Pregenerated sensors for TNFSF9 (Homo sapiens)
Ensembl gene IDs: ENSG00000125657Ensembl transcript IDs: ENST00000245817.5
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TATAAATTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGCGGACTCTGTCCAGGTaGGCTGCACCCAGGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: YKLYWHVNNLGNIAIPSPRTLSR*AAPRLD Trigger: GTCCAGCCTGGGTGCAGCCCACCTGGACAGAGTCCG...CGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAATTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| 3UTR-3UTR CCA 90 bp | TATAAATTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGCTCGAGAGGCTGAGATaGGAGGATCACCTGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: YKLYWHVNNLGNIAIPSPLERLR*EDHLSL Trigger: GAGGCTCAGGTGATCCTCCCATCTCAGCCTCTCGAG...CGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAATTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| 3UTR-3UTR CCA 90 bp | TATAAATTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGGCCTGGGCACAATGCTaGCACATTACAGATGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: YKLYWHVNNLGNIAIPSPAWAQC*HITDAQ Trigger: TTGAGCATCTGTAATGTGCCAGCATTGTGCCCAGGC...CGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAATTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| 3UTR CCA 72 bp | CAGCAGGGACCCAGCACCAGGGGTCTCCATGAAGGATaGAGTAGGATTCGGACTCTGTCCAGGTGGGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: QQGPSTRGLHEG*SRIRTLSRWAA Trigger: TGCAGCCCACCTGGACAGAGTCCGAATCCTACTCCATCCTTCATGGAGACCCCTGGTGCTGGGTCCCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| 3UTR-3UTR CAA 90 bp | CTGAGCCTCGGGAGGTCGAGGCTGGAGGCTGCATTGACTCATGATTGCACCGCTATATCAAGGTCCAACTaGGGGAAGGAGTGGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: LSLGRSRLEAALTHDCTAISRSN*GKEWVR Trigger: CCTCACCCACTCCTTCCCCAAGTTGGACCTTGATAT...AGCGGTGCAATCATGAGTCAATGCAGCCTCCAGCCTCGACCTCCCGAGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| 3UTR TCA 72 bp | CCTCGGGAGGTCGAGGCTGGAGGCTGCATTGACTCATaGTTGCACCGCTGCATTCTAGCCTGGTTGACAGAA | + |
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Preference number: 3 (lower is better) Translates to: PREVEAGGCIDS*LHRCILAWLTE Trigger: TTCTGTCAACCAGGCTAGAATGCAGCGGTGCAATCATGAGTCAATGCAGCCTCCAGCCTCGACCTCCCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| 3UTR-3UTR CAA 90 bp | TATAAATTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGTGCATTCTAGCCTGGTaGACAGAACAAGACCATCTC | + |
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Preference number: 3 (lower is better) Translates to: YKLYWHVNNLGNIAIPSPCILAW*TEQDHL Trigger: GAGATGGTCTTGTTCTGTCAACCAGGCTAGAATGCA...CGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAATTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | GGAGTGGGTGAGGAGGGTCCTCAAGGGGAGGTCAGCAGCAGGGACCCCTGCCAATGGACGCCCAGGCGCTaGCCGGCACTCAGGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GVGEEGPQGEVSSRDPCQWTPRR*PALRCS Trigger: GCTGCACCTGAGTGCCGGCCAGCGCCTGGGCGTCCA...TTGGCAGGGGTCCCTGCTGCTGACCTCCCCTTGAGGACCCTCCTCACCCACTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR GCA 90 bp | GGAGTGGGTGAGGAGGGTCCTCAAGGGGAGGTCAGCAGCAGGGACCCCTGCCAACGCAGTGGCTGCAGGTaGAGCGCAAGTGAAACGGAG | + |
