RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFRSF9 (Homo sapiens)

Ensembl gene IDs: ENSG00000049249

Ensembl transcript IDs: ENST00000377507.8, ENST00000474475.1, ENST00000492571.1, ENST00000615230.4, ENST00000674210.1

Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCGGGGTCACAGAGGATGCTCCCGGAGAGAGGTCGGCTGGAGATaGTCCACAGACCACGTCCCTCTCCTTCGTCCCATTCACAAGCAC +
Preference number: 1 (lower is better)
Translates to: RRGHRGCSRREVGWR*STDHVPLLRPIHKH
Trigger: GTGCTTGTGAATGGGACGAAGGAGAGGGACGTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCGGGAGCATCCTCTGTGACCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492571.1
3UTR TCA 90 bp ACAGAACAGGGAGCCCAGAAGCAGACCCATGGCCCTATGGAAACTTaGTGGATGGTAGGTGAGATTGCAGACCCGCAGGAGAAAGACGAC +
Preference number: 1 (lower is better)
Translates to: TEQGAQKQTHGPMET*WMVGEIADPQEKDD
Trigger: GTCGTCTTTCTCCTGCGGGTCTGCAATCTCACCTACCATCCATCAAGTTTCCATAGGGCCATGGGTCTGCTTCTGGGCTCCCTGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR GCA 90 bp AAAGATCACTCTCCAAGTCCTACCACACACAGGGCACATGTAACCTaGCCTAGCTGCGGTGGGCACCTCTCACCCACAGATGGAAACATC +
Preference number: 1 (lower is better)
Translates to: KDHSPSPTTHRAHVT*PSCGGHLSPTDGNI
Trigger: GATGTTTCCATCTGTGGGTGAGAGGTGCCCACCGCAGCTAGGGCAGGTTACATGTGCCCTGTGTGTGGTAGGACTTGGAGAGTGATCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR GCA 90 bp GCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTaGACCAGGTTTGGCCATGGGAGTTTGGCGGCCCCCACTCTAGTG +
Preference number: 1 (lower is better)
Translates to: ARLSQANQQTNKGKW*TRFGHGSLAAPTLV
Trigger: CACTAGAGTGGGGGCCGCCAAACTCCCATGGCCAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CCA 90 bp TCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTaGCCATGGGAGTTTGGCGGCCCCCACTCTAGTGCTGTGGTAGGA +
Preference number: 1 (lower is better)
Translates to: SSKPTDKQRQMVHQV*PWEFGGPHSSAVVG
Trigger: TCCTACCACAGCACTAGAGTGGGGGCCGCCAAACTCCCATGGCCAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CCA 90 bp AGAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATaGTGCACCAGGTTTGGCCATGGGAGTTTGGCGGCCCCCACTCTA +
Preference number: 1 (lower is better)
Translates to: RARLSQANQQTNKGK*CTRFGHGSLAAPTL
Trigger: TAGAGTGGGGGCCGCCAAACTCCCATGGCCAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR GCA 90 bp CCTAAATCCCAGAGTAAAATAACATGGGACAGAGGCACGCAAGCTTaGAATAGGCATGTCATACAAAAGTGTAAGAAATGGCCAGGCATG +
Preference number: 1 (lower is better)
Translates to: PKSQSKITWDRGTQA*NRHVIQKCKKWPGM
Trigger: CATGCCTGGCCATTTCTTACACTTTTGTATGACATGCCTATTGCAAGCTTGCGTGCCTCTGTCCCATGTTATTTTACTCTGGGATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR TCA 90 bp CCAATCATAGCTCTAGTTTCAATTCAGCAGCACTTATTTTCGTCTTaGGGGTTACTGAGATTCGAGATCCGATGGTTTCCTTGGAATGCA +
Preference number: 1 (lower is better)
Translates to: PIIALVSIQQHLFSS*GLLRFEIRWFPWNA
Trigger: TGCATTCCAAGGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAAAATAAGTGCTGCTGAATTGAAACTAGAGCTATGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474475.1
3UTR TCA 90 bp CATGACACTTATATGACTGACGGGAGTACATTAGAACAGCCACTTTaGAAAGCAATTTGGTACTGCAGTAGACTATTGTTCAGAAATATC +
Preference number: 1 (lower is better)
Translates to: HDTYMTDGSTLEQPL*KAIWYCSRLLFRNI
Trigger: GATATTTCTGAACAATAGTCTACTGCAGTACCAAATTGCTTTTCAAAGTGGCTGTTCTAATGTACTCCCGTCAGTCATATAAGTGTCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR GCA 90 bp GCAAGAAAGAAGGAGATGATCTGCGGAGAGTGTCCTGGCTCTCTCGCAGGGGCACGGGGTCACAGAGGATaGTCCCGGAGAGAGGTCGGC +
Preference number: 2 (lower is better)
Translates to: ARKKEMICGECPGSLAGARGHRG*SRREVG
Trigger: GCCGACCTCTCTCCGGGAGCATCCTCTGTGACCCCG...TGCCCCTGCGAGAGAGCCAGGACACTCTCCGCAGATCATCTCCTTCTTTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492571.1
3UTR-3UTR CCA 90 bp AAACGGAGCGTGAGGAAGAACAGCAGGAAGAGCAACGCAGTCGACGTCAGCGCACGGAGAGAGGTCGGCTaGAGATGGTCCACAGACCAC +
Preference number: 2 (lower is better)
Translates to: KRSVRKNSRKSNAVDVSARREVG*RWSTDH
Trigger: GTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCG...TGCGCTGACGTCGACTGCGTTGCTCTTCCTGCTGTTCTTCCTCACGCTCCGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492571.1
3UTR-3UTR TCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGGGCAGGAGGATCACTTaGGCTCCCAGAGGTCAAGGC +
Preference number: 2 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLGRRIT*APRGQG
Trigger: GCCTTGACCTCTGGGAGCTCAAGTGATCCTCCTGCC...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR TCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACGGCAGGAGGATCACTTaGGCTCCCAGAGGTCAAGGC +
Preference number: 2 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYGRRIT*APRGQG
Trigger: GCCTTGACCTCTGGGAGCTCAAGTGATCCTCCTGCC...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACATGGTGCACCAGGTTTaGCCATGGGAGTTTGGCGGC +
Preference number: 2 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYMVHQV*PWEFGG
Trigger: GCCGCCAAACTCCCATGGCCAAACCTGGTGCACCAT...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR TCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACCTGAGGTCAGGAGTTTaGGACCAGCCTGGACAACAT +
Preference number: 2 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYLRSGV*DQPGQH
Trigger: ATGTTGTCCAGGCTGGTCTCAAACTCCTGACCTCAG...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR GCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACTTCAAGCGATTCTTCTaGCACAGCCTCTGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYFKRFF*HSLWSS
Trigger: GCTGCTCCAGAGGCTGTGGCAGAAGAATCGCTTGAA...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR GCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACAGGTGTGAGCTACCGTaGCTGGCCACAAAGAAGATA +
Preference number: 2 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYRCELP*LATKKI
Trigger: TATCTTCTTTGTGGCCAGGCACGGTAGCTCACACCT...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR TCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACGCATGTCGTGTTACATaGCAGAACCCACGGAAACTT +
Preference number: 2 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYACRVT*QNPRKL
Trigger: AAGTTTCCGTGGGTTCTGTCATGTAACACGACATGC...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACGTGTTGGGGGAATCCTaGGTATTATGTAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYVLGES*VLCRMV
Trigger: CACCATCCTACATAATACCCAGGATTCCCCCAACAC...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGGTAATCCCAGCACTTTaGGAGGCCAAAGTGAACCTA +
Preference number: 2 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLVIPAL*EAKVNL
Trigger: TAGGTTCACTTTGGCCTCCCAAAGTGCTGGGATTAC...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR TCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAAGCTGTGATAGCGGATaGCTCATATTTCCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPSCDSG*LIFPCF
Trigger: GAAGCAAGGAAATATGAGTCATCCGCTATCACAGCT...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR TCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCGAAACTGGGAGGCGGTaGTCCAAGATTGTACCACTG +
Preference number: 2 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSETGRR*SKIVPL
Trigger: CAGTGGTACAATCTTGGATCACCGCCTCCCAGTTTC...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR TCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCCTGAGGTCAGGAGTTTaGGACCAGCCTGGACAACAT +
Preference number: 2 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSLRSGV*DQPGQH
Trigger: ATGTTGTCCAGGCTGGTCTCAAACTCCTGACCTCAG...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR GCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCCAGGCATGCCAGGTTTaGACCTGTAATCCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSQACQV*TCNPSY
Trigger: GTAGCTGGGATTACAGGTGCAAACCTGGCATGCCTG...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR GCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACAGAGGCACGCAAGCTTaGAATAGGCATGTCATACAA +
Preference number: 2 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYRGTQA*NRHVIQ
Trigger: TTGTATGACATGCCTATTGCAAGCTTGCGTGCCTCT...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCTGCCCTATTGATGCCTaGCTTGGCTGCAGGATTTGC +
Preference number: 2 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSCPIDA*LGCRIC
Trigger: GCAAATCCTGCAGCCAAGCCAGGCATCAATAGGGCA...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACGTGAGCTACCGTGCCTaGCCACAAAGAAGATATTTT +
Preference number: 2 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYVSYRA*PQRRYF
Trigger: AAAATATCTTCTTTGTGGCCAGGCACGGTAGCTCAC...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCGCAATTCCAGCACTTTaGAAGGCTGAGGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSAIPAL*KAEVGG
Trigger: TCCTCCCACCTCAGCCTTCCAAAGTGCTGGAATTGC...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CAA 90 bp GAACGTGTGTTGGGGGAATCCTGGGTATTATGTAGGATGGTGTTCTaGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: ERVLGESWVLCRMVF*LLKAVIADDSYFLA
Trigger: AGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCCCAACACACGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR TCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGGCCTGTACAACATGGTaGAATGCCATCTTTACCAAA +
Preference number: 2 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLACTTW*NAIFTK
Trigger: TTTGGTAAAGATGGCATTTCACCATGTTGTACAGGC...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCGGGGTTTCACCATGTTaGCCAGGCTGTCTCAAAACT +
Preference number: 2 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSGVSPC*PGCLKT
Trigger: AGTTTTGAGACAGCCTGGCCAACATGGTGAAACCCC...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CAA 90 bp CCCAATCATAGCTCTAGTTTCAATTCAGCAGCACTTATTTTCGTCTaGAGGGTTACTGAGATTCGAGATCCGATGGTTTCCTTGGAATGC +
Preference number: 2 (lower is better)
Translates to: PNHSSSFNSAALIFV*RVTEIRDPMVSLEC
Trigger: GCATTCCAAGGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAAAATAAGTGCTGCTGAATTGAAACTAGAGCTATGATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474475.1
3UTR-3UTR TCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACTTAGAACAGCCACTTTaGAAAGCAATTTGGTACTGC +
Preference number: 2 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYLEQPL*KAIWYC
Trigger: GCAGTACCAAATTGCTTTTCAAAGTGGCTGTTCTAA...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACGCTTTGCCTACTATTTaGCAAGAATTGTACAGCCAA +
Preference number: 2 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYALPTI*QELYSQ
Trigger: TTGGCTGTACAATTCTTGCCAAATAGTAGGCAAAGC...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CAA 90 bp GTGTTGGGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTaGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: VLGESWVLCRMVFLL*KAVIADDSYFLASF
Trigger: AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCCCAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCTCATTCTATACCCACTaGCTTGGCAAAATTAAGGGC +
