTGTACTGGGCCAGCCTCTGCAGATGGT...AGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTACCATCTGCAGAGGCTaGCCCAGTACAAGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSTICRG*PSTRPC
Trigger: GCACGGCCTTGTACTGGGCCAGCCTCTGCAGATGGT...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGGTGCAGGGAGCCCAGTaGCGCCAGCTCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: LYPKSIWWLPSSRMAALQVQGAQ*RQLHHH
Trigger: ATGGTGATGGAGCTGGCGCCACTGGGCTCCCTGCAC...CTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGTGCAGGGAGCCCAGTaGCGCCAGCTCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: KRAIVITHDGPGPNEGSLVQGAQ*RQLHHH
Trigger: ATGGTGATGGAGCTGGCGCCACTGGGCTCCCTGCAC...CAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGAGGCCTGGAGGTCCCTaGGGCACAGCTCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LSAREQSSSPTMALDQTKRPGGP*GTALAC
Trigger: ACAAGCCAGAGCTGTGCCCCAGGGACCTCCAGGCCT...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTGCTGTCTGGCACTCCTaGTGGGTGACCCCATGCACA +
Preference number: 4 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSAVWHS*WVTPCT
Trigger: TGTGCATGGGGTCACCCACCAGGAGTGCCAGACAGC...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GAGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCAGCAGTCAGCTCTaGACCGGCTACTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ELQPSEAKEHGREETFASASSQL*TGYSGG
Trigger: TCCACCTGAGTAGCCGGTCCAGAGCTGACTGCTGGC...ACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTGTGCCTACGGCAGGTaGGATCTCCCCAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSCAYGR*DLPRWN
Trigger: GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACA...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGCCCAAGTCAATATGGTaGCTTCCATCATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRPKSIW*LPSSRM
Trigger: CATCCTGGATGATGGAAGCCACCATATTGACTTGGG...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCGCTGGTACGGAGAGTTaGCCCTGGCCTAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGAGTES*PWPRQS
Trigger: ACTCTGTCTAGGCCAGGGCCAACTCTCCGTACCAGC...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR CCA 90 bp CCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCTTACTTAATGAACCCTaGAATGGGGCCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PRWNVYPCRDLVLVPLGPLLNEP*NGARAE
Trigger: CTCTGCCCTGGCCCCATTCCAGGGTTCATTAAGTAA...GGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR TCA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGAGATCGCCCCGACTGTaGGAAGCCCCCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMRSPRL*EAPFPS
Trigger: AGAAGGGAAGGGGGCTTCTCACAGTCGGGGCGATCT...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000576812.5
ENST00000639430.1
CDS-3UTR TCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTATAGCGGCTGGCAGCTaGGAGGTCCCACTGGTAATG +
Preference number: 4 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSIAAGS*EVPLVM
Trigger: CATTACCAGTGGGACCTCTCAGCTGCCAGCCGCTAT...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GGCCCTCAGGGGCCTAGGCTTTTCATGCTGGTGTCTGTGCCCGCAGAAGCTGAGCCAAGTCCTCTTGTTTaGGAATGTAGTGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: GPQGPRLFMLVSVPAEAEPSPLV*ECSGQT
Trigger: AGTCTGCCCACTACATTCTCAAACAAGAGGACTTGG...CTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCCCCTGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATAGGGCAGAGAGATGTTaGTGCTGGTACGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: QVERLPLSGPCSGSAWSHRAERC*CWYGEL
Trigger: CAACTCTCCGTACCAGCATCAACATCTCTCTGCCCT...ATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR GCA 90 bp GCTGGGGCAGGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCGTCCACAGCCCTCGGTaGACCACACCGAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AGAGASPSHNPYYQHQMSVHSPR*TTPKQP
Trigger: AGGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGAC...GGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGCTGTCCTCCAGCCGCTaGAGGATGAGGTACGGTGGG +
Preference number: 4 (lower is better)
Translates to: GSLGLYPKSIWWLPSSRMLSSSR*RMRYGG
Trigger: CCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAG...CATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACTGTCCTCCAGCCGCTaGAGGATGAGGTACGGTGGG +
Preference number: 4 (lower is better)
Translates to: SNVLECKRAIVITHDGPGLSSSR*RMRYGG
Trigger: CCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAG...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGAAGGCCCGGCCTCTTaGAGCAGCCCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMEGPAS*SSPSRW
Trigger: CCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTC...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCTCCCCGGGCAGGGGTaGCTCTGTGGACTGGACGGG +
Preference number: 4 (lower is better)
Translates to: SILPASNVLECKRAIVITLPGQG*LCGLDG
Trigger: CCCGTCCAGTCCACAGAGGCACCCCTGCCCGGGGAG...GGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCCCAGACTCCTGGAAATaGCTTTCATCCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EQSSSPTMALDQTKAVWAPDSWK*LSSSPG
Trigger: CCCTGGAGAGGATGAAAGGCATTTCCAGGAGTCTGG...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGACTCCTGGAAATaGCTTTCATCCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WNVYPCRDLVLVPLGPMWPDSWK*LSSSPG
Trigger: CCCTGGAGAGGATGAAAGGCATTTCCAGGAGTCTGG...CCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGTCCATAATCTTCCTCTaGAACTCAGGATCGGACAAG +
Preference number: 4 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRSIIFL*NSGSDK
Trigger: CTTGTCCGATCCTGAGTTGCAGAGGAAGATTATGGA...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCAGAAGGGCCTAGGCTTTTCATaGTGGTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VGRLDPSWPSQRSFSLQKGLGFS*WCLCPQ
Trigger: CTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCC...CTTCTGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGACCTCCCAGGCTGCCTaGGCTAAATCCGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GSLGLYPKSIWWLPSSRMTSQAA*AKSEEA
Trigger: CGCCTCCTCGGATTTAGCCCAGGCAGCCTGGGAGGT...CATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCAAAGTCGAAGTGCTCTaGCCGAGTGACATTAAGCTC +
Preference number: 4 (lower is better)
Translates to: VYPCRDLVLVPLGPMWPGKVEVL*PSDIKL
Trigger: GAGCTTAATGTCACTCGGCCAGAGCACTTCGACTTT...GCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGCCCTCAGGGGCCTAGGCTTTTCATGCTGGTGTCTGTGCCCGCAGAAGCTGAGAAAGTCGAAGTGCTCTaGCCGAGTGACATTAAGCTC +
Preference number: 4 (lower is better)
Translates to: GPQGPRLFMLVSVPAEAEKVEVL*PSDIKL
Trigger: GAGCTTAATGTCACTCGGCCAGAGCACTTCGACTTT...CTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCCCCTGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGACCATCTGCAGAGGCTaGCCCAGTACAAGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMTICRG*PSTRPC
Trigger: GCACGGCCTTGTACTGGGCCAGCCTCTGCAGATGGT...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCGTGCAGGGAGCCCAGTaGCGCCAGCTCCATCACCAT +
Preference number: 4 (lower is better)
Translates to: LDQTKAVWAYTPSQYGGFVQGAQ*RQLHHH
Trigger: ATGGTGATGGAGCTGGCGCCACTGGGCTCCCTGCAC...GAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGACGAGAAGGCTCCGTaGCGCAGGCTCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPDEKAP*RRLSGA
Trigger: TGCCCCAGAGAGCCTGCGCCACGGAGCCTTCTCGTC...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGAAGCAGCCCCTCCAGGTaGGAAAAGCTAGGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: SNVLECKRAIVITHDGPGSSPSR*EKLGRS
Trigger: CGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCT...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCAGCAGCCCCTCCAGGTaGGAAAAGCTAGGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: LDQTKAVWAYTPSQYGGFSSPSR*EKLGRS
Trigger: CGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCT...GAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCAAGGTGCGACCATTCTaGCCCTTCCAGATTGTGGAG +
Preference number: 4 (lower is better)
Translates to: EQSSSPTMALDQTKAVWAKVRPF*PFQIVE
Trigger: CTCCACAATCTGGAAGGGCCAGAATGGTCGCACCTT...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GAGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTCGTCACTGCCGAGGCTaGGAAGCTGCCCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: ELQPSEAKEHGREETFASRHCRG*EAAHFE
Trigger: TTCAAAGTGGGCAGCTTCCCAGCCTCGGCAGTGACG...ACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTCGTCACTGCCGAGGCTaGGAAGCTGCCCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSRHCRG*EAAHFE
Trigger: TTCAAAGTGGGCAGCTTCCCAGCCTCGGCAGTGACG...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGCCTCTGGCCCCGTGCTaGGGGCGCATCCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: GSLGLYPKSIWWLPSSRMPLAPC*GRIPKI
Trigger: AATCTTTGGGATGCGCCCCCAGCACGGGGCCAGAGG...CATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGTTGAACCACCCCCTGTaGGACGAGGACCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: LSAREQSSSPTMALDQTKLNHPL*DEDRGT
Trigger: TGTCCCTCGGTCCTCGTCCCACAGGGGGTGGTTCAA...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGCTCCTAGTGCTGTCTaGCACTCCTGGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFAPSAV*HSWWVT
Trigger: GGTCACCCACCAGGAGTGCCAGACAGCACTAGGAGC...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGCCACATCTCCCCCAGTaGCTCCTAGTGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMPHLPQ*LLVLSG
Trigger: GCCAGACAGCACTAGGAGCCACTGGGGGAGATGTGG...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGCCAGCAGTCAGCTCTaGACCGGCTACTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMASSQL*TGYSGG
