Pregenerated sensors for TNFRSF4 (Homo sapiens)
Ensembl gene IDs: ENSG00000186827Ensembl transcript IDs: ENST00000379236.4, ENST00000453580.1, ENST00000497869.5
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGGGCAGGCGGCCTaGACCTGCCCTGCTCGCCCAGCAGACCCTCCGGGCTCCAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: RTVQSWPRSVAGQAA*TCPARPADPPGSSL Trigger: CAGGCTGGAGCCCGGAGGGTCTGCTGGGCGAGCAGGGCAGGTGCAGGCCGCCTGCCCCGCCACGCTCCTGGGCCAACTCTGCACCGTTCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| 3UTR GCA 90 bp | ATACGTAAGCAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTaGAGAGTTGGCCCAGGAGCGTGGCGGGGCAGGCGGCCTGCACCT | + |
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Preference number: 1 (lower is better) Translates to: IRKQRAGGSHRHLER*RVGPGAWRGRRPAP Trigger: AGGTGCAGGCCGCCTGCCCCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTGCTTACGTAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| 3UTR GCA 90 bp | CCCGTCTGCCAAGGTTTTTATTGTGGTCCCGCGGGGCAGGAGGTATaGATGGCATACGTAAGCAGAGAGCCGGAGGCAGCCATCGGCACC | + |
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Preference number: 1 (lower is better) Translates to: PVCQGFYCGPAGQEV*MAYVSREPEAAIGT Trigger: GGTGCCGATGGCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAAACCTTGGCAGACGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| 3UTR GCA 72 bp | CAGAGTTGGCCCAGGAGCGTGGCGGGGCAGGCGGCCTaGACCTGCCCTGCTCGCCCAGCAGACCCTCCGGGC | + |
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Preference number: 3 (lower is better) Translates to: QSWPRSVAGQAA*TCPARPADPPG Trigger: GCCCGGAGGGTCTGCTGGGCGAGCAGGGCAGGTGCAGGCCGCCTGCCCCGCCACGCTCCTGGGCCAACTCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| 3UTR GCA 72 bp | CAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTaGAGAGTTGGCCCAGGAGCGTGGCGGGGCAGGCGG | + |
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Preference number: 3 (lower is better) Translates to: QRAGGSHRHLER*RVGPGAWRGRR Trigger: CCGCCTGCCCCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| 3UTR GCA 72 bp | CAAGGTTTTTATTGTGGTCCCGCGGGGCAGGAGGTATaGATGGCATACGTAAGCAGAGAGCCGGAGGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: QGFYCGPAGQEV*MAYVSREPEAA Trigger: GGCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAAACCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | ACCTGCCCTGCTCGCCCAGCAGACCCTCCGGGCTCCAGCCTGGCGGGGCCCAGCTGTCCAGGGGCTGGGTaGCCGCCCGGCAGCGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TCPARPADPPGSSLAGPSCPGAG*PPGSGR Trigger: TCTGCCGCTGCCGGGCGGGCACCCAGCCCCTGGACA...GCTGGGCCCCGCCAGGCTGGAGCCCGGAGGGTCTGCTGGGCGAGCAGGGCAGGT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | ACCTGCCCTGCTCGCCCAGCAGACCCTCCGGGCTCCAGCCTGGCGGGGCCCAGCTTGGCCAGGGTGGAGTaGGCGTCGGCCTGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: TCPARPADPPGSSLAGPSLARVE*ASACSS Trigger: AGAGGAGCAGGCCGACGCCCACTCCACCCTGGCCAA...GCTGGGCCCCGCCAGGCTGGAGCCCGGAGGGTCTGCTGGGCGAGCAGGGCAGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | ACCTGCCCTGCTCGCCCAGCAGACCCTCCGGGCTCCAGCCTGGCGGGGCCCAGCAGAACGGTGCAGAGTTaGCCCAGGAGCGTGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: TCPARPADPPGSSLAGPSRTVQS*PRSVAG Trigger: CCCCGCCACGCTCCTGGGCCAACTCTGCACCGTTCT...GCTGGGCCCCGCCAGGCTGGAGCCCGGAGGGTCTGCTGGGCGAGCAGGGCAGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | ACCTGCCCTGCTCGCCCAGCAGACCCTCCGGGCTCCAGCCTGGCGGGGCCCAGCCTATTGCTGGCCGGCTaGAGGGTGTGCTTCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TCPARPADPPGSSLAGPSLLLAG*RVCFPA Trigger: GGCTGGGAAGCACACCCTGCAGCCGGCCAGCAATAG...GCTGGGCCCCGCCAGGCTGGAGCCCGGAGGGTCTGCTGGGCGAGCAGGGCAGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGCGGCACACCGTGTTCTaGGAGCGGCTGCAGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GGSHRHLERCRVGPGAWRRHTVF*ERLQRL Trigger: GAGCCGCTGCAGCCGCTCCCAGAACACGGTGTGCCG...CCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | AGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGGGGGCAGCACCGGTCGTTaGTGGGGTAGGTGTCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: RQPSAPRTVQSWPRSVAGGSTGR*WGRCPR Trigger: TCGGGGACACCTACCCCAGCAACGACCGGTGCTGCC...CCCCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCT 68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGTCCCGTTGCCTGGCCTaGACTCGTGGCAGCACCGGT | + |
