RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFSF15 (Homo sapiens)

Ensembl gene IDs: ENSG00000181634

Ensembl transcript IDs: ENST00000374044.1, ENST00000374045.5

Found 348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTAGAGGATATGAACCCACTGAAGCACAGAAGGGACCTCCGCAATaGCCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGC +
Preference number: 1 (lower is better)
Translates to: TRGYEPTEAQKGPPQ*PACPPGKVLARLIS
Trigger: GCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCGGAGGTCCCTTCTGTGCTTCAGTGGGTTCATATCCTCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 90 bp ATCACCTACAGAACAGTGGGCAGGTTTGAGCAGGCCACTCTTCTGTaGAAAACTCCTCCTGCATACCAAAGCTGCTTGGTGCTCTCACGC +
Preference number: 1 (lower is better)
Translates to: ITYRTVGRFEQATLL*KTPPAYQSCLVLSR
Trigger: GCGTGAGAGCACCAAGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAGAGTGGCCTGCTCAAACCTGCCCACTGTTCTGTAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR TCA 90 bp GTGTGTCTCAGAGCTGGGGAAGTTGTAAATGTGGTTGTTAGAGGGTaGCGGGGCATGGAGGTGATGGCTCTGATCCACATTCTCTCACCA +
Preference number: 1 (lower is better)
Translates to: VCLRAGEVVNVVVRG*RGMEVMALIHILSP
Trigger: TGGTGAGAGAATGTGGATCAGAGCCATCACCTCCATGCCCCGTCACCCTCTAACAACCACATTTACAACTTCCCCAGCTCTGAGACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 90 bp GAGCAGGCCACTCTTCTGTGCAAAACTCCTCCTGCATACCAAAGCTaGTTGGTGCTCTCACGCACCATGAAGACCGGTTCAGAAAGAACA +
Preference number: 1 (lower is better)
Translates to: EQATLLCKTPPAYQS*LVLSRTMKTGSERT
Trigger: TGTTCTTTCTGAACCGGTCTTCATGGTGCGTGAGAGCACCAAGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAGAGTGGCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 90 bp GTGTGTCTTGTTCCTCCTGAATGTATACACTGTGAGAGTAGGACTTaGCTGTCGCATTCCTTCTCAGCTCTCCAGTATCCAGGCAAGTGC +
Preference number: 1 (lower is better)
Translates to: VCLVPPECIHCESRT*LSHSFSALQYPGKC
Trigger: GCACTTGCCTGGATACTGGAGAGCTGAGAAGGAATGCGACAGGCAAGTCCTACTCTCACAGTGTATACATTCAGGAGGAACAAGACACAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 90 bp CTGCTACACTGGACACTTTGCTCAGGAGCCTCTCAAATGCCTCTCTaGCTCTATAGTCTACTGGAAACCAGAGTGAGAGTGATTTTGGTG +
Preference number: 1 (lower is better)
Translates to: LLHWTLCSGASQMPL*LYSLLETRVRVILV
Trigger: CACCAAAATCACTCTCACTCTGGTTTCCAGTAGACTATAGAGGCAGAGAGGCATTTGAGAGGCTCCTGAGCAAAGTGTCCAGTGTAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 90 bp TGCCTGTCGCATTCCTTCTCAGCTCTCCAGTATCCAGGCAAGTGCTaGCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAG +
Preference number: 1 (lower is better)
Translates to: CLSHSFSALQYPGKC*HVTDAQNKNDLRMK
Trigger: CTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTTGCCTGGATACTGGAGAGCTGAGAAGGAATGCGACAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 90 bp ACTTGCCTGTCGCATTCCTTCTCAGCTCTCCAGTATCCAGGCAAGTaGTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATG +
Preference number: 1 (lower is better)
Translates to: TCLSHSFSALQYPGK*CHVTDAQNKNDLRM
Trigger: CATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTTGCCTGGATACTGGAGAGCTGAGAAGGAATGCGACAGGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR TCA 90 bp AAACTCCTCCTGCATACCAAAGCTGCTTGGTGCTCTCACGCACCATaGAGACCGGTTCAGAAAGAACATTTTATGTTTTTAATGGGTGTT +
Preference number: 1 (lower is better)
Translates to: KLLLHTKAAWCSHAP*RPVQKEHFMFLMGV
Trigger: AACACCCATTAAAAACATAAAATGTTCTTTCTGAACCGGTCTTCATGGTGCGTGAGAGCACCAAGCAGCTTTGGTATGCAGGAGGAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR TCA 90 bp TGTGTTGGACACTCTCTGGACAAATGGGAAATGACAGCTAATTACTaGACCCTTGAGAAGGCCTGCCAGGTTTGTAATGATCAACTAGAA +
Preference number: 1 (lower is better)
Translates to: CVGHSLDKWEMTANY*TLEKACQVCNDQLE
Trigger: TTCTAGTTGATCATTACAAACCTGGCAGGCCTTCTCAAGGGTTCAGTAATTAGCTGTCATTTCCCATTTGTCCAGAGAGTGTCCAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 90 bp AACTCAATAAATATTAATGAAGTGCTCCTGCTACACTGGACACTTTaGTCAGGAGCCTCTCAAATGCCTCTCTGCCTCTATAGTCTACTG +
Preference number: 1 (lower is better)
Translates to: NSININEVLLLHWTL*SGASQMPLCLYSLL
Trigger: CAGTAGACTATAGAGGCAGAGAGGCATTTGAGAGGCTCCTGAGCAAAGTGTCCAGTGTAGCAGGAGCACTTCATTAATATTTATTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CCA 90 bp ATACGGGCCAAGGGTCACCAGTCATATAATACCGAAATGCTCAGATaGCACAGAATGCATGAAGTTAACATCTTTCATTCTCATGAGCTC +
Preference number: 1 (lower is better)
Translates to: IRAKGHQSYNTEMLR*HRMHEVNIFHSHEL
Trigger: GAGCTCATGAGAATGAAAGATGTTAACTTCATGCATTCTGTGCCATCTGAGCATTTCGGTATTATATGACTGGTGACCCTTGGCCCGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CCA 90 bp ACAGAATTGGGTAAGGGCTTGGGAAAATACCTTGCAAGAGAATGTTaGCAATGGCCGTGCCTTGTGCACAGTGAGTTAGTTAAACTTTTA +
Preference number: 1 (lower is better)
Translates to: TELGKGLGKYLAREC*QWPCLVHSELVKLL
Trigger: TAAAAGTTTAACTAACTCACTGTGCACAAGGCACGGCCATTGCCAACATTCTCTTGCAAGGTATTTTCCCAAGCCCTTACCCAATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR TCA 90 bp GCCACTGCGCCTGGCCAAGACTTGGAGTTATTCTTTAGAGTATGTTaGCTGATGTTTGATCAGGAAGTATCTAGTGGTGTTCATATAAAT +
Preference number: 1 (lower is better)
Translates to: ATAPGQDLELFFRVC*LMFDQEVSSGVHIN
Trigger: ATTTATATGAACACCACTAGATACTTCCTGATCAAACATCAGTCAACATACTCTAAAGAATAACTCCAAGTCTTGGCCAGGCGCAGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
3UTR TCA 90 bp CTGTTTTCTAGAGCTTTCCTTGGACTTCCTTCAAAGCTCCTGAATTaGAGCAAATTTATGATCAAATTGAACAATAACTGGACCACTGGT +
Preference number: 1 (lower is better)
Translates to: LFSRAFLGLPSKLLN*SKFMIKLNNNWTTG
Trigger: ACCAGTGGTCCAGTTATTGTTCAATTTGATCATAAATTTGCTTCAATTCAGGAGCTTTGAAGGAAGTCCAAGGAAAGCTCTAGAAAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
3UTR TCA 90 bp AGGTGTTTGAAAATACTTGTCCCATCTTCCTTCAAATCACTAAAATaGACTCTATTTGCGATGAGTAGAGAGGTTAGAAGAGTCCAGGAT +
Preference number: 1 (lower is better)
Translates to: RCLKILVPSSFKSLK*TLFAMSREVRRVQD
Trigger: ATCCTGGACTCTTCTAACCTCTCTACTCATCGCAAATAGAGTTCATTTTAGTGATTTGAAGGAAGATGGGACAAGTATTTTCAAACACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCGTTGTCCCTGTGGAATaGCCCCTACTCCCGGCCCCA +
Preference number: 2 (lower is better)
Translates to: EESRIMVQEDSFLALDQPVVPVE*PLLPAP
Trigger: TGGGGCCGGGAGTAGGGGGCATTCCACAGGGACAAC...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATAAACCGTTGTCCCTGTaGAATGCCCCCTACTCCCGG +
Preference number: 2 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANKPLSL*NAPYSR
Trigger: CCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTT...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGTTACCCAGGCTGGAGTaGAATGGCGCGATCTGGGCT +
Preference number: 2 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVLPRLE*NGAIWA
Trigger: AGCCCAGATCGCGCCATTGCACTCCAGCCTGGGTAA...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR TCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGAACAGTGGGCAGGTTTaGGCAGGCCACTCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVNSGQV*AGHSSV
Trigger: CACAGAAGAGTGGCCTGCTCAAACCTGCCCACTGTT...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR TCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCGAGGTTGCAGTGAACTaGGATCCTGCCACTGCACTT +
Preference number: 2 (lower is better)
Translates to: EESRIMVQEDSFLALDQPEVAVN*DPATAL
Trigger: AAGTGCAGTGGCAGGATCTCAGTTCACTGCAACCTC...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 90 bp CAGGCCACTCTTCTGTGCAAAACTCCTCCTGCATACCAAAGCTGCTaGGTGCTCTCACGCACCATGAAGACCGGTTCAGAAAGAACATTT +
Preference number: 2 (lower is better)
Translates to: QATLLCKTPPAYQSC*VLSRTMKTGSERTF
Trigger: AAATGTTCTTTCTGAACCGGTCTTCATGGTGCGTGAGAGCACCAAGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAGAGTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGAGTGAACTGAGATCCTaGCACTGCACTTCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVSELRS*HCTSAW
Trigger: CCAGGCTGAAGTGCAGTGGCAGGATCTCAGTTCACT...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 90 bp CATGAGCTCATTTGCTCCTTGGAAACAAATGGGCAGATTCCTGCTTaGCAGACAAGTCAACAAAGGCTAGGAGAACAGAGCTGCCTCTCC +
Preference number: 2 (lower is better)
Translates to: HELICSLETNGQIPA*QTSQQRLGEQSCLS
Trigger: GGAGAGGCAGCTCTGTTCTCCTAGCCTTTGTTGACTTGTCTGCAAAGCAGGAATCTGCCCATTTGTTTCCAAGGAGCAAATGAGCTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 90 bp CCTCTCTGCCTCTATAGTCTACTGGAAACCAGAGTGAGAGTGATTTaGGTGCCAAATTTCCTCTCAGACTCATCCATGAGGTCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: PLCLYSLLETRVRVI*VPNFLSDSSMRSPR
Trigger: CCTGGGAGACCTCATGGATGAGTCTGAGAGGAAATTTGGCACCAAAATCACTCTCACTCTGGTTTCCAGTAGACTATAGAGGCAGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATCGCCTGGCCAAGACTTaGAGTTATTCTTTAGAGTAT +
Preference number: 2 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANRLAKT*SYSLEY
Trigger: ATACTCTAAAGAATAACTCCAAGTCTTGGCCAGGCG...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp GGTTTGAGCAGGCCACTCTTCTGTGCAAAACTCCTCCTGCATACCAAAGCTGCTCTCCTTGGAAACAAATaGGCAGATTCCTGCTTTGCA +
Preference number: 2 (lower is better)
Translates to: GLSRPLFCAKLLLHTKAALLGNK*ADSCFA
Trigger: TGCAAAGCAGGAATCTGCCCATTTGTTTCCAAGGAG...AGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAGAGTGGCCTGCTCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCGCTCACCGCAACCTCTaGCTCCCCAGTTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVAHRNL*LPSSSN
Trigger: ATTGCTTGAACTGGGGAGGCAGAGGTTGCGGTGAGC...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCAAACCGTTGTCCCTGTaGAATGCCCCCTACTCCCGG +
Preference number: 2 (lower is better)
Translates to: RNSPILQPILIIYLLSSAKPLSL*NAPYSR
Trigger: CCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTT...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
3UTR-3UTR CCA 90 bp TCTCCTCCCACTTCCATGTTGTCCTACAGGTGTTTGAAAATACTTGTCCCATCTTCACCTACAGAACAGTaGGCAGGTTTGAGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: SPPTSMLSYRCLKILVPSSPTEQ*AGLSRP
Trigger: TGGCCTGCTCAAACCTGCCCACTGTTCTGTAGGTGA...AGATGGGACAAGTATTTTCAAACACCTGTAGGACAACATGGAAGTGGGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR TCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCGTCCTAGGAATTGGTTaGGGGAATATTCTCCTATCA +
Preference number: 2 (lower is better)
Translates to: EESRIMVQEDSFLALDQPVLGIG*GNILLS
Trigger: TGATAGGAGAATATTCCCTCAACCAATTCCTAGGAC...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR TCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGCTCCCCCAACCTCTGTaGAGAATAGCTTCTACAAAA +
Preference number: 2 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVLPQPL*RIASTK
Trigger: TTTTGTAGAAGCTATTCTTCACAGAGGTTGGGGGAG...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTGTTGTCCCTGTGGAATaGCCCCTACTCCCGGCCCCA +
Preference number: 2 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVVVPVE*PLLPAP
Trigger: TGGGGCCGGGAGTAGGGGGCATTCCACAGGGACAAC...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
3UTR-3UTR GCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGACCCTTGAGAAGGCCTaGCAGGTTTGTAATGATCAA +
Preference number: 2 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVTLEKA*QVCNDQ
Trigger: TTGATCATTACAAACCTGGCAGGCCTTCTCAAGGGT...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCGTGAGCCACTGCGCCTaGCCAAGACTTGGAGTTATT +
Preference number: 2 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVVSHCA*PRLGVI
Trigger: AATAACTCCAAGTCTTGGCCAGGCGCAGTGGCTCAC...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCAGCTCATTTGCTCCTTaGAAACAAATGGGCAGATTC +
Preference number: 2 (lower is better)
Translates to: EESRIMVQEDSFLALDQPSSFAP*KQMGRF
Trigger: GAATCTGCCCATTTGTTTCCAAGGAGCAAATGAGCT...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR TCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGAGGCAGAGGTTGCAGTaGACTGAGATCCTGCCACTG +
Preference number: 2 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKRQRLQ*TEILPL