Trigger: TCCACCTGAGTAGCCGGTCCAGAGCTGACTGCTGGC...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGCCAGGACATAGCGGCTaGCAGCTGAGAGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: KRAIVITHDGPGPNEGSLPGHSG*QLRGPT
Trigger: AGTGGGACCTCTCAGCTGCCAGCCGCTATGTCCTGG...CAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGCCAGGACATAGCGGCTaGCAGCTGAGAGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMPGHSG*QLRGPT
Trigger: AGTGGGACCTCTCAGCTGCCAGCCGCTATGTCCTGG...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTCCAGGACATAGCGGCTaGCAGCTGAGAGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: SQYGGFHHPGWLPCRVQCPGHSG*QLRGPT
Trigger: AGTGGGACCTCTCAGCTGCCAGCCGCTATGTCCTGG...ACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTTGTTCTGGTTCCGCTTaGTCCCATGTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFCSGSA*SHVARP
Trigger: GGGCCTGGCCACATGGGACCAAGCGGAACCAGAACA...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCGTCGGGACCTTGTTCTaGTTCCGCTTGGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGVGTLF*FRLVPC
Trigger: ACATGGGACCAAGCGGAACCAGAACAAGGTCCCGAC...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GTGGTAGCTGATGGCAGTTCAGGATGGCTGTTCACATGGTCCAGTGTGGCCCCTACGGAGAGTTGGCCCTaGCCTAGACAGAGTCTACAG +
Preference number: 4 (lower is better)
Translates to: VVADGSSGWLFTWSSVAPTESWP*PRQSLQ
Trigger: CTGTAGACTCTGTCTAGGCCAGGGCCAACTCTCCGT...AGGGGCCACACTGGACCATGTGAACAGCCATCCTGAACTGCCATCAGCTACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR TCA 90 bp CTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGGGAAGCTGCCCACTTTaGAGGTGCGACCATTCTGGC +
Preference number: 4 (lower is better)
Translates to: LYPKSIWWLPSSRMAALQGSCPL*RCDHSG
Trigger: GCCAGAATGGTCGCACCTTCAAAGTGGGCAGCTTCC...CTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGGAAGCTGCCCACTTTaGAGGTGCGACCATTCTGGC +
Preference number: 4 (lower is better)
Translates to: LSAREQSSSPTMALDQTKGSCPL*RCDHSG
Trigger: GCCAGAATGGTCGCACCTTCAAAGTGGGCAGCTTCC...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACGAGGGCTGGCTGGGCTaGGGAGAGCTAGAGGATAAA +
Preference number: 4 (lower is better)
Translates to: QMSLSAREQSSSPTMALDEGWLG*GELEDK
Trigger: TTTATCCTCTAGCTCTCCTCAGCCCAGCCAGCCCTC...GTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGCACTCCTGGTGGGTaGCCCCATGCACACTCAGCT +
Preference number: 4 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPGTPGG*PHAHSA
Trigger: AGCTGAGTGTGCATGGGGTCACCCACCAGGAGTGCC...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGATAGCGGCTGGCAGCTaGGAGGTCCCACTGGTAATG +
Preference number: 4 (lower is better)
Translates to: LSAREQSSSPTMALDQTKIAAGS*EVPLVM
Trigger: CATTACCAGTGGGACCTCTCAGCTGCCAGCCGCTAT...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTAGCTTCCTCTGCATATaGTGTATAGCAGCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSSFLCI*CIAALF
Trigger: GAAAAGAGCTGCTATACATCATATGCAGAGGAAGCT...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCACTGGGACACTCTTaGCACTGGGCAGCGTCCACA +
Preference number: 4 (lower is better)
Translates to: SNVLECKRAIVITHDGPGPLGHS*HWAAST
Trigger: TGTGGACGCTGCCCAGTGGCAAGAGTGTCCCAGTGG...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCAGAAGCGCAGCACGTGTGGGTaGTCCAAGTTCATCATGACC +
Preference number: 4 (lower is better)
Translates to: VGRLDPSWPSQRSFSLQKRSTCG*SKFIMT
Trigger: GGTCATGATGAACTTGGAGCACCCACACGTGCTGCG...CTTCTGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGATGGCTCCCGCCAGCTaGCGCAGGAAGAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMMAPAS*RRKRQS
Trigger: GCTCTGCCTCTTCCTGCGGCAGCTGGCGGGAGCCAT...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TGTAGTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCAATCCCTCACACAACATaGTTCCGAAGGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: CSGQTRSFLAQPKELQPSIPHTT*FRRPGL
Trigger: GAGGCCGGGCCTTCGGAAGCATGTTGTGTGAGGGAT...TGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAATCTGCCAGCGTCACTaGCGAGGCTGGGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPICQRH*RGWEAA
Trigger: GGCAGCTTCCCAGCCTCGGCAGTGACGCTGGCAGAT...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCTCCATAATCTTCCTCTaGAACTCAGGATCGGACAAG +
Preference number: 4 (lower is better)
Translates to: PRWNVYPCRDLVLVPLGPSIIFL*NSGSDK
Trigger: CTTGTCCGATCCTGAGTTGCAGAGGAAGATTATGGA...GGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTTCCATAATCTTCCTCTaGAACTCAGGATCGGACAAG +
Preference number: 4 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLSIIFL*NSGSDK
Trigger: CTTGTCCGATCCTGAGTTGCAGAGGAAGATTATGGA...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGGTAATGCTCCAGGATaGGCCAGCAGTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMGNAPG*ASSQLW
Trigger: CCAGAGCTGACTGCTGGCGCATCCTGGAGCATTACC...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGCCTAGGCTTTTCATaGTGGTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFGLGFS*WCLCPQ
Trigger: CTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCC...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGCATCCTCAGGGCGCCTaGTTCTGTGACATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: KRAIVITHDGPGPNEGSLHPQGA*FCDIPH
Trigger: GTGAGGGATGTCACAGAACCAGGCGCCCTGAGGATG...CAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGGTGCCTCTGTGGACTaGACGGGTGGCTGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMGASVD*TGGWQA
Trigger: GGCTTGCCAGCCACCCGTCCAGTCCACAGAGGCACC...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGTCCATCTATGCTTCCTaGGTGTTGATCTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SIWWLPSSRMAALQSPVWSIYAS*VLISPG
Trigger: GCCCGGGGAGATCAACACCCAGGAAGCATAGATGGA...CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGTAGTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCACCTGGGGCACAGCTCTaGCTTGTCGAATTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: CSGQTRSFLAQPKELQPSPGAQL*LVEFQG
Trigger: CCCCTGAAATTCGACAAGCCAGAGCTGTGCCCCAGG...TGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCACTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGGCTCCTAGTGCTGTCTaGCACTCCTGGTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: GSLGLYPKSIWWLPSSRMAPSAV*HSWWVT
Trigger: GGTCACCCACCAGGAGTGCCAGACAGCACTAGGAGC...CATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCTGGGGCAGGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCCCACATCTCCCCCAGTaGCTCCTAGTGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AGAGASPSHNPYYQHQMSPHLPQ*LLVLSG
Trigger: GCCAGACAGCACTAGGAGCCACTGGGGGAGATGTGG...GGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGATGTTCTGGTTCCGCTTaGTCCCATGTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SNVLECKRAIVITHDGPGCSGSA*SHVARP
Trigger: GGGCCTGGCCACATGGGACCAAGCGGAACCAGAACA...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTGTCGGGACCTTGTTCTaGTTCCGCTTGGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSVGTLF*FRLVPC
Trigger: ACATGGGACCAAGCGGAACCAGAACAAGGTCCCGAC...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCTGGGGCAGGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTGGGATCTCCCCAGGTaGAACGTCTACCCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: AGAGASPSHNPYYQHQMSWDLPR*NVYPCR
Trigger: CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCA...GGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GTGGTAGCTGATGGCAGTTCAGGATGGCTGTTCACATGGTCCAGTGTGGCCCCTAGAAGCCAAGGAGCATaGGAGGGAGGAGACATTTGC +
Preference number: 4 (lower is better)
Translates to: VVADGSSGWLFTWSSVAPRSQGA*EGGDIC
Trigger: GCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCT...AGGGGCCACACTGGACCATGTGAACAGCCATCCTGAACTGCCATCAGCTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTCACCCACGATGGCCCTaGACCAAACGAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LQKPRSMGGRRHLPVPNSHPRWP*TKRRQF
Trigger: AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTG...AGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTCACCCACGATGGCCCTaGACCAAACGAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSHPRWP*TKRRQF
Trigger: AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTG...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTCGTCATCACCCACGATaGCCCTGGACCAAACGAAGG +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFRHHPR*PWTKRR
Trigger: CCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACG...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTACGGAGAGTTGGCCCTaGCCTAGACAGAGTCTACAG +
Preference number: 4 (lower is better)
Translates to: LQKPRSMGGRRHLPVPNSTESWP*PRQSLQ
Trigger: CTGTAGACTCTGTCTAGGCCAGGGCCAACTCTCCGT...AGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR CCA 90 bp AAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGCTGGTACGGAGAGTTaGCCCTGGCCTAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: KRAIVITHDGPGPNEGSLAGTES*PWPRQS
Trigger: ACTCTGTCTAGGCCAGGGCCAACTCTCCGTACCAGC...CAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR TCA 90 bp GTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCAGAAGGCTCCAAGTTCATCATaGCCGATACCTCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: VGRLDPSWPSQRSFSLQKAPSSS*PIPLAG
Trigger: TCCTGCGAGAGGTATCGGTCATGATGAACTTGGAGC...CTTCTGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGCTCAGGTGGAAGAGCTaGTCTACCTTGAGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMLRWKS*STLRFR