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Preference number: 4 (lower is better) Translates to: GGSHRHLERCRVGPGAWRSRCLA*TRGSTG Trigger: ACCGGTGCTGCCACGAGTGCAGGCCAGGCAACGGGA...CCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | AGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGGGGAGTGGGCGTCGGCCTaGTCCTCTTGGATGGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RQPSAPRTVQSWPRSVAGEWASA*SSWMGV Trigger: GACCCCCATCCAAGAGGAGCAGGCCGACGCCCACTC...CCCCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | AGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGGGCAGGGTGTCCCCGACACAGTaGAGCCCCGTCACGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SHRHLERCRVGPGAWRGRVSPTQ*SPVTVL Trigger: GAGCACCGTGACGGGGCTCCACTGTGTCGGGGACAC...CCTGCCCCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | CCCGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGCCGGAGGCAGCCCCTCCACGGGCCGGGTaGAGGGTCCCTGTGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PAGQEVCMAYVSREPEAAPPRAG*RVPVRF Trigger: GAACCTCACAGGGACCCTCCACCCGGCCCGTGGAGG...GGCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | CGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGCCGGAGGCAGCCATGGAGCCCCGTCACGGTaGTCAGCCCCAGGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RGAGGMHGIRKQRAGGSHGAPSR*SAPGPG Trigger: TCCTGGGCCTGGGGCTGAGCACCGTGACGGGGCTCC...ATGGCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | CCCGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGCCGGAGGCAGCCGCCGGCTGCAGGGTGTaGTTCCCAGCCAAGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PAGQEVCMAYVSREPEAAAGCRV*FPAKVQ Trigger: CTGCACCTTGGCTGGGAAGCACACCCTGCAGCCGGC...GGCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGCCTGGCCTGCACTCGTaGCAGCACCGGTCGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: AESRRQPSAPRTVQSWPRPGLHS*QHRSLL Trigger: CAGCAACGACCGGTGCTGCCACGAGTGCAGGCCAGG...CCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGGGCCTGGTTGTCGCCTaGGGAGAAGTGCCCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AESRRQPSAPRTVQSWPRGLVVA*GEVPWR Trigger: CCTCCAGGGCACTTCTCCCCAGGCGACAACCAGGCC...CCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | GCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCAGGGCTTGCAGGCCTaGTTGTCGCCTGGGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: AGGSHRHLERCRVGPGAWQGLQA*LSPGEK Trigger: CTTCTCCCCAGGCGACAACCAGGCCTGCAAGCCCTG...CCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGCGTCCGAGCTATTGCTaGCCGGCTGCAGGGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GGSHRHLERCRVGPGAWRRPSYC*PAAGCA Trigger: AGCACACCCTGCAGCCGGCCAGCAATAGCTCGGACG...CCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | GCAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGTGTTCTGGGAGCGGCTaGAGCGGCTCACCATCCCGT | + |
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Preference number: 4 (lower is better) Translates to: AESRRQPSAPRTVQSWPRCSGSG*SGSPSR Trigger: ACGGGATGGTGAGCCGCTGCAGCCGCTCCCAGAACA...CCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGGTGGCCGTGCACAGCTaGTTCCGCTCACTCCCACTT | + |
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Preference number: 4 (lower is better) Translates to: GGSHRHLERCRVGPGAWRVAVHS*FRSLPL Trigger: AAGTGGGAGTGAGCGGAAGCAGCTGTGCACGGCCAC...CCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGTGTCCTGTGTGGCCGTaGACAGCTGCTTCCGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: GGSHRHLERCRVGPGAWRCPVWP*TAASAH Trigger: GTGAGCGGAAGCAGCTGTGCACGGCCACACAGGACA...CCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | GCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGAGACTGTGTCCTGTGTaGCCGTGCACAGCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: AGGSHRHLERCRVGPGAWRLCPV*PCTAAS Trigger: GGAAGCAGCTGTGCACGGCCACACAGGACACAGTCT...CCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR TCA 90 bp | GGCATACGTAAGCAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGGTGGAGGGTCCCTGTaGGGTTCTGGGCCAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GIRKQRAGGSHRHLERCRGGGSL*GSGPGF