Preference number: 2 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSSFYTH*LGKIKG
Trigger: GCCCTTAATTTTGCCAAGCCAGTGGGTATAGAATGA...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR GCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCAGGCACATGCCACCATaGCTGACTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSRHMPP*LTNFCI
Trigger: AATACAAAAATTAGTCAGGCATGGTGGCATGTGCCT...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCACTTACTGCACCTCGTaGCTTATTGTCATATGTCAT +
Preference number: 2 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSTYCTS*LIVICH
Trigger: ATGACATATGACAATAAGCCACGAGGTGCAGTAAGT...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CCA 72 bp CGGGGTCACAGAGGATGCTCCCGGAGAGAGGTCGGCTaGAGATGGTCCACAGACCACGTCCCTCTCCTTCGT +
Preference number: 3 (lower is better)
Translates to: RGHRGCSRREVG*RWSTDHVPLLR
Trigger: ACGAAGGAGAGGGACGTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCGGGAGCATCCTCTGTGACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492571.1
3UTR GCA 72 bp TCTCCAAGTCCTACCACACACAGGGCACATGTAACCTaGCCTAGCTGCGGTGGGCACCTCTCACCCACAGAT +
Preference number: 3 (lower is better)
Translates to: SPSPTTHRAHVT*PSCGGHLSPTD
Trigger: ATCTGTGGGTGAGAGGTGCCCACCGCAGCTAGGGCAGGTTACATGTGCCCTGTGTGTGGTAGGACTTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR TCA 72 bp GGAGCCCAGAAGCAGACCCATGGCCCTATGGAAACTTaGTGGATGGTAGGTGAGATTGCAGACCCGCAGGAG +
Preference number: 3 (lower is better)
Translates to: GAQKQTHGPMET*WMVGEIADPQE
Trigger: CTCCTGCGGGTCTGCAATCTCACCTACCATCCATCAAGTTTCCATAGGGCCATGGGTCTGCTTCTGGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CCA 72 bp GACAAACAAAGGCAAATGGTGCACCAGGTTTGGCCATaGGAGTTTGGCGGCCCCCACTCTAGTGCTGTGGTA +
Preference number: 3 (lower is better)
Translates to: DKQRQMVHQVWP*EFGGPHSSAVV
Trigger: TACCACAGCACTAGAGTGGGGGCCGCCAAACTCCCATGGCCAAACCTGGTGCACCATTTGCCTTTGTTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CCA 72 bp CCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTaGCCATGGGAGTTTGGCGGCCCCCACTCTAGTGCT +
Preference number: 3 (lower is better)
Translates to: PTDKQRQMVHQV*PWEFGGPHSSA
Trigger: AGCACTAGAGTGGGGGCCGCCAAACTCCCATGGCCAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CCA 72 bp CTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATaGTGCACCAGGTTTGGCCATGGGAGTTTGGCGGCC +
Preference number: 3 (lower is better)
Translates to: LSQANQQTNKGK*CTRFGHGSLAA
Trigger: GGCCGCCAAACTCCCATGGCCAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACAGGCAGGAGGATCACTaGAGCTCCCAGAGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYRQEDH*SSQRSR
Trigger: CCTTGACCTCTGGGAGCTCAAGTGATCCTCCTGCCT...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CCA 72 bp AGGAGCAGAAGTGACAGATACCCATTTGCCATGCGATaGCCAATGTTCCAAATAGAAGCTGCTCCCTCCACC +
Preference number: 3 (lower is better)
Translates to: RSRSDRYPFAMR*PMFQIEAAPST
Trigger: GGTGGAGGGAGCAGCTTCTATTTGGAACATTGGCCATCGCATGGCAAATGGGTATCTGTCACTTCTGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CCA 72 bp GAGCCTCGCTCCATTATCTTGGATACCCCAACCCTGTaGGGCATGACCAGTCTCTTTCTGTTTGTGGATAGT +
Preference number: 3 (lower is better)
Translates to: EPRSIILDTPTL*GMTSLFLFVDS
Trigger: ACTATCCACAAACAGAAAGAGACTGGTCATGCCCCACAGGGTTGGGGTATCCAAGATAATGGAGCGAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR TCA 72 bp GCTCCATTATCTTGGATACCCCAACCCTGTGGGGCATaGCCAGTCTCTTTCTGTTTGTGGATAGTCAGCAGT +
Preference number: 3 (lower is better)
Translates to: APLSWIPQPCGA*PVSFCLWIVSS
Trigger: ACTGCTGACTATCCACAAACAGAAAGAGACTGGTCATGCCCCACAGGGTTGGGGTATCCAAGATAATGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR GCA 72 bp CACCCACAGATGGAAACATCTTCCTGTGGGGGAAGATaGCCACTTTATAGTCATCCGCCCCTCACATCAAAA +
Preference number: 3 (lower is better)
Translates to: HPQMETSSCGGR*PLYSHPPLTSK
Trigger: TTTTGATGTGAGGGGCGGATGACTATAAAGTGGGCATCTTCCCCCACAGGAAGATGTTTCCATCTGTGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCTTTGGCCATGGGAGTTaGGCGGCCCCCACTCTAGTG +
Preference number: 3 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSFGHGS*AAPTLV
Trigger: CACTAGAGTGGGGGCCGCCAAACTCCCATGGCCAAA...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR GCA 72 bp TTGAATACATGGCGCAGGGACCAGTGGTTACCTACATaGAAGACATGGAATTGGATCACTACCTCCCAACAG +
Preference number: 3 (lower is better)
Translates to: LNTWRRDQWLPT*KTWNWITTSQQ
Trigger: CTGTTGGGAGGTAGTGATCCAATTCCATGTCTTGCATGTAGGTAACCACTGGTCCCTGCGCCATGTATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CCA 72 bp AGGGACCAGTGGTTACCTACATGCAAGACATGGAATTaGATCACTACCTCCCAACAGGCACAAAAGCCAGTT +
Preference number: 3 (lower is better)
Translates to: RDQWLPTCKTWN*ITTSQQAQKPV
Trigger: AACTGGCTTTTGTGCCTGTTGGGAGGTAGTGATCCAATTCCATGTCTTGCATGTAGGTAACCACTGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACTACTTTTCTGCCCTATaGATGCCTGGCTTGGCTGCA +
Preference number: 3 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYYFSAL*MPGLAA
Trigger: TGCAGCCAAGCCAGGCATCAATAGGGCAGAAAAGTA...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCAGGCAGGAGGATCACTaGAGCTCCCAGAGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFRQEDH*SSQRSR
Trigger: CCTTGACCTCTGGGAGCTCAAGTGATCCTCCTGCCT...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACAGTGAACCTAGGAGTTaGAGACCAGCCTGTACAACA +
Preference number: 3 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYSEPRS*RPACTT
Trigger: TGTTGTACAGGCTGGTCTCAAACTCCTAGGTTCACT...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCTGGGGTTTCACCATGTaGGCCAGGCTGTCTCAAAAC +
Preference number: 3 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSWGFTM*ARLSQN
Trigger: GTTTTGAGACAGCCTGGCCAACATGGTGAAACCCCA...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGATGGTGTTCTTGCTTTaGAAAGCTGTGATAGCGGAT +
Preference number: 3 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLMVFLL*KAVIAD
Trigger: ATCCGCTATCACAGCTTTCAAAAGCAAGAACACCAT...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGCACCTCGTGGCTTATaGTCATATGTCATATTAGCA +
Preference number: 3 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPAPRGL*SYVILA
Trigger: TGCTAATATGACATATGACAATAAGCCACGAGGTGC...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACCACAGGATAGACAAATaGACAATGGAACAGAACAGG +
Preference number: 3 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYHRIDK*TMEQNR
Trigger: CCTGTTCTGTTCCATTGTCAATTTGTCTATCCTGTG...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR TCA 72 bp CAATTCAGCAGCACTTATTTTCGTCTTGAGGGTTACTaGGATTCGAGATCCGATGGTTTCCTTGGAATGCAG +
Preference number: 3 (lower is better)
Translates to: QFSSTYFRLEGY*DSRSDGFLGMQ
Trigger: CTGCATTCCAAGGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAAAATAAGTGCTGCTGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474475.1
3UTR CCA 72 bp AGGCCAACTCATTGGCATTTAGAAAAGAACGTGTGTTaGGGGAATCCTGGGTATTATGTAGGATGGTGTTCT +
Preference number: 3 (lower is better)
Translates to: RPTHWHLEKNVC*GNPGYYVGWCS
Trigger: AGAACACCATCCTACATAATACCCAGGATTCCCCCAACACACGTTCTTTTCTAAATGCCAATGAGTTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACTGTAGGATGGTGTTCTaGCTTTTGAAAGCTGTGATA +
Preference number: 3 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYCRMVF*LLKAVI
Trigger: TATCACAGCTTTCAAAAGCAAGAACACCATCCTACA...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCAGTGAACCTAGGAGTTaGAGACCAGCCTGTACAACA +
Preference number: 3 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSSEPRS*RPACTT
Trigger: TGTTGTACAGGCTGGTCTCAAACTCCTAGGTTCACT...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACTTCCTAAGCTTTGCTTaGCCTACTATTTGGCAAGAA +
Preference number: 3 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYFLSFA*PTIWQE
Trigger: TTCTTGCCAAATAGTAGGCAAAGCAAAGCTTAGGAA...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR TCA 72 bp GCTCTAGTTTCAATTCAGCAGCACTTATTTTCGTCTTaGGGGTTACTGAGATTCGAGATCCGATGGTTTCCT +
Preference number: 3 (lower is better)
Translates to: ALVSIQQHLFSS*GLLRFEIRWFP
Trigger: AGGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAAAATAAGTGCTGCTGAATTGAAACTAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474475.1
3UTR-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACTTAAAGGCCAACTCATaGGCATTTAGAAAAGAACGT +
Preference number: 3 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYLKANS*AFRKER
Trigger: ACGTTCTTTTCTAAATGCCAATGAGTTGGCCTTTAA...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR GCA 72 bp CAGAGTAAAATAACATGGGACAGAGGCACGCAAGCTTaGAATAGGCATGTCATACAAAAGTGTAAGAAATGG +
Preference number: 3 (lower is better)
Translates to: QSKITWDRGTQA*NRHVIQKCKKW
Trigger: CCATTTCTTACACTTTTGTATGACATGCCTATTGCAAGCTTGCGTGCCTCTGTCCCATGTTATTTTACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCTGCTTTGCCTACTATTaGGCAAGAATTGTACAGCCA +
Preference number: 3 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSCFAYY*ARIVQP
Trigger: TGGCTGTACAATTCTTGCCAAATAGTAGGCAAAGCA...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCCAACCACATTTGGGTTaGTTTGTTTCTGAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSQPHLG*FVSEKR
Trigger: CCTTTTCTCAGAAACAAACAAACCCAAATGTGGTTG...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR TCA 72 bp GATCACTACCTCCCAACAGGCACAAAAGCCAGTTCCTaGTACATTAGACTTCAAGATGAAAGACAAAACTTA +
Preference number: 3 (lower is better)
Translates to: DHYLPTGTKASS*YIRLQDERQNL
Trigger: TAAGTTTTGTCTTTCATCTTGAAGTCTAATGTATCAGGAACTGGCTTTTGTGCCTGTTGGGAGGTAGTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR TCA 72 bp TATATGACTGACGGGAGTACATTAGAACAGCCACTTTaGAAAGCAATTTGGTACTGCAGTAGACTATTGTTC +
Preference number: 3 (lower is better)
Translates to: YMTDGSTLEQPL*KAIWYCSRLLF
Trigger: GAACAATAGTCTACTGCAGTACCAAATTGCTTTTCAAAGTGGCTGTTCTAATGTACTCCCGTCAGTCATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR TCA 72 bp GAGAGCTGTTACAAAGCTATTGTAATAAACACAGTGTaGTACTGGCACAGGATAGACAAATTGACAATGGAA +
Preference number: 3 (lower is better)
Translates to: ESCYKAIVINTV*YWHRIDKLTME
Trigger: TTCCATTGTCAATTTGTCTATCCTGTGCCAGTATCACACTGTGTTTATTACAATAGCTTTGTAACAGCTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp CCCGGAGAGAGGTCGGCTGGAGATGGTCCACAGACCACGTCCCTCTCCTTCGTCCTGCGGAGAGTGTCCTaGCTCTCTCGCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGERSAGDGPQTTSLSFVLRRVS*LSRRGR
Trigger: CCTGCCCCTGCGAGAGAGCCAGGACACTCTCCGCAG...GACGAAGGAGAGGGACGTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS-3UTR TCA 90 bp TCACAGAGGATGCTCCCGGAGAGAGGTCGGCTGGAGATGGTCCACAGACCACGTCCTGCCCCCAGGCAGTaGAACCCTGGAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SQRMLPERGRLEMVHRPRPAPRQ*NPGVQS