Trigger: CAGTGGCAGGATCTCAGTTCACTGCAACCTCTGCCT...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTTTCAAGCAATTCTTCTaGCTCGGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVFKQFF*LGLLSS
Trigger: GCTACTCAGGAGGCCGAGGCAGAAGAATTGCTTGAA...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGTTCTCTCACCACTGGTaGAAAAGGATTCAAGGCTTA +
Preference number: 2 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVFSHHW*KRIQGL
Trigger: TAAGCCTTGAATCCTTTTGCACCAGTGGTGAGAGAA...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTCTTGCAAGAGAATGTTaGCAATGGCCGTGCCTTGTG +
Preference number: 2 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVLAREC*QWPCLV
Trigger: CACAAGGCACGGCCATTGCCAACATTCTCTTGCAAG...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGTGGAGCCAAGAGTTCTaGTGTGCTCTATTATTGATT +
Preference number: 2 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVWSQEF*CALLLI
Trigger: AATCAATAATAGAGCACACCAGAACTCTTGGCTCCA...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp TCTCCTCCCACTTCCATGTTGTCCTACAGGTGTTTGAAAATACTTGTCCCATCTAAATGGGCAGATTCCTaGTTTGCAGACAAGTCAACA +
Preference number: 2 (lower is better)
Translates to: SPPTSMLSYRCLKILVPSKWADS*FADKST
Trigger: TGTTGACTTGTCTGCAAAGCAGGAATCTGCCCATTT...AGATGGGACAAGTATTTTCAAACACCTGTAGGACAACATGGAAGTGGGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp TCTCCTCCCACTTCCATGTTGTCCTACAGGTGTTTGAAAATACTTGTCCCATCTCTCTGTAGGTCCAGCTaGCAATATGATGCAAAAATG +
Preference number: 2 (lower is better)
Translates to: SPPTSMLSYRCLKILVPSLCRSS*QYDAKM
Trigger: CATTTTTGCATCATATTGGCAGCTGGACCTACAGAG...AGATGGGACAAGTATTTTCAAACACCTGTAGGACAACATGGAAGTGGGAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGGGGCAACCTTGTAACTaGAACTCTGTAGCCCTAGCT +
Preference number: 2 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKGQPCN*NSVALA
Trigger: AGCTAGGGCTACAGAGTTGCAGTTACAAGGTTGCCC...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGTATTGTCCTAGGAATTaGTTGAGGGAATATTCTCCT +
Preference number: 2 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVYCPRN*LREYSP
Trigger: AGGAGAATATTCCCTCAACCAATTCCTAGGACAATA...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR TCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTCCTATTAGGAATGTCTaGCTGTGCCTTTCCGTAAAA +
Preference number: 2 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVPIRNV*LCLSVK
Trigger: TTTTACGGAAAGGCACAGTCAGACATTCCTAATAGG...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR TCA 90 bp TCTCCTCCCACTTCCATGTTGTCCTACAGGTGTTTGAAAATACTTGTCCCATCTCTGAATAGTTTAGGTTaGAATGGAGCCAAGAGTTCT +
Preference number: 2 (lower is better)
Translates to: SPPTSMLSYRCLKILVPSLNSLG*NGAKSS
Trigger: AGAACTCTTGGCTCCATTTCAACCTAAACTATTCAG...AGATGGGACAAGTATTTTCAAACACCTGTAGGACAACATGGAAGTGGGAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGCTACACTGGACACTTTaGTCAGGAGCCTCTCAAATG +
Preference number: 2 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKLHWTL*SGASQM
Trigger: CATTTGAGAGGCTCCTGAGCAAAGTGTCCAGTGTAG...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGGTGCAAAACTCCTCCTaGATACCAAAGCTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLVQNSS*IPKLLG
Trigger: ACCAAGCAGCTTTGGTATGCAGGAGGAGTTTTGCAC...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTTTTTCCCTTCCCCCATaGAATAAGTCCATTGTCTCT +
Preference number: 2 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVFSLPP*NKSIVS
Trigger: AGAGACAATGGACTTATTCCATGGGGGAAGGGAAAA...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp ATAATTATAGATTTGAAAAAGACCTCAGAGATCCTTTGGCTTAATCTCTCCCCCCCTAGCTCTCTTCTCTaGGGAGCTACAGTAGAAGTC +
Preference number: 2 (lower is better)
Translates to: IIIDLKKTSEILWLNLSPPSSLL*GATVEV
Trigger: GACTTCTACTGTAGCTCCCCAGAGAAGAGAGCTAGG...GGGGGAGAGATTAAGCCAAAGGATCTCTGAGGTCTTTTTCAAATCTATAATTAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 90 bp TGTCTTGCAGAATTAATCCCCAATGTCACAATCATGGAAACAGAATaGGGTAAGGGCTTGGGAAAATACCTTGCAAGAGAATGTTGGCAA +
Preference number: 2 (lower is better)
Translates to: CLAELIPNVTIMETE*GKGLGKYLARECWQ
Trigger: TTGCCAACATTCTCTTGCAAGGTATTTTCCCAAGCCCTTACCCAATTCTGTTTCCATGATTGTGACATTGGGGATTAATTCTGCAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 90 bp CATTTGATGAAGTTCAGCTACTTTATTTACTTGGCACTGTGTGTCTaGTTCCTCCTGAATGTATACACTGTGAGAGTAGGACTTGCCTGT +
Preference number: 2 (lower is better)
Translates to: HLMKFSYFIYLALCV*FLLNVYTVRVGLAC
Trigger: ACAGGCAAGTCCTACTCTCACAGTGTATACATTCAGGAGGAACAAGACACACAGTGCCAAGTAAATAAAGTAGCTGAACTTCATCAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR TCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTTGTCCTACAGGTGTTTaGAAATACTTGTCCCATCTT +
Preference number: 2 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVCPTGV*KYLSHL
Trigger: AAGATGGGACAAGTATTTTCAAACACCTGTAGGACA...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGACATTCTCTCACCACTaGTGCAAAAGGATTCAAGGC +
Preference number: 2 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLTFSHH*CKRIQG
Trigger: GCCTTGAATCCTTTTGCACCAGTGGTGAGAGAATGT...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGAGTAGAAAATTCCTTTaGGGATCAAGCCAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKSRKFL*GSSQRG
Trigger: CCCTCTCTGGCTTGATCCCCAAAGGAATTTTCTACT...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR TCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGCATCTTTCATTCTCATaGGCTCATTTGCTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKHLSFS*AHLLLG
Trigger: TCCAAGGAGCAAATGAGCTCATGAGAATGAAAGATG...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGCCACAGTCAGTAGAGTaGCAGAAATCTGATGTAACA +
Preference number: 2 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKPQSVE*QKSDVT
Trigger: TGTTACATCAGATTTCTGGCACTCTACTGACTGTGG...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR GCA 90 bp ATAATTATAGATTTGAAAAAGACCTCAGAGATCCTTTGGCTTAATCTCTCCCCCTTAATGAAGTGCTCCTaGTACACTGGACACTTTGCT +
Preference number: 2 (lower is better)
Translates to: IIIDLKKTSEILWLNLSPLMKCS*YTGHFA
Trigger: AGCAAAGTGTCCAGTGTAGCAGGAGCACTTCATTAA...GGGGGAGAGATTAAGCCAAAGGATCTCTGAGGTCTTTTTCAAATCTATAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CCA 90 bp ATAATTATAGATTTGAAAAAGACCTCAGAGATCCTTTGGCTTAATCTCTCCCCCAATTGGGTAAGGGCTTaGGAAAATACCTTGCAAGAG +
Preference number: 2 (lower is better)
Translates to: IIIDLKKTSEILWLNLSPNWVRA*ENTLQE
Trigger: CTCTTGCAAGGTATTTTCCCAAGCCCTTACCCAATT...GGGGGAGAGATTAAGCCAAAGGATCTCTGAGGTCTTTTTCAAATCTATAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR TCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGGCAAGAAAACTCTACTaGATACAAGCAACTGTTGTA +
Preference number: 2 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKARKLY*IQATVV
Trigger: TACAACAGTTGCTTGTATTCAGTAGAGTTTTCTTGC...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 90 bp ATATTTAGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTaGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGG +
Preference number: 2 (lower is better)
Translates to: IFRNSPILQPILIIY*LSSAFFQLVLSSVR
Trigger: CCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCTAAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
3UTR TCA 72 bp CTGGCACTGGCCACGAAGGGTGACAGGGTGTGGATGTaGTGGCTCCCTCTGAGCCTGGGTTTCTTCATCTTT +
Preference number: 3 (lower is better)
Translates to: LALATKGDRVWM*WLPLSLGFFIF
Trigger: AAAGATGAAGAAACCCAGGCTCAGAGGGAGCCATCACATCCACACCCTGTCACCCTTCGTGGCCAGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 72 bp CCGCAACCTCTGCCTCCCCAGTTCAAGCAATTCTTCTaGCTCGGCCTCCTGAGTAGCCAGGATTACAGCCAT +
Preference number: 3 (lower is better)
Translates to: PQPLPPQFKQFF*LGLLSSQDYSH
Trigger: ATGGCTGTAATCCTGGCTACTCAGGAGGCCGAGGCAGAAGAATTGCTTGAACTGGGGAGGCAGAGGTTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
3UTR GCA 72 bp AGAACAGTGGGCAGGTTTGAGCAGGCCACTCTTCTGTaGAAAACTCCTCCTGCATACCAAAGCTGCTTGGTG +
Preference number: 3 (lower is better)
Translates to: RTVGRFEQATLL*KTPPAYQSCLV
Trigger: CACCAAGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAGAGTGGCCTGCTCAAACCTGCCCACTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CCA 72 bp TCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTaGCCACGAAGGGTGACAGGGTGTGGATGTGATGGC +
Preference number: 3 (lower is better)
Translates to: STFSIQLATVWH*PRRVTGCGCDG
Trigger: GCCATCACATCCACACCCTGTCACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR TCA 72 bp AGAGCTGGGGAAGTTGTAAATGTGGTTGTTAGAGGGTaGCGGGGCATGGAGGTGATGGCTCTGATCCACATT +
Preference number: 3 (lower is better)
Translates to: RAGEVVNVVVRG*RGMEVMALIHI
Trigger: AATGTGGATCAGAGCCATCACCTCCATGCCCCGTCACCCTCTAACAACCACATTTACAACTTCCCCAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 72 bp ACTCTTCTGTGCAAAACTCCTCCTGCATACCAAAGCTaGTTGGTGCTCTCACGCACCATGAAGACCGGTTCA +
Preference number: 3 (lower is better)
Translates to: TLLCKTPPAYQS*LVLSRTMKTGS
Trigger: TGAACCGGTCTTCATGGTGCGTGAGAGCACCAAGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 72 bp TGGACACTTTGCTCAGGAGCCTCTCAAATGCCTCTCTaGCTCTATAGTCTACTGGAAACCAGAGTGAGAGTG +
Preference number: 3 (lower is better)
Translates to: WTLCSGASQMPL*LYSLLETRVRV
Trigger: CACTCTCACTCTGGTTTCCAGTAGACTATAGAGGCAGAGAGGCATTTGAGAGGCTCCTGAGCAAAGTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CAA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGGCTACACTGGACACTTaGCTCAGGAGCCTCTCAAAT +
Preference number: 3 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVATLDT*LRSLSN
Trigger: ATTTGAGAGGCTCCTGAGCAAAGTGTCCAGTGTAGC...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 72 bp GTTCCTCCTGAATGTATACACTGTGAGAGTAGGACTTaGCTGTCGCATTCCTTCTCAGCTCTCCAGTATCCA +
Preference number: 3 (lower is better)
Translates to: VPPECIHCESRT*LSHSFSALQYP
Trigger: TGGATACTGGAGAGCTGAGAAGGAATGCGACAGGCAAGTCCTACTCTCACAGTGTATACATTCAGGAGGAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CCA 72 bp GGTAAGGGCTTGGGAAAATACCTTGCAAGAGAATGTTaGCAATGGCCGTGCCTTGTGCACAGTGAGTTAGTT +
Preference number: 3 (lower is better)
Translates to: GKGLGKYLAREC*QWPCLVHSELV
Trigger: AACTAACTCACTGTGCACAAGGCACGGCCATTGCCAACATTCTCTTGCAAGGTATTTTCCCAAGCCCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CCA 72 bp CTAAATTCTACTTTTAGCATCCAACTAGCTACTGTCTaGCACTGGCCACGAAGGGTGACAGGGTGTGGATGT +
Preference number: 3 (lower is better)
Translates to: LNSTFSIQLATV*HWPRRVTGCGC
Trigger: ACATCCACACCCTGTCACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CAA 90 bp GAAACCAGAGTGAGAGTGATTTTGGTGCCAAATTTCCTCTCAGACTCATCCATGTTCATAGCTAAACCGTaGTCCCTGTGGAATGCCCCC +
Preference number: 3 (lower is better)
Translates to: ETRVRVILVPNFLSDSSMFIAKP*SLWNAP
Trigger: GGGGGCATTCCACAGGGACAACGGTTTAGCTATGAA...CATGGATGAGTCTGAGAGGAAATTTGGCACCAAAATCACTCTCACTCTGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CAA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATCATGGAATAAGTCCATaGTCTCTCAGCATCAAACAA +
Preference number: 3 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANHGISP*SLSIKQ
Trigger: TTGTTTGATGCTGAGAGACAATGGACTTATTCCATG...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 72 bp TCGCATTCCTTCTCAGCTCTCCAGTATCCAGGCAAGTaGTGCCACGTGACAGATGCTCAAAACAAAAATGAT +
Preference number: 3 (lower is better)
Translates to: SHSFSALQYPGK*CHVTDAQNKND
Trigger: ATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTTGCCTGGATACTGGAGAGCTGAGAAGGAATGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CAA 90 bp TCTCCTCCCACTTCCATGTTGTCCTACAGGTGTTTGAAAATACTTGTCCCATCTGCGCCTGGCCAAGACTaGGAGTTATTCTTTAGAGTA +
Preference number: 3 (lower is better)
Translates to: SPPTSMLSYRCLKILVPSAPGQD*ELFFRV
Trigger: TACTCTAAAGAATAACTCCAAGTCTTGGCCAGGCGC...AGATGGGACAAGTATTTTCAAACACCTGTAGGACAACATGGAAGTGGGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CAA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGATCATGGAAACAGAATaGGGTAAGGGCTTGGGAAAA +