Trigger: GAAGCCTGGCCCAGAACCTCACAGGGACCCTCCACC...TCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTGCTTACGTATGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | TCCCGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGCCGGAGGCAGCTCGGCCTGCTCCTCTTaGATGGGGGTCCGGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: SRGAGGMHGIRKQRAGGSSACSS*MGVRKL Trigger: CAGTTTCCGGACCCCCATCCAAGAGGAGCAGGCCGA...GCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR TCA 90 bp | TCCCGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGCCGGAGGCAGCGCTCACTCCCACTTCTaGGGTTACACCACGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SRGAGGMHGIRKQRAGGSAHSHF*GYTTCR Trigger: CCTGCACGTGGTGTAACCTCAGAAGTGGGAGTGAGC...GCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | GGCATACGTAAGCAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGAAGCACCGGTCGTTGCTaGGGTAGGTGTCCCCGACAC | + |
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Preference number: 4 (lower is better) Translates to: GIRKQRAGGSHRHLERCRSTGRC*GRCPRH Trigger: GTGTCGGGGACACCTACCCCAGCAACGACCGGTGCT...TCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTGCTTACGTATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | GGCATACGTAAGCAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGACACCATCCCGTTGCCTaGCCTGCACTCGTGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GIRKQRAGGSHRHLERCRHHPVA*PALVAA Trigger: TGCTGCCACGAGTGCAGGCCAGGCAACGGGATGGTG...TCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTGCTTACGTATGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | GGCATACGTAAGCAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGAAGATCTTGGCCAGGGTaGAGTGGGCGTCGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GIRKQRAGGSHRHLERCRRSWPG*SGRRPA Trigger: AGCAGGCCGACGCCCACTCCACCCTGGCCAAGATCT...TCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTGCTTACGTATGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | TCCCGTCTGCCAAGGTTTTTATTGTGGTCCCGCGGGGCAGGAGGTATGCATGGCCGGCACCTAGAACGGTaGAGAGTTGGCCCAGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: SRLPRFLLWSRGAGGMHGRHLER*RVGPGA Trigger: CGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCG...GCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAAACCTTGGCAGACGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | TCCCGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGCCGGAGGCAGCCCAAGGTTTTTATTGTaGTCCCGCGGGGCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: SRGAGGMHGIRKQRAGGSPRFLL*SRGAGG Trigger: ACCTCCTGCCCCGCGGGACCACAATAAAAACCTTGG...GCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | GCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGCCGGAGGCAGCCATCCCTGTCCTCACAGATTaGGTCCGAGCTATTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AGQEVCMAYVSREPEAAIPVLTD*VRAIAG Trigger: GCCAGCAATAGCTCGGACGCAATCTGTGAGGACAGG...GATGGCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | ATACGTAAGCAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGTCCCTGTGAGGTTCTaGGCCAGGCTTCAGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: IRKQRAGGSHRHLERCRVVPVRF*ARLQWA Trigger: AGCCCACTGAAGCCTGGCCCAGAACCTCACAGGGAC...AACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTGCTTACGTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | ATACGTAAGCAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTCCTGCTCCTCTTGGATaGGGGTCCGGAAACTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: IRKQRAGGSHRHLERCRVPAPLG*GSGNCL Trigger: GAGGCAGTTTCCGGACCCCCATCCAAGAGGAGCAGG...AACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTGCTTACGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | GTCTGCCAAGGTTTTTATTGTGGTCCCGCGGGGCAGGAGGTATGCATGGCATACTTGCGTCCGAGCTATTaGTGGCCGGCTGCAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VCQGFYCGPAGQEVCMAYLRPSY*WPAAGC Trigger: ACACCCTGCAGCCGGCCAGCAATAGCTCGGACGCAA...GTATGCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAAACCTTGGCAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | TCCCGTCTGCCAAGGTTTTTATTGTGGTCCCGCGGGGCAGGAGGTATGCATGGCGCGGGGCAGGAGGTATaGATGGCATACGTAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SRLPRFLLWSRGAGGMHGAGQEV*MAYVSR