Trigger: CCGGAACCTCAAGGTAGATCAGCTCTTCCACCTGAG...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp AGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTCTCAGGTGGAAGAGCTaGTCTACCTTGAGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SQYGGFHHPGWLPCRVQCLRWKS*STLRFR
Trigger: CCGGAACCTCAAGGTAGATCAGCTCTTCCACCTGAG...ACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTAGCTTCCTCTGCATATaGTGTATAGCAGCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RQVGSPQVERLPLSGPCSSFLCI*CIAALF
Trigger: GAAAAGAGCTGCTATACATCATATGCAGAGGAAGCT...AGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp AAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGTCCAGTGTGGTAGCTaGTGGCAGTTCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: KRAIVITHDGPGPNEGSLVQCGS*WQFRMA
Trigger: AGCCATCCTGAACTGCCATCAGCTACCACACTGGAC...CAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGTCCAGTGTGGTAGCTaGTGGCAGTTCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFVQCGS*WQFRMA
Trigger: AGCCATCCTGAACTGCCATCAGCTACCACACTGGAC...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTAGGGCAGAGAGATGTTaGTGCTGGTACGGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LQKPRSMGGRRHLPVPNSRAERC*CWYGEL
Trigger: CAACTCTCCGTACCAGCATCAACATCTCTCTGCCCT...AGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR GCA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCTTTACAAAGTCGAAGTaGTCTGGCCGAGTGACATTA +
Preference number: 4 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTFTKSK*SGRVTL
Trigger: TAATGTCACTCGGCCAGAGCACTTCGACTTTGTAAA...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCGCAGCACGTGTGGGTaGTCCAAGTTCATCATGACC +
Preference number: 4 (lower is better)
Translates to: QMSLSAREQSSSPTMALDRSTCG*SKFIMT
Trigger: GGTCATGATGAACTTGGAGCACCCACACGTGCTGCG...GTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GCTGGGGCAGGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCATCCCTCACACAACATaGTTCCGAAGGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGAGASPSHNPYYQHQMSIPHTT*FRRPGL
Trigger: GAGGCCGGGCCTTCGGAAGCATGTTGTGTGAGGGAT...GGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGAGGTAATGCTCCAGGATaGGCCAGCAGTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SNVLECKRAIVITHDGPGGNAPG*ASSQLW
Trigger: CCAGAGCTGACTGCTGGCGCATCCTGGAGCATTACC...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCGACGAGAAGGCTCCGTaGCGCAGGCTCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SILPASNVLECKRAIVITDEKAP*RRLSGA
Trigger: TGCCCCAGAGAGCCTGCGCCACGGAGCCTTCTCGTC...GGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCATGTGCCTACGGCAGGTaGGATCTCCCCAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPCAYGR*DLPRWN
Trigger: GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACA...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTAGAAGCCAAGGAGCATaGGAGGGAGGAGACATTTGC +
Preference number: 4 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSRSQGA*EGGDIC
Trigger: GCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCT...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGCACCCACGATGGCCCTaGACCAAACGAAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KRAIVITHDGPGPNEGSLHPRWP*TKRRQF
Trigger: AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTG...CAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCTGGGGCAGGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCCGTCATCACCCACGATaGCCCTGGACCAAACGAAGG +
Preference number: 4 (lower is better)
Translates to: AGAGASPSHNPYYQHQMSRHHPR*PWTKRR
Trigger: CCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACG...GGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CAA 72 bp ATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTaGGGCCTATACCCCAAGTCAATATGGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ITHDGPGPNEGS*GLYPKSIWWLP
Trigger: TGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGAGATCGCCCCGACTGTaGGAAGCCCCCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMRSPRL*EAPFPS
Trigger: AGAAGGGAAGGGGGCTTCTCACAGTCGGGGCGATCT...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576812.5
ENST00000639430.1
CDS-3UTR TCA 90 bp TCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGAGAGCTGATCTACCTTaGGGTTCCGGATGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SIWWLPSSRMAALQSPVWRADLP*GSGWQK
Trigger: TTTCTGCCATCCGGAACCTCAAGGTAGATCAGCTCT...CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCTCAGGTGGAAGAGCTaGTCTACCTTGAGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: LDQTKAVWAYTPSQYGGFLRWKS*STLRFR
Trigger: CCGGAACCTCAAGGTAGATCAGCTCTTCCACCTGAG...GAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GTGGTAGCTGATGGCAGTTCAGGATGGCTGTTCACATGGTCCAGTGTGGCCCCTCCAAGTCCTCTTGTTTaGGAATGTAGTGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: VVADGSSGWLFTWSSVAPPSPLV*ECSGQT
Trigger: AGTCTGCCCACTACATTCTCAAACAAGAGGACTTGG...AGGGGCCACACTGGACCATGTGAACAGCCATCCTGAACTGCCATCAGCTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGAGTCCAGTGTGGTAGCTaGTGGCAGTTCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: SNVLECKRAIVITHDGPGVQCGS*WQFRMA
Trigger: AGCCATCCTGAACTGCCATCAGCTACCACACTGGAC...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCAGCTCCATCACCATCTaGAGAGGCTGGCCCAGTACA +
Preference number: 4 (lower is better)
Translates to: LDQTKAVWAYTPSQYGGFSSITI*RGWPST
Trigger: TGTACTGGGCCAGCCTCTGCAGATGGTGATGGAGCT...GAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAATCCCTCACACAACATaGTTCCGAAGGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPIPHTT*FRRPGL
Trigger: GAGGCCGGGCCTTCGGAAGCATGTTGTGTGAGGGAT...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCCAGACTCCTGGAAATaGCTTTCATCCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QMSLSAREQSSSPTMALDPDSWK*LSSSPG
Trigger: CCCTGGAGAGGATGAAAGGCATTTCCAGGAGTCTGG...GTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGAGCAAACAGCACCCTCTaGGATCAGACACTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SNVLECKRAIVITHDGPGANSTL*DQTLEA
Trigger: GGCCTCAAGTGTCTGATCCCAGAGGGTGCTGTTTGC...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAGACGCAGCACGTGTaGGTGCTCCAAGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: QMSLSAREQSSSPTMALDQTQHV*VLQVHH
Trigger: ATGATGAACTTGGAGCACCCACACGTGCTGCGTCTG...GTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCACATCCTCAGGGCGCCTaGTTCTGTGACATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPHPQGA*FCDIPH
Trigger: GTGAGGGATGTCACAGAACCAGGCGCCCTGAGGATG...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTAAGGTGCGACCATTCTaGCCCTTCCAGATTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFKVRPF*PFQIVE
Trigger: CTCCACAATCTGGAAGGGCCAGAATGGTCGCACCTT...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCACCTGGGGCACAGCTCTaGCTTGTCGAATTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPPGAQL*LVEFQG
Trigger: CCCCTGAAATTCGACAAGCCAGAGCTGTGCCCCAGG...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGTGGGATCTCCCCAGGTaGAACGTCTACCCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMWDLPR*NVYPCR
Trigger: CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCA...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTAGAAGCCAAGGAGCATaGGAGGGAGGAGACATTTGC +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFRSQGA*EGGDIC
Trigger: GCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCT...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGGATGGCAGTTCAGGATaGCTGTTCACATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SIWWLPSSRMAALQSPVWDGSSG*LFTWSS
Trigger: ACTGGACCATGTGAACAGCCATCCTGAACTGCCATC...CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCCCAAGTCAATATGGTaGCTTCCATCATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGPKSIW*LPSSRM
Trigger: CATCCTGGATGATGGAAGCCACCATATTGACTTGGG...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACAGAGCTGATCTACCTTaGGGTTCCGGATGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: QMSLSAREQSSSPTMALDRADLP*GSGWQK
Trigger: TTTCTGCCATCCGGAACCTCAAGGTAGATCAGCTCT...GTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATAGCTTCCTCTGCATATaGTGTATAGCAGCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: QVERLPLSGPCSGSAWSHSFLCI*CIAALF
Trigger: GAAAAGAGCTGCTATACATCATATGCAGAGGAAGCT...ATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp TCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAAGCATCAAATGTCCTTaGGTGCAAGAGAGCAATCGT +
Preference number: 4 (lower is better)
Translates to: SAFRSQGAWEGGDICQCPSIKCP*VQESNR
Trigger: ACGATTGCTCTCTTGCACTCAAGGACATTTGATGCT...TGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GTGGTAGCTGATGGCAGTTCAGGATGGCTGTTCACATGGTCCAGTGTGGCCCCTCGCATCCCAAAGATTTaGCTTCTTTCTGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: VVADGSSGWLFTWSSVAPRIPKI*LLSVSI
Trigger: GATGGAGACAGAAAGAAGGCAAATCTTTGGGATGCG...AGGGGCCACACTGGACCATGTGAACAGCCATCCTGAACTGCCATCAGCTACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCGCATCCCAAAGATTTaGCTTCTTTCTGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGRIPKI*LLSVSI
Trigger: GATGGAGACAGAAAGAAGGCAAATCTTTGGGATGCG...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCTGGTGGGTGACCCCATaGACACTCAGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SILPASNVLECKRAIVITWWVTP*TLSSTS
Trigger: GGAGGTGGAGCTGAGTGTGCATGGGGTCACCCACCA...GGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTAAAGTCGAAGTGCTCTaGCCGAGTGACATTAAGCTC +
Preference number: 4 (lower is better)
Translates to: LQKPRSMGGRRHLPVPNSKVEVL*PSDIKL