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Preference number: 4 (lower is better) Translates to: GVGEEGPQGEVSSRDPCQRSGCR*SASETE Trigger: CTCCGTTTCACTTGCGCTGCACCTGCAGCCACTGCG...TTGGCAGGGGTCCCTGCTGCTGACCTCCCCTTGAGGACCCTCCTCACCCACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | GTGGGTGAGGAGGGTCCTCAAGGGGAGGTCAGCAGCAGGGACCCCTGCCAAGCCCTCGAGAGGCTGAGATaGGAGGATCACCTGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VGEEGPQGEVSSRDPCQALERLR*EDHLSL Trigger: GAGGCTCAGGTGATCCTCCCATCTCAGCCTCTCGAG...GGCTTGGCAGGGGTCCCTGCTGCTGACCTCCCCTTGAGGACCCTCCTCACCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR TCA 90 bp | AGGGGTCTCCATGAAGGATGGAGTAGGATTCGGACTCTGTCCAGGTGGGCTGCAGCCCTGGCCTCAGTGTaGAGATGGACGCCCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RGLHEGWSRIRTLSRWAAALASV*RWTPRR Trigger: GCGCCTGGGCGTCCATCTTCACACTGAGGCCAGGGC...TGCAGCCCACCTGGACAGAGTCCGAATCCTACTCCATCCTTCATGGAGACCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | CTGAGCCTCGGGAGGTCGAGGCTGGAGGCTGCATTGACTCATGATTGCACCGCTCACGCCTGCCAGGCCTaGGTCACTGTACCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LSLGRSRLEAALTHDCTAHACQA*VTVPAQ Trigger: CTGAGCTGGTACAGTGACCCAGGCCTGGCAGGCGTG...AGCGGTGCAATCATGAGTCAATGCAGCCTCCAGCCTCGACCTCCCGAGGCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | AAGCAGCAGGGACCCAGCACCAGGGGTCTCCATGAAGGATGGAGTAGGATTCGGCTCGGAGGAGGCGGGTaGCAGGTCCACGGTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: KQQGPSTRGLHEGWSRIRLGGGG*QVHGQS Trigger: GCTTTGACCGTGGACCTGCCACCCGCCTCCTCCGAG...CCGAATCCTACTCCATCCTTCATGGAGACCCCTGGTGCTGGGTCCCTGCTGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | GGGAGGTCAGCAGCAGGGACCCCTGCCAAGCCCCTTGAGGTAGAGAAAGCAGCATGCAGCAAGCGGCCCTaGAAACCGAAGGCCGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: GRSAAGTPAKPLEVEKAACSKRP*KPKAEF Trigger: GAACTCGGCCTTCGGTTTCCAGGGCCGCTTGCTGCA...TGCTGCTTTCTCTACCTCAAGGGGCTTGGCAGGGGTCCCTGCTGCTGACCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | AAGCAGCAGGGACCCAGCACCAGGGGTCTCCATGAAGGATGGAGTAGGATTCGGAGCAGCAGAGCGCAGTaGCTGCAGGTGCAGCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: KQQGPSTRGLHEGWSRIRSSRAQ*LQVQRK Trigger: CTTGCGCTGCACCTGCAGCCACTGCGCTCTGCTGCT...CCGAATCCTACTCCATCCTTCATGGAGACCCCTGGTGCTGGGTCCCTGCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | AGGGGTCTCCATGAAGGATGGAGTAGGATTCGGACTCTGTCCAGGTGGGCTGCAGTAAGCTGCCAGGCATaGCGTGCCCTGGCCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RGLHEGWSRIRTLSRWAAVSCQA*RALASV Trigger: CACTGAGGCCAGGGCACGCCATGCCTGGCAGCTTAC...TGCAGCCCACCTGGACAGAGTCCGAATCCTACTCCATCCTTCATGGAGACCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | GGGAGGTCAGCAGCAGGGACCCCTGCCAAGCCCCTTGAGGTAGAGAAAGCAGCAATCAGCAGAACATTTTaGGCCACCAGCTGCGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: GRSAAGTPAKPLEVEKAAISRTF*ATSCAN Trigger: GTTTGCGCAGCTGGTGGCCCAAAATGTTCTGCTGAT...TGCTGCTTTCTCTACCTCAAGGGGCTTGGCAGGGGTCCCTGCTGCTGACCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | CTGAGCCTCGGGAGGTCGAGGCTGGAGGCTGCATTGACTCATGATTGCACCGCTAAAGTTAGCCAAGTGTaGTGGCACACAACTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LSLGRSRLEAALTHDCTAKVSQV*WHTTVV Trigger: GACCACAGTTGTGTGCCACCACACTTGGCTAACTTT...AGCGGTGCAATCATGAGTCAATGCAGCCTCCAGCCTCGACCTCCCGAGGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR GCA 90 bp | TTCTTTCAGTCTATTTCTAGATGTTTCTATAGCCCCCTAGCCTGGGCACAATGCGCGCCCTGGGTAAGCTaGCAGGCATGGCGTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: FFQSISRCFYSPLAWAQCAPWVS*QAWRAL Trigger: CAGGGCACGCCATGCCTGGCAGCTTACCCAGGGCGC...GCATTGTGCCCAGGCTAGGGGGCTATAGAAACATCTAGAAATAGACTGAAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR GCA 90 bp | CCAGCACCAGGGGTCTCCATGAAGGATGGAGTAGGATTCGGACTCTGTCCAGGTCTAGCCTGGGCACAATaGTGGCACATTACAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: PAPGVSMKDGVGFGLCPGLAWAQ*WHITDA Trigger: AGCATCTGTAATGTGCCAGCATTGTGCCCAGGCTAG...ACCTGGACAGAGTCCGAATCCTACTCCATCCTTCATGGAGACCCCTGGTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | AAGCAGCAGGGACCCAGCACCAGGGGTCTCCATGAAGGATGGAGTAGGATTCGGCGCTGCATTCTAGCCTaGTTGACAGAACAAGACCAT | + |
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Preference number: 4 (lower is better) Translates to: KQQGPSTRGLHEGWSRIRRCILA*LTEQDH Trigger: ATGGTCTTGTTCTGTCAACCAGGCTAGAATGCAGCG...CCGAATCCTACTCCATCCTTCATGGAGACCCCTGGTGCTGGGTCCCTGCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR TCA 90 bp | GTGGAGGCTGGGGATGAGTCTTTAAATTCCTCACGTATTACCATAACTCAGATTGATGGGAGGATCACCTaGGCCTCGGGAGGTCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VEAGDESLNSSRITITQIDGRIT*ASGGRG Trigger: GCCTCGACCTCCCGAGGCTCAGGTGATCCTCCCATC...AATCTGAGTTATGGTAATACGTGAGGAATTTAAAGACTCATCCCCAGCCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | AAGCAGCAGGGACCCAGCACCAGGGGTCTCCATGAAGGATGGAGTAGGATTCGGGCATGTAAACAACCTTaGCAACATAGCAATACCGTC | + |
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Preference number: 4 (lower is better) Translates to: KQQGPSTRGLHEGWSRIRACKQP*QHSNTV Trigger: GACGGTATTGCTATGTTGCCAAGGTTGTTTACATGC...CCGAATCCTACTCCATCCTTCATGGAGACCCCTGGTGCTGGGTCCCTGCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR GCA 90 bp | CTGAGCCTCGGGAGGTCGAGGCTGGAGGCTGCATTGACTCATGATTGCACCGCTCTGGCACATTACAGATaGTCAATACACACAAATAAG | + |
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Preference number: 4 (lower is better) Translates to: LSLGRSRLEAALTHDCTALAHYR*SIHTNK Trigger: CTTATTTGTGTGTATTGAGCATCTGTAATGTGCCAG...AGCGGTGCAATCATGAGTCAATGCAGCCTCCAGCCTCGACCTCCCGAGGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR TCA 90 bp | TTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGCAAAAAGGCTTCGGGGTCCAGTaGAGCGTCAGAGGCGTATTC | + |