Trigger: TCTGCTTACGTATGCCATGCATACCTCCTGCCCCGC...GCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAAACCTTGGCAGACGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | TTTTATTGTGGTCCCGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGGCCCAGGTCAGATCTTaGCCAGGGTGGAGTGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: FYCGPAGQEVCMAYVSREAQVRS*PGWSGR Trigger: ACGCCCACTCCACCCTGGCCAAGATCTGACCTGGGC...CTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR TCA 90 bp | GTCTGCCAAGGTTTTTATTGTGGTCCCGCGGGGCAGGAGGTATGCATGGCATACTGCACGGCTTGGAGCTaGCCACGTCGTTGTAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VCQGFYCGPAGQEVCMAYCTAWS*PRRCRS Trigger: GCTTCTACAACGACGTGGTCAGCTCCAAGCCGTGCA...GTATGCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAAACCTTGGCAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | AGGTTTTTATTGTGGTCCCGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGTTGGTCCAGGGCTTaGAGGCCTGGTTGTCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: RFLLWSRGAGGMHGIRKQSWSRA*RPGCRL Trigger: CAGGCGACAACCAGGCCTGCAAGCCCTGGACCAACT...CTGCTTACGTATGCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR GCA 90 bp | TTTTATTGTGGTCCCGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGGCTTCCCAGCCAAGGTaGAGTTGGTCCAGGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: FYCGPAGQEVCMAYVSREASQPR*SWSRAC Trigger: GCAAGCCCTGGACCAACTGCACCTTGGCTGGGAAGC...CTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS-3UTR CCA 90 bp | CAAGGTTTTTATTGTGGTCCCGCGGGGCAGGAGGTATGCATGGCATACGTAAGCCAGCCAAGGTGCAGTTaGTCCAGGGCTTGCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QGFYCGPAGQEVCMAYVSQPRCS*SRACRP Trigger: AGGCCTGCAAGCCCTGGACCAACTGCACCTTGGCTG...GCTTACGTATGCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAAACCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
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| CDS CCA 90 bp | GGATGGCGGCAACCGCACGGCCCCCGGGGACCTCCACGGGCCGGGTaGAGGGTCCCTGTGAGGTTCTGGGCCAGGCTTCAGTGGGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GWRQPHGPRGPPRAG*RVPVRFWARLQWAG Trigger: TCCAGCCCACTGAAGCCTGGCCCAGAACCTCACAGGGACCCTCCACCCGGCCCGTGGAGGTCCCCGGGGGCCGTGCGGTTGCCGCCATCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
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| CDS TCA 90 bp | CGCACGGCCCCCGGGGACCTCCACGGGCCGGGTGGAGGGTCCCTGTaGGGTTCTGGGCCAGGCTTCAGTGGGCTGGACAGTGATGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: RTAPGDLHGPGGGSL*GSGPGFSGLDSDGP Trigger: AGGCCCATCACTGTCCAGCCCACTGAAGCCTGGCCCAGAACCTCACAGGGACCCTCCACCCGGCCCGTGGAGGTCCCCGGGGGCCGTGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
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| CDS GCA 90 bp | AGAAGCCCGGCCCGCACGGACGGCACACCGTGTTCTGGGAGCGGCTaGAGCGGCTCACCATCCCGTTGCCTGGCCTGCACTCGTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSPARTDGTPCSGSG*SGSPSRCLACTRGS Trigger: GCTGCCACGAGTGCAGGCCAGGCAACGGGATGGTGAGCCGCTGCAGCCGCTCCCAGAACACGGTGTGCCGTCCGTGCGGGCCGGGCTTCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS GCA 90 bp | GCTGGGTGCCCGCCCGGCAGCGGCAGACTGTGTCCTGTGTGGCCGTaGACAGCTGCTTCCGCTCACTCCCACTTCCTGAGCAGGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGCPPGSGRLCPVWP*TAASAHSHFLSRGR Trigger: CCGGCCCCTGCTCAGGAAGTGGGAGTGAGCGGAAGCAGCTGTGCACGGCCACACAGGACACAGTCTGCCGCTGCCGGGCGGGCACCCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497869.5 |
||
| CDS CCA 90 bp | CCTGGCGGGGCCCAGCGTCCACCTTGGTGGGCCCAGGTCAGATCTTaGCCAGGGTGGAGTGGGCGTCGGCCTGCTCCTCTTGGATGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGGAQRPPWWAQVRS*PGWSGRRPAPLGWG Trigger: CCCCCATCCAAGAGGAGCAGGCCGACGCCCACTCCACCCTGGCCAAGATCTGACCTGGGCCCACCAAGGTGGACGCTGGGCCCCGCCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS CCA 90 bp | CCAGGGGCTGGGTGCCCGCCCGGCAGCGGCAGACTGTGTCCTGTGTaGCCGTGCACAGCTGCTTCCGCTCACTCCCACTTCTGCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGAGCPPGSGRLCPV*PCTAASAHSHFCSG Trigger: GCCTGAGCAGAAGTGGGAGTGAGCGGAAGCAGCTGTGCACGGCCACACAGGACACAGTCTGCCGCTGCCGGGCGGGCACCCAGCCCCTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453580.1 |