Preference number: 3 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVIMETE*GKGLGK
Trigger: TTTTCCCAAGCCCTTACCCAATTCTGTTTCCATGAT...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR TCA 72 bp CACTCTCTGGACAAATGGGAAATGACAGCTAATTACTaGACCCTTGAGAAGGCCTGCCAGGTTTGTAATGAT +
Preference number: 3 (lower is better)
Translates to: HSLDKWEMTANY*TLEKACQVCND
Trigger: ATCATTACAAACCTGGCAGGCCTTCTCAAGGGTTCAGTAATTAGCTGTCATTTCCCATTTGTCCAGAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR TCA 72 bp TATTTTGTGTTGGACACTCTCTGGACAAATGGGAAATaGCAGCTAATTACTGAACCCTTGAGAAGGCCTGCC +
Preference number: 3 (lower is better)
Translates to: YFVLDTLWTNGK*QLITEPLRRPA
Trigger: GGCAGGCCTTCTCAAGGGTTCAGTAATTAGCTGTCATTTCCCATTTGTCCAGAGAGTGTCCAACACAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR GCA 72 bp TACGGGCCAAGGGTCACCAGTCATATAATACCGAAATaGTCAGATGGCACAGAATGCATGAAGTTAACATCT +
Preference number: 3 (lower is better)
Translates to: YGPRVTSHIIPK*SDGTECMKLTS
Trigger: AGATGTTAACTTCATGCATTCTGTGCCATCTGAGCATTTCGGTATTATATGACTGGTGACCCTTGGCCCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CAA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGGGGCAGATTCCTGCTTaGCAGACAAGTCAACAAAGG +
Preference number: 3 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKGQIPA*QTSQQR
Trigger: CCTTTGTTGACTTGTCTGCAAAGCAGGAATCTGCCC...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CAA 90 bp ATAATTATAGATTTGAAAAAGACCTCAGAGATCCTTTGGCTTAATCTCTCCCCCCCTTGCAAGAGAATGTaGGCAATGGCCGTGCCTTGT +
Preference number: 3 (lower is better)
Translates to: IIIDLKKTSEILWLNLSPPCKRM*AMAVPC
Trigger: ACAAGGCACGGCCATTGCCAACATTCTCTTGCAAGG...GGGGGAGAGATTAAGCCAAAGGATCTCTGAGGTCTTTTTCAAATCTATAATTAT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR TCA 72 bp CTGCATACCAAAGCTGCTTGGTGCTCTCACGCACCATaGAGACCGGTTCAGAAAGAACATTTTATGTTTTTA +
Preference number: 3 (lower is better)
Translates to: LHTKAAWCSHAP*RPVQKEHFMFL
Trigger: TAAAAACATAAAATGTTCTTTCTGAACCGGTCTTCATGGTGCGTGAGAGCACCAAGCAGCTTTGGTATGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CAA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTTTCATAGCTAAACCGTaGTCCCTGTGGAATGCCCCC +
Preference number: 3 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVFIAKP*SLWNAP
Trigger: GGGGGCATTCCACAGGGACAACGGTTTAGCTATGAA...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
3UTR GCA 72 bp TTCCAGTCAGCTGGCTATCTTCCACAGTCAGTAGAGTaGCAGAAATCTGATGTAACAGTTTCAGATGATATT +
Preference number: 3 (lower is better)
Translates to: FQSAGYLPQSVE*QKSDVTVSDDI
Trigger: AATATCATCTGAAACTGTTACATCAGATTTCTGGCACTCTACTGACTGTGGAAGATAGCCAGCTGACTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CAA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGTCATGGTCTCTGTATTaGCTGAGGAACACAGATTTT +
Preference number: 3 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLSWSLY*LRNTDF
Trigger: AAAATCTGTGTTCCTCAGCAAATACAGAGACCATGA...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CAA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGTTGTCCTACAGGTGTTaGAAAATACTTGTCCCATCT +
Preference number: 3 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKLSYRC*KILVPS
Trigger: AGATGGGACAAGTATTTTCAAACACCTGTAGGACAA...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR-3UTR CAA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCATGAAGTGTGAAATTTaGGGCCCCAAATTTCATAGC +
Preference number: 3 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIMKCEI*GPKFHS
Trigger: GCTATGAAATTTGGGGCCCAAAATTTCACACTTCAT...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
3UTR-3UTR CAA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTATGAAGTGTGAAATTTaGGGCCCCAAATTTCATAGC +
Preference number: 3 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVMKCEI*GPKFHS
Trigger: GCTATGAAATTTGGGGCCCAAAATTTCACACTTCAT...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
3UTR GCA 72 bp ATTAGAATTCATACACTAGTACCCAAAGACATGGGATaGATACCAGTTAAGTACGTATCCAACAACATACAA +
Preference number: 3 (lower is better)
Translates to: IRIHTLVPKDMG*IPVKYVSNNIQ
Trigger: TTGTATGTTGTTGGATACGTACTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCACACCAGGCAGCAGGTaGGAGCCCAGCGTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPTPGSR*EPSVRC
Trigger: GCAGCGCACGCTGGGCTCTCACCTGCTGCCTGGTGT...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCTCCTGGCCTTGGGCCTaGAGCTGCCGTGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPSWPWA*SCRALA
Trigger: TGCCAGAGCACGGCAGCTGCAGGCCCAAGGCCAGGA...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCTGCTGCTCCTGGCCTTaGGCCTGCAGCTGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPCCSWP*ACSCRA
Trigger: AGCACGGCAGCTGCAGGCCCAAGGCCAGGAGCAGCA...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCGTTGTCCCTGTGGAATaGCCCCTACTCCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPVVPVE*PLLPAP
Trigger: TGGGGCCGGGAGTAGGGGGCATTCCACAGGGACAAC...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR TCA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATAAGGGACCTCCGCAATaGCCAGCCTGTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANKGPPQ*PACPPG
Trigger: CCCTGGAGGACAGGCTGGTCATTGCGGAGGTCCCTT...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATCAGACTTGGTCCCCATaGGGAGCTGGGTTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANQTWSP*GAGLAQ
Trigger: CTGAGCCAACCCAGCTCCTCATGGGGACCAAGTCTG...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCAAACCGTTGTCCCTGTaGAATGCCCCCTACTCCCGG +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPKPLSL*NAPYSR
Trigger: CCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTT...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR GCA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATTTACCCAGGCTGGAGTaGAATGGCGCGATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANLPRLE*NGAIWA
Trigger: AGCCCAGATCGCGCCATTGCACTCCAGCCTGGGTAA...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCTGGCTCCGAGGTAGATaGGCTGGAACCAGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPWLRGR*AGTSCY
Trigger: GTAGCAACTGGTTCCAGCCCATCTACCTCGGAGCCA...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR GCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCAGCTTGTCCCCTTCTTaGAAGGAGAACATGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPSLSPS*KENMAP
Trigger: CGGAGCCATGTTCTCCTTGCAAGAAGGGGACAAGCT...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCGGAGTCTGGCTTGTTTaGTCGGCCTGCTTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPGVWLV*SACLSD
Trigger: ATCAGACAAGCAGGCCGACCAAACAAGCCAGACTCC...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCCTTGCAAGGAGAACATaGCTCCGAGGTAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPLARRT*LRGRWA
Trigger: AGCCCATCTACCTCGGAGCCATGTTCTCCTTGCAAG...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCGCTACTGTCTGGCACTaGCCACGAAGGGTGACAGGG +
Preference number: 4 (lower is better)
Translates to: EESRIMVQEDSFLALDQPATVWH*PRRVTG
Trigger: CCCTGTCACCCTTCGTGGCCAGTGCCAGACAGTAGC...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp GGTTTGAGCAGGCCACTCTTCTGTGCAAAACTCCTCCTGCATACCAAAGCTGCTCTCCCTCCCAAACCCTaGATACACCCCATTAACCCC +
Preference number: 4 (lower is better)
Translates to: GLSRPLFCAKLLLHTKAALPPKP*IHPINP
Trigger: GGGGTTAATGGGGTGTATTCAGGGTTTGGGAGGGAG...AGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAGAGTGGCCTGCTCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGGACAGGGTGTGGATGTaGTGGCTCCCTCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVDRVWM*WLPLSL
Trigger: CAGGCTCAGAGGGAGCCATCACATCCACACCCTGTC...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCCCCAGCGTGCGCTGCTaGTCCTGGCCTTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAPSVRC*SWPWAC
Trigger: GCAGGCCCAAGGCCAGGAGCAGCAGCGCACGCTGGG...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp GAAACCAGAGTGAGAGTGATTTTGGTGCCAAATTTCCTCTCAGACTCATCCATGGGTGAGAGCCCAGCGTaGGCTGCTGCTCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ETRVRVILVPNFLSDSSMGESPA*AAAPGL
Trigger: AAGGCCAGGAGCAGCAGCGCACGCTGGGCTCTCACC...CATGGATGAGTCTGAGAGGAAATTTGGCACCAAAATCACTCTCACTCTGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCTTCCTCCATCTGAGATaGCCTTTCCCTGTGGTCATC +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPFLHLR*PFPVVI
Trigger: GATGACCACAGGGAAAGGGCATCTCAGATGGAGGAA...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCCCTAGCTCTCTTCTCTaGGGAGCTACAGTAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPPSSLL*GATVEV
Trigger: GACTTCTACTGTAGCTCCCCAGAGAAGAGAGCTAGG...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATTGCTCTCACGCACCATaGAGACCGGTTCAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANCSHAP*RPVQKE
Trigger: TTCTTTCTGAACCGGTCTTCATGGTGCGTGAGAGCA...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp GAAACCAGAGTGAGAGTGATTTTGGTGCCAAATTTCCTCTCAGACTCATCCATGAGCACTTTGGAAGGCTaGGGCGGGCGGATCACGAGG +
Preference number: 4 (lower is better)
Translates to: ETRVRVILVPNFLSDSSMSTLEG*GGRITR
Trigger: CCTCGTGATCCGCCCGCCTCAGCCTTCCAAAGTGCT...CATGGATGAGTCTGAGAGGAAATTTGGCACCAAAATCACTCTCACTCTGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCCTTGCAGCTCCGAGTTaGAGAGAAGCCATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPLAAPS*REAISE
Trigger: TTCAGAAATGGCTTCTCTCCAACTCGGAGCTGCAAG...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCATAACACCAATGTCTTaGGCCACAAGGATATCCCCC +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPITPMS*ATRISP
Trigger: GGGGGATATCCTTGTGGCCCAAGACATTGGTGTTAT...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCGTAGTCTCCCGACTCTaGGATCAGCAGGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPVVSRL*DQQEFV
Trigger: AACAAATTCCTGCTGATCCCAGAGTCGGGAGACTAC...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR TCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGATCCAGGGGGATTACTaGCCAGCACAGAGGCGGAAT +
Preference number: 4 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVIQGDY*PAQRRN
Trigger: ATTCCGCCTCTGTGCTGGTCAGTAATCCCCCTGGAT...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCGGTGCCTTGGATTTCTaGACTAGACTTGGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPGALDF*TRLGKL
Trigger: CAACTTTCCAAGTCTAGTGCAGAAATCCAAGGCACC...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CCA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGCAGGCTGGAGTGCAATaGCGCGATCTGGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKQAGVQ*RDLGSP
Trigger: CGGTGAGCCCAGATCGCGCCATTGCACTCCAGCCTG...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCCCCTGGGCCCGGAGCTaGCTGACAAGCAGGTATGTG +
Preference number: 4 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVPWARS*LTSRYV
Trigger: CACATACCTGCTTGTCAGCCAGCTCCGGGCCCAGGG...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCTGTCAGGTGTGCCCTTaGCTTATCTCCGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: EESRIMVQEDSFLALDQPCQVCP*LISVCS
Trigger: AGAGCAGACGGAGATAAGCCAAGGGCACACCTGACA...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCCTCCTTGGAAACAAATaGGCAGATTCCTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPLLGNK*ADSCFA
Trigger: TGCAAAGCAGGAATCTGCCCATTTGTTTCCAAGGAG...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 72 bp CTTCTGTGCAAAACTCCTCCTGCATACCAAAGCTGCTaGGTGCTCTCACGCACCATGAAGACCGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LLCKTPPAYQSC*VLSRTMKTGSE
Trigger: TTCTGAACCGGTCTTCATGGTGCGTGAGAGCACCAAGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTACTCCCGGCCTTAGATaGTCCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVTPGLR*STHLGL
Trigger: GAGGCCAAGGTGGGTGGATCATCTAAGGCCGGGAGT...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCGACAAGCCCTTTGTTTaGGTATCTCCAGGGACTGAG +
Preference number: 4 (lower is better)
Translates to: EESRIMVQEDSFLALDQPDKPFV*VSPGTE