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Preference number: 4 (lower is better) Translates to: LYWHVNNLGNIAIPSPQKGFGVQ*SVRGVF Trigger: GAATACGCCTCTGACGCTTCACTGGACCCCGAAGCC...TTTTTGCGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR GCA 90 bp | GTGGAGGCTGGGGATGAGTCTTTAAATTCCTCACGTATTACCATAACTCAGATTGCAGAGCGCAGTGGCTaGAGGTGCAGCGCAAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: VEAGDESLNSSRITITQIAERSG*RCSASE Trigger: TTCACTTGCGCTGCACCTGCAGCCACTGCGCTCTGC...AATCTGAGTTATGGTAATACGTGAGGAATTTAAAGACTCATCCCCAGCCTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR GCA 90 bp | TATAAATTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGCTGCCAGGCATGGCGTaGCCTGGCCTCAGTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: YKLYWHVNNLGNIAIPSPLPGMA*PGLSVK Trigger: CTTCACACTGAGGCCAGGGCACGCCATGCCTGGCAG...CGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAATTTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | TTCTTTCAGTCTATTTCTAGATGTTTCTATAGCCCCCTAGCCTGGGCACAATGCAGGCATGGCGTGCCCTaGCCTCAGTGTGAAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: FFQSISRCFYSPLAWAQCRHGVP*PQCEDG Trigger: TCCATCTTCACACTGAGGCCAGGGCACGCCATGCCT...GCATTGTGCCCAGGCTAGGGGGCTATAGAAACATCTAGAAATAGACTGAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | TTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGCAAAAAAAGACTGTGGCGCCCTaGGTAAGCTGCCAGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LYWHVNNLGNIAIPSPQKKTVAP*VSCQAW Trigger: CCATGCCTGGCAGCTTACCCAGGGCGCCACAGTCTT...TTTTTGCGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAA 50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | TATAAATTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGGGGCTGCACCCAGGCTaGACGTTATTCCGACCTCGG | + |
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Preference number: 4 (lower is better) Translates to: YKLYWHVNNLGNIAIPSPGLHPG*TLFRPR Trigger: CCGAGGTCGGAATAACGTCCAGCCTGGGTGCAGCCC...CGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAATTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR TCA 90 bp | TTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGCAAAAAGGCTGGAGGCTGCATTaGCTCATGATTGCACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LYWHVNNLGNIAIPSPQKGWRLH*LMIAPL Trigger: CAGCGGTGCAATCATGAGTCAATGCAGCCTCCAGCC...TTTTTGCGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR GCA 90 bp | TATAAATTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGCCAGCTGCGCAAACATaGCCTGCCGCAGGTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: YKLYWHVNNLGNIAIPSPPAAQT*PAAGPR Trigger: TCTTGGACCTGCGGCAGGGCATGTTTGCGCAGCTGG...CGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAATTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR GCA 90 bp | TATAAATTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGTTTTGGGCCACCAGCTaGGCAAACATGCCCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: YKLYWHVNNLGNIAIPSPFWATS*ANMPCR Trigger: GCGGCAGGGCATGTTTGCGCAGCTGGTGGCCCAAAA...CGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAATTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | TTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGCAAAAAAGTAGACTCCAGCCTTaGCCACCACCAGCTCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: LYWHVNNLGNIAIPSPQKSRLQP*PPPAPS Trigger: CGAAGGAGCTGGTGGTGGCCAAGGCTGGAGTCTACT...TTTTTGCGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR TCA 90 bp | TATAAATTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGTTATTCCGACCTCGGTaGAGGGAGTCCGGCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: YKLYWHVNNLGNIAIPSPLFRPR*RESGWD Trigger: ATCCCAGCCGGACTCCCTTCACCGAGGTCGGAATAA...CGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAATTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | TTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGCAAAAATATAGCCCCCTAGCCTaGGCACAATGCTGGCACATT | + |