Trigger: GAGCTTAATGTCACTCGGCCAGAGCACTTCGACTTT...AGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTCCTTGTGCTCAGGGGCAAAACCTCCAAGGATCTTGTAGACCCAGTTCTTAGAGCAAACAGCACCCTCTaGGATCAGACACTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LLVLRGKTSKDLVDPVLRANSTL*DQTLEA
Trigger: GGCCTCAAGTGTCTGATCCCAGAGGGTGCTGTTTGC...TCTAAGAACTGGGTCTACAAGATCCTTGGAGGTTTTGCCCCTGAGCACAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS-3UTR CCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGGCCCTTCCAGATTGTaGAGTCGGGGCTGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMGPSRL*SRGCGK
Trigger: CTTTCCACAGCCCCGACTCCACAATCTGGAAGGGCC...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576812.5
ENST00000639430.1
CDS-3UTR CCA 90 bp TCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCTTGAACCACCCCCTGTaGGACGAGGACCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: SILPASNVLECKRAIVITLNHPL*DEDRGT
Trigger: TGTCCCTCGGTCCTCGTCCCACAGGGGGTGGTTCAA...GGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGCTAGGCTTTTCATGCTaGTGTCTGTGCCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GSLGLYPKSIWWLPSSRMLGFSC*CLCPQK
Trigger: CTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAG...CATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCTGGGGCAGGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCCTAGGCTTTTCATGCTaGTGTCTGTGCCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AGAGASPSHNPYYQHQMSLGFSC*CLCPQK
Trigger: CTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAG...GGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGATGGCAGTTCAGGATaGCTGTTCACATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFDGSSG*LFTWSS
Trigger: ACTGGACCATGTGAACAGCCATCCTGAACTGCCATC...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGATGGCAGTTCAGGATaGCTGTTCACATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: KRAIVITHDGPGPNEGSLDGSSG*LFTWSS
Trigger: ACTGGACCATGTGAACAGCCATCCTGAACTGCCATC...CAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGATGGCAGTTCAGGATaGCTGTTCACATGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LSAREQSSSPTMALDQTKDGSSG*LFTWSS
Trigger: ACTGGACCATGTGAACAGCCATCCTGAACTGCCATC...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGCCCAAGTCAATATGGTaGCTTCCATCATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SIWWLPSSRMAALQSPVWPKSIW*LPSSRM
Trigger: CATCCTGGATGATGGAAGCCACCATATTGACTTGGG...CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGCAAACGAAGGCAGTTTaGGCCTATACCCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: SIWWLPSSRMAALQSPVWQTKAV*AYTPSQ
Trigger: TTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTG...CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGTTACTTAATGAACCCTaGAATGGGGCCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LYPKSIWWLPSSRMAALQLLNEP*NGARAE
Trigger: CTCTGCCCTGGCCCCATTCCAGGGTTCATTAAGTAA...CTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR TCA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGCTCCAAGTTCATCATaGCCGATACCTCTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPAPSSS*PIPLAG
Trigger: TCCTGCGAGAGGTATCGGTCATGATGAACTTGGAGC...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp CTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGCCAAGTCCTCTTGTTTaGGAATGTAGTGGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LYPKSIWWLPSSRMAALQPSPLV*ECSGQT
Trigger: AGTCTGCCCACTACATTCTCAAACAAGAGGACTTGG...CTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTAGCATCAAATGTCCTTaGGTGCAAGAGAGCAATCGT +
Preference number: 4 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSSIKCP*VQESNR
Trigger: ACGATTGCTCTCTTGCACTCAAGGACATTTGATGCT...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGAGCTCCATCACCATCTaGAGAGGCTGGCCCAGTACA +
Preference number: 4 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMSSITI*RGWPST
Trigger: TGTACTGGGCCAGCCTCTGCAGATGGTGATGGAGCT...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCAAACAGCACCCTCTaGGATCAGACACTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMANSTL*DQTLEA
Trigger: GGCCTCAAGTGTCTGATCCCAGAGGGTGCTGTTTGC...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGACCTCTGGCCCCGTGCTaGGGGCGCATCCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: ASPSHNPYYQHQMSLSARPLAPC*GRIPKI
Trigger: AATCTTTGGGATGCGCCCCCAGCACGGGGCCAGAGG...TCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp AAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGCAAACGAAGGCAGTTTaGGCCTATACCCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: KRAIVITHDGPGPNEGSLQTKAV*AYTPSQ
Trigger: TTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTG...CAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCAGAAGAGCTTCCTCTGCATATaGTGTATAGCAGCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: VGRLDPSWPSQRSFSLQKSFLCI*CIAALF
Trigger: GAAAAGAGCTGCTATACATCATATGCAGAGGAAGCT...CTTCTGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp TCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCGCAGCACGTGTGGGTaGTCCAAGTTCATCATGACC +
Preference number: 4 (lower is better)
Translates to: SILPASNVLECKRAIVITRSTCG*SKFIMT
Trigger: GGTCATGATGAACTTGGAGCACCCACACGTGCTGCG...GGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGTCCATAATCTTCCTCTaGAACTCAGGATCGGACAAG +
Preference number: 4 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMSIIFL*NSGSDK
Trigger: CTTGTCCGATCCTGAGTTGCAGAGGAAGATTATGGA...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCTGGGGCAGGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCAAAGTCGAAGTGCTCTaGCCGAGTGACATTAAGCTC +
Preference number: 4 (lower is better)
Translates to: AGAGASPSHNPYYQHQMSKVEVL*PSDIKL
Trigger: GAGCTTAATGTCACTCGGCCAGAGCACTTCGACTTT...GGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAGCCAGCAGTCAGCTCTaGACCGGCTACTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ASPSHNPYYQHQMSLSARASSQL*TGYSGG
Trigger: TCCACCTGAGTAGCCGGTCCAGAGCTGACTGCTGGC...TCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGCCCAAGTCAATATGGTaGCTTCCATCATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GSLGLYPKSIWWLPSSRMPKSIW*LPSSRM
Trigger: CATCCTGGATGATGGAAGCCACCATATTGACTTGGG...CATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp CTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCAAACGAAGGCAGTTTaGGCCTATACCCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LDQTKAVWAYTPSQYGGFQTKAV*AYTPSQ
Trigger: TTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTG...GAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGCGCATCCCAAAGATTTaGCTTCTTTCTGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: GSLGLYPKSIWWLPSSRMRIPKI*LLSVSI
Trigger: GATGGAGACAGAAAGAAGGCAAATCTTTGGGATGCG...CATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp GCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGACATCCTCAGGGCGCCTaGTTCTGTGACATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: ASPSHNPYYQHQMSLSARHPQGA*FCDIPH
Trigger: GTGAGGGATGTCACAGAACCAGGCGCCCTGAGGATG...TCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CCA 90 bp TCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCAAGGTGCGACCATTCTaGCCCTTCCAGATTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SILPASNVLECKRAIVITKVRPF*PFQIVE
Trigger: CTCCACAATCTGGAAGGGCCAGAATGGTCGCACCTT...GGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp GCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGACGCAGCACGTGTGGGTaGTCCAAGTTCATCATGACC +
Preference number: 4 (lower is better)
Translates to: ASPSHNPYYQHQMSLSARRSTCG*SKFIMT
Trigger: GGTCATGATGAACTTGGAGCACCCACACGTGCTGCG...TCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR GCA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCACGCATCCCAAAGATTTaGCTTCTTTCTGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPRIPKI*LLSVSI
Trigger: GATGGAGACAGAAAGAAGGCAAATCTTTGGGATGCG...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGAGCATCAAATGTCCTTaGGTGCAAGAGAGCAATCGT +
Preference number: 4 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMSIKCP*VQESNR
Trigger: ACGATTGCTCTCTTGCACTCAAGGACATTTGATGCT...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
3UTR CAA 72 bp CCATCTCATAATCCATACTACCAGCATCAAATGTCCTaGAGTGCAAGAGAGCAATCGTCATCACCCACGATG +
Preference number: 4 (lower is better)
Translates to: PSHNPYYQHQMS*SAREQSSSPTM
Trigger: CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR TCA 90 bp GCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAAGCATCAAATGTCCTTaGGTGCAAGAGAGCAATCGT +
Preference number: 4 (lower is better)
Translates to: ASPSHNPYYQHQMSLSARSIKCP*VQESNR
Trigger: ACGATTGCTCTCTTGCACTCAAGGACATTTGATGCT...TCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS GCA 90 bp GTGCGCGGCGACGCCAGCAGTAGGTTGCGCGTAGCGAGGTCTCGGTaGACCAGCCCGCGGGCCCCCAGGTACGCCATGGCTCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: VRGDASSRLRVARSR*TSPRAPRYAMAPAS
Trigger: GCTGGCGGGAGCCATGGCGTACCTGGGGGCCCGCGGGCTGGTGCACCGAGACCTCGCTACGCGCAACCTACTGCTGGCGTCGCCGCGCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GGCCCGGCCTCTTGCAGCAGCCCCTCCAGGTGGGAAAAGCTAGGCCGGTCGGCACGAAGGCCCGGCCTCTaGCAGCAGCCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: GPASCSSPSRWEKLGRSARRPGL*QQPLQV
Trigger: CACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTCG...TGCCGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS-3UTR CAA 90 bp GGCCTCTTGCAGCAGCCCCTCCAGGTGGGAAAAGCTAGGCCGGTCGGCAGGGTGCGAAGGCCCGGCCTCTaGCAGCAGCCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: GLLQQPLQVGKARPVGRVRRPGL*QQPLQV