Trigger: TGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGG...ACGTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCGGGAGCATCCTCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS-3UTR GCA 90 bp CGGAGCGTGAGGAAGAACAGCAGGAAGAGCAACGCAGTCGACGTCAGCGCAAGACGGGGTCACAGAGGATaGTCCCGGAGAGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: RSVRKNSRKSNAVDVSARRGHRG*SRREVG
Trigger: GCCGACCTCTCTCCGGGAGCATCCTCTGTGACCCCG...TCTTGCGCTGACGTCGACTGCGTTGCTCTTCCTGCTGTTCTTCCTCACGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS-3UTR GCA 90 bp TCACAGAGGATGCTCCCGGAGAGAGGTCGGCTGGAGATGGTCCACAGACCACGTCCTGTTCACACATGCTaGATCCTGCCCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SQRMLPERGRLEMVHRPRPVHTC*ILPPGS
Trigger: ACTGCCTGGGGGCAGGATGCAGCATGTGTGAACAGG...ACGTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCGGGAGCATCCTCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS-3UTR GCA 90 bp GTCACAGAGGATGCTCCCGGAGAGAGGTCGGCTGGAGATGGTCCACAGACCACGAATCCTGTTCACACATaGTGCATCCTGCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VTEDAPGERSAGDGPQTTNPVHT*CILPPG
Trigger: GCCTGGGGGCAGGATGCAGCATGTGTGAACAGGATT...CGTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCGGGAGCATCCTCTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS-3UTR GCA 90 bp GAGCAACGCAGTCGACGTCAGCGCAAGAAAGAAGGAGATGATCTGCGGAGAGTGACACATGCTGCATCCTaGCCCCAGGCAGTGAAACCC +
Preference number: 4 (lower is better)
Translates to: EQRSRRQRKKEGDDLRRVTHAAS*PQAVKP
Trigger: GGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGT...CACTCTCCGCAGATCATCTCCTTCTTTCTTGCGCTGACGTCGACTGCGTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS-3UTR GCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACCGGGGTCACAGAGGATaGTCCCGGAGAGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYRGHRG*SRREVG
Trigger: GCCGACCTCTCTCCGGGAGCATCCTCTGTGACCCCG...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCGGGGTCACAGAGGATaGTCCCGGAGAGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLRGHRG*SRREVG
Trigger: GCCGACCTCTCTCCGGGAGCATCCTCTGTGACCCCG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGCGGTCCCAGCTCACTaGAACCTCTGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPAVPAH*NLCLPG
Trigger: GCCTGGGAGGCAGAGGTTGCAGTGAGCTGGGACCGC...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCTGCGGAGAGTGTCCTaGCTCTCTCGCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLLRRVS*LSRRGR
Trigger: CCTGCCCCTGCGAGAGAGCCAGGACACTCTCCGCAG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCCTGCCCCCAGGCAGTaGAACCCTGGAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLPAPRQ*NPGVQS
Trigger: TGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGACTCCTGACCTCAGGTaGTCCATCCGCGTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLTPDLR*SIRVGL
Trigger: GAGGCCGACGCGGATGGATCACCTGAGGTCAGGAGT...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCACACCAGGTTTGGCCATaGGAGTTTGGCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPHQVWP*EFGGPH
Trigger: GTGGGGGCCGCCAAACTCCCATGGCCAAACCTGGTG...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp AAGAGCAACGCAGTCGACGTCAGCGCAAGAAAGAAGGAGATGATCTGCGGAGAGAGTGAAACCCTGGAGTaGAGTCACACTCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: KSNAVDVSARKKEMICGESETLE*SHTLHC
Trigger: GCAATGCAGAGTGTGACTGCACTCCAGGGTTTCACT...CTCTCCGCAGATCATCTCCTTCTTTCTTGCGCTGACGTCGACTGCGTTGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS-3UTR GCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAGCGGTCCCAGCTCACTaGAACCTCTGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIAVPAH*NLCLPG
Trigger: GCCTGGGAGGCAGAGGTTGCAGTGAGCTGGGACCGC...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCGGAGAGAGGTCGGCTaGAGATGGTCCACAGACCAC +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLRREVG*RWSTDH
Trigger: GTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACCGGAGAGAGGTCGGCTaGAGATGGTCCACAGACCAC +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYRREVG*RWSTDH
Trigger: GTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCG...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATACCTGCCCCCAGGCAGTaGAACCCTGGAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIPAPRQ*NPGVQS
Trigger: TGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGG...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACCCTGTTCACACATGCTaGATCCTGCCCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYPVHTC*ILPPGS
Trigger: ACTGCCTGGGGGCAGGATGCAGCATGTGTGAACAGG...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp CCCAATCATAGCTCTAGTTTCAATTCAGCAGCACTTATTTTCGTCTTGAGGGTTCTGCGGAGAGTGTCCTaGCTCTCTCGCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PNHSSSFNSAALIFVLRVLRRVS*LSRRGR
Trigger: CCTGCCCCTGCGAGAGAGCCAGGACACTCTCCGCAG...AACCCTCAAGACGAAAATAAGTGCTGCTGAATTGAAACTAGAGCTATGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474475.1
CDS-3UTR CCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATACACCAGGTTTGGCCATaGGAGTTTGGCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIHQVWP*EFGGPH
Trigger: GTGGGGGCCGCCAAACTCCCATGGCCAAACCTGGTG...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGATGGTGCACCAGGTTTaGCCATGGGAGTTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLMVHQV*PWEFGG
Trigger: GCCGCCAAACTCCCATGGCCAAACCTGGTGCACCAT...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACCTGGTCTCGAACTCCTaGGCTCAAGCGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYLVSNS*AQAICP
Trigger: TGGGCAGATCGCTTGAGCCCAGGAGTTCGAGACCAG...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCATTCTGCCACAGCCTCTaGAGCAGCTGGGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPFCHSL*SSWGYR
Trigger: CCTGTAACCCCAGCTGCTCCAGAGGCTGTGGCAGAA...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp AGGAAGAACAGCAGGAAGAGCAACGCAGTCGACGTCAGCGCAAGAAAGAAGGAGCAGATGCCACGTTTCTaGTCGTTAAATGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RKNSRKSNAVDVSARKKEQMPRF*SLNVPK
Trigger: CTTTGGGACATTTAACGATCAGAAACGTGGCATCTG...CTCCTTCTTTCTTGCGCTGACGTCGACTGCGTTGCTCTTCCTGCTGTTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS-3UTR GCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATACCCAGAGGTCAAGGCTaGAGAGAGCCATGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIPRGQG*REPWWC
Trigger: GCACCACCATGGCTCTCTGCAGCCTTGACCTCTGGG...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGTCACCCAGGCTGGAGTaGAATGGTACGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLSPRLE*NGTISA
Trigger: AGCCGAGATCGTACCATTGCACTCCAGCCTGGGTGA...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp CTTATTTTCGTCTTGAGGGTTACTGAGATTCGAGATCCGATGGTTTCCTTGGAACGGAGAGAGGTCGGCTaGAGATGGTCCACAGACCAC +
Preference number: 4 (lower is better)
Translates to: LIFVLRVTEIRDPMVSLERREVG*RWSTDH
Trigger: GTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCG...TTCCAAGGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAAAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474475.1
3UTR CAA 72 bp CAGGGACCAGTGGTTACCTACATGCAAGACATGGAATaGGATCACTACCTCCCAACAGGCACAAAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QGPVVTYMQDME*DHYLPTGTKAS
Trigger: ACTGGCTTTTGTGCCTGTTGGGAGGTAGTGATCCAATTCCATGTCTTGCATGTAGGTAACCACTGGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCACACAAATGTCACTCTTaGGATCTCAGGGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPHKCHS*DLRAAG
Trigger: TCCGGCAGCCCTGAGATCTCAAGAGTGACATTTGTG...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACGAAACTGGGAGGCGGTaGTCCAAGATTGTACCACTG +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYETGRR*SKIVPL
Trigger: CAGTGGTACAATCTTGGATCACCGCCTCCCAGTTTC...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGGAAACTGGGAGGCGGTaGTCCAAGATTGTACCACTG +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLETGRR*SKIVPL
Trigger: CAGTGGTACAATCTTGGATCACCGCCTCCCAGTTTC...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCTGAGGTCAGGAGTTTaGGACCAGCCTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLLRSGV*DQPGQH
Trigger: ATGTTGTCCAGGCTGGTCTCAAACTCCTGACCTCAG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCACTCCTGACCTCAGGTaGTCCATCCGCGTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFTPDLR*SIRVGL
Trigger: GAGGCCGACGCGGATGGATCACCTGAGGTCAGGAGT...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCTGTCTCAAAACTCCTaGCCTCAGGTGATCCATCCG +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLLSQNS*PQVIHP
Trigger: CGGATGGATCACCTGAGGTCAGGAGTTTTGAGACAG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACTTGAGATCTCAGGGCTaGCGGAGAACTTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYLRSQG*RRTFHS
Trigger: GGAGTGGAAAGTTCTCCGGCAGCCCTGAGATCTCAA...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAACACATGCTGCATCCTaGCCCCAGGCAGTGAAACCC +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVITHAAS*PQAVKP
Trigger: GGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGT...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp AATCATAGCTCTAGTTTCAATTCAGCAGCACTTATTTTCGTCTTGAGGGTTACTCGGGGTCACAGAGGATaGTCCCGGAGAGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: NHSSSFNSAALIFVLRVTRGHRG*SRREVG
Trigger: GCCGACCTCTCTCCGGGAGCATCCTCTGTGACCCCG...AGTAACCCTCAAGACGAAAATAAGTGCTGCTGAATTGAAACTAGAGCTATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474475.1
CDS-3UTR GCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCCCCAGAGGTCAAGGCTaGAGAGAGCCATGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSPRGQG*REPWWC
Trigger: GCACCACCATGGCTCTCTGCAGCCTTGACCTCTGGG...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACCAGGCATGCCAGGTTTaGACCTGTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYQACQV*TCNPSY
Trigger: GTAGCTGGGATTACAGGTGCAAACCTGGCATGCCTG...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCAGGCATGCCAGGTTTaGACCTGTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLQACQV*TCNPSY
Trigger: GTAGCTGGGATTACAGGTGCAAACCTGGCATGCCTG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCAGGGCACATGTAACCTaGCCTAGCTGCGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSRAHVT*PSCGGH
Trigger: GTGCCCACCGCAGCTAGGGCAGGTTACATGTGCCCT...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGACTCTGCATTGCTGGTaGAGGAACACTCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLTLHCW*RNTPSW
Trigger: CCAGGAAGGAGTGTTCCTCCACCAGCAATGCAGAGT...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCACTCGCTCCATTATCTTaGATACCCCAACCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPLAPLS*IPQPCG
Trigger: CCCACAGGGTTGGGGTATCCAAGATAATGGAGCGAG...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCACCTCTCACCCACAGATaGAAACATCTTCCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPPLTHR*KHLPVG