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Preference number: 4 (lower is better) Translates to: LYWHVNNLGNIAIPSPQKYSPLA*AQCWHI Trigger: AATGTGCCAGCATTGTGCCCAGGCTAGGGGGCTATA...TTTTTGCGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | GTGGAGGCTGGGGATGAGTCTTTAAATTCCTCACGTATTACCATAACTCAGATTGGTCTCCATGAAGGATaGAGTAGGATTCGGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: VEAGDESLNSSRITITQIGLHEG*SRIRTL Trigger: CAGAGTCCGAATCCTACTCCATCCTTCATGGAGACC...AATCTGAGTTATGGTAATACGTGAGGAATTTAAAGACTCATCCCCAGCCTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CCA 90 bp | TTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGCAAAAAGCCTGGGCACAATGCTaGCACATTACAGATGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LYWHVNNLGNIAIPSPQKAWAQC*HITDAQ Trigger: TTGAGCATCTGTAATGTGCCAGCATTGTGCCCAGGC...TTTTTGCGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS CCA 90 bp | TGGACGCCCAGGCGCTGGCCGGCACTCAGGTGCAGCAAGCGGCCCTaGAAACCGAAGGCCGAGTTCCGAGCCTCGGAGGAGGCGGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: WTPRRWPALRCSKRP*KPKAEFRASEEAGG Trigger: GCCACCCGCCTCCTCCGAGGCTCGGAACTCGGCCTTCGGTTTCCAGGGCCGCTTGCTGCACCTGAGTGCCGGCCAGCGCCTGGGCGTCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS GCA 90 bp | ACGGTCAAAGCCAGGGCGGCGGCCCCAGCAGCAGAGCGCAGTGGCTaGAGGTGCAGCGCAAGTGAAACGGAGCCTGAGCCCTCGCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: TVKARAAAPAAERSG*RCSASETEPEPSPA Trigger: GGCCGGCGAGGGCTCAGGCTCCGTTTCACTTGCGCTGCACCTGCAGCCACTGCGCTCTGCTGCTGGGGCCGCCGCCCTGGCTTTGACCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS CCA 90 bp | GCCCTGGAAACCGAAGGCCGAGTTCCGAGCCTCGGAGGAGGCGGGTaGCAGGTCCACGGTCAAAGCCAGGGCGGCGGCCCCAGCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: ALETEGRVPSLGGGG*QVHGQSQGGGPSSR Trigger: TCTGCTGCTGGGGCCGCCGCCCTGGCTTTGACCGTGGACCTGCCACCCGCCTCCTCCGAGGCTCGGAACTCGGCCTTCGGTTTCCAGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS GCA 90 bp | GAGTCCCAAGACTGTGGCGCCCTGGGTAAGCTGCCAGGCATGGCGTaGCCTGGCCTCAGTGTGAAGATGGACGCCCAGGCGCTGGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: ESQDCGALGKLPGMA*PGLSVKMDAQALAG Trigger: GCCGGCCAGCGCCTGGGCGTCCATCTTCACACTGAGGCCAGGGCACGCCATGCCTGGCAGCTTACCCAGGGCGCCACAGTCTTGGGACTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS TCA 90 bp | TGTCCAGGTGGGCTGCACCCAGGCTGGACGTTATTCCGACCTCGGTaGAGGGAGTCCGGCTGGGATTTCGGGGGTCACCCGGAAGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: CPGGLHPGWTLFRPR*RESGWDFGGHPEES Trigger: GGACTCTTCCGGGTGACCCCCGAAATCCCAGCCGGACTCCCTTCACCGAGGTCGGAATAACGTCCAGCCTGGGTGCAGCCCACCTGGACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CAA 90 bp | GGGAGGTCAGCAGCAGGGACCCCTGCCAAGCCCCTTGAGGTAGAGAAAGCAGCATGCATTCTAGCCTGGTaGACAGAACAAGACCATCTC | + |