Trigger: CACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTCG...CACCCTGCCGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCTGCAAGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000577009.1
ENST00000640394.1
CDS TCA 90 bp CGTGGCGCAGGCTCTCTGGGGCACACCTGCCGAAGGAAGTGGAGCTaGAAGGGGCGGGACACGTGCTCCTTGGAGGCCCACCCTCCACGG +
Preference number: 5 (lower is better)
Translates to: RGAGSLGHTCRRKWS*KGRDTCSLEAHPPR
Trigger: CCGTGGAGGGTGGGCCTCCAAGGAGCACGTGTCCCGCCCCTTTCAGCTCCACTTCCTTCGGCAGGTGTGCCCCAGAGAGCCTGCGCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576136.1
ENST00000638332.1
CDS CCA 90 bp CCACACGTCCGAGGCAGACGAGAAGGCTCCGTGGCGCAGGCTCTCTaGGGCACACCTGCCGAAGGAAGTGGAGCTGAAAGGGGCGGGACA +
Preference number: 5 (lower is better)
Translates to: PHVRGRREGSVAQAL*GTPAEGSGAERGGT
Trigger: TGTCCCGCCCCTTTCAGCTCCACTTCCTTCGGCAGGTGTGCCCCAGAGAGCCTGCGCCACGGAGCCTTCTCGTCTGCCTCGGACGTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576136.1
ENST00000638332.1
CDS-3UTR CAA 90 bp CGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTCGAAGGCCCGGCCTCTaGCAGCAGCCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: RQVGSPQVERLPLSGPCSRRPGL*QQPLQV
Trigger: CACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTCG...AGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCGAAGGCCCGGCCTCTaGCAGCAGCCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTRRPGL*QQPLQV
Trigger: CACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTCG...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 90 bp CCTGCCGAAGGAAGTGGAGCTGAAAGGGGCGGGACACGTGCTCCTTaGAGGCCCACCCTCCACGGAGCACCCCCGAGTGCACCCATCTTT +
Preference number: 5 (lower is better)
Translates to: PAEGSGAERGGTRAP*RPTLHGAPPSAPIF
Trigger: AAAGATGGGTGCACTCGGGGGTGCTCCGTGGAGGGTGGGCCTCCAAGGAGCACGTGTCCCGCCCCTTTCAGCTCCACTTCCTTCGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576136.1
ENST00000638332.1
CDS-3UTR CAA 90 bp GTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCGAAGTCAGCCACCTaGATGGTGCGCGGCGACGCC +
Preference number: 5 (lower is better)
Translates to: VYPCRDLVLVPLGPMWPGPKSAT*MVRGDA
Trigger: GGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCGG...GCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS GCA 90 bp TGTGGCCAGGCCCTCAGGGGCCTAGGCTTTTCATGCTGGTGTCTGTaGCCGCAGAAGCTGAGCTCAGGGCCTGGCCAGGACATAGCGGCT +
Preference number: 5 (lower is better)
Translates to: CGQALRGLGFSCWCL*PQKLSSGPGQDIAA
Trigger: AGCCGCTATGTCCTGGCCAGGCCCTGAGCTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCCCCTGAGGGCCTGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 90 bp CATGAAGAACAGAGGGGGCAGCTGGCCTGGATGAAGCGGGCTCCCTaGACACTCACACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: HEEQRGQLAWMKRAP*TLTLLPLGSVHSPR
Trigger: CCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTGAGTGTCCAGGGAGCCCGCTTCATCCAGGCCAGCTGCCCCCTCTGTTCTTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575268.1
ENST00000640398.1
CDS-3UTR CAA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTATGCTTCCTGGGTGTaGATCTCCCCGGGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTYASWV*ISPGRG
Trigger: ACCCCTGCCCGGGGAGATCAACACCCAGGAAGCATA...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCGGAGGGAGGAGACATTaGCCAGTGCCCAACTCTGGG +
Preference number: 5 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTGGRRH*PVPNSG
Trigger: CCCAGAGTTGGGCACTGGCAAATGTCTCCTCCCTCC...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS TCA 90 bp CCGCATCTGCCAGCGTCACTGCCGAGGCTGGGAAGCTGCCCACTTTaGAGGTGCGACCATTCTGGCCCTTCCAGATTGTGGAGTCGGGGC +
Preference number: 5 (lower is better)
Translates to: PHLPASLPRLGSCPL*RCDHSGPSRLWSRG
Trigger: GCCCCGACTCCACAATCTGGAAGGGCCAGAATGGTCGCACCTTCAAAGTGGGCAGCTTCCCAGCCTCGGCAGTGACGCTGGCAGATGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS TCA 90 bp CAGAAGCTGAGCTCAGGGCCTGGCCAGGACATAGCGGCTGGCAGCTaGGAGGTCCCACTGGTAATGCTCCAGGATGCGCCAGCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: QKLSSGPGQDIAAGS*EVPLVMLQDAPAVS
Trigger: GCTGACTGCTGGCGCATCCTGGAGCATTACCAGTGGGACCTCTCAGCTGCCAGCCGCTATGTCCTGGCCAGGCCCTGAGCTCAGCTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS GCA 90 bp TGGACACTCACACTCTTGCCACTGGGCAGCGTCCACAGCCCTCGGTaGACCACACCGAAGCAGCCTGAACCCAGCAGCTCCCCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: WTLTLLPLGSVHSPR*TTPKQPEPSSSPLQ
Trigger: TTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTGAGTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575268.1
ENST00000640398.1
CDS-3UTR CAA 90 bp CCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCCCTACCCGGAGGGACTaGACAGCCACTGGGACACTC +
Preference number: 5 (lower is better)
Translates to: PRWNVYPCRDLVLVPLGPPTRRD*TATGTL
Trigger: GAGTGTCCCAGTGGCTGTCAAGTCCCTCCGGGTAGG...GGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTGACGCCAGCAGTAGGTaGCGCGTAGCGAGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: GSPQVERLPLSGPCSGSADASSR*RVARSR
Trigger: CCGAGACCTCGCTACGCGCAACCTACTGCTGGCGTC...AGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGTCTGGCCCTTCCAGATaGTGGAGTCGGGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRSGPSR*WSRGCG
Trigger: TCCACAGCCCCGACTCCACAATCTGGAAGGGCCAGA...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000576812.5
ENST00000639430.1
CDS-3UTR CAA 90 bp GTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCGGGAAGCTGCCCACTTaGAAGGTGCGACCATTCTGG +
Preference number: 5 (lower is better)
Translates to: VPTAGGISPGGTSTPVGTGKLPT*KVRPFW
Trigger: CCAGAATGGTCGCACCTTCAAAGTGGGCAGCTTCCC...GGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTTGTTCTGGTTCCGCTaGGTCCCATGTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: SGLLLHVPTAGGISPGGTLFWFR*VPCGQA
Trigger: GGCCTGGCCACATGGGACCAAGCGGAACCAGAACAA...CGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGACCCCTGTCGGGACCTaGTTCTGGTTCCGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SGLLLHVPTAGGISPGGTTPVGT*FWFRLV
Trigger: GACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGT...CGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGGAGGGAGGAGACATTaGCCAGTGCCCAACTCTGGG +
Preference number: 5 (lower is better)
Translates to: PCAYGRWDLPRWNVYPCRGGRRH*PVPNSG
Trigger: CCCAGAGTTGGGCACTGGCAAATGTCTCCTCCCTCC...CCGACAGGGGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 90 bp CGGATGGCAGAAACCACATCTCCCCCAGTGGCTCCTAGTGCTGTCTaGCACTCCTGGTGGGTGACCCCATGCACACTCAGCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: RMAETTSPPVAPSAV*HSWWVTPCTLSSTS
Trigger: GGAGGTGGAGCTGAGTGTGCATGGGGTCACCCACCAGGAGTGCCAGACAGCACTAGGAGCCACTGGGGGAGATGTGGTTTCTGCCATCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GGATCTCCCCAGGTGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTCTGGCCCTTCCAGATaGTGGAGTCGGGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: GSPQVERLPLSGPCSGSASGPSR*WSRGCP
Trigger: AGGGCAGCCCCGACTCCACAATCTGGAAGGGCCAGA...AGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCACCTGGGGAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS TCA 90 bp TTTCTTTTGGGCCAGGGAAGCCTCTCCCTAGAGGGCTGGCTGGGCTaGGGAGAGCTAGAGGATAAAGGTGGGCGTGGAGGCAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: FLLGQGSLSLEGWLG*GELEDKGGRGGRPG
Trigger: TCCAGGCCTGCCTCCACGCCCACCTTTATCCTCTAGCTCTCCTCAGCCCAGCCAGCCCTCTAGGGAGAGGCTTCCCTGGCCCAAAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS GCA 90 bp AGAGGCTGGCCCAGTACAAGGCCGTGCAGACGCAGCACGTGTGGGTaGTCCAAGTTCATCATGACCGATACCTCTCGCAGGAAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: RGWPSTRPCRRSTCG*SKFIMTDTSRRKSP
Trigger: GGGGGACTTCCTGCGAGAGGTATCGGTCATGATGAACTTGGAGCACCCACACGTGCTGCGTCTGCACGGCCTTGTACTGGGCCAGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS GCA 90 bp CATAGCGGCTGGCAGCTGAGAGGTCCCACTGGTAATGCTCCAGGATaGGCCAGCAGTCAGCTCTGGACCGGCTACTCAGGTGGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: HSGWQLRGPTGNAPG*ASSQLWTGYSGGRA
Trigger: AGCTCTTCCACCTGAGTAGCCGGTCCAGAGCTGACTGCTGGCGCATCCTGGAGCATTACCAGTGGGACCTCTCAGCTGCCAGCCGCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 90 bp ACTGCCGAGGCTGGGAAGCTGCCCACTTTGAAGGTGCGACCATTCTaGCCCTTCCAGATTGTGGAGTCGGGGCTGCCCTCGATGACTGTG +
Preference number: 5 (lower is better)
Translates to: TAEAGKLPTLKVRPF*PFQIVESGLPSMTV
Trigger: CACAGTCATCGAGGGCAGCCCCGACTCCACAATCTGGAAGGGCCAGAATGGTCGCACCTTCAAAGTGGGCAGCTTCCCAGCCTCGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR CAA 90 bp TGGAACGTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCTACCCGGAGGGACTaGACAGCCACTGGGACACTC +
Preference number: 5 (lower is better)
Translates to: WNVYPCRDLVLVPLGPMWPTRRD*TATGTL
Trigger: GAGTGTCCCAGTGGCTGTCAAGTCCCTCCGGGTAGG...CCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGACGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAACTCTCCGAAGTCAGCCACCTaGATGGTGCGCGGCGACGCC +
Preference number: 5 (lower is better)
Translates to: LQKPRSMGGRRHLPVPNSPKSAT*MVRGDA
Trigger: GGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCGG...AGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GAGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTCCGAAGTCAGCCACCTaGATGGTGCGCGGCGACGCC +
Preference number: 5 (lower is better)
Translates to: ELQPSEAKEHGREETFASPKSAT*MVRGDA