Trigger: CCCCACAGGAAGATGTTTCCATCTGTGGGTGAGAGG...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCATTGTCCTCTCAAAGTTaGGGACCAGCAACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPLSSQS*GPATEW
Trigger: CCACTCTGTTGCTGGTCCTCAACTTTGAGAGGACAA...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACACTCCTTCCTGGTCCTaGAAACACCTTTACACTGCC +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYTPSWS*KHLYTA
Trigger: GGCAGTGTAAAGGTGTTTTCAGGACCAGGAAGGAGT...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp TTCGTCTTGAGGGTTACTGAGATTCGAGATCCGATGGTTTCCTTGGAATGCAGTCGTCTTGAGGGTTACTaGGATTCGAGATCCGATGGT +
Preference number: 4 (lower is better)
Translates to: FVLRVTEIRDPMVSLECSRLEGY*DSRSDG
Trigger: ACCATCGGATCTCGAATCTCAGTAACCCTCAAGACG...ACTGCATTCCAAGGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474475.1
CDS-3UTR TCA 90 bp GAAGAGCAACGCAGTCGACGTCAGCGCAAGAAAGAAGGAGATGATCTGCGGAGATTTTCTTGTGAATCATaGTTCCATTCGTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: EEQRSRRQRKKEGDDLRRFSCES*FHSSAT
Trigger: AGTGGCTGACGAATGGAATCATGATTCACAAGAAAA...TCTCCGCAGATCATCTCCTTCTTTCTTGCGCTGACGTCGACTGCGTTGCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS-3UTR GCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACGGTCCTTTGTCCACCTaGGCTGGAGAAACTATTTGG +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYGPLST*AGETIW
Trigger: CCAAATAGTTTCTCCAGCGCAGGTGGACAAAGGACC...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAAGTCACACTCTGCATTaGTGGTGGAGGAACACTCCT +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPSHTLH*WWRNTP
Trigger: AGGAGTGTTCCTCCACCAGCAATGCAGAGTGTGACT...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGAGTGAAACCCTGGAGTaGAGTCACACTCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLSETLE*SHTLHC
Trigger: GCAATGCAGAGTGTGACTGCACTCCAGGGTTTCACT...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCACACATGCTGCATCCTaGCCCCAGGCAGTGAAACCC +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSTHAAS*PQAVKP
Trigger: GGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGT...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCCCTGTTCACACATGCTaGATCCTGCCCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSPVHTC*ILPPGS
Trigger: ACTGCCTGGGGGCAGGATGCAGCATGTGTGAACAGG...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAAACAAAGGCAAATGGTaGACCAGGTTTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPNKGKW*TRFGHG
Trigger: CCCATGGCCAAACCTGGTGCACCATTTGCCTTTGTT...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGATGCCTGGCTTGGCTaGAGGATTTGCTCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPDAWLG*RICSKG
Trigger: ACCTTTAGAGCAAATCCTGCAGCCAAGCCAGGCATC...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGAGGTGTGAGCTACCGTaGCTGGCCACAAAGAAGATA +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLRCELP*LATKKI
Trigger: TATCTTCTTTGTGGCCAGGCACGGTAGCTCACACCT...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTTGAATATATACAGGAGTTTCTTTCTGCCCCGTTTAACAACAGAGAAACGGAGCGGAGAGAGGTCGGCTaGAGATGGTCCACAGACCAC +
Preference number: 4 (lower is better)
Translates to: FEYIQEFLSAPFNNRETERREVG*RWSTDH
Trigger: GTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCG...CTCCGTTTCTCTGTTGTTAAACGGGGCAGAAAGAAACTCCTGTATATATTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS-3UTR CCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCCTGGTCTCGAACTCCTaGGCTCAAGCGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSLVSNS*AQAICP
Trigger: TGGGCAGATCGCTTGAGCCCAGGAGTTCGAGACCAG...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGAACCTACTGAGTAGCTaGGACTTCAGGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLNLLSS*DFRCTP
Trigger: TGGTGTGCACCTGAAGTCCCAGCTACTCAGTAGGTT...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCTTCTGCCACAGCCTCTaGAGCAGCTGGGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSFCHSL*SSWGYR
Trigger: CCTGTAACCCCAGCTGCTCCAGAGGCTGTGGCAGAA...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGTTTGGAAGGCTGAGGTaGGAGGATCACTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLFGRLR*EDHLSS
Trigger: TGAGCTCAAGTGATCCTCCCACCTCAGCCTTCCAAA...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGGGTTTCACCATGTTaGCCAGGCTGTCTCAAAACT +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPGVSPC*PGCLKT
Trigger: AGTTTTGAGACAGCCTGGCCAACATGGTGAAACCCC...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGGCATGTCGTGTTACATaGCAGAACCCACGGAAACTT +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLACRVT*QNPRKL
Trigger: AAGTTTCCGTGGGTTCTGTCATGTAACACGACATGC...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCAATCCTGTTCACACATaGTGCATCCTGCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSNPVHT*CILPPG
Trigger: GCCTGGGGGCAGGATGCAGCATGTGTGAACAGGATT...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTAGGGCACATGTAACCTaGCCTAGCTGCGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFRAHVT*PSCGGH
Trigger: GTGCCCACCGCAGCTAGGGCAGGTTACATGTGCCCT...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACGGACCAGCAACAGAGTaGCTACTATGTTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYGPATE*LLCCNS
Trigger: GCTGTTACAACATAGTAGCCACTCTGTTGCTGGTCC...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGGTGTTGGGGGAATCCTaGGTATTATGTAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLVLGES*VLCRMV
Trigger: CACCATCCTACATAATACCCAGGATTCCCCCAACAC...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACGTAATCCCAGCACTTTaGGAGGCCAAAGTGAACCTA +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYVIPAL*EAKVNL
Trigger: TAGGTTCACTTTGGCCTCCCAAAGTGCTGGGATTAC...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCATGGTGCACCAGGTTTaGCCATGGGAGTTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFMVHQV*PWEFGG
Trigger: GCCGCCAAACTCCCATGGCCAAACCTGGTGCACCAT...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATATGCCCTATTGATGCCTaGCTTGGCTGCAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVICPIDA*LGCRIC
Trigger: GCAAATCCTGCAGCCAAGCCAGGCATCAATAGGGCA...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATACTCGCTCCATTATCTTaGATACCCCAACCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVILAPLS*IPQPCG
Trigger: CCCACAGGGTTGGGGTATCCAAGATAATGGAGCGAG...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGAAACATCTTCCTGTaGGGGAAGATGCCCACTTTA +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPGNIFL*GKMPTL
Trigger: TAAAGTGGGCATCTTCCCCCACAGGAAGATGTTTCC...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATACCTCTCACCCACAGATaGAAACATCTTCCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIPLTHR*KHLPVG
Trigger: CCCCACAGGAAGATGTTTCCATCTGTGGGTGAGAGG...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CAA 72 bp AAGACCACAGTGAGATCTCATTCTATACCCACTGGCTaGGCAAAATTAAGGGCACCTGATAGTACCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KTTVRSHSIPTG*AKLRAPDSTRG
Trigger: CCCTCTGGTACTATCAGGTGCCCTTAATTTTGCCAAGCCAGTGGGTATAGAATGAGATCTCACTGTGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCCACAAATGTCACTCTTaGGATCTCAGGGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSHKCHS*DLRAAG
Trigger: TCCGGCAGCCCTGAGATCTCAAGAGTGACATTTGTG...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAACTCCTTCCTGGTCCTaGAAACACCTTTACACTGCC +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVITPSWS*KHLYTA
Trigger: GGCAGTGTAAAGGTGTTTTCAGGACCAGGAAGGAGT...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp CTTATTTTCGTCTTGAGGGTTACTGAGATTCGAGATCCGATGGTTTCCTTGGAAATGACTCCAGGATTGTaGAGGTATCCCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LIFVLRVTEIRDPMVSLEMTPGL*RYPHCF
Trigger: GAAGCAGTGGGGATACCTTCACAATCCTGGAGTCAT...TTCCAAGGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAAAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474475.1
CDS-3UTR GCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAGGTCCTTTGTCCACCTaGGCTGGAGAAACTATTTGG +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIGPLST*AGETIW
Trigger: CCAAATAGTTTCTCCAGCGCAGGTGGACAAAGGACC...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAAGTCACACTCTGCATTaGTGGTGGAGGAACACTCCT +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVISHTLH*WWRNTP
Trigger: AGGAGTGTTCCTCCACCAGCAATGCAGAGTGTGACT...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACAAACAATGGCAGGCATaGCAGGTTTGCACCTGTAAT +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYKQWQA*QVCTCN
Trigger: ATTACAGGTGCAAACCTGGCATGCCTGCCATTGTTT...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCACTCTGCATTGCTGGTaGAGGAACACTCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSTLHCW*RNTPSW
Trigger: CCAGGAAGGAGTGTTCCTCCACCAGCAATGCAGAGT...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAACAAACAAAGGCAAATaGTGCACCAGGTTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPTNKGK*CTRFGH
Trigger: ATGGCCAAACCTGGTGCACCATTTGCCTTTGTTTGT...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCGATACCCCAACCCTGTaGGGCATGACCAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSDTPTL*GMTSLF
Trigger: AAAGAGACTGGTCATGCCCCACAGGGTTGGGGTATC...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTAGGGGCGGGGTCTCATaGGAAATTCCCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFRGGVS*EIPTTA
Trigger: AGCTGTGGTGGGAATTTCCCATGAGACCCCGCCCCT...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000615230.4
CDS-3UTR TCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCTTGTCCTCTCAAAGTTaGGGACCAGCAACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSLSSQS*GPATEW
Trigger: CCACTCTGTTGCTGGTCCTCAACTTTGAGAGGACAA...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCCTGAGGTCAGGAGTTTaGGACCAGCCTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFLRSGV*DQPGQH
Trigger: ATGTTGTCCAGGCTGGTCTCAAACTCCTGACCTCAG...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCCTGTCTCAAAACTCCTaGCCTCAGGTGATCCATCCG +
Preference number: 4 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFLSQNS*PQVIHP
Trigger: CGGATGGATCACCTGAGGTCAGGAGTTTTGAGACAG...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GCAGCACTTATTTTCGTCTTGAGGGTTACTGAGATTCGAGATCCGATGGTTTCCCACTTATTTTCGTCTTaGGGGTTACTGAGATTCGAG +
Preference number: 4 (lower is better)
Translates to: AALIFVLRVTEIRDPMVSHLFSS*GLLRFE
Trigger: CTCGAATCTCAGTAACCCTCAAGACGAAAATAAGTG...GGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAAAATAAGTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474475.1
CDS-3UTR GCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCATTGGAGGACAGGGACTaGAAATCTGATTCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPLEDRD*KSDSCY