Trigger: CTCAGTCCCTGGAGATACTCAAACAAAGGGCTTGTC...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCGTTGTCCCTGTGGAATaGCCCCTACTCCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAVVPVE*PLLPAP
Trigger: TGGGGCCGGGAGTAGGGGGCATTCCACAGGGACAAC...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR GCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGCCTCGGCCATGCTCCTaGTGCTCCTGGAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKPRPCS*CSWRHL
Trigger: GAGGTGCCTCCAGGAGCAGCAGGAGCATGGCCGAGG...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCGGGCAACCTTGTAACTaGAACTCTGTAGCCCTAGCT +
Preference number: 4 (lower is better)
Translates to: EESRIMVQEDSFLALDQPGQPCN*NSVALA
Trigger: AGCTAGGGCTACAGAGTTGCAGTTACAAGGTTGCCC...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCCTAGACTTGGAAAGTTaGCCAACTGGTGATAGTATG +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPLDLES*PTGDSM
Trigger: CATACTATCACCAGTTGGCCAACTTTCCAAGTCTAG...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCTTCCCAGTGCAGAGCTaGGAACTGATTTTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPFPVQS*ELIFKV
Trigger: CACTTTAAAAATCAGTTCCCAGCTCTGCACTGGGAA...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCCGCCTGGCCAAGACTTaGAGTTATTCTTTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPRLAKT*SYSLEY
Trigger: ATACTCTAAAGAATAACTCCAAGTCTTGGCCAGGCG...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCGCAGCTGCCGTGCTCTaGCAGCATTTCCACACTGGC +
Preference number: 4 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVAAAVL*QHFHTG
Trigger: GCCAGTGTGGAAATGCTGCCAGAGCACGGCAGCTGC...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCCTTGCAAGAGAATGTTaGCAATGGCCGTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: EESRIMVQEDSFLALDQPLAREC*QWPCLV
Trigger: CACAAGGCACGGCCATTGCCAACATTCTCTTGCAAG...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATAAGAGTCCAGGATTATaGTTCAGGAAGACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANKSPGL*FRKTAS
Trigger: GGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTT...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCGAGAGAAGCCATTTCTaGATGACTCAGTGTATGAAT +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPERSHF*MTQCMN
Trigger: ATTCATACACTGAGTCATTCAGAAATGGCTTCTCTC...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR TCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCACTCCCGGCCTTAGATaGTCCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSATPGLR*STHLGL
Trigger: GAGGCCAAGGTGGGTGGATCATCTAAGGCCGGGAGT...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR TCA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATGCTGGGAAGTTAGAATaGGTGTGTCTGAGACTAAAT +
Preference number: 4 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANAGKLE*VCLRLN
Trigger: ATTTAGTCTCAGACACACTCATTCTAACTTCCCAGC...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCAGCAGGAGAATGGCGTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVSRRMA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCT...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGTTACCCAGGCTGGAGTaGAATGGCGCGATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKLPRLE*NGAIWA
Trigger: AGCCCAGATCGCGCCATTGCACTCCAGCCTGGGTAA...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR GCA 90 bp TCTCCTCCCACTTCCATGTTGTCCTACAGGTGTTTGAAAATACTTGTCCCATCTCTGGGAGGCAGAGGTTaGAGTGAACTGAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SPPTSMLSYRCLKILVPSLGGRG*SELRSC
Trigger: GCAGGATCTCAGTTCACTGCAACCTCTGCCTCCCAG...AGATGGGACAAGTATTTTCAAACACCTGTAGGACAACATGGAAGTGGGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCTGGAGCCAAGAGTTCTaGTGTGCTCTATTATTGATT +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPWSQEF*CALLLI
Trigger: AATCAATAATAGAGCACACCAGAACTCTTGGCTCCA...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCGCTACTTTATTTACTTaGCACTGTGTGTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPATLFT*HCVSCS
Trigger: GGAACAAGACACACAGTGCCAAGTAAATAAAGTAGC...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCATGTGGAAAAATTGGTaGAGGATTTTGCCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPMWKNW*RILPLK
Trigger: TTTCAGAGGCAAAATCCTTCACCAATTTTTCCACAT...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR TCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCCCAACTCCTTCTGTGTaGACATTCATGAGACATACC +
Preference number: 4 (lower is better)
Translates to: EESRIMVQEDSFLALDQPPTPSV*TFMRHT
Trigger: GGTATGTCTCATGAATGTTCACACAGAAGGAGTTGG...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGTGCCTCTCCTGCCCTTaGCATATTAGCGTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVCLSCP*HISVGK
Trigger: TTTTCCTACGCTAATATGTCAAGGGCAGGAGAGGCA...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCAACAGTGGGCAGGTTTaGGCAGGCCACTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVNSGQV*AGHSSV
Trigger: CACAGAAGAGTGGCCTGCTCAAACCTGCCCACTGTT...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATTGTCCTACAGGTGTTTaGAAATACTTGTCCCATCTT +
Preference number: 4 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANCPTGV*KYLSHL
Trigger: AAGATGGGACAAGTATTTTCAAACACCTGTAGGACA...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCACACATGGAAGTCAATaGACAAAAGGCCACATAATT +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPTHGSQ*TKGHII
Trigger: AATTATGTGGCCTTTTGTTCATTGACTTCCATGTGT...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp TCTCCTCCCACTTCCATGTTGTCCTACAGGTGTTTGAAAATACTTGTCCCATCTTGTGATGGCTCCCTCTaGGCCTGGGTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SPPTSMLSYRCLKILVPSCDGSL*AWVSSS
Trigger: AGATGAAGAAACCCAGGCTCAGAGGGAGCCATCACA...AGATGGGACAAGTATTTTCAAACACCTGTAGGACAACATGGAAGTGGGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCTGGCTTATCTCCGTCTaGTCTAAGAGGTGCATAAAC +
Preference number: 4 (lower is better)
Translates to: EESRIMVQEDSFLALDQPWLISV*SKRCIN
Trigger: GTTTATGCACCTCTTAGAGCAGACGGAGATAAGCCA...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp GAAACCAGAGTGAGAGTGATTTTGGTGCCAAATTTCCTCTCAGACTCATCCATGCACAACTGTCAGGTGTaGCCTTGGCTTATCTCCGTC +
Preference number: 4 (lower is better)
Translates to: ETRVRVILVPNFLSDSSMHNCQV*PWLISV
Trigger: GACGGAGATAAGCCAAGGGCACACCTGACAGTTGTG...CATGGATGAGTCTGAGAGGAAATTTGGCACCAAAATCACTCTCACTCTGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCATAAATTGGCAACTCTaGGGACTTTTTGTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPINWQL*GLFVCD
Trigger: GTCACAAACAAAAAGTCCCCAGAGTTGCCAATTTAT...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCCACAGTGATGGAGTCTaGCTTGTTTGGTCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVHSDGV*LVWSAC
Trigger: GCAGGCCGACCAAACAAGCCAGACTCCATCACTGTG...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTGTGCTCCTGCTACACTaGACACTTTGCTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVVLLLH*TLCSGA
Trigger: GGCTCCTGAGCAAAGTGTCCAGTGTAGCAGGAGCAC...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp GAAACCAGAGTGAGAGTGATTTTGGTGCCAAATTTCCTCTCAGACTCATCCATGTCACCTACAGAACAGTaGGCAGGTTTGAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: ETRVRVILVPNFLSDSSMSPTEQ*AGLSRP
Trigger: TGGCCTGCTCAAACCTGCCCACTGTTCTGTAGGTGA...CATGGATGAGTCTGAGAGGAAATTTGGCACCAAAATCACTCTCACTCTGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATTTCTTCCTTCCAGGCTaGTGTGGTATTTTCATCTTA +
Preference number: 4 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANFFLPG*CGIFIL
Trigger: TAAGATGAAAATACCACACCAGCCTGGAAGGAAGAA...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGCAACTAGCTACTGTCTaGCACTGGCCACGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKQLATV*HWPRRV
Trigger: CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTG...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCCAAGCAGGTATGTGGTaGGTCCTGCAAGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAQAGMW*VLQGRG
Trigger: TCCCCTTCCTTGCAGGACTCACCACATACCTGCTTG...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGACTGGCCACGAAGGGTaGCAGGGTGTGGATGTGATG +
Preference number: 4 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLTGHEG*QGVDVM
Trigger: CATCACATCCACACCCTGTCACCCTTCGTGGCCAGT...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp ATAATTATAGATTTGAAAAAGACCTCAGAGATCCTTTGGCTTAATCTCTCCCCCGGCCTGCAGCTGCCGTaGTCTGGCAGCATTTCCACA +
Preference number: 4 (lower is better)
Translates to: IIIDLKKTSEILWLNLSPGLQLP*SGSIST
Trigger: TGTGGAAATGCTGCCAGAGCACGGCAGCTGCAGGCC...GGGGGAGAGATTAAGCCAAAGGATCTCTGAGGTCTTTTTCAAATCTATAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCTTAATGAAGTGCTCCTaGTACACTGGACACTTTGCT +
Preference number: 4 (lower is better)
Translates to: EESRIMVQEDSFLALDQPLMKCS*YTGHFA
Trigger: AGCAAAGTGTCCAGTGTAGCAGGAGCACTTCATTAA...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCCCTGCATACCAAAGCTaGTTGGTGCTCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAPAYQS*LVLSRT
Trigger: GGTGCGTGAGAGCACCAAGCAGCTTTGGTATGCAGG...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTGGCTCCGAGGTAGATaGGCTGGAACCAGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAWLRGR*AGTSCY
Trigger: GTAGCAACTGGTTCCAGCCCATCTACCTCGGAGCCA...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTCAGGCTGGAGTGCAATaGCGCGATCTGGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVQAGVQ*RDLGSP
Trigger: CGGTGAGCCCAGATCGCGCCATTGCACTCCAGCCTG...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGGCTGAAGCAGGAGAATaGCGTGAACCTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLAEAGE*REPGRQ
Trigger: CTGCCTCCCAGGTTCACGCCATTCTCCTGCTTCAGC...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGTCATTCGGTTCTTGGTaGAGGCCAGGCCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKSFGSW*RPGLVH
Trigger: ATGAACTAGGCCTGGCCTTCACCAAGAACCGAATGA...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR TCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTCAGACTTGGTCCCCATaGGGAGCTGGGTTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVQTWSP*GAGLAQ
Trigger: CTGAGCCAACCCAGCTCCTCATGGGGACCAAGTCTG...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR TCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGGTCCTAGGAATTGGTTaGGGGAATATTCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVVLGIG*GNILLS
Trigger: TGATAGGAGAATATTCCCTCAACCAATTCCTAGGAC...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGAGGCAGAGGTTGCAGTaGACTGAGATCCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLRQRLQ*TEILPL
Trigger: CAGTGGCAGGATCTCAGTTCACTGCAACCTCTGCCT...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp GGTTTGAGCAGGCCACTCTTCTGTGCAAAACTCCTCCTGCATACCAAAGCTGCTACATATTTCAGGAAGTaGAAACGTACACTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GLSRPLFCAKLLLHTKAATYFRK*KRTLFP
Trigger: AGGGAAAAGTGTACGTTTTCACTTCCTGAAATATGT...AGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAGAGTGGCCTGCTCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp TCTCCTCCCACTTCCATGTTGTCCTACAGGTGTTTGAAAATACTTGTCCCATCTATGACAGCTAATTACTaGACCCTTGAGAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SPPTSMLSYRCLKILVPSMTANY*TLEKAC
Trigger: GCAGGCCTTCTCAAGGGTTCAGTAATTAGCTGTCAT...AGATGGGACAAGTATTTTCAAACACCTGTAGGACAACATGGAAGTGGGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCGTATGTGGTGAGTCCTaGAAGGAAGGGGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAVCGES*KEGEQH
Trigger: GTGTTGCTCCCCTTCCTTGCAGGACTCACCACATAC...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGCCACAGTCAGTAGAGTaGCAGAAATCTGATGTAACA +
Preference number: 4 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVPQSVE*QKSDVT
Trigger: TGTTACATCAGATTTCTGGCACTCTACTGACTGTGG...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCCAGGCCACTCTTCTGTaGAAAACTCCTCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVQATLL*KTPPAY
