Pregenerated sensors for TNIP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000168884Ensembl transcript IDs: ENST00000315423.12, ENST00000502256.1, ENST00000503235.1, ENST00000505186.1, ENST00000510267.5, ENST00000511352.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCGCGGAGGCGAGCGATGAGGGCGTCGCGGGCAGCGAGCTGGTCCTaGAGGCGGCGCAGCCGCTGTCCGGCCTCGTGGTACAGGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: ARRRAMRASRAASWS*RRRSRCPASWYRVQ Trigger: CTGCACCCTGTACCACGAGGCCGGACAGCGGCTGCGCCGCCTGCAGGACCAGCTCGCTGCCCGCGACGCCCTCATCGCTCGCCTCCGCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315423.12 ENST00000503235.1 ENST00000510267.5 |
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| CDS CCA 90 bp | CCCAGCCTGTCCCATGATTTCGGCCACCACCGGCCAGCAGACATCTaGTCAGTGCCGTCCGGAGCCCGAGGGACAGACACCTGCTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: PSLSHDFGHHRPADI*SVPSGARGTDTCCS Trigger: GGAACAGCAGGTGTCTGTCCCTCGGGCTCCGGACGGCACTGACCAGATGTCTGCTGGCCGGTGGTGGCCGAAATCATGGGACAGGCTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502256.1 |
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| CDS TCA 90 bp | CACTGCCCACTCAGTGCCACCAAGCCTTCAGCCCAGCCTGTCCCATaGTTTCGGCCACCACCGGCCAGCAGACATCTGGTCAGTGCCGTC | + |
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Preference number: 5 (lower is better) Translates to: HCPLSATKPSAQPVP*FRPPPASRHLVSAV Trigger: GACGGCACTGACCAGATGTCTGCTGGCCGGTGGTGGCCGAAATCATGGGACAGGCTGGGCTGAAGGCTTGGTGGCACTGAGTGGGCAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502256.1 |
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| CDS GCA 90 bp | TGTCCCATGATTTCGGCCACCACCGGCCAGCAGACATCTGGTCAGTaGCGTCCGGAGCCCGAGGGACAGACACCTGCTGTTCCAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: CPMISATTGQQTSGQ*RPEPEGQTPAVPAS Trigger: AGATGCTGGAACAGCAGGTGTCTGTCCCTCGGGCTCCGGACGGCACTGACCAGATGTCTGCTGGCCGGTGGTGGCCGAAATCATGGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502256.1 |
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| CDS GCA 90 bp | GCCTGTAGGCGATGCTCCCAGCACACAGAGGTCTTCCCCACACTCTaGTTACACTGTGGCCTACCTGGTCAGGACTTCTCTCCCCCACAT | + |
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Preference number: 5 (lower is better) Translates to: ACRRCSQHTEVFPTL*LHCGLPGQDFSPPH Trigger: ATGTGGGGGAGAGAAGTCCTGACCAGGTAGGCCACAGTGTAAGCAGAGTGTGGGGAAGACCTCTGTGTGCTGGGAGCATCGCCTACAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511352.1 |
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| CDS GCA 72 bp | TCCGGCCTCGTGGTACAGGGTGCAGAGCGCGGCAGCTaGGCGCGGGGCCTCCTCCCAGCCGCCCGACCCCGG | + |
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Preference number: 6 (lower is better) Translates to: SGLVVQGAERGS*ARGLLPAARPR Trigger: CCGGGGTCGGGCGGCTGGGAGGAGGCCCCGCGCGCAGCTGCCGCGCTCTGCACCCTGTACCACGAGGCCGGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000315423.12 ENST00000503235.1 ENST00000510267.5 |
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| CDS GCA 72 bp | CGAGCGATGAGGGCGTCGCGGGCAGCGAGCTGGTCCTaGAGGCGGCGCAGCCGCTGTCCGGCCTCGTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: RAMRASRAASWS*RRRSRCPASWY Trigger: GTACCACGAGGCCGGACAGCGGCTGCGCCGCCTGCAGGACCAGCTCGCTGCCCGCGACGCCCTCATCGCTCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315423.12 ENST00000503235.1 ENST00000510267.5 |
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| CDS CCA 72 bp | CGGCCGCCACACGCACTCTCGCTCCCGCAGCTCCTCTaGTACCCGCCCTCGTACCTGGCGCATCTGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RPPHALSLPQLL*YPPSYLAHLGL Trigger: GAGGCCCAGATGCGCCAGGTACGAGGGCGGGTACCAGAGGAGCTGCGGGAGCGAGAGTGCGTGTGGCGGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510267.5 |
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| CDS CCA 72 bp | TCCCATGATTTCGGCCACCACCGGCCAGCAGACATCTaGTCAGTGCCGTCCGGAGCCCGAGGGACAGACACC | + |
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Preference number: 6 (lower is better) Translates to: SHDFGHHRPADI*SVPSGARGTDT Trigger: GGTGTCTGTCCCTCGGGCTCCGGACGGCACTGACCAGATGTCTGCTGGCCGGTGGTGGCCGAAATCATGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502256.1 |
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| CDS GCA 72 bp | ATTTCGGCCACCACCGGCCAGCAGACATCTGGTCAGTaGCGTCCGGAGCCCGAGGGACAGACACCTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: ISATTGQQTSGQ*RPEPEGQTPAV Trigger: AACAGCAGGTGTCTGTCCCTCGGGCTCCGGACGGCACTGACCAGATGTCTGCTGGCCGGTGGTGGCCGAAAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502256.1 |
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| CDS TCA 72 bp | CTCAGTGCCACCAAGCCTTCAGCCCAGCCTGTCCCATaGTTTCGGCCACCACCGGCCAGCAGACATCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LSATKPSAQPVP*FRPPPASRHLV Trigger: GACCAGATGTCTGCTGGCCGGTGGTGGCCGAAATCATGGGACAGGCTGGGCTGAAGGCTTGGTGGCACTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502256.1 |
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| CDS GCA 72 bp | CGATGCTCCCAGCACACAGAGGTCTTCCCCACACTCTaGTTACACTGTGGCCTACCTGGTCAGGACTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RCSQHTEVFPTL*LHCGLPGQDFS Trigger: AGAGAAGTCCTGACCAGGTAGGCCACAGTGTAAGCAGAGTGTGGGGAAGACCTCTGTGTGCTGGGAGCATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511352.1 |
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| CDS TCA 72 bp | CACTGTCCTGTCTGCAGACAATCGGGTTCAACCAGGTaGTTCTGGACACAGGAATCTAACCTCTGCCCCACG | + |
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Preference number: 6 (lower is better) Translates to: HCPVCRQSGSTR*FWTQESNLCPT Trigger: CGTGGGGCAGAGGTTAGATTCCTGTGTCCAGAATCACCTGGTTGAACCCGATTGTCTGCAGACAGGACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505186.1 |
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| CDS TCA 72 bp | AGAAACCCTTGGATGAGTGAGCTTTGCCCCGTCAGCTaGCTCTCGTTACTGAGAACAGAAGTGGGTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RNPWMSELCPVS*LSLLRTEVGSG Trigger: CCCAGAACCCACTTCTGTTCTCAGTAACGAGAGTCAGCTGACGGGGCAAAGCTCACTCATCCAAGGGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511352.1 |
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