Trigger: ATAACAGGAATCAGATTTGCAGTCCCTGTCCTCCAA...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACTTGGAGGACAGGGACTaGAAATCTGATTCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYLEDRD*KSDSCY
Trigger: ATAACAGGAATCAGATTTGCAGTCCCTGTCCTCCAA...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGAAAACACCTTTACACTaGCTGCATATGTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLKTPLH*LHMSQV
Trigger: GACCTGTGACATATGCAGGCAGTGTAAAGGTGTTTT...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTAATCCTGTTCACACATaGTGCATCCTGCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFNPVHT*CILPPG
Trigger: GCCTGGGGGCAGGATGCAGCATGTGTGAACAGGATT...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCAACAAAGGCAAATGGTaGACCAGGTTTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSNKGKW*TRFGHG
Trigger: CCCATGGCCAAACCTGGTGCACCATTTGCCTTTGTT...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCGATGCCTGGCTTGGCTaGAGGATTTGCTCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSDAWLG*RICSKG
Trigger: ACCTTTAGAGCAAATCCTGCAGCCAAGCCAGGCATC...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACCAGTGGTTACCTACATaGAAGACATGGAATTGGATC +
Preference number: 4 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYQWLPT*KTWNWI
Trigger: GATCCAATTCCATGTCTTGCATGTAGGTAACCACTG...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTTCACCCAGGCTGGAGTaGAATGGTACGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFSPRLE*NGTISA
Trigger: AGCCGAGATCGTACCATTGCACTCCAGCCTGGGTGA...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCTCCTGTGGGGGAAGATaGCCACTTTATAGTCATCCG +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSSCGGR*PLYSHP
Trigger: CGGATGACTATAAAGTGGGCATCTTCCCCCACAGGA...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCATCCCATGATGAAATCTaGCACAGGTATGATACTAGC +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPSHDEI*HRYDTS
Trigger: GCTAGTATCATACCTGTGCCAGATTTCATCATGGGA...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGAGGGTAGCAAGGATGTaGATCAATGGGATACTTACA +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLRVARM*INGILT
Trigger: TGTAAGTATCCCATTGATCCACATCCTTGCTACCCT...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGTCATTCTATACCCACTaGCTTGGCAAAATTAAGGGC +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLSFYTH*LGKIKG
Trigger: GCCCTTAATTTTGCCAAGCCAGTGGGTATAGAATGA...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCATTAGAACAGCCACTTTaGAAAGCAATTTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPLEQPL*KAIWYC
Trigger: GCAGTACCAAATTGCTTTTCAAAGTGGCTGTTCTAA...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp CTTATTTTCGTCTTGAGGGTTACTGAGATTCGAGATCCGATGGTTTCCTTGGAATGGAATGCAGTGTTATaGCTCCAGGATTGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LIFVLRVTEIRDPMVSLEWNAVL*LQDCEG
Trigger: ACCTTCACAATCCTGGAGTCATAACACTGCATTCCA...TTCCAAGGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474475.1
CDS-3UTR GCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTTTGAGATCTCAGGGCTaGCGGAGAACTTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFLRSQG*RRTFHS
Trigger: GGAGTGGAAAGTTCTCCGGCAGCCCTGAGATCTCAA...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAAGAGGCACGCAAGCTTaGAATAGGCATGTCATACAA +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIRGTQA*NRHVIQ
Trigger: TTGTATGACATGCCTATTGCAAGCTTGCGTGCCTCT...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCTTGGCTGCAGGATTTaGTCTAAAGGTTATAGTAGA +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLLGCRI*SKGYSR
Trigger: TCTACTATAACCTTTAGAGCAAATCCTGCAGCCAAG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTCACACTCTGCATTGCTaGTGGAGGAACACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFHTLHC*WRNTPS
Trigger: GGAAGGAGTGTTCCTCCACCAGCAATGCAGAGTGTG...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAACTTACTGCACCTCGTaGCTTATTGTCATATGTCAT +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPTYCTS*LIVICH
Trigger: ATGACATATGACAATAAGCCACGAGGTGCAGTAAGT...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAGTGAGCTACCGTGCCTaGCCACAAAGAAGATATTTT +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIVSYRA*PQRRYF
Trigger: AAAATATCTTCTTTGTGGCCAGGCACGGTAGCTCAC...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGCTTTGCCTACTATTTaGCAAGAATTGTACAGCCAA +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPALPTI*QELYSQ
Trigger: TTGGCTGTACAATTCTTGCCAAATAGTAGGCAAAGC...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp CTTATTTTCGTCTTGAGGGTTACTGAGATTCGAGATCCGATGGTTTCCTTGGAAAGATTCGAGATCCGATaGTTTCCTTGGAATGCAGTG +
Preference number: 4 (lower is better)
Translates to: LIFVLRVTEIRDPMVSLERFEIR*FPWNAV
Trigger: CACTGCATTCCAAGGAAACCATCGGATCTCGAATCT...TTCCAAGGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474475.1
3UTR CAA 72 bp TTGGGGGAATCCTGGGTATTATGTAGGATGGTGTTCTaGCTTTTGAAAGCTGTGATAGCGGATGACTCATAT +
Preference number: 4 (lower is better)
Translates to: LGESWVLCRMVF*LLKAVIADDSY
Trigger: ATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CAA 72 bp AGCTCTAGTTTCAATTCAGCAGCACTTATTTTCGTCTaGAGGGTTACTGAGATTCGAGATCCGATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SSSFNSAALIFV*RVTEIRDPMVS
Trigger: GGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAAAATAAGTGCTGCTGAATTGAAACTAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474475.1
CDS-3UTR TCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCCAGATGCCACGTTTCTaGTCGTTAAATGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSQMPRF*SLNVPK
Trigger: CTTTGGGACATTTAACGATCAGAAACGTGGCATCTG...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTAGTGAAACCCTGGAGTaGAGTCACACTCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFSETLE*SHTLHC
Trigger: GCAATGCAGAGTGTGACTGCACTCCAGGGTTTCACT...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCATTTAAGGCTAAAGTGTaGTATGATTGTGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPFKAKV*YDCACE
Trigger: TTCACAGGCACAATCATAGCACACTTTAGCCTTAAA...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGTTTAAGGCTAAAGTGTaGTATGATTGTGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLFKAKV*YDCACE
Trigger: TTCACAGGCACAATCATAGCACACTTTAGCCTTAAA...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCAAACAATGGCAGGCATaGCAGGTTTGCACCTGTAAT +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSKQWQA*QVCTCN
Trigger: ATTACAGGTGCAAACCTGGCATGCCTGCCATTGTTT...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTAGGTGTGAGCTACCGTaGCTGGCCACAAAGAAGATA +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFRCELP*LATKKI
Trigger: TATCTTCTTTGTGGCCAGGCACGGTAGCTCACACCT...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTTCCTGTGGGGGAAGATaGCCACTTTATAGTCATCCG +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFSCGGR*PLYSHP
Trigger: CGGATGACTATAAAGTGGGCATCTTCCCCCACAGGA...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCACAAACAAAGGCAAATaGTGCACCAGGTTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSTNKGK*CTRFGH
Trigger: ATGGCCAAACCTGGTGCACCATTTGCCTTTGTTTGT...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAAGGGTAGCAAGGATGTaGATCAATGGGATACTTACA +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIRVARM*INGILT
Trigger: TGTAAGTATCCCATTGATCCACATCCTTGCTACCCT...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTAACCTACTGAGTAGCTaGGACTTCAGGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFNLLSS*DFRCTP
Trigger: TGGTGTGCACCTGAAGTCCCAGCTACTCAGTAGGTT...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCGTGAGCTACCGTGCCTaGCCACAAAGAAGATATTTT +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSVSYRA*PQRRYF
Trigger: AAAATATCTTCTTTGTGGCCAGGCACGGTAGCTCAC...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTTTTGGAAGGCTGAGGTaGGAGGATCACTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFFGRLR*EDHLSS
Trigger: TGAGCTCAAGTGATCCTCCCACCTCAGCCTTCCAAA...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCAGTAGAAAAAGAAGGTaGAGGGAGATGTCCTACCGG +
Preference number: 4 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFSRKRR*REMSYR
Trigger: CCGGTAGGACATCTCCCTCCACCTTCTTTTTCTACT...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTGGGGTTTCACCATGTTaGCCAGGCTGTCTCAAAACT +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFGVSPC*PGCLKT
Trigger: AGTTTTGAGACAGCCTGGCCAACATGGTGAAACCCC...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTGAACTTTCCACTCCTTaGTCTTCAGGCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFELSTP*SSGFCS
Trigger: GCTGCAGAAGCCTGAAGACCAAGGAGTGGAAAGTTC...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615230.4
CDS-3UTR TCA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCCAGGGACTGCAAATCTaGTTCCTGTTATTATCACAG +
Preference number: 4 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSQGLQI*FLLLSQ
Trigger: CTGTGATAATAACAGGAATCAGATTTGCAGTCCCTG...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTCAGCCATCTTCCTCTTaGGTAGTTTGTACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFQPSSS*VVCTGL
Trigger: GAGACCAGTACAAACTACTCAAGAGGAAGATGGCTG...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCAGCTGTGATAGCGGATaGCTCATATTTCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFSCDSG*LIFPCF
Trigger: GAAGCAAGGAAATATGAGTCATCCGCTATCACAGCT...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTGCATGTCGTGTTACATaGCAGAACCCACGGAAACTT +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFACRVT*QNPRKL
Trigger: AAGTTTCCGTGGGTTCTGTCATGTAACACGACATGC...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAGGATATACAGACACTTaGACTCTTTCCAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIGYTDT*TLSKTS
Trigger: GGAAGTTTTGGAAAGAGTTCAAGTGTCTGTATATCC...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATACTTGGCTGCAGGATTTaGTCTAAAGGTTATAGTAGA +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVILGCRI*SKGYSR
Trigger: TCTACTATAACCTTTAGAGCAAATCCTGCAGCCAAG...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTGGACCAGCAACAGAGTaGCTACTATGTTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFGPATE*LLCCNS
Trigger: GCTGTTACAACATAGTAGCCACTCTGTTGCTGGTCC...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCGCTGGAGAAACTATTTaGAGGACAGGGACTGCAAAT +
Preference number: 4 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFAGETI*RTGTAN
Trigger: ATTTGCAGTCCCTGTCCTCCAAATAGTTTCTCCAGC...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTTTTGTCCACCTGCGCTaGAGAAACTATTTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFFVHLR*RNYLED
Trigger: GTCCTCCAAATAGTTTCTCCAGCGCAGGTGGACAAA...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTGTAATCCCAGCACTTTaGGAGGCCAAAGTGAACCTA +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFVIPAL*EAKVNL