Trigger: GTATGCAGGAGGAGTTTTGCACAGAAGAGTGGCCTG...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGCATGAGGAGCTGGGTTaGCTCAGGGTAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLHEELG*LRVAVC
Trigger: ACAGACAGCTACCCTGAGCCAACCCAGCTCCTCATG...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCCTTGCAAGGAGAACATaGCTCCGAGGTAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSALARRT*LRGRWA
Trigger: AGCCCATCTACCTCGGAGCCATGTTCTCCTTGCAAG...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCGTGAGCCACTGCGCCTaGCCAAGACTTGGAGTTATT +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAVSHCA*PRLGVI
Trigger: AATAACTCCAAGTCTTGGCCAGGCGCAGTGGCTCAC...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTTGTCCTTTTAGAGCCTaGAACTGCACACAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVCPFRA*NCTQAS
Trigger: AGAGGCCTGTGTGCAGTTCCAGGCTCTAAAAGGACA...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 72 bp ATTTGCTCCTTGGAAACAAATGGGCAGATTCCTGCTTaGCAGACAAGTCAACAAAGGCTAGGAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: ICSLETNGQIPA*QTSQQRLGEQS
Trigger: GCTCTGTTCTCCTAGCCTTTGTTGACTTGTCTGCAAAGCAGGAATCTGCCCATTTGTTTCCAAGGAGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTCTCTTGTTTACGTATaGCAAGGCCAGGCACCAGAC +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSASLVYV*QGQAPD
Trigger: GTCTGGTGCCTGGCCTTGTCATACGTAAACAAGAGA...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR TCA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGCTCATATGCTGTAGATaGCATGAAAACCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVLICCR*HENQLL
Trigger: AAGGAGTTGGTTTTCATGTCATCTACAGCATATGAG...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTGTGGTTGTTAGAGGGTaGCGGGGCATGGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVVVVRG*RGMEVM
Trigger: CATCACCTCCATGCCCCGTCACCCTCTAACAACCAC...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTGGGCTGGAACCAGTTaGTACCTACTTCGCATACAG +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAWAGTS*YLLRIQ
Trigger: CTGTATGCGAAGTAGGTAGCAACTGGTTCCAGCCCA...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR GCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGAGCTTGTCCCCTTCTTaGAAGGAGAACATGGCTCCG +
Preference number: 4 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKSLSPS*KENMAP
Trigger: CGGAGCCATGTTCTCCTTGCAAGAAGGGGACAAGCT...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTCAAGCAATTCTTCTaGCTCGGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAFKQFF*LGLLSS
Trigger: GCTACTCAGGAGGCCGAGGCAGAAGAATTGCTTGAA...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR GCA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGGGCAGATTCCTGCTTTaGAGACAAGTCAACAAAGGC +
Preference number: 4 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKGRFLL*RQVNKG
Trigger: GCCTTTGTTGACTTGTCTGCAAAGCAGGAATCTGCC...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGGTGCAAAACTCCTCCTaGATACCAAAGCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKVQNSS*IPKLLG
Trigger: ACCAAGCAGCTTTGGTATGCAGGAGGAGTTTTGCAC...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGAGTGAACTGAGATCCTaGCACTGCACTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLSELRS*HCTSAW
Trigger: CCAGGCTGAAGTGCAGTGGCAGGATCTCAGTTCACT...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGGGAGTCTGGCTTGTTTaGTCGGCCTGCTTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKGVWLV*SACLSD
Trigger: ATCAGACAAGCAGGCCGACCAAACAAGCCAGACTCC...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTAAACCGTTGTCCCTGTaGAATGCCCCCTACTCCCGG +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVKPLSL*NAPYSR
Trigger: CCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTT...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGGTGAGCCACTGCGCCTaGCCAAGACTTGGAGTTATT +
Preference number: 4 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKVSHCA*PRLGVI
Trigger: AATAACTCCAAGTCTTGGCCAGGCGCAGTGGCTCAC...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTCTCCAGGGAAGGTCTTaGCTAGGCTCATTAGCTAAT +
Preference number: 4 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVLQGRS*LGSLAN
Trigger: ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAG...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 72 bp CTCTATAGTCTACTGGAAACCAGAGTGAGAGTGATTTaGGTGCCAAATTTCCTCTCAGACTCATCCATGAGG +
Preference number: 4 (lower is better)
Translates to: LYSLLETRVRVI*VPNFLSDSSMR
Trigger: CCTCATGGATGAGTCTGAGAGGAAATTTGGCACCAAAATCACTCTCACTCTGGTTTCCAGTAGACTATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCGATCCTGGAGAACAATaGAGGTTAAGGAATCCCCCT +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSADPGEQ*RLRNPP
Trigger: AGGGGGATTCCTTAACCTTCATTGTTCTCCAGGATC...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR TCA 90 bp ATAATTATAGATTTGAAAAAGACCTCAGAGATCCTTTGGCTTAATCTCTCCCCCGAGGTTGCAGTGAACTaGGATCCTGCCACTGCACTT +
Preference number: 4 (lower is better)
Translates to: IIIDLKKTSEILWLNLSPEVAVN*DPATAL
Trigger: AAGTGCAGTGGCAGGATCTCAGTTCACTGCAACCTC...GGGGGAGAGATTAAGCCAAAGGATCTCTGAGGTCTTTTTCAAATCTATAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTCTCCCCCAACCTCTGTaGAGAATAGCTTCTACAAAA +
Preference number: 4 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVLPQPL*RIASTK
Trigger: TTTTGTAGAAGCTATTCTTCACAGAGGTTGGGGGAG...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCCTTGTTTGGTCGGCCTaGTTGTCTGATTTCACTGCA +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSALVWSA*LSDFTA
Trigger: TGCAGTGAAATCAGACAAGCAGGCCGACCAAACAAG...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR GCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGTGGGCTGGAACCAGTTaGTACCTACTTCGCATACAG +
Preference number: 4 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLWAGTS*YLLRIQ
Trigger: CTGTATGCGAAGTAGGTAGCAACTGGTTCCAGCCCA...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCGCTCACCGCAACCTCTaGCTCCCCAGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIAHRNL*LPSSSN
Trigger: ATTGCTTGAACTGGGGAGGCAGAGGTTGCGGTGAGC...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR GCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGTGTTGGCAATGGCCGTaGCTTGTGCACAGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKCWQWP*LVHSEL
Trigger: TAACTCACTGTGCACAAGGCACGGCCATTGCCAACA...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp GAAACCAGAGTGAGAGTGATTTTGGTGCCAAATTTCCTCTCAGACTCATCCATGCCCAAAGACATGGGATaGATACCAGTTAAGTACGTA +
Preference number: 4 (lower is better)
Translates to: ETRVRVILVPNFLSDSSMPKDMG*IPVKYV
Trigger: TACGTACTTAACTGGTATGCATCCCATGTCTTTGGG...CATGGATGAGTCTGAGAGGAAATTTGGCACCAAAATCACTCTCACTCTGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCGTAGTCTCCCGACTCTaGGATCAGCAGGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAVVSRL*DQQEFV
Trigger: AACAAATTCCTGCTGATCCCAGAGTCGGGAGACTAC...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTCACAGTGATGGAGTCTaGCTTGTTTGGTCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVHSDGV*LVWSAC
Trigger: GCAGGCCGACCAAACAAGCCAGACTCCATCACTGTG...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCCATGAGGAGCTGGGTTaGCTCAGGGTAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIHEELG*LRVAVC
Trigger: ACAGACAGCTACCCTGAGCCAACCCAGCTCCTCATG...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGGCAGCATTTCCACACTaGCTGTTTCCCCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKAAFPH*LFPQSS
Trigger: TGAGCTTTGGGGAAACAGCCAGTGTGGAAATGCTGC...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTAGTGTGTCTCAGAGCTaGGGAAGTTGTAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVSVSQS*GSCKCG
Trigger: ACCACATTTACAACTTCCCCAGCTCTGAGACACACT...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCGACTCAGTGTATGAATaGAAGAGAGAGACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSADSVYE*KRETGE
Trigger: CTCTCCTGTCTCTCTCTTTCATTCATACACTGAGTC...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR TCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCCCAACTCCTTCTGTGTaGACATTCATGAGACATACC +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAPTPSV*TFMRHT
Trigger: GGTATGTCTCATGAATGTTCACACAGAAGGAGTTGG...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR TCA 90 bp GAAACCAGAGTGAGAGTGATTTTGGTGCCAAATTTCCTCTCAGACTCATCCATGTTCTGCCAAATAGACTaGAACCATGCTAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: ETRVRVILVPNFLSDSSMFCQID*NHASIK
Trigger: TTTGATGCTAGCATGGTTTCAGTCTATTTGGCAGAA...CATGGATGAGTCTGAGAGGAAATTTGGCACCAAAATCACTCTCACTCTGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp GAAACCAGAGTGAGAGTGATTTTGGTGCCAAATTTCCTCTCAGACTCATCCATGCTGAATAGTTTAGGTTaGAATGGAGCCAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: ETRVRVILVPNFLSDSSMLNSLG*NGAKSS
Trigger: AGAACTCTTGGCTCCATTTCAACCTAAACTATTCAG...CATGGATGAGTCTGAGAGGAAATTTGGCACCAAAATCACTCTCACTCTGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGCAAATTCCCATTCTTTaGCCCATAAGTGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKQIPIL*PISDWL
Trigger: CAGCCAATCACTTATGGGGCAAAGAATGGGAATTTG...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR GCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTGGGGCAAATTACTTTaGCTTTCTGAGACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAWGKLL*LSETEW
Trigger: CCACTCAGTCTCAGAAAGGCAAAGTAATTTGCCCCA...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR GCA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGTCTCAAATGCCTCTCTaGCTCTATAGTCTACTGGAA +
Preference number: 4 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKSQMPL*LYSLLE
Trigger: TTCCAGTAGACTATAGAGGCAGAGAGGCATTTGAGA...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTCTCTGTAGGTCCAGCTaGCAATATGATGCAAAAATG +
Preference number: 4 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVLCRSS*QYDAKM
Trigger: CATTTTTGCATCATATTGGCAGCTGGACCTACAGAG...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGAAGAGAATAACATCTTaGACTAGTGACCTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKKRITS*TSDLGQ
Trigger: TTGCCCCAGGTCACTAGTCCAAGATGTTATTCTCTT...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGACACTTCTAGGACTCTaGGCCATAGGAAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLTLLGL*AIGKPE
Trigger: TTCTGGCTTTCCTATGGCCCAGAGTCCTAGAAGTGT...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 72 bp AAGTCTCCTCCCACTTCCATGTTGTCCTACAGGTGTTaGAAAATACTTGTCCCATCTTCCTTCAAATCACTA +
Preference number: 4 (lower is better)
Translates to: KSPPTSMLSYRC*KILVPSSFKSL
Trigger: TAGTGATTTGAAGGAAGATGGGACAAGTATTTTCAAACACCTGTAGGACAACATGGAAGTGGGAGGAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGTATCCCCCTGCAGACTaGAAATTTTCTTATAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKYPPAD*KFSYRS
Trigger: TGACCTATAAGAAAATTTTCAGTCTGCAGGGGGATA...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR TCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCTCATTCGGTTCTTGGTaGAGGCCAGGCCTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVISFGSW*RPGLVH
Trigger: ATGAACTAGGCCTGGCCTTCACCAAGAACCGAATGA...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR GCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCTTCAAGCAATTCTTCTaGCTCGGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIFKQFF*LGLLSS
Trigger: GCTACTCAGGAGGCCGAGGCAGAAGAATTGCTTGAA...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR GCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCCTTGGGAAAATACCTTaGAAGAGAATGTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVLGKIP*KRMLAM
Trigger: CATTGCCAACATTCTCTTGCAAGGTATTTTCCCAAG...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTCCCTTCCCCCATaGAATAAGTCCATTGTCTCT +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAFSLPP*NKSIVS
Trigger: AGAGACAATGGACTTATTCCATGGGGGAAGGGAAAA...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCAGAGAATGTTGGCAATaGCCGTGCCTTGTGCACAGT +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIRECWQ*PCLVHS
