RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFRSF21 (Homo sapiens)

Ensembl gene IDs: ENSG00000146072

Ensembl transcript IDs: ENST00000296861.2

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTaGCACTTGATTTTGACTTTCCAAAGTGCAGCAATGTGTTCCAGA +
Preference number: 1 (lower is better)
Translates to: LLKQSWANSLWKGRH*HLILTFQSAAMCSR
Trigger: TCTGGAACACATTGCTGCACTTTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR TCA 90 bp CCAAAGTGCAGCAATGTGTTCCAGAACAGCTCAAATCCTAAAAGGTaGAGTTCAAGTTCTTTGGTGGCCCAGTTGTCAAGCCACTTAAAT +
Preference number: 1 (lower is better)
Translates to: PKCSNVFQNSSNPKR*SSSSLVAQLSSHLN
Trigger: ATTTAAGTGGCTTGACAACTGGGCCACCAAAGAACTTGAACTTCACCTTTTAGGATTTGAGCTGTTCTGGAACACATTGCTGCACTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR CCA 90 bp ATTCTACACGGTGTCCAGGTGAAAACCATACAATCAGCAATAGTGTaGTCAAGTTTCAGCCATGAATATGAACTATACAAGACATATTTA +
Preference number: 1 (lower is better)
Translates to: ILHGVQVKTIQSAIV*SSFSHEYELYKTYL
Trigger: TAAATATGTCTTGTATAGTTCATATTCATGGCTGAAACTTGACCACACTATTGCTGATTGTATGGTTTTCACCTGGACACCGTGTAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR GCA 90 bp AAGAAGTTAAGAGCCTCACAATCCAGTGTGTGGGAAAAGTCACACTaGATTTATGGTAAGTTAAGTAAATTTAAAGTGCACAGAATAATC +
Preference number: 1 (lower is better)
Translates to: KKLRASQSSVWEKSH*IYGKLSKFKVHRII
Trigger: GATTATTCTGTGCACTTTAAATTTACTTAACTTACCATAAATGCAGTGTGACTTTTCCCACACACTGGATTGTGAGGCTCTTAACTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR CAA 90 bp AGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTaGACTTTCCAAAGTGCAGCAATGTGTTCCAGAACAGCTCAAATC +
Preference number: 2 (lower is better)
Translates to: SWANSLWKGRHWHLI*TFQSAAMCSRTAQI
Trigger: GATTTGAGCTGTTCTGGAACACATTGCTGCACTTTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR-3UTR CCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAAGTTCAAGTTCTTTGGTaGCCCAGTTGTCAAGCCACT +
Preference number: 2 (lower is better)
Translates to: WANSLWKGRHWHLILTFQVQVLW*PSCQAT
Trigger: AGTGGCTTGACAACTGGGCCACCAAAGAACTTGAAC...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR-3UTR TCA 90 bp TTTGACTTTCCAAAGTGCAGCAATGTGTTCCAGAACAGCTCAAATCCTAAAAGGACCCTGCCACTAAATTaGGTAATTTCCAGAATGCAG +
Preference number: 2 (lower is better)
Translates to: FDFPKCSNVFQNSSNPKRTLPLN*VISRMQ
Trigger: CTGCATTCTGGAAATTACTCAATTTAGTGGCAGGGT...CCTTTTAGGATTTGAGCTGTTCTGGAACACATTGCTGCACTTTGGAAAGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR-3UTR GCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAATGGGAAAAGTCACACTaGATTTATGGTAAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: WANSLWKGRHWHLILTFQWEKSH*IYGKLS
Trigger: ACTTAACTTACCATAAATGCAGTGTGACTTTTCCCA...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR TCA 72 bp GTGGCCCAGTTGTCAAGCCACTTAAATAGCAAATCCTaGTGGCTTGAGGATTTCATTTCTCCAGCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: VAQLSSHLNSKS*WLEDFISPAQS
Trigger: GCTCTGGGCTGGAGAAATGAAATCCTCAAGCCATCAGGATTTGCTATTTAAGTGGCTTGACAACTGGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR-3UTR CAA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAATCTTTGGTGGCCCAGTaGTCAAGCCACTTAAATAGC +
Preference number: 3 (lower is better)
Translates to: WANSLWKGRHWHLILTFQSLVAQ*SSHLNS
Trigger: GCTATTTAAGTGGCTTGACAACTGGGCCACCAAAGA...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR-3UTR CAA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAAGCAAATCCTGATGGCTaGAGGATTTCATTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: WANSLWKGRHWHLILTFQANPDG*RISFLQ