Trigger: GGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCGG...ACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS TCA 90 bp CAAGGCCGTGCAGACGCAGCACGTGTGGGTGCTCCAAGTTCATCATaGCCGATACCTCTCGCAGGAAGTCCCCCAGTTCTGTGCCCATCG +
Preference number: 5 (lower is better)
Translates to: QGRADAARVGAPSSS*PIPLAGSPPVLCPS
Trigger: CGATGGGCACAGAACTGGGGGACTTCCTGCGAGAGGTATCGGTCATGATGAACTTGGAGCACCCACACGTGCTGCGTCTGCACGGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS GCA 90 bp GCCAGCTCCATCACCATCTGCAGAGGCTGGCCCAGTACAAGGCCGTaGAGACGCAGCACGTGTGGGTGCTCCAAGTTCATCATGACCGAT +
Preference number: 5 (lower is better)
Translates to: ASSITICRGWPSTRP*RRSTCGCSKFIMTD
Trigger: ATCGGTCATGATGAACTTGGAGCACCCACACGTGCTGCGTCTGCACGGCCTTGTACTGGGCCAGCCTCTGCAGATGGTGATGGAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 90 bp CTGGGCTGTGGGAGGCCAGAATCAGGGCTGGAGTGGAGGTGGGTGTaGGGAAGAGTGCGGAGAGACTTACAGGGAAGAAAAGGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LGCGRPESGLEWRWV*GRVRRDLQGRKGLE
Trigger: TTCCAGCCCTTTTCTTCCCTGTAAGTCTCTCCGCACTCTTCCCCACACCCACCTCCACTCCAGCCCTGATTCTGGCCTCCCACAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000574794.1
ENST00000575268.1
ENST00000639903.1
ENST00000640398.1
CDS CCA 90 bp TTAGGCCCAGAACGTAGCCTTTTCAGAGCTTCGGACAGTCTGCGCTaGGCTGTGGGAGGCCAGAATCAGGGCTGGAGTGGAGGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: LGPERSLFRASDSLR*AVGGQNQGWSGGGC
Trigger: ACACCCACCTCCACTCCAGCCCTGATTCTGGCCTCCCACAGCCCAGCGCAGACTGTCCGAAGCTCTGAAAAGGCTACGTTCTGGGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000574794.1
ENST00000575268.1
ENST00000639903.1
ENST00000640398.1
CDS CCA 90 bp CTGCAGAGGCTGGCCCAGTACAAGGCCGTGCAGACGCAGCACGTGTaGGTGCTCCAAGTTCATCATGACCGATACCTCTCGCAGGAAGTC +
Preference number: 5 (lower is better)
Translates to: LQRLAQYKAVQTQHV*VLQVHHDRYLSQEV
Trigger: GACTTCCTGCGAGAGGTATCGGTCATGATGAACTTGGAGCACCCACACGTGCTGCGTCTGCACGGCCTTGTACTGGGCCAGCCTCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 90 bp CTCGATGACTGTGATGGGGTCACCAGTCTCCATCCTCAGGGCGCCTaGTTCTGTGACATCCCTCACACAACATGCTTCCGAAGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LDDCDGVTSLHPQGA*FCDIPHTTCFRRPG
Trigger: GCCGGGCCTTCGGAAGCATGTTGTGTGAGGGATGTCACAGAACCAGGCGCCCTGAGGATGGAGACTGGTGACCCCATCACAGTCATCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000570896.5
ENST00000576136.1
ENST00000576812.5
ENST00000638332.1
ENST00000639010.1
ENST00000639430.1
CDS CCA 90 bp CTTTTCATGCTGGTGTCTGTGCCCGCAGAAGCTGAGCTCAGGGCCTaGCCAGGACATAGCGGCTGGCAGCTGAGAGGTCCCACTGGTAAT +
Preference number: 5 (lower is better)
Translates to: LFMLVSVPAEAELRA*PGHSGWQLRGPTGN
Trigger: ATTACCAGTGGGACCTCTCAGCTGCCAGCCGCTATGTCCTGGCCAGGCCCTGAGCTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACGAAGGCCCGGCCTCTaGCAGCAGCCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SNVLECKRAIVITHDGPGRRPGL*QQPLQV
Trigger: CACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTCG...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTCAGGGCAGAGAGATGTaGATGCTGGTACGGAGAGTT +
Preference number: 5 (lower is better)
Translates to: GLLLHVPTAGGISPGGTSQGREM*MLVRRV
Trigger: AACTCTCCGTACCAGCATCAACATCTCTCTGCCCTG...AGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS GCA 90 bp GACACGTGCTCCTTGGAGGCCCACCCTCCACGGAGCACCCCCGAGTaGACCCATCTTTCACAAAAGTCCTCTTTGCCTAGGAGGATAACC +
Preference number: 5 (lower is better)
Translates to: DTCSLEAHPPRSTPE*THLSQKSSLPRRIT
Trigger: GGTTATCCTCCTAGGCAAAGAGGACTTTTGTGAAAGATGGGTGCACTCGGGGGTGCTCCGTGGAGGGTGGGCCTCCAAGGAGCACGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576136.1
ENST00000638332.1
CDS-3UTR CAA 90 bp CAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAATCTGGCCCTTCCAGATaGTGGAGTCGGGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: QPSEAKEHGREETFASAQSGPSR*WSRGCG
Trigger: TCCACAGCCCCGACTCCACAATCTGGAAGGGCCAGA...TTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576812.5
ENST00000639430.1
CDS-3UTR CAA 90 bp TCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCATATGCTTCCTGGGTGTaGATCTCCCCGGGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: SAFRSQGAWEGGDICQCPYASWV*ISPGRG
Trigger: ACCCCTGCCCGGGGAGATCAACACCCAGGAAGCATA...TGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAATTGTTCTGGTTCCGCTaGGTCCCATGTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: QPSEAKEHGREETFASAQLFWFR*VPCGQA
Trigger: GGCCTGGCCACATGGGACCAAGCGGAACCAGAACAA...TTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp AGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCTTGTTCTGGTTCCGCTaGGTCCCATGTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RAIVITHDGPGPNEGSLGLFWFR*VPCGQA
Trigger: GGCCTGGCCACATGGGACCAAGCGGAACCAGAACAA...GCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAAACCCCTGTCGGGACCTaGTTCTGGTTCCGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: QPSEAKEHGREETFASAQTPVGT*FWFRLV
Trigger: GACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGT...TTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GGCCCTCAGGGGCCTAGGCTTTTCATGCTGGTGTCTGTGCCCGCAGAAGCTGAGCCAAACGAAGGCAGTTaGGGCCTATACCCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: GPQGPRLFMLVSVPAEAEPNEGS*GLYPKS
Trigger: TGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGG...CTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCCCCTGAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGTCTACCCCAAACGAAGGCAGTTaGGGCCTATACCCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: LLLHVPTAGGISPGGTSTPNEGS*GLYPKS
Trigger: TGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGG...GGTAGACGTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTCAGCATCAAATGTCCTaGAGTGCAAGAGAGCAATCG +
Preference number: 5 (lower is better)
Translates to: RDLVLVPLGPMWPGPQGPQHQMS*SAREQS
Trigger: CGATTGCTCTCTTGCACTCAAGGACATTTGATGCTG...AGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTCAGGGCAGAGAGATGTaGATGCTGGTACGGAGAGTT +
Preference number: 5 (lower is better)
Translates to: LVLVPLGPMWPGPQGPRLQGREM*MLVRRV
Trigger: AACTCTCCGTACCAGCATCAACATCTCTCTGCCCTG...AAGCCTAGGCCCCTGAGGGCCTGGCCACATGGGACCAAGCGGAACCAGAACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR CAA 90 bp TCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTGCCCAGGGAAGCTGCCCACTTaGAAGGTGCGACCATTCTGG +
Preference number: 5 (lower is better)
Translates to: SAFRSQGAWEGGDICQCPGKLPT*KVRPFW
Trigger: CCAGAATGGTCGCACCTTCAAAGTGGGCAGCTTCCC...TGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTATGCTTCCTGGGTGTaGATCTCCCCGGGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: CKRAIVITHDGPGPNEGSYASWV*ISPGRG
Trigger: ACCCCTGCCCGGGGAGATCAACACCCAGGAAGCATA...ACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CTCTGGGCTCCTCCTCCATGTGCCTACGGCAGGTGGGATCTCCCCAGGTGGAACGCGCATCCCAAAGATTaGCCTTCTTTCTGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: LWAPPPCAYGRWDLPRWNAHPKD*PSFCLH
Trigger: ATGGAGACAGAAAGAAGGCAAATCTTTGGGATGCGC...GTTCCACCTGGGGAGATCCCACCTGCCGTAGGCACATGGAGGAGGAGCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp AGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTTCTGGCCCTTCCAGATaGTGGAGTCGGGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: SQYGGFHHPGWLPCRVQCSGPSR*WSRGCP
Trigger: AGGGCAGCCCCGACTCCACAATCTGGAAGGGCCAGA...ACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS-3UTR CAA 90 bp GCTGGGGCAGGGGCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCCCTACCCGGAGGGACTaGACAGCCACTGGGACACTC +
Preference number: 5 (lower is better)
Translates to: AGAGASPSHNPYYQHQMSPTRRD*TATGTL
Trigger: GAGTGTCCCAGTGGCTGTCAAGTCCCTCCGGGTAGG...GGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCCTACCCGGAGGGACTaGACAGCCACTGGGACACTC +
Preference number: 5 (lower is better)
Translates to: LDQTKAVWAYTPSQYGGFPTRRD*TATGTL
Trigger: GAGTGTCCCAGTGGCTGTCAAGTCCCTCCGGGTAGG...GAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp AGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTTATGCTTCCTGGGTGTaGATCTCCCCGGGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: SQYGGFHHPGWLPCRVQCYASWV*ISPGRG
Trigger: ACCCCTGCCCGGGGAGATCAACACCCAGGAAGCATA...ACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TGTAGTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCATTGTTCTGGTTCCGCTaGGTCCCATGTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: CSGQTRSFLAQPKELQPSLFWFR*VPCGQA
Trigger: GGCCTGGCCACATGGGACCAAGCGGAACCAGAACAA...TGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCACTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGACCCCTGTCGGGACCTaGTTCTGGTTCCGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMTPVGT*FWFRLV
Trigger: GACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGT...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TGTAGTGGGCAGACTAGATCCTTCTTGGCCCAGCCAAAGGAGCTTCAGCCTTCAGGAGGGAGGAGACATTaGCCAGTGCCCAACTCTGGG +
Preference number: 5 (lower is better)
Translates to: CSGQTRSFLAQPKELQPSGGRRH*PVPNSG
Trigger: CCCAGAGTTGGGCACTGGCAAATGTCTCCTCCCTCC...TGAAGGCTGAAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCACTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GTCTACCCCTGTCGGGACCTTGTTCTGGTTCCGCTTGGTCCCATGTGGCCAGGCCAGCATCAAATGTCCTaGAGTGCAAGAGAGCAATCG +
Preference number: 5 (lower is better)
Translates to: VYPCRDLVLVPLGPMWPGQHQMS*SAREQS
Trigger: CGATTGCTCTCTTGCACTCAAGGACATTTGATGCTG...GCCTGGCCACATGGGACCAAGCGGAACCAGAACAAGGTCCCGACAGGGGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACTGTGGGGGTTTTCTTTaGGGCCAGGGAAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: QMSLSAREQSSSPTMALDCGGFL*GQGSLS