Trigger: ACTGTGCACAAGGCACGGCCATTGCCAACATTCTCT...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCCCTTCCAGGCTGGTGTaGTATTTTCATCTTAAAATG +
Preference number: 4 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVPSRLV*YFHLKM
Trigger: CATTTTAAGATGAAAATACCACACCAGCCTGGAAGG...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCATGTGGAAAAATTGGTaGAGGATTTTGCCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVMWKNW*RILPLK
Trigger: TTTCAGAGGCAAAATCCTTCACCAATTTTTCCACAT...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCCTCATATGCTGTAGATaGCATGAAAACCAACTCCTT +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSALICCR*HENQLL
Trigger: AAGGAGTTGGTTTTCATGTCATCTACAGCATATGAG...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR TCA 90 bp ATAATTATAGATTTGAAAAAGACCTCAGAGATCCTTTGGCTTAATCTCTCCCCCATAAACTTGCTGATGTaGAGGTGCAAACTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: IIIDLKKTSEILWLNLSPINLLM*RCKLLS
Trigger: GGACAGGAGTTTGCACCTTCACATCAGCAAGTTTAT...GGGGGAGAGATTAAGCCAAAGGATCTCTGAGGTCTTTTTCAAATCTATAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGACAGAAGTTCTGACATaGGCCCTATTAGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLTEVLT*ALLGMS
Trigger: AGACATTCCTAATAGGGCTCATGTCAGAACTTCTGT...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCGTCCAGCTGCCAATATaGTGCAAAAATGTTAATATC +
Preference number: 4 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVVQLPI*CKNVNI
Trigger: GATATTAACATTTTTGCATCATATTGGCAGCTGGAC...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGAATTGGGTAAGGGCTTaGGAAAATACCTTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKNWVRA*ENTLQE
Trigger: CTCTTGCAAGGTATTTTCCCAAGCCCTTACCCAATT...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGAGGGGTATTTTGTGTTaGACACTCTCTGGACAAATG +
Preference number: 4 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLRGILC*TLSGQM
Trigger: CATTTGTCCAGAGAGTGTCCAACACAAAATACCCCT...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 72 bp GAATTAATCCCCAATGTCACAATCATGGAAACAGAATaGGGTAAGGGCTTGGGAAAATACCTTGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: ELIPNVTIMETE*GKGLGKYLARE
Trigger: TTCTCTTGCAAGGTATTTTCCCAAGCCCTTACCCAATTCTGTTTCCATGATTGTGACATTGGGGATTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 72 bp AAGTTCAGCTACTTTATTTACTTGGCACTGTGTGTCTaGTTCCTCCTGAATGTATACACTGTGAGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: KFSYFIYLALCV*FLLNVYTVRVG
Trigger: TCCTACTCTCACAGTGTATACATTCAGGAGGAACAAGACACACAGTGCCAAGTAAATAAAGTAGCTGAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTCCAAAGAGATGTCACTaGCGTTCACCATTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVPKRCH*RSPLAC
Trigger: ACAAGCTAATGGTGAACGTCAGTGACATCTCTTTGG...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR TCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCCCAAAGAGATGTCACTaGCGTTCACCATTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIPKRCH*RSPLAC
Trigger: ACAAGCTAATGGTGAACGTCAGTGACATCTCTTTGG...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR TCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCGCAAGAAAACTCTACTaGATACAAGCAACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAARKLY*IQATVV
Trigger: TACAACAGTTGCTTGTATTCAGTAGAGTTTTCTTGC...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR TCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCGGTGTGCTCTATTATTaGTTCAACCTGACATATTTC +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSAGVLYY*FNLTYF
Trigger: GAAATATGTCAGGTTGAATCAATAATAGAGCACACC...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTACCCTTGAGAAGGCCTaGCAGGTTTGTAATGATCAA +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVTLEKA*QVCNDQ
Trigger: TTGATCATTACAAACCTGGCAGGCCTTCTCAAGGGT...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCCTTTCTGAGACTGAGTaGTCTGACCTGAAAATTTTT +
Preference number: 4 (lower is better)
Translates to: RNSPILQPILIIYLLSSALSETE*SDLKIF
Trigger: AAAAATTTTCAGGTCAGACCACTCAGTCTCAGAAAG...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CCA 90 bp ATAATTATAGATTTGAAAAAGACCTCAGAGATCCTTTGGCTTAATCTCTCCCCCTTCCCAGTGCAGAGCTaGGAACTGATTTTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: IIIDLKKTSEILWLNLSPFPVQS*ELIFKV
Trigger: CACTTTAAAAATCAGTTCCCAGCTCTGCACTGGGAA...GGGGGAGAGATTAAGCCAAAGGATCTCTGAGGTCTTTTTCAAATCTATAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCACATTCTCTCACCACTaGTGCAAAAGGATTCAAGGC +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVITFSHH*CKRIQG
Trigger: GCCTTGAATCCTTTTGCACCAGTGGTGAGAGAATGT...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCAGTAGAAAATTCCTTTaGGGATCAAGCCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVISRKFL*GSSQRG
Trigger: CCCTCTCTGGCTTGATCCCCAAAGGAATTTTCTACT...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
3UTR CAA 72 bp AACTCGCCAATCCTCCAACCCATCTTAATAATATATTaGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCA +
Preference number: 4 (lower is better)
Translates to: NSPILQPILIIY*LSSAFFQLVLS
Trigger: TGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
3UTR CAA 72 bp TTGAAATGGAGCCAAGAGTTCTGGTGTGCTCTATTATaGATTCAACCTGACATATTTCAGGAAGTGAAAACG +
Preference number: 4 (lower is better)
Translates to: LKWSQEFWCALL*IQPDIFQEVKT
Trigger: CGTTTTCACTTCCTGAAATATGTCAGGTTGAATCAATAATAGAGCACACCAGAACTCTTGGCTCCATTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCAGGGCTGATAGAATCTaGAAGAAAATGCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIRADRI*KKMPKR
Trigger: TCTCTTGGGCATTTTCTTTCAGATTCTATCAGCCCT...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR TCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCCATCTTTCATTCTCATaGGCTCATTTGCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIHLSFS*AHLLLG
Trigger: TCCAAGGAGCAAATGAGCTCATGAGAATGAAAGATG...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTCCTATTAGGAATGTCTaGCTGTGCCTTTCCGTAAAA +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVPIRNV*LCLSVK
Trigger: TTTTACGGAAAGGCACAGTCAGACATTCCTAATAGG...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCTGGACAAATGGGAAATaGCAGCTAATTACTGAACCC +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIWTNGK*QLITEP
Trigger: GGGTTCAGTAATTAGCTGTCATTTCCCATTTGTCCA...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR GCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTGAATCTGAAAGAAAATaGCCAAGAGACATGGGCCTT +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVESERK*PRDMGL
Trigger: AAGGCCCATGTCTCTTGGGCATTTTCTTTCAGATTC...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCTCTTGTTCTTTCCTCTaGAGTCTCAGAGGTATAGGA +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVISCSFL*SLRGIG
Trigger: TCCTATACCTCTGAGACTCCAGAGGAAAGAACAAGA...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGTCAGCAGGAATTTGTTaGTATAGTTCATTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLSAGIC*YSSFGS
Trigger: AGAACCGAATGAACTATACCAACAAATTCCTGCTGA...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTAGCTCATTTGCTCCTTaGAAACAAATGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVSSFAP*KQMGRF
Trigger: GAATCTGCCCATTTGTTTCCAAGGAGCAAATGAGCT...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGTATTGTCCTAGGAATTaGTTGAGGGAATATTCTCCT +
Preference number: 4 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKYCPRN*LREYSP
Trigger: AGGAGAATATTCCCTCAACCAATTCCTAGGACAATA...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp ATAATTATAGATTTGAAAAAGACCTCAGAGATCCTTTGGCTTAATCTCTCCCCCCACTCTCTGGACAAATaGGAAATGACAGCTAATTAC +
Preference number: 4 (lower is better)
Translates to: IIIDLKKTSEILWLNLSPHSLDK*EMTANY
Trigger: GTAATTAGCTGTCATTTCCCATTTGTCCAGAGAGTG...GGGGGAGAGATTAAGCCAAAGGATCTCTGAGGTCTTTTTCAAATCTATAATTAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGATCAATGAAAGCACATaGGGTTTGTCACTAAAACCA +
Preference number: 4 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLINEST*GLSLKP
Trigger: TGGTTTTAGTGACAAACCCCATGTGCTTTCATTGAT...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR TCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCGGGACTTTTTGTTTGTaGCCAGATCCAGAATTACTT +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIGTFCL*PDPELL
Trigger: AAGTAATTCTGGATCTGGTCACAAACAAAAAGTCCC...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR GCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTCATATAATACCGAAATaGTCAGATGGCACAGAATGC +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVHIIPK*SDGTEC
Trigger: GCATTCTGTGCCATCTGAGCATTTCGGTATTATATG...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCTCGATGAAAATTCTTTaGAAACACCTCCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVISMKIL*KHLPEG
Trigger: ACCTTCAGGGAGGTGTTTCCAAAGAATTTTCATCGA...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR TCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCGCAAGAAAACTCTACTaGATACAAGCAACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIARKLY*IQATVV
Trigger: TACAACAGTTGCTTGTATTCAGTAGAGTTTTCTTGC...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTCTGTGTTTAGGAAAATaGCTTGCTGCAAGAATTATC +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVLCLGK*LAARII
Trigger: GATAATTCTTGCAGCAAGCCATTTTCCTAAACACAG...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CCA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCTCAGCAGGAATTTGTTaGTATAGTTCATTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVISAGIC*YSSFGS
Trigger: AGAACCGAATGAACTATACCAACAAATTCCTGCTGA...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTAGGAAATTCCTGTCTTaGGATAAATTTCCAGATCCA +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVRKFLS*DKFPDP
Trigger: TGGATCTGGAAATTTATCCCAAGACAGGAATTTCCT...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CCA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTTCCCCATTCATCAATTaGAACAAAACACTTGTCTTA +
Preference number: 4 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVSPFIN*NKTLVL
Trigger: TAAGACAAGTGTTTTGTTCCAATTGATGAATGGGGA...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS GCA 90 bp GCCCAGCGTGCGCTGCTGCTCCTGGCCTTGGGCCTGCAGCTGCCGTaGTCTGGCAGCATTTCCACACTGGCTGTTTCCCCAAAGCTCAGT +
Preference number: 5 (lower is better)
Translates to: AQRALLLLALGLQLP*SGSISTLAVSPKLS
Trigger: ACTGAGCTTTGGGGAAACAGCCAGTGTGGAAATGCTGCCAGAGCACGGCAGCTGCAGGCCCAAGGCCAGGAGCAGCAGCGCACGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS CCA 90 bp TTTAGAGCCTGGAACTGCACACAGGCCTCTCCCTGGGCCCGGAGCTaGCTGACAAGCAGGTATGTGGTGAGTCCTGCAAGGAAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: FRAWNCTQASPWARS*LTSRYVVSPARKGS
Trigger: GCTCCCCTTCCTTGCAGGACTCACCACATACCTGCTTGTCAGCCAGCTCCGGGCCCAGGGAGAGGCCTGTGTGCAGTTCCAGGCTCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCACTTCGCATACAGACTaGGTCCCCATGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPTSHTD*VPMRSW
Trigger: CCAGCTCCTCATGGGGACCAAGTCTGTATGCGAAGT...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCGTTTGGTCGGCCTGCTaGTCTGATTTCACTGCACTC +
Preference number: 5 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPVWSAC*SDFTAL
Trigger: GAGTGCAGTGAAATCAGACAAGCAGGCCGACCAAAC...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS CCA 90 bp GCTACCTACTTCGCATACAGACTTGGTCCCCATGAGGAGCTGGGTTaGCTCAGGGTAGCTGTCTGTTACCTTGGTGATGACCACAGTGAT +
Preference number: 5 (lower is better)
Translates to: ATYFAYRLGPHEELG*LRVAVCYLGDDHSD
Trigger: ATCACTGTGGTCATCACCAAGGTAACAGACAGCTACCCTGAGCCAACCCAGCTCCTCATGGGGACCAAGTCTGTATGCGAAGTAGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCGTGCTGTGTGGGAGTTaGTCTCACAACTGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPVLCGS*SHNWKD