Trigger: CTGGAGAAATGAAATCCTCAAGCCATCAGGATTTGC...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR-3UTR CAA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTCACCCTGCCACTAAATaGAGTAATTTCCAGAATGCA +
Preference number: 3 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVHPATK*SNFQNA
Trigger: TGCATTCTGGAAATTACTCAATTTAGTGGCAGGGTG...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR GCA 72 bp AGAGCCTCACAATCCAGTGTGTGGGAAAAGTCACACTaGATTTATGGTAAGTTAAGTAAATTTAAAGTGCAC +
Preference number: 3 (lower is better)
Translates to: RASQSSVWEKSH*IYGKLSKFKVH
Trigger: GTGCACTTTAAATTTACTTAACTTACCATAAATGCAGTGTGACTTTTCCCACACACTGGATTGTGAGGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR CCA 72 bp ACTTTTAAGAAGTTAAGAGCCTCACAATCCAGTGTGTaGGAAAAGTCACACTGCATTTATGGTAAGTTAAGT +
Preference number: 3 (lower is better)
Translates to: TFKKLRASQSSV*EKSHCIYGKLS
Trigger: ACTTAACTTACCATAAATGCAGTGTGACTTTTCCCACACACTGGATTGTGAGGCTCTTAACTTCTTAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGCCCCATGTGCACTGCTaGGGCCGGGCAGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLPHVHC*GRAEEG
Trigger: TCCCTCCTCTGCCCGGCCGCAGCAGTGCACATGGGG...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTAGAGGTCCCCATGGCTaGACCGGGGACTCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFRGPHG*TGDSQG
Trigger: CCCCTGCGAGTCCCCGGTTCAGCCATGGGGACCTCT...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGACACCCCATGTGCACTaGTGCGGCCGGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLTPHVH*CGRAEE
Trigger: CTCCTCTGCCCGGCCGCAGCAGTGCACATGGGGTGT...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTATCGGCGGCTGCTTCTaGCCAGCGCCGCATCCACCG +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFIGGCF*PAPHPP
Trigger: CGGTGGATGCGGCGCTGGGCAGAAGCAGCCGCCGAT...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCGAGGGCGGTGCTGCTaGTCGGAGAGGTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFRGRCC*SERSPW
Trigger: CCATGGGGACCTCTCCGAGCAGCAGCACCGCCCTCG...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGCCAGTGCTGCAGAGCTaGGTAGGCCCGCTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLPVLQS*VGPLVV
Trigger: GACCACGAGCGGGCCTACGCAGCTCTGCAGCACTGG...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAGCCCGCGTCTCCGGGTaGTCTCCTCCGACAGCGGCT +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTARVSG*SPPTAA
Trigger: AGCCGCTGTCGGAGGAGAGCACCCGGAGACGCGGGC...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACATTAGCTGGGCGAGGCTaGCCTCGGGGCCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTLAGRG*PRGPGW
Trigger: CCATCCGGGGCCCCGAGGCCAGCCTCGCCCAGCTAA...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCCTCTTGGGGCCCTTaGTGGGCGTGCTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFPSWGP*WACWTS
Trigger: AGAAGTCCAGCACGCCCATCAAGGGCCCCAAGAGGG...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACCACCCTCCTCCGCTaGCCAGACTGGTCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHTTLLR*PDWSAR
Trigger: CCTCGCCGACCAGTCTGGGCAGCGGAGGAGGGTGGT...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp TTTGACTTTCCAAAGTGCAGCAATGTGTTCCAGAACAGCTCAAATCCTAAAAGGAGAAGCCGCCGCGACTaGAGCCCGCGTCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: FDFPKCSNVFQNSSNPKRRSRRD*SPRLRV