Trigger: GGAGAGGCTTCCCTGGCCCAAAAGAAAACCCCCACA...GTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGTGTGGGGGTTTTCTTTaGGGCCAGGGAAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RWPWTKRRQFGPIPQVNMCGGFL*GQGSLS
Trigger: GGAGAGGCTTCCCTGGCCCAAAAGAAAACCCCCACA...CATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGACGAAGGCCCGGCCTCTaGCAGCAGCCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: ASPSHNPYYQHQMSLSARRRPGL*QQPLQV
Trigger: CACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTCG...TCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGGGCCGCGCATCCCAAAGATTaGCCTTCTTTCTGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: EQSSSPTMALDQTKAVWAAHPKD*PSFCLH
Trigger: ATGGAGACAGAAAGAAGGCAAATCTTTGGGATGCGC...GGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGATGTGGGGGTTTTCTTTaGGGCCAGGGAAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SNVLECKRAIVITHDGPGCGGFL*GQGSLS
Trigger: GGAGAGGCTTCCCTGGCCCAAAAGAAAACCCCCACA...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGAGTCCAGTGTGGCAGACTAGATCCTTCTaGGCCCAGCCAAAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: SIWWLPSSRMAALQSPVWQTRSF*AQPKEL
Trigger: AAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTG...CCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GAGCTTCAGCCTTCAGAAGCCAAGGAGCATGGGAGGGAGGAGACATTTGCCAGTCAGACTAGATCCTTCTaGGCCCAGCCAAAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: ELQPSEAKEHGREETFASQTRSF*AQPKEL
Trigger: AAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTG...ACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 90 bp GCCAATGCCGTCCAGGTCCTCAGGCTTTACAAAGTCGAAGTGCTCTaGCCGAGTGACATTAAGCTCCTCAAGGATGGGCCAGTAAAACTG +
Preference number: 5 (lower is better)
Translates to: ANAVQVLRLYKVEVL*PSDIKLLKDGPVKL
Trigger: CAGTTTTACTGGCCCATCCTTGAGGAGCTTAATGTCACTCGGCCAGAGCACTTCGACTTTGTAAAGCCTGAGGACCTGGACGGCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000570896.5
ENST00000574794.1
ENST00000575268.1
ENST00000576207.2
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
ENST00000639903.1
ENST00000640398.1
ENST00000640785.1
CDS-3UTR CAA 90 bp GCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGACCGAAGTCAGCCACCTaGATGGTGCGCGGCGACGCC +
Preference number: 5 (lower is better)
Translates to: ASPSHNPYYQHQMSLSARPKSAT*MVRGDA
Trigger: GGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCGG...TCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CTATACCCCAAGTCAATATGGTGGCTTCCATCATCCAGGATGGCTGCCCTGCAGCCAAACGAAGGCAGTTaGGGCCTATACCCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: LYPKSIWWLPSSRMAALQPNEGS*GLYPKS
Trigger: TGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGG...CTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACTTGGGGTATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGGGAAGCTGCCCACTTaGAAGGTGCGACCATTCTGG +
Preference number: 5 (lower is better)
Translates to: YQHQMSLSAREQSSSPTMGKLPT*KVRPFW
Trigger: CCAGAATGGTCGCACCTTCAAAGTGGGCAGCTTCCC...CATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCGGGAAGCTGCCCACTTaGAAGGTGCGACCATTCTGG +
Preference number: 5 (lower is better)
Translates to: SILPASNVLECKRAIVITGKLPT*KVRPFW
Trigger: CCAGAATGGTCGCACCTTCAAAGTGGGCAGCTTCCC...GGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp CAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGGCAGTTTGCGCATCCCAAAGATTaGCCTTCTTTCTGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: QESNRHHPRWPWTKRRQFAHPKD*PSFCLH
Trigger: ATGGAGACAGAAAGAAGGCAAATCTTTGGGATGCGC...AAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCTGTGGGGGTTTTCTTTaGGGCCAGGGAAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SILPASNVLECKRAIVITCGGFL*GQGSLS
Trigger: GGAGAGGCTTCCCTGGCCCAAAAGAAAACCCCCACA...GGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp ACGAAGGCAGTTTGGGCCTATACCCCAAGTCAATATGGTGGCTTCCATCATCCACCAAACGAAGGCAGTTaGGGCCTATACCCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: TKAVWAYTPSQYGGFHHPPNEGS*GLYPKS
Trigger: TGACTTGGGGTATAGGCCCAAACTGCCTTCGTTTGG...TGGATGATGGAAGCCACCATATTGACTTGGGGTATAGGCCCAAACTGCCTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGACCAAACGAAGCAGCATCAAATGTCCTaGAGTGCAAGAGAGCAATCG +
Preference number: 5 (lower is better)
Translates to: LSAREQSSSPTMALDQTKQHQMS*SAREQS
Trigger: CGATTGCTCTCTTGCACTCAAGGACATTTGATGCTG...CTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp TCAAATGTCCTTGAGTGCAAGAGAGCAATCGTCATCACCCACGATGGCCCTGGAGCGCATCCCAAAGATTaGCCTTCTTTCTGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: SNVLECKRAIVITHDGPGAHPKD*PSFCLH
Trigger: ATGGAGACAGAAAGAAGGCAAATCTTTGGGATGCGC...TCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCAAGGACATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGAGGAGGGAGGAGACATTaGCCAGTGCCCAACTCTGGG +
Preference number: 5 (lower is better)
Translates to: ASPSHNPYYQHQMSLSARGGRRH*PVPNSG
Trigger: CCCAGAGTTGGGCACTGGCAAATGTCTCCTCCCTCC...TCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS-3UTR CAA 90 bp GCTAGTCCATCTCATAATCCATACTACCAGCATCAAATGTCCTTGAGTGCAAGACAGACTAGATCCTTCTaGGCCCAGCCAAAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: ASPSHNPYYQHQMSLSARQTRSF*AQPKEL
Trigger: AAGCTCCTTTGGCTGGGCCAAGAAGGATCTAGTCTG...TCTTGCACTCAAGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CAA 90 bp CCCCGGGCACCGCCCAGAGGCCGCACCAGCCCGAAGTCAGCCACCTaGATGGTGCGCGGCGACGCCAGCAGTAGGTTGCGCGTAGCGAGG +
Preference number: 6 (lower is better)
Translates to: PRAPPRGRTSPKSAT*MVRGDASSRLRVAR
Trigger: CCTCGCTACGCGCAACCTACTGCTGGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCGGGCTGGTGCGGCCTCTGGGCGGTGCCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CAA 90 bp CCGAAGTCAGCCACCTTGATGGTGCGCGGCGACGCCAGCAGTAGGTaGCGCGTAGCGAGGTCTCGGTGCACCAGCCCGCGGGCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: PKSATLMVRGDASSR*RVARSRCTSPRAPR
Trigger: CCTGGGGGCCCGCGGGCTGGTGCACCGAGACCTCGCTACGCGCAACCTACTGCTGGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS GCA 72 bp GACGCCAGCAGTAGGTTGCGCGTAGCGAGGTCTCGGTaGACCAGCCCGCGGGCCCCCAGGTACGCCATGGCT +
Preference number: 6 (lower is better)
Translates to: DASSRLRVARSR*TSPRAPRYAMA
Trigger: AGCCATGGCGTACCTGGGGGCCCGCGGGCTGGTGCACCGAGACCTCGCTACGCGCAACCTACTGCTGGCGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CAA 72 bp GCCACCTTGATGGTGCGCGGCGACGCCAGCAGTAGGTaGCGCGTAGCGAGGTCTCGGTGCACCAGCCCGCGG +
Preference number: 6 (lower is better)
Translates to: ATLMVRGDASSR*RVARSRCTSPR
Trigger: CCGCGGGCTGGTGCACCGAGACCTCGCTACGCGCAACCTACTGCTGGCGTCGCCGCGCACCATCAAGGTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CAA 72 bp CCGCCCAGAGGCCGCACCAGCCCGAAGTCAGCCACCTaGATGGTGCGCGGCGACGCCAGCAGTAGGTTGCGC +
Preference number: 6 (lower is better)
Translates to: PPRGRTSPKSAT*MVRGDASSRLR
Trigger: GCGCAACCTACTGCTGGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCGGGCTGGTGCGGCCTCTGGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CAA 90 bp GGGCAGCTGGCCTGGATGAAGCGGGCTCCCTGGACACTCACACTCTaGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACCACACCGAAG +
Preference number: 6 (lower is better)
Translates to: GQLAWMKRAPWTLTL*PLGSVHSPRCTTPK
Trigger: CTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTGAGTGTCCAGGGAGCCCGCTTCATCCAGGCCAGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575268.1
ENST00000640398.1
CDS TCA 72 bp GGCTCTCTGGGGCACACCTGCCGAAGGAAGTGGAGCTaGAAGGGGCGGGACACGTGCTCCTTGGAGGCCCAC +
Preference number: 6 (lower is better)
Translates to: GSLGHTCRRKWS*KGRDTCSLEAH
Trigger: GTGGGCCTCCAAGGAGCACGTGTCCCGCCCCTTTCAGCTCCACTTCCTTCGGCAGGTGTGCCCCAGAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576136.1
ENST00000638332.1
CDS GCA 72 bp GGCCTCGGGGCAGGGGTCCCTCACCAGGCCGGCCCATaGCAATGCCGTCCAGGTCCTCAGGCTTTACAAAGT +
Preference number: 6 (lower is better)
Translates to: GLGAGVPHQAGP*QCRPGPQALQS
Trigger: ACTTTGTAAAGCCTGAGGACCTGGACGGCATTGGCATGGGCCGGCCTGGTGAGGGACCCCTGCCCCGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000574794.1
ENST00000575268.1
ENST00000639903.1
ENST00000640398.1
CDS GCA 72 bp CTATGCTTCCTGGGTGTTGATCTCCCCGGGCAGGGGTaGCTCTGTGGACTGGACGGGTGGCTGGCAAGCCCC +
Preference number: 6 (lower is better)
Translates to: LCFLGVDLPGQG*LCGLDGWLASP
Trigger: GGGGCTTGCCAGCCACCCGTCCAGTCCACAGAGGCACCCCTGCCCGGGGAGATCAACACCCAGGAAGCATAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 72 bp CAGAGGGGGCAGCTGGCCTGGATGAAGCGGGCTCCCTaGACACTCACACTCTTGCCACTGGGCAGCGTCCAC +
Preference number: 6 (lower is better)
Translates to: QRGQLAWMKRAP*TLTLLPLGSVH
Trigger: GTGGACGCTGCCCAGTGGCAAGAGTGTGAGTGTCCAGGGAGCCCGCTTCATCCAGGCCAGCTGCCCCCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575268.1
ENST00000640398.1
CDS CCA 72 bp CTGGTGTCTGTGCCCGCAGAAGCTGAGCTCAGGGCCTaGCCAGGACATAGCGGCTGGCAGCTGAGAGGTCCC +
Preference number: 6 (lower is better)
Translates to: LVSVPAEAELRA*PGHSGWQLRGP
Trigger: GGGACCTCTCAGCTGCCAGCCGCTATGTCCTGGCCAGGCCCTGAGCTCAGCTTCTGCGGGCACAGACACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CAA 72 bp GCCTGGATGAAGCGGGCTCCCTGGACACTCACACTCTaGCCACTGGGCAGCGTCCACAGCCCTCGGTGCACC +
Preference number: 6 (lower is better)
Translates to: AWMKRAPWTLTL*PLGSVHSPRCT
Trigger: GGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTGAGTGTCCAGGGAGCCCGCTTCATCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575268.1