Trigger: GTCTTTCCAGTTGTGAGACAAACTCCCACACAGCAC...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCACGTTCACCATTAGCTaGTCCCCTTCTTGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPTFTIS*SPSCKE
Trigger: CTCCTTGCAAGAAGGGGACAAGCTAATGGTGAACGT...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp CGCAATGACCAGCCTGTCCTCCAGGGAAGGTCTTGGCTAGGCTCATTAGCTAATTTCATAGCTAAACCGTaGTCCCTGTGGAATGCCCCC +
Preference number: 5 (lower is better)
Translates to: RNDQPVLQGRSWLGSLANFIAKP*SLWNAP
Trigger: GGGGGCATTCCACAGGGACAACGGTTTAGCTATGAA...ATTAGCTAATGAGCCTAGCCAAGACCTTCCCTGGAGGACAGGCTGGTCATTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp GGTTTGAGCAGGCCACTCTTCTGTGCAAAACTCCTCCTGCATACCAAAGCTGCTGCATACCAAAGCTGCTaGGTGCTCTCACGCACCATG +
Preference number: 5 (lower is better)
Translates to: GLSRPLFCAKLLLHTKAAAYQSC*VLSRTM
Trigger: CATGGTGCGTGAGAGCACCAAGCAGCTTTGGTATGC...AGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAGAGTGGCCTGCTCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS GCA 90 bp CTTGGTGATGACCACAGTGATGGAGTCTGGCTTGTTTGGTCGGCCTaGTTGTCTGATTTCACTGCACTCAGAGGTCATCCCACGGAATGT +
Preference number: 5 (lower is better)
Translates to: LGDDHSDGVWLVWSA*LSDFTALRGHPTEC
Trigger: ACATTCCGTGGGATGACCTCTGAGTGCAGTGAAATCAGACAAGCAGGCCGACCAAACAAGCCAGACTCCATCACTGTGGTCATCACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS CCA 90 bp AGGGTAGCTGTCTGTTACCTTGGTGATGACCACAGTGATGGAGTCTaGCTTGTTTGGTCGGCCTGCTTGTCTGATTTCACTGCACTCAGA +
Preference number: 5 (lower is better)
Translates to: RVAVCYLGDDHSDGV*LVWSACLSDFTALR
Trigger: TCTGAGTGCAGTGAAATCAGACAAGCAGGCCGACCAAACAAGCCAGACTCCATCACTGTGGTCATCACCAAGGTAACAGACAGCTACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS TCA 90 bp CTGGGATCAGCAGGAATTTGTTGGTATAGTTCATTCGGTTCTTGGTaGAGGCCAGGCCTAGTTCATGTTCCCAGTGCAGAGCTGGGAACT +
Preference number: 5 (lower is better)
Translates to: LGSAGICWYSSFGSW*RPGLVHVPSAELGT
Trigger: AGTTCCCAGCTCTGCACTGGGAACATGAACTAGGCCTGGCCTTCACCAAGAACCGAATGAACTATACCAACAAATTCCTGCTGATCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS TCA 90 bp GTGAAGGCCAGGCCTAGTTCATGTTCCCAGTGCAGAGCTGGGAACTaGTTTTTAAAGTGCTGTGTGGGAGTTTGTCTCACAACTGTCAGG +
Preference number: 5 (lower is better)
Translates to: VKARPSSCSQCRAGN*FLKCCVGVCLTTVR
Trigger: CCTGACAGTTGTGAGACAAACTCCCACACAGCACTTTAAAAATCAGTTCCCAGCTCTGCACTGGGAACATGAACTAGGCCTGGCCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp GGTTTGAGCAGGCCACTCTTCTGTGCAAAACTCCTCCTGCATACCAAAGCTGCTGCGCCTGGCCAAGACTaGGAGTTATTCTTTAGAGTA +
Preference number: 5 (lower is better)
Translates to: GLSRPLFCAKLLLHTKAAAPGQD*ELFFRV
Trigger: TACTCTAAAGAATAACTCCAAGTCTTGGCCAGGCGC...AGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAGAGTGGCCTGCTCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCATCATGGAAACAGAATaGGGTAAGGGCTTGGGAAAA +
Preference number: 5 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPIMETE*GKGLGK
Trigger: TTTTCCCAAGCCCTTACCCAATTCTGTTTCCATGAT...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS TCA 90 bp GTGAAGGCCAGGCCTAGTTCATGTTCCCAGTGCAGAGCTGGGAACTaGTTTTTAAAGTGCTGTGTGGGAGTTTGTCTCACAACTGGAAAG +
Preference number: 5 (lower is better)
Translates to: VKARPSSCSQCRAGN*FLKCCVGVCLTTGK
Trigger: CTTTCCAGTTGTGAGACAAACTCCCACACAGCACTTTAAAAATCAGTTCCCAGCTCTGCACTGGGAACATGAACTAGGCCTGGCCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCGATGAACTAGATAAATaGGCAACTCTGGGGACTTTT +
Preference number: 5 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPDELDK*ATLGTF
Trigger: AAAAGTCCCCAGAGTTGCCAATTTATCTAGTTCATC...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCATTGGAACAAAACACTaGTCTTACAGGCATGAGGTA +
Preference number: 5 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPIGTKH*SYRHEV
Trigger: TACCTCATGCCTGTAAGACAAGTGTTTTGTTCCAAT...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp CCAAATTTCATAGCTAAACCGTTGTCCCTGTGGAATGCCCCCTACTCCCGGCCCCATGGAATAAGTCCATaGTCTCTCAGCATCAAACAA +
Preference number: 5 (lower is better)
Translates to: PNFIAKPLSLWNAPYSRPHGISP*SLSIKQ
Trigger: TTGTTTGATGCTGAGAGACAATGGACTTATTCCATG...GGGCCGGGAGTAGGGGGCATTCCACAGGGACAACGGTTTAGCTATGAAATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS CCA 90 bp CCCACGGAATGTGACCTGGGAGTAAATGAAGTAGTCTCCCGACTCTaGGATCAGCAGGAATTTGTTGGTATAGTTCATTCGGTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: PTECDLGVNEVVSRL*DQQEFVGIVHSVLG
Trigger: ACCAAGAACCGAATGAACTATACCAACAAATTCCTGCTGATCCCAGAGTCGGGAGACTACTTCATTTACTCCCAGGTCACATTCCGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGGTGATGGAGTCTGGCTaGTTTGGTCGGCCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKVMESG*FGRPAC
Trigger: ACAAGCAGGCCGACCAAACAAGCCAGACTCCATCAC...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTGTGATGGAGTCTGGCTaGTTTGGTCGGCCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVVMESG*FGRPAC
Trigger: ACAAGCAGGCCGACCAAACAAGCCAGACTCCATCAC...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp GAAGAGTCCAGGATTATGGTTCAGGAAGACAGCTTCCTAGCTCTAGATCAGCCCTTTCTAGAGCTTTCCTaGGACTTCCTTCAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: EESRIMVQEDSFLALDQPFLELS*DFLQSS
Trigger: GGAGCTTTGAAGGAAGTCCAAGGAAAGCTCTAGAAA...GGGCTGATCTAGAGCTAGGAAGCTGTCTTCCTGAACCATAATCCTGGACTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp GAAACCAGAGTGAGAGTGATTTTGGTGCCAAATTTCCTCTCAGACTCATCCATGACGTTCACCATTAGCTaGTCCCCTTCTTGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: ETRVRVILVPNFLSDSSMTFTIS*SPSCKE
Trigger: CTCCTTGCAAGAAGGGGACAAGCTAATGGTGAACGT...CATGGATGAGTCTGAGAGGAAATTTGGCACCAAAATCACTCTCACTCTGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCGAACAGTGGGCAGGTTaGAGCAGGCCACTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: RNSPILQPILIIYLLSSAEQWAG*SRPLFC
Trigger: ACAGAAGAGTGGCCTGCTCAAACCTGCCCACTGTTC...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp GGTTTGAGCAGGCCACTCTTCTGTGCAAAACTCCTCCTGCATACCAAAGCTGCTTCATGGTCTCTGTATTaGCTGAGGAACACAGATTTT +
Preference number: 5 (lower is better)
Translates to: GLSRPLFCAKLLLHTKAASWSLY*LRNTDF
Trigger: AAAATCTGTGTTCCTCAGCAAATACAGAGACCATGA...AGCAGCTTTGGTATGCAGGAGGAGTTTTGCACAGAAGAGTGGCCTGCTCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp CCAACCTCTGTGAAGAATAGCTTCTACAAAAACCCTTGTGACAAGCCCTTTGTTCCTTGCAAGAGAATGTaGGCAATGGCCGTGCCTTGT +
Preference number: 5 (lower is better)
Translates to: PTSVKNSFYKNPCDKPFVPCKRM*AMAVPC
Trigger: ACAAGGCACGGCCATTGCCAACATTCTCTTGCAAGG...AACAAAGGGCTTGTCACAAGGGTTTTTGTAGAAGCTATTCTTCACAGAGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGGAATTGGGTAAGGGCTaGGGAAAATACCTTGCAAGA +
Preference number: 5 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVELGKG*GKYLAR
Trigger: TCTTGCAAGGTATTTTCCCAAGCCCTTACCCAATTC...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS GCA 90 bp ACGTATGACAAGGCCAGGCACCAGACCCTTCAAATTCCCATTCTTTaGCCCATAAGTGATTGGCTGAACTGTTTTATCCCCATTCATCAA +
Preference number: 5 (lower is better)
Translates to: TYDKARHQTLQIPIL*PISDWLNCFIPIHQ
Trigger: TTGATGAATGGGGATAAAACAGTTCAGCCAATCACTTATGGGGCAAAGAATGGGAATTTGAAGGGTCTGGTGCCTGGCCTTGTCATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCATGGGCTGGAACCAGTaGCTACCTACTTCGCATACA +
Preference number: 5 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVMGWNQ*LPTSHT
Trigger: TGTATGCGAAGTAGGTAGCAACTGGTTCCAGCCCAT...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTCATAGCTAAACCGTaGTCCCTGTGGAATGCCCCC +
Preference number: 5 (lower is better)
Translates to: RNSPILQPILIIYLLSSAFIAKP*SLWNAP
Trigger: GGGGGCATTCCACAGGGACAACGGTTTAGCTATGAA...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp CTCAGCATCAAACAAGTTGGCAGTGTAGTTGATCTAGTTAACCAGGTATCTGTCGGGCAGATTCCTGCTTaGCAGACAAGTCAACAAAGG +
Preference number: 5 (lower is better)
Translates to: LSIKQVGSVVDLVNQVSVGQIPA*QTSQQR
Trigger: CCTTTGTTGACTTGTCTGCAAAGCAGGAATCTGCCC...GACAGATACCTGGTTAACTAGATCAACTACACTGCCAACTTGTTTGATGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS TCA 90 bp CTCCGAGTTGGAGAGAAGCCATTTCTGAATGACTCAGTGTATGAATaGAAGAGAGAGACAGGAGAGAAAGAGAGAGGGCTGATAGAATCT +
Preference number: 5 (lower is better)
Translates to: LRVGEKPFLNDSVYE*KRETGEKERGLIES
Trigger: AGATTCTATCAGCCCTCTCTCTTTCTCTCCTGTCTCTCTCTTTCATTCATACACTGAGTCATTCAGAAATGGCTTCTCTCCAACTCGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS TCA 90 bp ACAGATGAACTAGATAAATTGGCAACTCTGGGGACTTTTTGTTTGTaGCCAGATCCAGAATTACTTGCAGCTCCGAGTTGGAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: TDELDKLATLGTFCL*PDPELLAAPSWREA
Trigger: GGCTTCTCTCCAACTCGGAGCTGCAAGTAATTCTGGATCTGGTCACAAACAAAAAGTCCCCAGAGTTGCCAATTTATCTAGTTCATCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS GCA 90 bp TGCAAGAATTATCCTTTCCCAAATGACTCAGATAAAACTCATCGATaGCTCTCTTGTTTACGTATGACAAGGCCAGGCACCAGACCCTTC +
Preference number: 5 (lower is better)
Translates to: CKNYPFPNDSDKTHR*LSCLRMTRPGTRPF
Trigger: GAAGGGTCTGGTGCCTGGCCTTGTCATACGTAAACAAGAGAGGCATCGATGAGTTTTATCTGAGTCATTTGGGAAAGGATAATTCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCCAGATCCAGAATTACTaGCAGCTCCGAGTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: RNSPILQPILIIYLLSSAQIQNY*QLRVGE
Trigger: CTCTCCAACTCGGAGCTGCAAGTAATTCTGGATCTG...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCATGGGCTGGAACCAGTaGCTACCTACTTCGCATACA +
Preference number: 5 (lower is better)
Translates to: RNSPILQPILIIYLLSSAMGWNQ*LPTSHT
Trigger: TGTATGCGAAGTAGGTAGCAACTGGTTCCAGCCCAT...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGGCGCCTGGCCAAGACTaGGAGTTATTCTTTAGAGTA +
Preference number: 5 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKAPGQD*ELFFRV
Trigger: TACTCTAAAGAATAACTCCAAGTCTTGGCCAGGCGC...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCCTGTCAGGTGTGCCCTaGGCTTATCTCCGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVILSGVP*AYLRLL
Trigger: GAGCAGACGGAGATAAGCCAAGGGCACACCTGACAG...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGGTGCTGTGTGGGAGTTaGTCTCACAACTGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKVLCGS*SHNCQV
Trigger: CACCTGACAGTTGTGAGACAAACTCCCACACAGCAC...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp TCTCCTCCCACTTCCATGTTGTCCTACAGGTGTTTGAAAATACTTGTCCCATCTGAGCTCATTTGCTCCTaGGAAACAAATGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: SPPTSMLSYRCLKILVPSELICS*ETNGQI
Trigger: AATCTGCCCATTTGTTTCCAAGGAGCAAATGAGCTC...AGATGGGACAAGTATTTTCAAACACCTGTAGGACAACATGGAAGTGGGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCACTTCGCATACAGACTaGGTCCCCATGAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVITSHTD*VPMRSW
Trigger: CCAGCTCCTCATGGGGACCAAGTCTGTATGCGAAGT...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGAAGTATGTGGAAAAATaGGTGAAGGATTTTGCCTCT +
Preference number: 5 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVKYVEK*VKDFAS
Trigger: AGAGGCAAAATCCTTCACCAATTTTTCCACATACTT...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGGCTACACTGGACACTTaGCTCAGGAGCCTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLATLDT*LRSLSN
Trigger: ATTTGAGAGGCTCCTGAGCAAAGTGTCCAGTGTAGC...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AATTCTACTTTTAGCATCCAACTAGCTACTGTCTGGCACTGGCCACGAAGGGTGCCTATCAAGCAAGTTTaGGAGTTACTGAGAAATCTT +
Preference number: 5 (lower is better)
Translates to: NSTFSIQLATVWHWPRRVPIKQV*ELLRNL
Trigger: AAGATTTCTCAGTAACTCCAAAACTTGCTTGATAGG...CACCCTTCGTGGCCAGTGCCAGACAGTAGCTAGTTGGATGCTAAAAGTAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCAACTCTGGGGACTTTTaGTTTGTGACCAGATCCAGA +
Preference number: 5 (lower is better)
Translates to: RNSPILQPILIIYLLSSANSGDF*FVTRSR
Trigger: TCTGGATCTGGTCACAAACAAAAAGTCCCCAGAGTT...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCGTTTGGTCGGCCTGCTaGTCTGATTTCACTGCACTC +
Preference number: 5 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIVWSAC*SDFTAL