||
| CDS CCA 90 bp | GCTGTGGACAGGGTCCTCAGGAAGCGTGGGCACTGGAGGACAGGTTaGCCTCCCCACCACACAGAGGGCCGTGGGCAGGGGTCTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVDRVLRKRGHWRTG*PPHHTEGRGQGSAA Trigger: GGCCGCAGACCCCTGCCCACGGCCCTCTGTGTGGTGGGGAGGCCAACCTGTCCTCCAGTGCCCACGCTTCCTGAGGACCCTGTCCACAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497869.5 |
||
| CDS CCA 90 bp | CCAGGGGCTGGGTGCCCGCCCGGCAGCGGCAGACTGTGTCCTGTGTaGCCGTGCACAGCTGCTTCCGCTCACTCCCACTTCCTGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGAGCPPGSGRLCPV*PCTAASAHSHFLSR Trigger: CCTGCTCAGGAAGTGGGAGTGAGCGGAAGCAGCTGTGCACGGCCACACAGGACACAGTCTGCCGCTGCCGGGCGGGCACCCAGCCCCTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497869.5 |
||
| CDS GCA 90 bp | CCCGCCCGGCAGCGGCAGACTGTGTCCTGTGTGGCCGTGCACAGCTaGTTCCGCTCACTCCCACTTCTGCTCAGGCCAGCAAGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PARQRQTVSCVAVHS*FRSLPLLLRPARPG Trigger: GCCTGGCCTTGCTGGCCTGAGCAGAAGTGGGAGTGAGCGGAAGCAGCTGTGCACGGCCACACAGGACACAGTCTGCCGCTGCCGGGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453580.1 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGCGGCTCACCATCCCGTaGCCTGGCCTGCACTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGSHRHLERCRVGPGAWRRLTIP*PGLHSW Trigger: CCACGAGTGCAGGCCAGGCAACGGGATGGTGAGCCG...CCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGGGGGCCCAGCGTCCACCTaGGTGGGCCCAGGTCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: RQPSAPRTVQSWPRSVAGGPAST*VGPGQI Trigger: GATCTGACCTGGGCCCACCAAGGTGGACGCTGGGCC...CCCCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCT 69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS GCA 90 bp | AGGGGGCACAGTCAACTCCAGGCTTGTAGCTGTCCAGGGGCTGGGTaGCCGCCCGGCAGCGGCAGACTGTGTCCTGTGTGGCCGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RGHSQLQACSCPGAG*PPGSGRLCPVWPCT Trigger: TGTGCACGGCCACACAGGACACAGTCTGCCGCTGCCGGGCGGGCACCCAGCCCCTGGACAGCTACAAGCCTGGAGTTGACTGTGCCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000379236.4 ENST00000453580.1 ENST00000497869.5 |
||
| CDS GCA 90 bp | GCTGGGTGCCCGCCCGGCAGCGGCAGACTGTGTCCTGTGTGGCCGTaGACAGCTGCTTCCGCTCACTCCCACTTCTGCTCAGGCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AGCPPGSGRLCPVWP*TAASAHSHFCSGQQ Trigger: TTGCTGGCCTGAGCAGAAGTGGGAGTGAGCGGAAGCAGCTGTGCACGGCCACACAGGACACAGTCTGCCGCTGCCGGGCGGGCACCCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453580.1 |
||
| CDS CCA 90 bp | CCATCCCGTTGCCTGGCCTGCACTCGTGGCAGCACCGGTCGTTGCTaGGGTAGGTGTCCCCGACACAGTGGAGCCCCGTCACGGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSRCLACTRGSTGRC*GRCPRHSGAPSRCS Trigger: TGAGCACCGTGACGGGGCTCCACTGTGTCGGGGACACCTACCCCAGCAACGACCGGTGCTGCCACGAGTGCAGGCCAGGCAACGGGATGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS CCA 90 bp | GCCCAGCGTCCACCTTGGTGGGCCCAGGTCAGATCTTGGCCAGGGTaGAGTGGGCGTCGGCCTGCTCCTCTTGGATGGGGGTCCGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AQRPPWWAQVRSWPG*SGRRPAPLGWGSGN Trigger: GTTTCCGGACCCCCATCCAAGAGGAGCAGGCCGACGCCCACTCCACCCTGGCCAAGATCTGACCTGGGCCCACCAAGGTGGACGCTGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS GCA 90 bp | CCCGCCCGGCAGCGGCAGACTGTGTCCTGTGTGGCCGTGCACAGCTaGTTCCGCTCACTCCCACTTCTGAGGTTACACCACGTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PARQRQTVSCVAVHS*FRSLPLLRLHHVQG Trigger: GCCCTGCACGTGGTGTAACCTCAGAAGTGGGAGTGAGCGGAAGCAGCTGTGCACGGCCACACAGGACACAGTCTGCCGCTGCCGGGCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS GCA 90 bp | CGCTGTGGTTTGAGGTTCGTTTCTGCGGCTGTGGGAGCCCCATGCTaGTGCGTGGGAATGTGGGTGCCAGGCTGCCGCCCCCTGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RCGLRFVSAAVGAPC*CVGMWVPGCRPLCW Trigger: CCAGCACAGGGGGCGGCAGCCTGGCACCCACATTCCCACGCAGCAGCATGGGGCTCCCACAGCCGCAGAAACGAACCTCAAACCACAGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000497869.5 |
||