Trigger: TAGGTTCACTTTGGCCTCCCAAAGTGCTGGGATTAC...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAACTTACTGCACCTCGTaGCTTATTGTCATATGTCAT +
Preference number: 4 (lower is better)
Translates to: GESWVLCRMVFLLLKAVITYCTS*LIVICH
Trigger: ATGACATATGACAATAAGCCACGAGGTGCAGTAAGT...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCCAGAGTAAAATAACATaGGACAGAGGCACGCAAGCT +
Preference number: 4 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFQSKIT*DRGTQA
Trigger: AGCTTGCGTGCCTCTGTCCCATGTTATTTTACTCTG...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTGGAAACATCTTCCTGTaGGGGAAGATGCCCACTTTA +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFGNIFL*GKMPTL
Trigger: TAAAGTGGGCATCTTCCCCCACAGGAAGATGTTTCC...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTCAGATGCCACGTTTCTaGTCGTTAAATGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFQMPRF*SLNVPK
Trigger: CTTTGGGACATTTAACGATCAGAAACGTGGCATCTG...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCAAAACACCTTTACACTaGCTGCATATGTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFKTPLH*LHMSQV
Trigger: GACCTGTGACATATGCAGGCAGTGTAAAGGTGTTTT...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTACAGAATGTACCAGCTaGGCAGTTACTACAAGGATC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFTECTS*AVTTRI
Trigger: GATCCTTGTAGTAACTGCCCAGCTGGTACATTCTGT...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
3UTR CAA 72 bp GAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTaGAAAGCTGTGATAGCGGATGACTCATATTTCCTT +
Preference number: 4 (lower is better)
Translates to: ESWVLCRMVFLL*KAVIADDSYFL
Trigger: AAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTACAAGGATCCTGCAATaGTCTTGTCCTCTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFTRILQ*SCPLKV
Trigger: AACTTTGAGAGGACAAGATCATTGCAGGATCCTTGT...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTCAGGGACTGCAAATCTaGTTCCTGTTATTATCACAG +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFQGLQI*FLLLSQ
Trigger: CTGTGATAATAACAGGAATCAGATTTGCAGTCCCTG...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTGCCTGTACAACATGGTaGAATGCCATCTTTACCAAA +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFACTTW*NAIFTK
Trigger: TTTGGTAAAGATGGCATTTCACCATGTTGTACAGGC...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCTTACTACAAGGATCCTaGAATGATCTTGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFLLQGS*NDLVLS
Trigger: TGAGAGGACAAGATCATTGCAGGATCCTTGTAGTAA...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTCAGTGGTTACCTACATaGAAGACATGGAATTGGATC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFQWLPT*KTWNWI
Trigger: GATCCAATTCCATGTCTTGCATGTAGGTAACCACTG...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp AATCATAGCTCTAGTTTCAATTCAGCAGCACTTATTTTCGTCTTGAGGGTTACTATGGTTTCCTTGGAATaGAGTGTTATGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: NHSSSFNSAALIFVLRVTMVSLE*SVMTPG
Trigger: TCCTGGAGTCATAACACTGCATTCCAAGGAAACCAT...AGTAACCCTCAAGACGAAAATAAGTGCTGCTGAATTGAAACTAGAGCTATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474475.1
CDS-3UTR CCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTTCCCATGATGAAATCTaGCACAGGTATGATACTAGC +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFSHDEI*HRYDTS
Trigger: GCTAGTATCATACCTGTGCCAGATTTCATCATGGGA...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCAACTTTCCGTCAGAGTaGTATCTTCCACTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFNFPSE*YLPLKK
Trigger: TTTCTTTAGTGGAAGATATCACTCTGACGGAAAGTT...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR GCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTCAGAATATACTTTTCTaGCCTATTGATGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFQNILF*PIDAWL
Trigger: AAGCCAGGCATCAATAGGGCAGAAAAGTATATTCTG...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR TCA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTAACTTTCCGTCAGAGTaGTATCTTCCACTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: FLLLKAVIADDSYFLASFNFPSE*YLPLKK
Trigger: TTTCTTTAGTGGAAGATATCACTCTGACGGAAAGTT...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS TCA 90 bp GCTTCTGCAGCTCGAGAGGACTTCAGGTCAAACACAGGAGTGCGGTaGCTCAGCCAGGGGCGGGGTCTCATGGGAAATTCCCACCACAGC +
Preference number: 5 (lower is better)
Translates to: ASAAREDFRSNTGVR*LSQGRGLMGNSHHS
Trigger: GCTGTGGTGGGAATTTCCCATGAGACCCCGCCCCTGGCTGAGTCACCGCACTCCTGTGTTTGACCTGAAGTCCTCTCGAGCTGCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615230.4
ENST00000674210.1
CDS GCA 90 bp GCATCCTGCCCCCAGGCAGTGAAACCCTGGAGTGCAGTCACACTCTaGATTGCTGGTGGAGGAACACTCCTTCCTGGTCCTGAAAACACC +
Preference number: 5 (lower is better)
Translates to: ASCPQAVKPWSAVTL*IAGGGTLLPGPENT
Trigger: GGTGTTTTCAGGACCAGGAAGGAGTGTTCCTCCACCAGCAATGCAGAGTGTGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS GCA 90 bp GTTCACACATGCTGCATCCTGCCCCCAGGCAGTGAAACCCTGGAGTaGAGTCACACTCTGCATTGCTGGTGGAGGAACACTCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: VHTCCILPPGSETLE*SHTLHCWWRNTPSW
Trigger: CCAGGAAGGAGTGTTCCTCCACCAGCAATGCAGAGTGTGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS GCA 90 bp CTCAGGGCTGCCGGAGAACTTTCCACTCCTTGGTCTTCAGGCTTCTaGAGCTCGAGAGGACTTCAGGTCAAACACAGGAGTGCGGTGACT +
Preference number: 5 (lower is better)
Translates to: LRAAGELSTPWSSGF*SSRGLQVKHRSAVT
Trigger: AGTCACCGCACTCCTGTGTTTGACCTGAAGTCCTCTCGAGCTGCAGAAGCCTGAAGACCAAGGAGTGGAAAGTTCTCCGGCAGCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615230.4
ENST00000674210.1
CDS CCA 90 bp ATCCTGTTCACACATGCTGCATCCTGCCCCCAGGCAGTGAAACCCTaGAGTGCAGTCACACTCTGCATTGCTGGTGGAGGAACACTCCTT +
Preference number: 5 (lower is better)
Translates to: ILFTHAASCPQAVKP*SAVTLCIAGGGTLL
Trigger: AAGGAGTGTTCCTCCACCAGCAATGCAGAGTGTGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGTGAACAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS-3UTR CAA 90 bp CCCGGAGAGAGGTCGGCTGGAGATGGTCCACAGACCACGTCCCTCTCCTTCGTCTGTCAGTTCTTGACCTaGTTTACAATCCTGTTCACA +
Preference number: 5 (lower is better)
Translates to: PGERSAGDGPQTTSLSFVCQFLT*FTILFT
Trigger: TGTGAACAGGATTGTAAACAAGGTCAAGAACTGACA...GACGAAGGAGAGGGACGTGGTCTGTGGACCATCTCCAGCCGACCTCTCTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS TCA 90 bp TGTTTACAATCCTGTTCACACATGCTGCATCCTGCCCCCAGGCAGTaGAACCCTGGAGTGCAGTCACACTCTGCATTGCTGGTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: CLQSCSHMLHPAPRQ*NPGVQSHSALLVEE
Trigger: TTCCTCCACCAGCAATGCAGAGTGTGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGTGAACAGGATTGTAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGTTTGGCCATGGGAGTTaGGCGGCCCCCACTCTAGTG +
Preference number: 5 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLFGHGS*AAPTLV
Trigger: CACTAGAGTGGGGGCCGCCAAACTCCCATGGCCAAA...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS GCA 90 bp CAGTTCTTGACCTTGTTTACAATCCTGTTCACACATGCTGCATCCTaGCCCCAGGCAGTGAAACCCTGGAGTGCAGTCACACTCTGCATT +
Preference number: 5 (lower is better)
Translates to: QFLTLFTILFTHAAS*PQAVKPWSAVTLCI
Trigger: AATGCAGAGTGTGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGTGAACAGGATTGTAAACAAGGTCAAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377507.8
ENST00000492571.1
ENST00000615230.4
ENST00000674210.1
CDS-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGAATGGTGCACCAGGTTaGGCCATGGGAGTTTGGCGG +
Preference number: 5 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLNGAPG*AMGVWR
Trigger: CCGCCAAACTCCCATGGCCAAACCTGGTGCACCATT...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACCAGGGTTTCGCCATGTaGCCAAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYQGFAM*PRLVSN
Trigger: GTTCGAGACCAGCCTTGGCAACATGGCGAAACCCTG...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCACAGTCACACTCTGCATaGCTGGTGGAGGAACACTCC +
Preference number: 5 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPQSHSA*LVEEHS
Trigger: GGAGTGTTCCTCCACCAGCAATGCAGAGTGTGACTG...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCCTCGCTCCATTATCTaGGATACCCCAACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLPRSII*DTPTLW
Trigger: CCACAGGGTTGGGGTATCCAAGATAATGGAGCGAGG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS GCA 90 bp TTTTTGTCAGTTCTTGACCTTGTTTACAATCCTGTTCACACATGCTaGATCCTGCCCCCAGGCAGTGAAACCCTGGAGTGCAGTCACACT +
Preference number: 5 (lower is better)
Translates to: FLSVLDLVYNPVHTC*ILPPGSETLECSHT
Trigger: AGTGTGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGTGAACAGGATTGTAAACAAGGTCAAGAACTGACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377507.8
ENST00000492571.1
ENST00000615230.4
ENST00000674210.1
CDS-3UTR CAA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAAGGCAGGAGGATCACTaGAGCTCCCAGAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIRQEDH*SSQRSR
Trigger: CCTTGACCTCTGGGAGCTCAAGTGATCCTCCTGCCT...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACGGCAGAATTTCACTCTaGTCACCCAGTCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYGRISL*SPSLEC
Trigger: GCACTCCAGACTGGGTGACAAGAGTGAAATTCTGCC...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGCAGAATTTCACTCTaGTCACCCAGTCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPGRISL*SPSLEC
Trigger: GCACTCCAGACTGGGTGACAAGAGTGAAATTCTGCC...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCATGGGGTTTCACCATGTaGGCCAGGCTGTCTCAAAAC +
Preference number: 5 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPWGFTM*ARLSQN
Trigger: GTTTTGAGACAGCCTGGCCAACATGGTGAAACCCCA...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS TCA 90 bp ATCACAGAATGTACCAGCTGGGCAGTTACTACAAGGATCCTGCAATaGTCTTGTCCTCTCAAAGTTGAGGACCAGCAACAGAGTGGCTAC +
Preference number: 5 (lower is better)
Translates to: ITECTSWAVTTRILQ*SCPLKVEDQQQSGY
Trigger: GTAGCCACTCTGTTGCTGGTCCTCAACTTTGAGAGGACAAGATCATTGCAGGATCCTTGTAGTAACTGCCCAGCTGGTACATTCTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS GCA 90 bp TCCTTTGTCCACCTGCGCTGGAGAAACTATTTGGAGGACAGGGACTaGAAATCTGATTCCTGTTATTATCACAGAATGTACCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SFVHLRWRNYLEDRD*KSDSCYYHRMYQLG
Trigger: GCCCAGCTGGTACATTCTGTGATAATAACAGGAATCAGATTTGCAGTCCCTGTCCTCCAAATAGTTTCTCCAGCGCAGGTGGACAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS GCA 90 bp AACACCTTTACACTGCCTGCATATGTCACAGGTCCTTTGTCCACCTaGGCTGGAGAAACTATTTGGAGGACAGGGACTGCAAATCTGATT +
Preference number: 5 (lower is better)
Translates to: NTFTLPAYVTGPLST*AGETIWRTGTANLI
Trigger: AATCAGATTTGCAGTCCCTGTCCTCCAAATAGTTTCTCCAGCGCAGGTGGACAAAGGACCTGTGACATATGCAGGCAGTGTAAAGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCGCTGGAGAAACTATTaGGAGGACAGGGACTGCAAA +
Preference number: 5 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLRWRNY*EDRDCK