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Preference number: 5 (lower is better) Translates to: GRSAAGTPAKPLEVEKAACILAW*TEQDHL Trigger: GAGATGGTCTTGTTCTGTCAACCAGGCTAGAATGCA...TGCTGCTTTCTCTACCTCAAGGGGCTTGGCAGGGGTCCCTGCTGCTGACCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CAA 90 bp | TTCTTTCAGTCTATTTCTAGATGTTTCTATAGCCCCCTAGCCTGGGCACAATGCGATCAGCAGAACATTTaGGGCCACCAGCTGCGCAAA | + |
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Preference number: 5 (lower is better) Translates to: FFQSISRCFYSPLAWAQCDQQNI*GHQLRK Trigger: TTTGCGCAGCTGGTGGCCCAAAATGTTCTGCTGATC...GCATTGTGCCCAGGCTAGGGGGCTATAGAAACATCTAGAAATAGACTGAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS-3UTR CAA 90 bp | TATAAATTGTACTGGCATGTAAACAACCTTGGCAACATAGCAATACCGTCTCCGATATCAAGGTCCAACTaGGGGAAGGAGTGGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: YKLYWHVNNLGNIAIPSPISRSN*GKEWVR Trigger: CCTCACCCACTCCTTCCCCAAGTTGGACCTTGATAT...CGGAGACGGTATTGCTATGTTGCCAAGGTTGTTTACATGCCAGTACAATTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS CCA 72 bp | ACCGAAGGCCGAGTTCCGAGCCTCGGAGGAGGCGGGTaGCAGGTCCACGGTCAAAGCCAGGGCGGCGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TEGRVPSLGGGG*QVHGQSQGGGP Trigger: GGGGCCGCCGCCCTGGCTTTGACCGTGGACCTGCCACCCGCCTCCTCCGAGGCTCGGAACTCGGCCTTCGGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS CCA 72 bp | AGGCGCTGGCCGGCACTCAGGTGCAGCAAGCGGCCCTaGAAACCGAAGGCCGAGTTCCGAGCCTCGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RRWPALRCSKRP*KPKAEFRASEE Trigger: CTCCTCCGAGGCTCGGAACTCGGCCTTCGGTTTCCAGGGCCGCTTGCTGCACCTGAGTGCCGGCCAGCGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS TCA 72 bp | GTAAGCTGCCAGGCATGGCGTGCCCTGGCCTCAGTGTaGAGATGGACGCCCAGGCGCTGGCCGGCACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VSCQAWRALASV*RWTPRRWPALR Trigger: CCTGAGTGCCGGCCAGCGCCTGGGCGTCCATCTTCACACTGAGGCCAGGGCACGCCATGCCTGGCAGCTTAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS GCA 72 bp | GACTGTGGCGCCCTGGGTAAGCTGCCAGGCATGGCGTaGCCTGGCCTCAGTGTGAAGATGGACGCCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: DCGALGKLPGMA*PGLSVKMDAQA Trigger: CGCCTGGGCGTCCATCTTCACACTGAGGCCAGGGCACGCCATGCCTGGCAGCTTACCCAGGGCGCCACAGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS TCA 72 bp | GGGCTGCACCCAGGCTGGACGTTATTCCGACCTCGGTaGAGGGAGTCCGGCTGGGATTTCGGGGGTCACCCG | + |
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Preference number: 6 (lower is better) Translates to: GLHPGWTLFRPR*RESGWDFGGHP Trigger: CGGGTGACCCCCGAAATCCCAGCCGGACTCCCTTCACCGAGGTCGGAATAACGTCCAGCCTGGGTGCAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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| CDS GCA 72 bp | GGCCCATCGATCAGCAGAACATTTTGGGCCACCAGCTaGGCAAACATGCCCTGCCGCAGGTCCAAGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GPSISRTFWATS*ANMPCRRSKRP Trigger: CGGCCTCTTGGACCTGCGGCAGGGCATGTTTGCGCAGCTGGTGGCCCAAAATGTTCTGCTGATCGATGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245817.5 |
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