ENST00000640398.1
CDS TCA 72 bp GGCCAGGGAAGCCTCTCCCTAGAGGGCTGGCTGGGCTaGGGAGAGCTAGAGGATAAAGGTGGGCGTGGAGGC +
Preference number: 6 (lower is better)
Translates to: GQGSLSLEGWLG*GELEDKGGRGG
Trigger: GCCTCCACGCCCACCTTTATCCTCTAGCTCTCCTCAGCCCAGCCAGCCCTCTAGGGAGAGGCTTCCCTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS GCA 72 bp TCTCCAGCTCCACCTGGTCAAGGCGGAAGCGGCGACTaGGGAACCTCCCAGGCTGCCTGGGCTAAATCCGAG +
Preference number: 6 (lower is better)
Translates to: SPAPPGQGGSGD*GTSQAAWAKSE
Trigger: CTCGGATTTAGCCCAGGCAGCCTGGGAGGTTCCGCAGTCGCCGCTTCCGCCTTGACCAGGTGGAGCTGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000570896.5
ENST00000575268.1
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
ENST00000640398.1
CDS CCA 72 bp CCCAGTGGCGCCAGCTCCATCACCATCTGCAGAGGCTaGCCCAGTACAAGGCCGTGCAGACGCAGCACGTGT +
Preference number: 6 (lower is better)
Translates to: PSGASSITICRG*PSTRPCRRSTC
Trigger: ACACGTGCTGCGTCTGCACGGCCTTGTACTGGGCCAGCCTCTGCAGATGGTGATGGAGCTGGCGCCACTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 72 bp CGAGGCAGACGAGAAGGCTCCGTGGCGCAGGCTCTCTaGGGCACACCTGCCGAAGGAAGTGGAGCTGAAAGG +
Preference number: 6 (lower is better)
Translates to: RGRREGSVAQAL*GTPAEGSGAER
Trigger: CCTTTCAGCTCCACTTCCTTCGGCAGGTGTGCCCCAGAGAGCCTGCGCCACGGAGCCTTCTCGTCTGCCTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576136.1
ENST00000638332.1
CDS GCA 72 bp CCATGTGGCCAGGCCCTCAGGGGCCTAGGCTTTTCATaGTGGTGTCTGTGCCCGCAGAAGCTGAGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: PCGQALRGLGFS*WCLCPQKLSSG
Trigger: CCCTGAGCTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCCCCTGAGGGCCTGGCCACATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 72 bp TGTGGCCAGGCCCTCAGGGGCCTAGGCTTTTCATGCTaGTGTCTGTGCCCGCAGAAGCTGAGCTCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: CGQALRGLGFSC*CLCPQKLSSGP
Trigger: AGGCCCTGAGCTCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGCCCCTGAGGGCCTGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 72 bp GAACGTAGCCTTTTCAGAGCTTCGGACAGTCTGCGCTaGGCTGTGGGAGGCCAGAATCAGGGCAGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: ERSLFRASDSLR*AVGGQNQGRPA
Trigger: GGCCGGCCTGCCCTGATTCTGGCCTCCCACAGCCCAGCGCAGACTGTCCGAAGCTCTGAAAAGGCTACGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS GCA 72 bp GCCCAGAACGTAGCCTTTTCAGAGCTTCGGACAGTCTaGGCTGGGCTGTGGGAGGCCAGAATCAGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: AQNVAFSELRTV*AGLWEARIRAG
Trigger: GCCTGCCCTGATTCTGGCCTCCCACAGCCCAGCGCAGACTGTCCGAAGCTCTGAAAAGGCTACGTTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576207.2
ENST00000640785.1
CDS CCA 72 bp GCTGGGAAGCTGCCCACTTTGAAGGTGCGACCATTCTaGCCCTTCCAGATTGTGGAGTCGGGGCTGCCCTCG +
Preference number: 6 (lower is better)
Translates to: AGKLPTLKVRPF*PFQIVESGLPS
Trigger: CGAGGGCAGCCCCGACTCCACAATCTGGAAGGGCCAGAATGGTCGCACCTTCAAAGTGGGCAGCTTCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS TCA 72 bp GGTCACCAGTCTCCATCCTCAGGGCGCCTGGTTCTGTaGCATCCCTCACACAACATGCTTCCGAAGGCCCGG +
Preference number: 6 (lower is better)
Translates to: GHQSPSSGRLVL*HPSHNMLPKAR
Trigger: CCGGGCCTTCGGAAGCATGTTGTGTGAGGGATGTCACAGAACCAGGCGCCCTGAGGATGGAGACTGGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000570896.5
ENST00000576136.1
ENST00000576812.5
ENST00000638332.1
ENST00000639010.1
ENST00000639430.1
CDS GCA 72 bp TGGCAGCTGAGAGGTCCCACTGGTAATGCTCCAGGATaGGCCAGCAGTCAGCTCTGGACCGGCTACTCAGGT +
Preference number: 6 (lower is better)
Translates to: WQLRGPTGNAPG*ASSQLWTGYSG
Trigger: ACCTGAGTAGCCGGTCCAGAGCTGACTGCTGGCGCATCCTGGAGCATTACCAGTGGGACCTCTCAGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 72 bp GAAACCACATCTCCCCCAGTGGCTCCTAGTGCTGTCTaGCACTCCTGGTGGGTGACCCCATGCACACTCAGC +
Preference number: 6 (lower is better)
Translates to: ETTSPPVAPSAV*HSWWVTPCTLS
Trigger: GCTGAGTGTGCATGGGGTCACCCACCAGGAGTGCCAGACAGCACTAGGAGCCACTGGGGGAGATGTGGTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS GCA 72 bp CCCAGTACAAGGCCGTGCAGACGCAGCACGTGTGGGTaGTCCAAGTTCATCATGACCGATACCTCTCGCAGG +
Preference number: 6 (lower is better)
Translates to: PSTRPCRRSTCG*SKFIMTDTSRR
Trigger: CCTGCGAGAGGTATCGGTCATGATGAACTTGGAGCACCCACACGTGCTGCGTCTGCACGGCCTTGTACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS GCA 72 bp ATCACCATCTGCAGAGGCTGGCCCAGTACAAGGCCGTaGAGACGCAGCACGTGTGGGTGCTCCAAGTTCATC +
Preference number: 6 (lower is better)
Translates to: ITICRGWPSTRP*RRSTCGCSKFI
Trigger: GATGAACTTGGAGCACCCACACGTGCTGCGTCTGCACGGCCTTGTACTGGGCCAGCCTCTGCAGATGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 72 bp CTGGCCCAGTACAAGGCCGTGCAGACGCAGCACGTGTaGGTGCTCCAAGTTCATCATGACCGATACCTCTCG +
Preference number: 6 (lower is better)
Translates to: LAQYKAVQTQHV*VLQVHHDRYLS
Trigger: CGAGAGGTATCGGTCATGATGAACTTGGAGCACCCACACGTGCTGCGTCTGCACGGCCTTGTACTGGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS TCA 72 bp GCCTTCTTTCTGTCTCCATCTATGCTTCCTGGGTGTTaGTCTCCCCGGGCAGGGGTGCCTCTGTGGACTGGA +
Preference number: 6 (lower is better)
Translates to: AFFLSPSMLPGC*SPRAGVPLWTG
Trigger: TCCAGTCCACAGAGGCACCCCTGCCCGGGGAGATCAACACCCAGGAAGCATAGATGGAGACAGAAAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS GCA 72 bp CCTAGTGCTGTCTGGCACTCCTGGTGGGTGACCCCATaGACACTCAGCTCCACCTCCATAATCTTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: PSAVWHSWWVTP*TLSSTSIIFLC
Trigger: GCAGAGGAAGATTATGGAGGTGGAGCTGAGTGTGCATGGGGTCACCCACCAGGAGTGCCAGACAGCACTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 72 bp GGGAGGCCAGAATCAGGGCTGGAGTGGAGGTGGGTGTaGGGAAGAGTGCGGAGAGACTTACAGGGAAGAAAA +
Preference number: 6 (lower is better)
Translates to: GRPESGLEWRWV*GRVRRDLQGRK
Trigger: TTTTCTTCCCTGTAAGTCTCTCCGCACTCTTCCCCACACCCACCTCCACTCCAGCCCTGATTCTGGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574794.1
ENST00000575268.1
ENST00000639903.1
ENST00000640398.1
CDS CAA 90 bp CCACGGAGCACCCCCGAGTGCACCCATCTTTCACAAAAGTCCTCTTaGCCTAGGAGGATAACCCTTCTGGTCCAAGCCTCCCTCAGAAGC +
Preference number: 6 (lower is better)
Translates to: PRSTPECTHLSQKSS*PRRITLLVQASLRS
Trigger: GCTTCTGAGGGAGGCTTGGACCAGAAGGGTTATCCTCCTAGGCAAAGAGGACTTTTGTGAAAGATGGGTGCACTCGGGGGTGCTCCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576136.1
ENST00000638332.1
CDS CCA 72 bp TGTGATGGGGTCACCAGTCTCCATCCTCAGGGCGCCTaGTTCTGTGACATCCCTCACACAACATGCTTCCGA +
Preference number: 6 (lower is better)
Translates to: CDGVTSLHPQGA*FCDIPHTTCFR
Trigger: TCGGAAGCATGTTGTGTGAGGGATGTCACAGAACCAGGCGCCCTGAGGATGGAGACTGGTGACCCCATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000570896.5
ENST00000576136.1
ENST00000576812.5
ENST00000638332.1
ENST00000639010.1
ENST00000639430.1
CDS CCA 72 bp ACTGGTAATGCTCCAGGATGCGCCAGCAGTCAGCTCTaGACCGGCTACTCAGGTGGAAGAGCTGATCTACCT +
Preference number: 6 (lower is better)
Translates to: TGNAPGCASSQL*TGYSGGRADLP
Trigger: AGGTAGATCAGCTCTTCCACCTGAGTAGCCGGTCCAGAGCTGACTGCTGGCGCATCCTGGAGCATTACCAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CAA 72 bp TCCTCTGGCCCCGTGCTGGGGGCGCATCCCAAAGATTaGCCTTCTTTCTGTCTCCATCTATGCTTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: SSGPVLGAHPKD*PSFCLHLCFLG
Trigger: ACCCAGGAAGCATAGATGGAGACAGAAAGAAGGCAAATCTTTGGGATGCGCCCCCAGCACGGGGCCAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000570896.5
ENST00000576716.1
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
ENST00000639433.1
CDS GCA 72 bp CCATGCACACTCAGCTCCACCTCCATAATCTTCCTCTaGAACTCAGGATCGGACAAGAGGCCTCCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: PCTLSSTSIIFL*NSGSDKRPPER
Trigger: CCTCTCTGGAGGCCTCTTGTCCGATCCTGAGTTGCAGAGGAAGATTATGGAGGTGGAGCTGAGTGTGCATGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570896.5
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
CDS CCA 72 bp CCAGGGCAGAGAGATGTTGATGCTGGTACGGAGAGTTaGCCCTGGCCTAGACAGAGTCTACAGTTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: PGQRDVDAGTES*PWPRQSLQLKL
Trigger: CAGCTTCAACTGTAGACTCTGTCTAGGCCAGGGCCAACTCTCCGTACCAGCATCAACATCTCTCTGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570896.5
ENST00000639010.1
CDS CCA 72 bp GTCCAGGTCCTCAGGCTTTACAAAGTCGAAGTGCTCTaGCCGAGTGACATTAAGCTCCTCAAGGATGGGCCA +
Preference number: 6 (lower is better)
Translates to: VQVLRLYKVEVL*PSDIKLLKDGP
Trigger: TGGCCCATCCTTGAGGAGCTTAATGTCACTCGGCCAGAGCACTTCGACTTTGTAAAGCCTGAGGACCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000570896.5
ENST00000574794.1
ENST00000575268.1
ENST00000576207.2
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
ENST00000639903.1
ENST00000640398.1
ENST00000640785.1
CDS CAA 72 bp ACCCCCGAGTGCACCCATCTTTCACAAAAGTCCTCTTaGCCTAGGAGGATAACCCTTCTGGTCCAAGCCTCC +
Preference number: 6 (lower is better)
Translates to: TPECTHLSQKSS*PRRITLLVQAS
Trigger: GGAGGCTTGGACCAGAAGGGTTATCCTCCTAGGCAAAGAGGACTTTTGTGAAAGATGGGTGCACTCGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576136.1
ENST00000638332.1
CDS GCA 72 bp ATGCCGTCCAGGTCCTCAGGCTTTACAAAGTCGAAGTaGTCTGGCCGAGTGACATTAAGCTCCTCAAGGATG +
Preference number: 6 (lower is better)
Translates to: MPSRSSGFTKSK*SGRVTLSSSRM
Trigger: CATCCTTGAGGAGCTTAATGTCACTCGGCCAGAGCACTTCGACTTTGTAAAGCCTGAGGACCTGGACGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000570896.5
ENST00000574794.1
ENST00000575268.1
ENST00000576207.2
ENST00000576812.5
ENST00000639010.1
ENST00000639430.1
ENST00000639903.1
ENST00000640398.1
ENST00000640785.1