Trigger: TTTGCAGTCCCTGTCCTCCAAATAGTTTCTCCAGCG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCATCCAAAGAACAGTTaGTCCAGGGTCGACAGATGC +
Preference number: 5 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLHPKNS*SRVDRC
Trigger: GCATCTGTCGACCCTGGACAAACTGTTCTTTGGATG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACCATCCAAAGAACAGTTaGTCCAGGGTCGACAGATGC +
Preference number: 5 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYHPKNS*SRVDRC
Trigger: GCATCTGTCGACCCTGGACAAACTGTTCTTTGGATG...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCAATGGTGCACCAGGTTaGGCCATGGGAGTTTGGCGG +
Preference number: 5 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSNGAPG*AMGVWR
Trigger: CCGCCAAACTCCCATGGCCAAACCTGGTGCACCATT...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAGGCGGTGATCCAAGATaGTACCACTGTACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIGGDPR*YHCTPA
Trigger: GGCTGGAGTACAGTGGTACAATCTTGGATCACCGCC...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACGCTGATCTTGAACTCTaGACCTCAGATGATCCACCC +
Preference number: 5 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYADLEL*TSDDPP
Trigger: GGGTGGATCATCTGAGGTCAAGAGTTCAAGATCAGC...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACAGAACTTTCCACTCCTaGGTCTTCAGGCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYRTFHS*VFRLLQ
Trigger: CTGCAGAAGCCTGAAGACCAAGGAGTGGAAAGTTCT...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615230.4
CDS-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCCAGTCACACTCTGCATaGCTGGTGGAGGAACACTCC +
Preference number: 5 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSQSHSA*LVEEHS
Trigger: GGAGTGTTCCTCCACCAGCAATGCAGAGTGTGACTG...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGTCCCAACAGCCCTATaGACTTCCATTTCACAGTTC +
Preference number: 5 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPVPTAL*TSISQF
Trigger: GAACTGTGAAATGGAAGTCAATAGGGCTGTTGGGAC...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAAGTGAACCTAGGAGTTaGAGACCAGCCTGTACAACA +
Preference number: 5 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPSEPRS*RPACTT
Trigger: TGTTGTACAGGCTGGTCTCAAACTCCTAGGTTCACT...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGAGTGAACCTAGGAGTTaGAGACCAGCCTGTACAACA +
Preference number: 5 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLSEPRS*RPACTT
Trigger: TGTTGTACAGGCTGGTCTCAAACTCCTAGGTTCACT...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCGGCGGTGATCCAAGATaGTACCACTGTACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSGGDPR*YHCTPA
Trigger: GGCTGGAGTACAGTGGTACAATCTTGGATCACCGCC...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGTATTCGCACCTAGCTTaGTTCCTGAAATGGCACCAG +
Preference number: 5 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLYSHLA*FLKWHQ
Trigger: CTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATA...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACCCAGTCTCTTTCTGTTaGTGGATAGTCAGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYPVSFC*WIVSSR
Trigger: CCTACTGCTGACTATCCACAAACAGAAAGAGACTGG...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCCAGTCTCTTTCTGTTaGTGGATAGTCAGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLPVSFC*WIVSSR
Trigger: CCTACTGCTGACTATCCACAAACAGAAAGAGACTGG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCCCTCGCTCCATTATCTaGGATACCCCAACCCTGTGG +
Preference number: 5 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSPRSII*DTPTLW
Trigger: CCACAGGGTTGGGGTATCCAAGATAATGGAGCGAGG...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS TCA 90 bp GGCAGTTACTACAAGGATCCTGCAATGATCTTGTCCTCTCAAAGTTaGGGACCAGCAACAGAGTGGCTACTATGTTGTAACAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: GSYYKDPAMILSSQS*GPATEWLLCCNSCF
Trigger: GAAACAGCTGTTACAACATAGTAGCCACTCTGTTGCTGGTCCTCAACTTTGAGAGGACAAGATCATTGCAGGATCCTTGTAGTAACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS-3UTR CAA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATACTTGTCCTCTCAAAGTaGAGGACCAGCAACAGAGTG +
Preference number: 5 (lower is better)
Translates to: GESWVLCRMVFLLLKAVILVLSK*RTSNRV
Trigger: CACTCTGTTGCTGGTCCTCAACTTTGAGAGGACAAG...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATATACTTTTCTGCCCTATaGATGCCTGGCTTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIYFSAL*MPGLAA
Trigger: TGCAGCCAAGCCAGGCATCAATAGGGCAGAAAAGTA...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTCAGGGTTTCGCCATGTaGCCAAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: FLLLKAVIADDSYFLASFQGFAM*PRLVSN
Trigger: GTTCGAGACCAGCCTTGGCAACATGGCGAAACCCTG...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS GCA 90 bp TTATTATCACAGAATGTACCAGCTGGGCAGTTACTACAAGGATCCTaGAATGATCTTGTCCTCTCAAAGTTGAGGACCAGCAACAGAGTG +
Preference number: 5 (lower is better)
Translates to: LLSQNVPAGQLLQGS*NDLVLSKLRTSNRV
Trigger: CACTCTGTTGCTGGTCCTCAACTTTGAGAGGACAAGATCATTGCAGGATCCTTGTAGTAACTGCCCAGCTGGTACATTCTGTGATAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS-3UTR CAA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCTCACAAATGTCACTCTaGAGATCTCAGGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFSQMSL*RSQGCR
Trigger: CCGGCAGCCCTGAGATCTCAAGAGTGACATTTGTGA...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCTATGTCACAGGTCCTTaGTCCACCTGCGCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFYVTGP*STCAGE
Trigger: TTCTCCAGCGCAGGTGGACAAAGGACCTGTGACATA...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAATGGTGTTCTTGCTTTaGAAAGCTGTGATAGCGGAT +
Preference number: 5 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPMVFLL*KAVIAD
Trigger: ATCCGCTATCACAGCTTTCAAAAGCAAGAACACCAT...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGGCACCTCGTGGCTTATaGTCATATGTCATATTAGCA +
Preference number: 5 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLAPRGL*SYVILA
Trigger: TGCTAATATGACATATGACAATAAGCCACGAGGTGC...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGCACAGGATAGACAAATaGACAATGGAACAGAACAGG +
Preference number: 5 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLHRIDK*TMEQNR
Trigger: CCTGTTCTGTTCCATTGTCAATTTGTCTATCCTGTG...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACTGCTTTGCCTACTATTaGGCAAGAATTGTACAGCCA +
Preference number: 5 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYCFAYY*ARIVQP
Trigger: TGGCTGTACAATTCTTGCCAAATAGTAGGCAAAGCA...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTCGTCTTGAGGGTTACTGAGATTCGAGATCCGATGGTTTCCTTGGAATGCAGTCCCACTGCTTCCATGTaGTTTGAATATATACAGGAG +
Preference number: 5 (lower is better)
Translates to: FVLRVTEIRDPMVSLECSPTASM*FEYIQE
Trigger: CTCCTGTATATATTCAAACAACATGGAAGCAGTGGG...ACTGCATTCCAAGGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474475.1
CDS-3UTR CAA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTTCACAAATGTCACTCTaGAGATCTCAGGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: FLLLKAVIADDSYFLASFSQMSL*RSQGCR
Trigger: CCGGCAGCCCTGAGATCTCAAGAGTGACATTTGTGA...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCCTTGTCCTCTCAAAGTaGAGGACCAGCAACAGAGTG +
Preference number: 5 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFLVLSK*RTSNRV
Trigger: CACTCTGTTGCTGGTCCTCAACTTTGAGAGGACAAG...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTTATGTCACAGGTCCTTaGTCCACCTGCGCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: FLLLKAVIADDSYFLASFYVTGP*STCAGE
Trigger: TTCTCCAGCGCAGGTGGACAAAGGACCTGTGACATA...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCATGTCAGTTCTTGACCTaGTTTACAATCCTGTTCACA +
Preference number: 5 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPCQFLT*FTILFT
Trigger: TGTGAACAGGATTGTAAACAAGGTCAAGAACTGACA...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAACAGCCATCTTCCTCTaGAGTAGTTTGTACTGGTCT +
Preference number: 5 (lower is better)
Translates to: GESWVLCRMVFLLLKAVITAIFL*SSLYWS
Trigger: AGACCAGTACAAACTACTCAAGAGGAAGATGGCTGT...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCGTCCCAACAGCCCTATaGACTTCCATTTCACAGTTC +
Preference number: 5 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSVPTAL*TSISQF
Trigger: GAACTGTGAAATGGAAGTCAATAGGGCTGTTGGGAC...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAATGCAAGACATGGAATaGGATCACTACCTCCCAACA +
Preference number: 5 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIMQDME*DHYLPT
Trigger: TGTTGGGAGGTAGTGATCCAATTCCATGTCTTGCAT...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCAAGACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCATTCCTAAGCTTTGCTTaGCCTACTATTTGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: EQDCLKQTNRQTKANGAPFLSFA*PTIWQE
Trigger: TTCTTGCCAAATAGTAGGCAAAGCAAAGCTTAGGAA...TGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTCTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GACTGTCTCAAGCAAACCAACAGACAAACAAAGGCAAATGGTGCACCAGGTTTGTTAAAGGCCAACTCATaGGCATTTAGAAAAGAACGT +
Preference number: 5 (lower is better)
Translates to: DCLKQTNRQTKANGAPGLLKANS*AFRKER
Trigger: ACGTTCTTTTCTAAATGCCAATGAGTTGGCCTTTAA...CAAACCTGGTGCACCATTTGCCTTTGTTTGTCTGTTGGTTTGCTTGAGACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATAGCACCTCGTGGCTTATaGTCATATGTCATATTAGCA +
Preference number: 5 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIAPRGL*SYVILA
Trigger: TGCTAATATGACATATGACAATAAGCCACGAGGTGC...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTTTCGGTGTGTAACCTAGGACACATGAGAGCCTCGCTCCATTATCTTGGATACTACTGCAGTAGACTATaGTTCAGAAATATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FSVCNLGHMRASLHYLGYYCSRL*FRNIFS
Trigger: GGAGAAGATATTTCTGAACAATAGTCTACTGCAGTA...GTATCCAAGATAATGGAGCGAGGCTCTCATGTGTCCTAGGTTACACACCGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTGCTGATCTTGAACTCTaGACCTCAGATGATCCACCC +
Preference number: 5 (lower is better)
Translates to: FLLLKAVIADDSYFLASFADLEL*TSDDPP
Trigger: GGGTGGATCATCTGAGGTCAAGAGTTCAAGATCAGC...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATATGTAGGATGGTGTTCTaGCTTTTGAAAGCTGTGATA +
Preference number: 5 (lower is better)
Translates to: GESWVLCRMVFLLLKAVICRMVF*LLKAVI
Trigger: TATCACAGCTTTCAAAAGCAAGAACACCATCCTACA...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GGGGAATCCTGGGTATTATGTAGGATGGTGTTCTTGCTTTTGAAAGCTGTGATACAACCACATTTGGGTTaGTTTGTTTCTGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: GESWVLCRMVFLLLKAVIQPHLG*FVSEKR
Trigger: CCTTTTCTCAGAAACAAACAAACCCAAATGTGGTTG...TATCACAGCTTTCAAAAGCAAGAACACCATCCTACATAATACCCAGGATTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp CATAGCTCTAGTTTCAATTCAGCAGCACTTATTTTCGTCTTGAGGGTTACTGAGGCACTTATTTTCGTCTaGAGGGTTACTGAGATTCGA +
Preference number: 5 (lower is better)
Translates to: HSSSFNSAALIFVLRVTEALIFV*RVTEIR