| CDS CCA 90 bp | GCGTCCACCTTGGTGGGCCCAGGTCAGATCTTGGCCAGGGTGGAGTaGGCGTCGGCCTGCTCCTCTTGGATGGGGGTCCGGAAACTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASTLVGPGQILARVE*ASACSSWMGVRKLP Trigger: AGGCAGTTTCCGGACCCCCATCCAAGAGGAGCAGGCCGACGCCCACTCCACCCTGGCCAAGATCTGACCTGGGCCCACCAAGGTGGACGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGGGCAGTTGGTCCAGGGCTaGCAGGCCTGGTTGTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RQPSAPRTVQSWPRSVAGQLVQG*QAWLSP Trigger: AGGCGACAACCAGGCCTGCAAGCCCTGGACCAACTG...CCCCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGGTCGGCCTGCTCCTCTaGGATGGGGGTCCGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GGSHRHLERCRVGPGAWRVGLLL*DGGPET Trigger: AGTTTCCGGACCCCCATCCAAGAGGAGCAGGCCGAC...CCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCTGCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS GCA 90 bp | TGTGGTTTGAGGTTCGTTTCTGCGGCTGTGGGAGCCCCATGCTGCTaGGTGGGAATGTGGGTGCCAGGCTGCCGCCCCCTGTGCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CGLRFVSAAVGAPCC*VGMWVPGCRPLCWV Trigger: CACCCAGCACAGGGGGCGGCAGCCTGGCACCCACATTCCCACGCAGCAGCATGGGGCTCCCACAGCCGCAGAAACGAACCTCAAACCACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000497869.5 |
||
| CDS-3UTR CAA 90 bp | TCCCGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGCCGGAGGCAGCCACCACGTGCAGGGCTaGCACGGCTTGGAGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SRGAGGMHGIRKQRAGGSHHVQG*HGLELT Trigger: GGTCAGCTCCAAGCCGTGCAAGCCCTGCACGTGGTG...GCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS-3UTR CAA 90 bp | CGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGCCGGAGGCAGCCATGGCCCAGGTCAGATCTaGGCCAGGGTGGAGTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RGAGGMHGIRKQRAGGSHGPGQI*ARVEWA Trigger: CGCCCACTCCACCCTGGCCAAGATCTGACCTGGGCC...ATGGCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS-3UTR CAA 90 bp | CGCGGGGCAGGAGGTATGCATGGCATACGTAAGCAGAGAGCCGGAGGCAGCCATGGCTTGCAGGCCTGGTaGTCGCCTGGGGAGAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGAGGMHGIRKQRAGGSHGLQAW*SPGEKC Trigger: GCACTTCTCCCCAGGCGACAACCAGGCCTGCAAGCC...ATGGCTGCCTCCGGCTCTCTGCTTACGTATGCCATGCATACCTCCTGCCCCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS-3UTR CAA 90 bp | AGCCATCGGCACCTAGAACGGTGCAGAGTTGGCCCAGGAGCGTGGCGGGGCAGGCCCTGTCCTCACAGATaGCGTCCGAGCTATTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHRHLERCRVGPGAWRGRPCPHR*RPSYCW Trigger: CCAGCAATAGCTCGGACGCAATCTGTGAGGACAGGG...CCTGCCCCGCCACGCTCCTGGGCCAACTCTGCACCGTTCTAGGTGCCGATGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS GCA 90 bp | GGGTCCCTGTCCTCACAGATTGCGTCCGAGCTATTGCTGGCCGGCTaGAGGGTGTGCTTCCCAGCCAAGGTGCAGTTGGTCCAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSLSSQIASELLLAG*RVCFPAKVQLVQGL Trigger: CAAGCCCTGGACCAACTGCACCTTGGCTGGGAAGCACACCCTGCAGCCGGCCAGCAATAGCTCGGACGCAATCTGTGAGGACAGGGACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379236.4 ENST00000453580.1 ENST00000497869.5 |
||
| CDS-3UTR CAA 90 bp | CCCGTCTGCCAAGGTTTTTATTGTGGTCCCGCGGGGCAGGAGGTATGCATGGCACCAGCCAAGGTGCAGTaGGTCCAGGGCTTGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVCQGFYCGPAGQEVCMAPAKVQ*VQGLQA Trigger: GGCCTGCAAGCCCTGGACCAACTGCACCTTGGCTGG...TGCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAAACCTTGGCAGACGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS-3UTR CAA 90 bp | CCCGTCTGCCAAGGTTTTTATTGTGGTCCCGCGGGGCAGGAGGTATGCATGGCAATTGCGTCCGAGCTATaGCTGGCCGGCTGCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PVCQGFYCGPAGQEVCMAIASEL*LAGCRV Trigger: CACCCTGCAGCCGGCCAGCAATAGCTCGGACGCAAT...TGCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAAACCTTGGCAGACGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS-3UTR CAA 90 bp | GGCATACGTAAGCAGAGAGCCGGAGGCAGCCATCGGCACCTAGAACGGTGCAGACTGCCAAGGTTTTTATaGTGGTCCCGCGGGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GIRKQRAGGSHRHLERCRLPRFL*WSRGAG Trigger: TCCTGCCCCGCGGGACCACAATAAAAACCTTGGCAG...TCTGCACCGTTCTAGGTGCCGATGGCTGCCTCCGGCTCTCTGCTTACGTATGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS-3UTR CAA 90 bp | GTCTGCCAAGGTTTTTATTGTGGTCCCGCGGGGCAGGAGGTATGCATGGCATACCAGGGCTTGCACGGCTaGGAGCTGACCACGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VCQGFYCGPAGQEVCMAYQGLHG*ELTTSL Trigger: CAACGACGTGGTCAGCTCCAAGCCGTGCAAGCCCTG...GTATGCCATGCATACCTCCTGCCCCGCGGGACCACAATAAAAACCTTGGCAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379236.4 |
||