Trigger: GAGTGCAGTGAAATCAGACAAGCAGGCCGACCAAAC...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGCTAATTACTGAACCCTaGAGAAGGCCTGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKLITEP*RRPARF
Trigger: AAACCTGGCAGGCCTTCTCAAGGGTTCAGTAATTAG...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTGATAACACCAATGTCTaGGGCCACAAGGATATCCCC +
Preference number: 5 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVDNTNV*GHKDIP
Trigger: GGGGATATCCTTGTGGCCCAAGACATTGGTGTTATC...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp TTGCTCTCTTCAGCCTTTTTCCAGTTAGTACTCTCATCAGTAAGGCACATGAAGATGAAGTGTGAAATTTaGGGCCCCAAATTTCATAGC +
Preference number: 5 (lower is better)
Translates to: LLSSAFFQLVLSSVRHMKMKCEI*GPKFHS
Trigger: GCTATGAAATTTGGGGCCCAAAATTTCACACTTCAT...CTTCATGTGCCTTACTGATGAGAGTACTAACTGGAAAAAGGCTGAAGAGAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCAGAGTGAGAGTGATTTaGGTGCCAAATTTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: RNSPILQPILIIYLLSSARVRVI*VPNFLS
Trigger: TGAGAGGAAATTTGGCACCAAAATCACTCTCACTCT...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp GAGATTAGAATTCATACACTAGTACCCAAAGACATGGGATGCATACCAGTTAAGGATCTTAGGGGTATTTaGTGTTGGACACTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: EIRIHTLVPKDMGCIPVKDLRGI*CWTLSG
Trigger: TCCAGAGAGTGTCCAACACAAAATACCCCTAAGATC...CTTAACTGGTATGCATCCCATGTCTTTGGGTACTAGTGTATGAATTCTAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AGAAACTCGCCAATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCCATGACATTTCTCTATaGGCCAAGATCTTAGGGGTA +
Preference number: 5 (lower is better)
Translates to: RNSPILQPILIIYLLSSAHDISL*AKILGV
Trigger: TACCCCTAAGATCTTGGCCAATAGAGAAATGTCATG...GGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATTGGCGAGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AAGTGCTGCCACGTGACAGATGCTCAAAACAAAAATGATTTACGAATGAAGTTGTATGGAGATAATGCCTaGGGAACAGAAGTTCTGACA +
Preference number: 5 (lower is better)
Translates to: KCCHVTDAQNKNDLRMKLYGDNA*GTEVLT
Trigger: TGTCAGAACTTCTGTTCCCAAGGCATTATCTCCATA...CAACTTCATTCGTAAATCATTTTTGTTTTGAGCATCTGTCACGTGGCAGCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCATTTCTGCACTAGACTaGGAAAGTTGGCCAACTGGT +
Preference number: 5 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIISALD*ESWPTG
Trigger: ACCAGTTGGCCAACTTTCCAAGTCTAGTGCAGAAAT...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCTTTCTAGAGCTTTCCTaGGACTTCCTTCAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIFLELS*DFLQSS
Trigger: GGAGCTTTGAAGGAAGTCCAAGGAAAGCTCTAGAAA...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS-3UTR CAA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTTGTCCTAGGAATTGGTaGAGGGAATATTCTCCTATC +
Preference number: 5 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVCPRNW*REYSPI
Trigger: GATAGGAGAATATTCCCTCAACCAATTCCTAGGACA...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTTTTAGTTACATCATCTaGAACAGGGCACAGATGAAC +
Preference number: 5 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVFSYII*NRAQMN
Trigger: GTTCATCTGTGCCCTGTTCAAGATGATGTAACTAAA...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCTTGTCCTACAGGTGTTaGAAAATACTTGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVILSYRC*KILVPS
Trigger: AGATGGGACAAGTATTTTCAAACACCTGTAGGACAA...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTGATTTACGAATGAAGTaGAAAGACTGCTGGGCTTAT +
Preference number: 5 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVDLRMK*KDCWAY
Trigger: ATAAGCCCAGCAGTCTTTCAACTTCATTCGTAAATC...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AATCCTCCAACCCATCTTAATAATATATTTGCTCTCTTCAGCCTTTTTCCAGTTAGCTACTTTATTTACTaGGCACTGTGTGTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: NPPTHLNNIFALFSLFPVSYFIY*ALCVLF
Trigger: GAACAAGACACACAGTGCCAAGTAAATAAAGTAGCT...AACTGGAAAAAGGCTGAAGAGAGCAAATATATTATTAAGATGGGTTGGAGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS-3UTR CAA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCGGATTAATTTTCTCATaGGGAAACTGTAGACTTTGC +
Preference number: 5 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIGLIFS*GNCRLC
Trigger: GCAAAGTCTACAGTTTCCCAATGAGAAAATTAATCC...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS-3UTR CAA 90 bp AAATATTTCTCTTTCAATCCTGACCCGAGTAGATCATCCATTCATTTAGTGATCAAGTATGTGGAAAAATaGGTGAAGGATTTTGCCTCT +
Preference number: 5 (lower is better)
Translates to: KYFSFNPDPSRSSIHLVIKYVEK*VKDFAS
Trigger: AGAGGCAAAATCCTTCACCAATTTTTCCACATACTT...GATCACTAAATGAATGGATGATCTACTCGGGTCAGGATTGAAAGAGAAATATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS CCA 72 bp TGGAACTGCACACAGGCCTCTCCCTGGGCCCGGAGCTaGCTGACAAGCAGGTATGTGGTGAGTCCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: WNCTQASPWARS*LTSRYVVSPAR
Trigger: CCTTGCAGGACTCACCACATACCTGCTTGTCAGCCAGCTCCGGGCCCAGGGAGAGGCCTGTGTGCAGTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374045.5
CDS CCA 72 bp TTCGCATACAGACTTGGTCCCCATGAGGAGCTGGGTTaGCTCAGGGTAGCTGTCTGTTACCTTGGTGATGAC +
Preference number: 6 (lower is better)
Translates to: FAYRLGPHEELG*LRVAVCYLGDD
Trigger: GTCATCACCAAGGTAACAGACAGCTACCCTGAGCCAACCCAGCTCCTCATGGGGACCAAGTCTGTATGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS CCA 72 bp CCCCTTCTTGCAAGGAGAACATGGCTCCGAGGTAGATaGGCTGGAACCAGTTGCTACCTACTTCGCATACAG +
Preference number: 6 (lower is better)
Translates to: PLLARRTWLRGR*AGTSCYLLRIQ
Trigger: CTGTATGCGAAGTAGGTAGCAACTGGTTCCAGCCCATCTACCTCGGAGCCATGTTCTCCTTGCAAGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS CAA 72 bp CACAGTGATGGAGTCTGGCTTGTTTGGTCGGCCTGCTaGTCTGATTTCACTGCACTCAGAGGTCATCCCACG +
Preference number: 6 (lower is better)
Translates to: HSDGVWLVWSAC*SDFTALRGHPT
Trigger: CGTGGGATGACCTCTGAGTGCAGTGAAATCAGACAAGCAGGCCGACCAAACAAGCCAGACTCCATCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS CAA 90 bp GGTGATGACCACAGTGATGGAGTCTGGCTTGTTTGGTCGGCCTGCTaGTCTGATTTCACTGCACTCAGAGGTCATCCCACGGAATGTGAC +
Preference number: 6 (lower is better)
Translates to: GDDHSDGVWLVWSAC*SDFTALRGHPTECD
Trigger: GTCACATTCCGTGGGATGACCTCTGAGTGCAGTGAAATCAGACAAGCAGGCCGACCAAACAAGCCAGACTCCATCACTGTGGTCATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS TCA 72 bp AGTTGCTACCTACTTCGCATACAGACTTGGTCCCCATaGGGAGCTGGGTTGGCTCAGGGTAGCTGTCTGTTA +
Preference number: 6 (lower is better)
Translates to: SCYLLRIQTWSP*GAGLAQGSCLL
Trigger: TAACAGACAGCTACCCTGAGCCAACCCAGCTCCTCATGGGGACCAAGTCTGTATGCGAAGTAGGTAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS CCA 72 bp TCACCATTAGCTTGTCCCCTTCTTGCAAGGAGAACATaGCTCCGAGGTAGATGGGCTGGAACCAGTTGCTAC +
Preference number: 6 (lower is better)
Translates to: SPLACPLLARRT*LRGRWAGTSCY
Trigger: GTAGCAACTGGTTCCAGCCCATCTACCTCGGAGCCATGTTCTCCTTGCAAGAAGGGGACAAGCTAATGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS CAA 72 bp GTTACCTTGGTGATGACCACAGTGATGGAGTCTGGCTaGTTTGGTCGGCCTGCTTGTCTGATTTCACTGCAC +
Preference number: 6 (lower is better)
Translates to: VTLVMTTVMESG*FGRPACLISLH
Trigger: GTGCAGTGAAATCAGACAAGCAGGCCGACCAAACAAGCCAGACTCCATCACTGTGGTCATCACCAAGGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS CAA 72 bp TCCACCAAAGAGATGTCACTGACGTTCACCATTAGCTaGTCCCCTTCTTGCAAGGAGAACATGGCTCCGAGG +
Preference number: 6 (lower is better)
Translates to: STKEMSLTFTIS*SPSCKENMAPR
Trigger: CCTCGGAGCCATGTTCTCCTTGCAAGAAGGGGACAAGCTAATGGTGAACGTCAGTGACATCTCTTTGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS GCA 72 bp AAGGCCAGGCACCAGACCCTTCAAATTCCCATTCTTTaGCCCATAAGTGATTGGCTGAACTGTTTTATCCCC +
Preference number: 6 (lower is better)
Translates to: KARHQTLQIPIL*PISDWLNCFIP
Trigger: GGGGATAAAACAGTTCAGCCAATCACTTATGGGGCAAAGAATGGGAATTTGAAGGGTCTGGTGCCTGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS CAA 90 bp TGGCAACTCTGGGGACTTTTTGTTTGTGACCAGATCCAGAATTACTaGCAGCTCCGAGTTGGAGAGAAGCCATTTCTGAATGACTCAGTG +
Preference number: 6 (lower is better)
Translates to: WQLWGLFVCDQIQNY*QLRVGEKPFLNDSV
Trigger: CACTGAGTCATTCAGAAATGGCTTCTCTCCAACTCGGAGCTGCAAGTAATTCTGGATCTGGTCACAAACAAAAAGTCCCCAGAGTTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS TCA 72 bp CAGATAAAACTCATCGATGCCTCTCTTGTTTACGTATaGCAAGGCCAGGCACCAGACCCTTCAAATTCCCAT +
Preference number: 6 (lower is better)
Translates to: QIKLIDASLVYV*QGQAPDPSNSH
Trigger: ATGGGAATTTGAAGGGTCTGGTGCCTGGCCTTGTCATACGTAAACAAGAGAGGCATCGATGAGTTTTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS CCA 72 bp TGTGACCTGGGAGTAAATGAAGTAGTCTCCCGACTCTaGGATCAGCAGGAATTTGTTGGTATAGTTCATTCG +
Preference number: 6 (lower is better)
Translates to: CDLGVNEVVSRL*DQQEFVGIVHS
Trigger: CGAATGAACTATACCAACAAATTCCTGCTGATCCCAGAGTCGGGAGACTACTTCATTTACTCCCAGGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS TCA 72 bp CTAGATAAATTGGCAACTCTGGGGACTTTTTGTTTGTaGCCAGATCCAGAATTACTTGCAGCTCCGAGTTGG +
Preference number: 6 (lower is better)
Translates to: LDKLATLGTFCL*PDPELLAAPSW
Trigger: CCAACTCGGAGCTGCAAGTAATTCTGGATCTGGTCACAAACAAAAAGTCCCCAGAGTTGCCAATTTATCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS GCA 72 bp TATCCTTTCCCAAATGACTCAGATAAAACTCATCGATaGCTCTCTTGTTTACGTATGACAAGGCCAGGCACC +
Preference number: 6 (lower is better)
Translates to: YPFPNDSDKTHR*LSCLRMTRPGT
Trigger: GGTGCCTGGCCTTGTCATACGTAAACAAGAGAGGCATCGATGAGTTTTATCTGAGTCATTTGGGAAAGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS CAA 72 bp TGGGGACTTTTTGTTTGTGACCAGATCCAGAATTACTaGCAGCTCCGAGTTGGAGAGAAGCCATTTCTGAAT +
Preference number: 6 (lower is better)
Translates to: WGLFVCDQIQNY*QLRVGEKPFLN
Trigger: ATTCAGAAATGGCTTCTCTCCAACTCGGAGCTGCAAGTAATTCTGGATCTGGTCACAAACAAAAAGTCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS TCA 72 bp ATTACTTGCAGCTCCGAGTTGGAGAGAAGCCATTTCTaGATGACTCAGTGTATGAATGAAAGAGAGAGACAG +
Preference number: 6 (lower is better)
Translates to: ITCSSELERSHF*MTQCMNERERQ
Trigger: CTGTCTCTCTCTTTCATTCATACACTGAGTCATTCAGAAATGGCTTCTCTCCAACTCGGAGCTGCAAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS GCA 72 bp GAACTCGGTGGCAGAGGACTTTCATATAATGATATTTaGTCTCCTCCTATAGTAAGAAGGCTCCAAAGAAGG +
Preference number: 6 (lower is better)
Translates to: ELGGRGLSYNDI*SPPIVRRLQRR
Trigger: CCTTCTTTGGAGCCTTCTTACTATAGGAGGAGAGCAAATATCATTATATGAAAGTCCTCTGCCACCGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374044.1
ENST00000374045.5
CDS CCA 72 bp GAGGTGCCTTGGATTTCTGCACTAGACTTGGAAAGTTaGCCAACTGGTGATAGTATGGAATTTCTCTTGATT +
Preference number: 6 (lower is better)
Translates to: EVPWISALDLES*PTGDSMEFLLI
Trigger: AATCAAGAGAAATTCCATACTATCACCAGTTGGCCAACTTTCCAAGTCTAGTGCAGAAATCCAAGGCACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS CAA 90 bp TATAGGAACTCTAGGTGTGAGGTGCCTTGGATTTCTGCACTAGACTaGGAAAGTTGGCCAACTGGTGATAGTATGGAATTTCTCTTGATT +
Preference number: 6 (lower is better)
Translates to: YRNSRCEVPWISALD*ESWPTGDSMEFLLI
Trigger: AATCAAGAGAAATTCCATACTATCACCAGTTGGCCAACTTTCCAAGTCTAGTGCAGAAATCCAAGGCACCTCACACCTAGAGTTCCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS GCA 72 bp TCCCCCTATTCTTCTGTGTTTAGGAAAATGGCTTGCTaGAAGAATTATCCTTTCCCAAATGACTCAGATAAA +
Preference number: 6 (lower is better)
Translates to: SPYSSVFRKMAC*KNYPFPNDSDK
Trigger: TTTATCTGAGTCATTTGGGAAAGGATAATTCTTGCAGCAAGCCATTTTCCTAAACACAGAAGAATAGGGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS CCA 72 bp TTAAGGAATCCCCCTATTCTTCTGTGTTTAGGAAAATaGCTTGCTGCAAGAATTATCCTTTCCCAAATGACT +
Preference number: 6 (lower is better)
Translates to: LRNPPILLCLGK*LAARIILSQMT
Trigger: AGTCATTTGGGAAAGGATAATTCTTGCAGCAAGCCATTTTCCTAAACACAGAAGAATAGGGGGATTCCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1
CDS TCA 72 bp TTAATTTTACCTGAGACCTATGATCCTGGAGAACAATaGAGGTTAAGGAATCCCCCTATTCTTCTGTGTTTA +
Preference number: 6 (lower is better)
Translates to: LILPETYDPGEQ*RLRNPPILLCL
Trigger: TAAACACAGAAGAATAGGGGGATTCCTTAACCTTCATTGTTCTCCAGGATCATAGGTCTCAGGTAAAATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374044.1