Trigger: TCGAATCTCAGTAACCCTCAAGACGAAAATAAGTGC...CTCAGTAACCCTCAAGACGAAAATAAGTGCTGCTGAATTGAAACTAGAGCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474475.1
CDS CCA 90 bp CAGAGTGGCTACTATGTTGTAACAGCTGTTTCCCATGATGAAATCTaGCACAGGTATGATACTAGCAAAGCTGATTCCAAGAGAATTTTA +
Preference number: 5 (lower is better)
Translates to: QSGYYVVTAVSHDEI*HRYDTSKADSKRIL
Trigger: TAAAATTCTCTTGGAATCAGCTTTGCTAGTATCATACCTGTGCCAGATTTCATCATGGGAAACAGCTGTTACAACATAGTAGCCACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCTGTCAGTTCTTGACCTaGTTTACAATCCTGTTCACA +
Preference number: 5 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSCQFLT*FTILFT
Trigger: TGTGAACAGGATTGTAAACAAGGTCAAGAACTGACA...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp AGACAAAAATATTCGCACCTAGCTTTGTTCCTGAAATGGCACCAGTATACTTCCTTCCTCTTGAGTAGTTaGTACTGGTCTCATAAATGG +
Preference number: 5 (lower is better)
Translates to: RQKYSHLALFLKWHQYTSFLLSS*YWSHKW
Trigger: CCATTTATGAGACCAGTACAAACTACTCAAGAGGAA...GGAAGTATACTGGTGCCATTTCAGGAACAAAGCTAGGTGCGAATATTTTTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCATGGTGTTCTTGCTTTaGAAAGCTGTGATAGCGGAT +
Preference number: 5 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFMVFLL*KAVIAD
Trigger: ATCCGCTATCACAGCTTTCAAAAGCAAGAACACCAT...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTATGCAAGACATGGAATaGGATCACTACCTCCCAACA +
Preference number: 5 (lower is better)
Translates to: FLLLKAVIADDSYFLASFMQDME*DHYLPT
Trigger: TGTTGGGAGGTAGTGATCCAATTCCATGTCTTGCAT...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCCACAGGATAGACAAATaGACAATGGAACAGAACAGG +
Preference number: 5 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFHRIDK*TMEQNR
Trigger: CCTGTTCTGTTCCATTGTCAATTTGTCTATCCTGTG...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp CTTATTTTCGTCTTGAGGGTTACTGAGATTCGAGATCCGATGGTTTCCTTGGAACTGCTTCCATGTTGTTaGAATATATACAGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: LIFVLRVTEIRDPMVSLELLPCC*NIYRSF
Trigger: GAAACTCCTGTATATATTCAAACAACATGGAAGCAG...TTCCAAGGAAACCATCGGATCTCGAATCTCAGTAACCCTCAAGACGAAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474475.1
CDS-3UTR CAA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCTTCCTCTTGAGTAGTTaGTACTGGTCTCATAAATGG +
Preference number: 5 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFFLLSS*YWSHKW
Trigger: CCATTTATGAGACCAGTACAAACTACTCAAGAGGAA...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp GAGCTCACAGGTGTTAATTTTCTCACTGTACTTCATACCTATCATATGCAGTTCTACTGCAGTAGACTATaGTTCAGAAATATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ELTGVNFLTVLHTYHMQFYCSRL*FRNIFS
Trigger: GGAGAAGATATTTCTGAACAATAGTCTACTGCAGTA...GAACTGCATATGATAGGTATGAAGTACAGTGAGAAAATTAACACCTGTGAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTCAACCACATTTGGGTTaGTTTGTTTCTGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: FLLLKAVIADDSYFLASFQPHLG*FVSEKR
Trigger: CCTTTTCTCAGAAACAAACAAACCCAAATGTGGTTG...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS-3UTR CAA 90 bp TTCTTGCTTTTGAAAGCTGTGATAGCGGATGACTCATATTTCCTTGCTTCTTTTTTAAAGGCCAACTCATaGGCATTTAGAAAAGAACGT +
Preference number: 5 (lower is better)
Translates to: FLLLKAVIADDSYFLASFLKANS*AFRKER
Trigger: ACGTTCTTTTCTAAATGCCAATGAGTTGGCCTTTAA...AAAAGAAGCAAGGAAATATGAGTCATCCGCTATCACAGCTTTCAAAAGCAAGAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS TCA 72 bp GCTCGAGAGGACTTCAGGTCAAACACAGGAGTGCGGTaGCTCAGCCAGGGGCGGGGTCTCATGGGAAATTCC +
Preference number: 6 (lower is better)
Translates to: AREDFRSNTGVR*LSQGRGLMGNS
Trigger: GGAATTTCCCATGAGACCCCGCCCCTGGCTGAGTCACCGCACTCCTGTGTTTGACCTGAAGTCCTCTCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615230.4
ENST00000674210.1
CDS GCA 72 bp CCCCAGGCAGTGAAACCCTGGAGTGCAGTCACACTCTaGATTGCTGGTGGAGGAACACTCCTTCCTGGTCCT +
Preference number: 6 (lower is better)
Translates to: PQAVKPWSAVTL*IAGGGTLLPGP
Trigger: AGGACCAGGAAGGAGTGTTCCTCCACCAGCAATGCAGAGTGTGACTGCACTCCAGGGTTTCACTGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS GCA 72 bp TGCTGCATCCTGCCCCCAGGCAGTGAAACCCTGGAGTaGAGTCACACTCTGCATTGCTGGTGGAGGAACACT +
Preference number: 6 (lower is better)
Translates to: CCILPPGSETLE*SHTLHCWWRNT
Trigger: AGTGTTCCTCCACCAGCAATGCAGAGTGTGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGGATGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS CCA 72 bp ACACATGCTGCATCCTGCCCCCAGGCAGTGAAACCCTaGAGTGCAGTCACACTCTGCATTGCTGGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: THAASCPQAVKP*SAVTLCIAGGG
Trigger: TCCTCCACCAGCAATGCAGAGTGTGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377507.8
ENST00000492571.1
ENST00000615230.4
ENST00000674210.1
CDS TCA 72 bp TCCTGTTCACACATGCTGCATCCTGCCCCCAGGCAGTaGAACCCTGGAGTGCAGTCACACTCTGCATTGCTG +
Preference number: 6 (lower is better)
Translates to: SCSHMLHPAPRQ*NPGVQSHSALL
Trigger: CAGCAATGCAGAGTGTGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGTGAACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377507.8
ENST00000492571.1
ENST00000615230.4
ENST00000674210.1
CDS GCA 72 bp ACACTGCCTGCATATGTCACAGGTCCTTTGTCCACCTaGGCTGGAGAAACTATTTGGAGGACAGGGACTGCA +
Preference number: 6 (lower is better)
Translates to: TLPAYVTGPLST*AGETIWRTGTA
Trigger: TGCAGTCCCTGTCCTCCAAATAGTTTCTCCAGCGCAGGTGGACAAAGGACCTGTGACATATGCAGGCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS GCA 72 bp ACCTTGTTTACAATCCTGTTCACACATGCTGCATCCTaGCCCCAGGCAGTGAAACCCTGGAGTGCAGTCACA +
Preference number: 6 (lower is better)
Translates to: TLFTILFTHAAS*PQAVKPWSAVT
Trigger: TGTGACTGCACTCCAGGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGTGAACAGGATTGTAAACAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377507.8
ENST00000492571.1
ENST00000615230.4
ENST00000674210.1
CDS GCA 72 bp GTTCTTGACCTTGTTTACAATCCTGTTCACACATGCTaGATCCTGCCCCCAGGCAGTGAAACCCTGGAGTGC +
Preference number: 6 (lower is better)
Translates to: VLDLVYNPVHTC*ILPPGSETLEC
Trigger: GCACTCCAGGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGTGAACAGGATTGTAAACAAGGTCAAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377507.8
ENST00000492571.1
ENST00000615230.4
ENST00000674210.1
CDS CAA 90 bp GGTCCTGAAAACACCTTTACACTGCCTGCATATGTCACAGGTCCTTaGTCCACCTGCGCTGGAGAAACTATTTGGAGGACAGGGACTGCA +
Preference number: 6 (lower is better)
Translates to: GPENTFTLPAYVTGP*STCAGETIWRTGTA
Trigger: TGCAGTCCCTGTCCTCCAAATAGTTTCTCCAGCGCAGGTGGACAAAGGACCTGTGACATATGCAGGCAGTGTAAAGGTGTTTTCAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS GCA 72 bp CTGGTCTCACAAATGTCACTCTTGAGATCTCAGGGCTaGCGGAGAACTTTCCACTCCTTGGTCTTCAGGCTT +
Preference number: 6 (lower is better)
Translates to: LVSQMSLLRSQG*RRTFHSLVFRL
Trigger: AAGCCTGAAGACCAAGGAGTGGAAAGTTCTCCGGCAGCCCTGAGATCTCAAGAGTGACATTTGTGAGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS GCA 72 bp TCAGTTCTTGACCTTGTTTACAATCCTGTTCACACATaGTGCATCCTGCCCCCAGGCAGTGAAACCCTGGAG +
Preference number: 6 (lower is better)
Translates to: SVLDLVYNPVHT*CILPPGSETLE
Trigger: CTCCAGGGTTTCACTGCCTGGGGGCAGGATGCAGCATGTGTGAACAGGATTGTAAACAAGGTCAAGAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377507.8
ENST00000492571.1
ENST00000615230.4
ENST00000674210.1
CDS CCA 72 bp GCCTGCATATGTCACAGGTCCTTTGTCCACCTGCGCTaGAGAAACTATTTGGAGGACAGGGACTGCAAATCT +
Preference number: 6 (lower is better)
Translates to: ACICHRSFVHLR*RNYLEDRDCKS
Trigger: AGATTTGCAGTCCCTGTCCTCCAAATAGTTTCTCCAGCGCAGGTGGACAAAGGACCTGTGACATATGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS TCA 72 bp TGTACCAGCTGGGCAGTTACTACAAGGATCCTGCAATaGTCTTGTCCTCTCAAAGTTGAGGACCAGCAACAG +
Preference number: 6 (lower is better)
Translates to: CTSWAVTTRILQ*SCPLKVEDQQQ
Trigger: CTGTTGCTGGTCCTCAACTTTGAGAGGACAAGATCATTGCAGGATCCTTGTAGTAACTGCCCAGCTGGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS GCA 72 bp CAGAATGTACCAGCTGGGCAGTTACTACAAGGATCCTaGAATGATCTTGTCCTCTCAAAGTTGAGGACCAGC +
Preference number: 6 (lower is better)
Translates to: QNVPAGQLLQGS*NDLVLSKLRTS
Trigger: GCTGGTCCTCAACTTTGAGAGGACAAGATCATTGCAGGATCCTTGTAGTAACTGCCCAGCTGGTACATTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS CAA 72 bp AACACCTTTACACTGCCTGCATATGTCACAGGTCCTTaGTCCACCTGCGCTGGAGAAACTATTTGGAGGACA +
Preference number: 6 (lower is better)
Translates to: NTFTLPAYVTGP*STCAGETIWRT
Trigger: TGTCCTCCAAATAGTTTCTCCAGCGCAGGTGGACAAAGGACCTGTGACATATGCAGGCAGTGTAAAGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS CAA 90 bp TGCATATGTCACAGGTCCTTTGTCCACCTGCGCTGGAGAAACTATTaGGAGGACAGGGACTGCAAATCTGATTCCTGTTATTATCACAGA +
Preference number: 6 (lower is better)
Translates to: CICHRSFVHLRWRNY*EDRDCKSDSCYYHR
Trigger: TCTGTGATAATAACAGGAATCAGATTTGCAGTCCCTGTCCTCCAAATAGTTTCTCCAGCGCAGGTGGACAAAGGACCTGTGACATATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS TCA 72 bp TACAAGGATCCTGCAATGATCTTGTCCTCTCAAAGTTaGGGACCAGCAACAGAGTGGCTACTATGTTGTAAC +
Preference number: 6 (lower is better)
Translates to: YKDPAMILSSQS*GPATEWLLCCN
Trigger: GTTACAACATAGTAGCCACTCTGTTGCTGGTCCTCAACTTTGAGAGGACAAGATCATTGCAGGATCCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS TCA 72 bp GAACAGTTTGTCCAGGGTCGACAGATGCCACGTTTCTaGTCGTTAAATGTCCCAAAGCAACAGTCTTTACAA +
Preference number: 6 (lower is better)
Translates to: EQFVQGRQMPRF*SLNVPKQQSLQ
Trigger: TTGTAAAGACTGTTGCTTTGGGACATTTAACGATCAGAAACGTGGCATCTGTCGACCCTGGACAAACTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS TCA 72 bp CTGATGTTTGTCCAGGGTCGACAGATGCCACGTTTCTaGTCGTTAAATGTCCCAAAGCAACAGTCTTTACAA +
Preference number: 6 (lower is better)
Translates to: LMFVQGRQMPRF*SLNVPKQQSLQ
Trigger: TTGTAAAGACTGTTGCTTTGGGACATTTAACGATCAGAAACGTGGCATCTGTCGACCCTGGACAAACATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492571.1
CDS CCA 72 bp TACTATGTTGTAACAGCTGTTTCCCATGATGAAATCTaGCACAGGTATGATACTAGCAAAGCTGATTCCAAG +
Preference number: 6 (lower is better)
Translates to: YYVVTAVSHDEI*HRYDTSKADSK
Trigger: CTTGGAATCAGCTTTGCTAGTATCATACCTGTGCCAGATTTCATCATGGGAAACAGCTGTTACAACATAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377507.8
ENST00000615230.4
ENST00000674210.1
CDS CCA 72 bp GCAGCTACAGCCATCTTCCTCTTGAGTAGTTTGTACTaGTCTCATAAATGGTTGTTTGAATATATACAGGAG +
Preference number: 6 (lower is better)
Translates to: AATAIFLLSSLY*SHKWLFEYIQE
Trigger: CTCCTGTATATATTCAAACAACCATTTATGAGACCAGTACAAACTACTCAAGAGGAAGATGGCTGTAGCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4
CDS CAA 72 bp AAATCGGCAGCTACAGCCATCTTCCTCTTGAGTAGTTaGTACTGGTCTCATAAATGGTTGTTTGAATATATA +
Preference number: 6 (lower is better)
Translates to: KSAATAIFLLSS*YWSHKWLFEYI
Trigger: TATATATTCAAACAACCATTTATGAGACCAGTACAAACTACTCAAGAGGAAGATGGCTGTAGCTGCCGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377507.8
ENST00000615230.4