| CDS CCA 72 bp | GCCCTGCTCGCCCAGCAGACCCTCCGGGCTCCAGCCTaGCGGGGCCCAGCGTCCACCTTGGTGGGCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ALLAQQTLRAPA*RGPASTLVGPG Trigger: ACCTGGGCCCACCAAGGTGGACGCTGGGCCCCGCCAGGCTGGAGCCCGGAGGGTCTGCTGGGCGAGCAGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS CCA 72 bp | CAACCGCACGGCCCCCGGGGACCTCCACGGGCCGGGTaGAGGGTCCCTGTGAGGTTCTGGGCCAGGCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QPHGPRGPPRAG*RVPVRFWARLQ Trigger: CTGAAGCCTGGCCCAGAACCTCACAGGGACCCTCCACCCGGCCCGTGGAGGTCCCCGGGGGCCGTGCGGTTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS CCA 72 bp | AGGCCACATGGCCAGCGTGGTCTCCCCGACTCCACGTaGCCTGGGCCGAGTCTGGGCCCCCGGAGGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPHGQRGLPDST*PGPSLGPRRER Trigger: CCTCTCCCTCCGGGGGCCCAGACTCGGCCCAGGCCACGTGGAGTCGGGGAGACCACGCTGGCCATGTGGCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000453580.1 ENST00000497869.5 |
||
| CDS TCA 72 bp | TGGGCCTCACCCGCCAGGAGCAGTGCGGCAGGGCCATaGGGCACTCACCAGGGGGCTTGTGGGCATCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WASPARSSAAGP*GTHQGACGHRG Trigger: CCCCCGATGCCCACAAGCCCCCTGGTGAGTGCCTCATGGCCCTGCCGCACTGCTCCTGGCGGGTGAGGCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000497869.5 |
||
| CDS CAA 90 bp | GCCTGGCGGGGCCCAGCGTCCACCTTGGTGGGCCCAGGTCAGATCTaGGCCAGGGTGGAGTGGGCGTCGGCCTGCTCCTCTTGGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AWRGPASTLVGPGQI*ARVEWASACSSWMG Trigger: CCCCATCCAAGAGGAGCAGGCCGACGCCCACTCCACCCTGGCCAAGATCTGACCTGGGCCCACCAAGGTGGACGCTGGGCCCCGCCAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS GCA 72 bp | GCCCGCACGGACGGCACACCGTGTTCTGGGAGCGGCTaGAGCGGCTCACCATCCCGTTGCCTGGCCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: ARTDGTPCSGSG*SGSPSRCLACT Trigger: AGTGCAGGCCAGGCAACGGGATGGTGAGCCGCTGCAGCCGCTCCCAGAACACGGTGTGCCGTCCGTGCGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS CAA 72 bp | GGCCCAGCGTCCACCTTGGTGGGCCCAGGTCAGATCTaGGCCAGGGTGGAGTGGGCGTCGGCCTGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPASTLVGPGQI*ARVEWASACSS Trigger: AGAGGAGCAGGCCGACGCCCACTCCACCCTGGCCAAGATCTGACCTGGGCCCACCAAGGTGGACGCTGGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS GCA 72 bp | CCGCCCGGCAGCGGCAGACTGTGTCCTGTGTGGCCGTaGACAGCTGCTTCCGCTCACTCCCACTTCCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPGSGRLCPVWP*TAASAHSHFLS Trigger: GCTCAGGAAGTGGGAGTGAGCGGAAGCAGCTGTGCACGGCCACACAGGACACAGTCTGCCGCTGCCGGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497869.5 |
||
| CDS CCA 72 bp | TGCCTGGCCTGCACTCGTGGCAGCACCGGTCGTTGCTaGGGTAGGTGTCCCCGACACAGTGGAGCCCCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CLACTRGSTGRC*GRCPRHSGAPS Trigger: TGACGGGGCTCCACTGTGTCGGGGACACCTACCCCAGCAACGACCGGTGCTGCCACGAGTGCAGGCCAGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS CCA 72 bp | CCACCTTGGTGGGCCCAGGTCAGATCTTGGCCAGGGTaGAGTGGGCGTCGGCCTGCTCCTCTTGGATGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PPWWAQVRSWPG*SGRRPAPLGWG Trigger: CCCCCATCCAAGAGGAGCAGGCCGACGCCCACTCCACCCTGGCCAAGATCTGACCTGGGCCCACCAAGGTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS CCA 72 bp | GCCCAGCGTCCACCTTGGTGGGCCCAGGTCAGATCTTaGCCAGGGTGGAGTGGGCGTCGGCCTGCTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AQRPPWWAQVRS*PGWSGRRPAPL Trigger: AAGAGGAGCAGGCCGACGCCCACTCCACCCTGGCCAAGATCTGACCTGGGCCCACCAAGGTGGACGCTGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS CAA 72 bp | GCCAAGGTGCAGTTGGTCCAGGGCTTGCAGGCCTGGTaGTCGCCTGGGGAGAAGTGCCCTGGAGGGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AKVQLVQGLQAW*SPGEKCPGGQG Trigger: CCCCTGCCCTCCAGGGCACTTCTCCCCAGGCGACAACCAGGCCTGCAAGCCCTGGACCAACTGCACCTTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379236.4 ENST00000453580.1 ENST00000497869.5 |
||
| CDS GCA 72 bp | AGTCAACTCCAGGCTTGTAGCTGTCCAGGGGCTGGGTaGCCGCCCGGCAGCGGCAGACTGTGTCCTGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQLQACSCPGAG*PPGSGRLCPVW Trigger: CCACACAGGACACAGTCTGCCGCTGCCGGGCGGGCACCCAGCCCCTGGACAGCTACAAGCCTGGAGTTGACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379236.4 ENST00000453580.1 ENST00000497869.5 |
||
| CDS GCA 72 bp | GGTCAGATCTTGGCCAGGGTGGAGTGGGCGTCGGCCTaGTCCTCTTGGATGGGGGTCCGGAAACTGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GQILARVEWASA*SSWMGVRKLPP Trigger: GGGAGGCAGTTTCCGGACCCCCATCCAAGAGGAGCAGGCCGACGCCCACTCCACCCTGGCCAAGATCTGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS GCA 72 bp | CCGCCCGGCAGCGGCAGACTGTGTCCTGTGTGGCCGTaGACAGCTGCTTCCGCTCACTCCCACTTCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPGSGRLCPVWP*TAASAHSHFCS Trigger: TGAGCAGAAGTGGGAGTGAGCGGAAGCAGCTGTGCACGGCCACACAGGACACAGTCTGCCGCTGCCGGGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453580.1 |
||
| CDS GCA 72 bp | CAGCGGCAGACTGTGTCCTGTGTGGCCGTGCACAGCTaGTTCCGCTCACTCCCACTTCCTGAGCAGGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QRQTVSCVAVHS*FRSLPLPEQGP Trigger: CGGCCCCTGCTCAGGAAGTGGGAGTGAGCGGAAGCAGCTGTGCACGGCCACACAGGACACAGTCTGCCGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497869.5 |
||
| CDS CCA 72 bp | CCAGCCAAGGTGCAGTTGGTCCAGGGCTTGCAGGCCTaGTTGTCGCCTGGGGAGAAGTGCCCTGGAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAKVQLVQGLQA*LSPGEKCPGGQ Trigger: CTGCCCTCCAGGGCACTTCTCCCCAGGCGACAACCAGGCCTGCAAGCCCTGGACCAACTGCACCTTGGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379236.4 ENST00000453580.1 ENST00000497869.5 |
||
| CDS CCA 72 bp | CCTCGAAGGACCCCTGTGGCGGAGCAGACCCCGCTGTaGTTTGAGGTTCGTTTCTGCGGCTGTGGGAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PRRTPVAEQTPL*FEVRFCGCGSP Trigger: GGGGCTCCCACAGCCGCAGAAACGAACCTCAAACCACAGCGGGGTCTGCTCCGCCACAGGGGTCCTTCGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497869.5 |
||
| CDS CCA 72 bp | TCAGGTGGGGGCTGTGGACAGGGTCCTCAGGAAGCGTaGGCACTGGAGGACAGGTTGGCCTCCCCACCACAC | + |
|
Preference number: 6 (lower is better) Translates to: SGGGCGQGPQEA*ALEDRLASPPH Trigger: GTGTGGTGGGGAGGCCAACCTGTCCTCCAGTGCCCACGCTTCCTGAGGACCCTGTCCACAGCCCCCACCTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000497869.5 |
||
| CDS TCA 72 bp | GGTTACACCACGTGCAGGGCTTGCACGGCTTGGAGCTaGCCACGTCGTTGTAGAAGCCCGGCCCGCACGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GYTTCRACTAWS*PRRCRSPARTD Trigger: GTCCGTGCGGGCCGGGCTTCTACAACGACGTGGTCAGCTCCAAGCCGTGCAAGCCCTGCACGTGGTGTAACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379236.4 ENST00000497869.5 |
||
| CDS GCA 72 bp | GGGGGTCCCTGTCCTCACAGATTGCGTCCGAGCTATTaGTGGCCGGCTGCAGGGTGTGCTTCCCAGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GGPCPHRLRPSY*WPAAGCASQPR Trigger: CCTTGGCTGGGAAGCACACCCTGCAGCCGGCCAGCAATAGCTCGGACGCAATCTGTGAGGACAGGGACCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000379236.4 ENST00000453580.1 ENST00000497869.5 |
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| CDS CCA 72 bp | CCCTGGGAGACGCCTCAGCTCCTCGAAGGACCCCTGTaGCGGAGCAGACCCCGCTGTGGTTTGAGGTTCGTT | + |
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Preference number: 6 (lower is better) Translates to: PWETPQLLEGPL*RSRPRCGLRFV Trigger: AACGAACCTCAAACCACAGCGGGGTCTGCTCCGCCACAGGGGTCCTTCGAGGAGCTGAGGCGTCTCCCAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497869.5 |
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| CDS GCA 72 bp | CAGCGGCAGACTGTGTCCTGTGTGGCCGTGCACAGCTaGTTCCGCTCACTCCCACTTCTGCTCAGGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: QRQTVSCVAVHS*FRSLPLLLRPA Trigger: TGCTGGCCTGAGCAGAAGTGGGAGTGAGCGGAAGCAGCTGTGCACGGCCACACAGGACACAGTCTGCCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453580.1 |
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| CDS GCA 72 bp | ATTGCGTCCGAGCTATTGCTGGCCGGCTGCAGGGTGTaGTTCCCAGCCAAGGTGCAGTTGGTCCAGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: IASELLLAGCRV*FPAKVQLVQGL Trigger: CAAGCCCTGGACCAACTGCACCTTGGCTGGGAAGCACACCCTGCAGCCGGCCAGCAATAGCTCGGACGCAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379236.4 ENST00000453580.1 ENST00000497869.5 |
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| CDS GCA 72 bp | TCCTCACAGATTGCGTCCGAGCTATTGCTGGCCGGCTaGAGGGTGTGCTTCCCAGCCAAGGTGCAGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSQIASELLLAG*RVCFPAKVQLV Trigger: GACCAACTGCACCTTGGCTGGGAAGCACACCCTGCAGCCGGCCAGCAATAGCTCGGACGCAATCTGTGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379236.4 ENST00000453580.1 ENST00000497869.5 |
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