Trigger: CACCCGGAGACGCGGGCTGCAGTCGCGGCGGCTTCT...CCTTTTAGGATTTGAGCTGTTCTGGAACACATTGCTGCACTTTGGAAAGTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAAGGAGGCGAGGGCGGTaGTGCTGCTCGGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTRRRGR*CCSERS
Trigger: GGACCTCTCCGAGCAGCAGCACCGCCCTCGCCTCCT...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TTTGACTTTCCAAAGTGCAGCAATGTGTTCCAGAACAGCTCAAATCCTAAAAGGGGCGCGCGGGGCAGCTaGAATCGGCGGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FDFPKCSNVFQNSSNPKRGARGS*NRRLLL
Trigger: CAGAAGCAGCCGCCGATTCCAGCTGCCCCGCGCGCC...CCTTTTAGGATTTGAGCTGTTCTGGAACACATTGCTGCACTTTGGAAAGTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCCCAGTGGCCTCCATaGACGGCAGCAGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFPQWPP*TAAASG
Trigger: TCCTGAAGCTGCTGCCGTCCATGGAGGCCACTGGGG...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTACTTCTCGCCCCCAGTaGCCTCCATGGACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFTSRPQ*PPWTAA
Trigger: TGCTGCCGTCCATGGAGGCCACTGGGGGCGAGAAGT...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACTCCTCCGACAGCGGCTaGGGAGAACCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHSSDSG*GEPGRR
Trigger: CCTCCTCCCTGGTTCTCCTCAGCCGCTGTCGGAGGA...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGGCCTTCTGTTCTGGCTaGGCTGTGGTGGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLAFCSG*AVVVLR
Trigger: CCTTAGCACCACCACAGCTCAGCCAGAACAGAAGGC...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAGCTGGAATCGGCGGCTaGTTCTGCCCAGCGCCGCAT +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTAGIGG*FCPAPH
Trigger: ATGCGGCGCTGGGCAGAAGCAGCCGCCGATTCCAGC...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAAGGGTCCAGGCGTACCTaGCGCAACACTGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: WANSLWKGRHWHLILTFQGSRRT*RNTVSF
Trigger: GAAGGACACAGTGTTGCGGCAGGTACGCCTGGACCC...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGCGAGGCCTTCTGTTCTaGCTGAGCTGTGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLRGLLF*LSCGGA
Trigger: AGCACCACCACAGCTCAGCCAGAACAGAAGGCCTCG...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCAGGGCGTGGAAAGATaGCTGTGCCAGGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFQGVER*LCQGKV
Trigger: CACCTTCCCCTGGCACAGCCATCTTTCCACGCCCTG...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTCCTCGGGGCCCCGGATaGTCCAGTGCTGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVPRGPG*SSAAEL
Trigger: CAGCTCTGCAGCACTGGACCATCCGGGGCCCCGAGG...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACAGGGCGCTAATTAGCTaGGCGAGGCTGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHRALIS*ARLASG
Trigger: CCCCGAGGCCAGCCTCGCCCAGCTAATTAGCGCCCT...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGTTCCTTCCCCCTTGCTaGGCTTGTGTTGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLFLPPC*ACVVRD
Trigger: GTCCCTGACAACACAAGCTCAGCAAGGGGGAAGGAA...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTCTCCAACACCCCATGTaGACTGCTGCGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVLQHPM*TAAAGQ
Trigger: CTGCCCGGCCGCAGCAGTGCACATGGGGTGTTGGAG...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACATCCCCACAGGGCAACTaGTGCAGACGCGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTSPQGN*CRRAGL
Trigger: CAAGCCTGCGCGTCTGCAGCAGTTGCCCTGTGGGGA...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAAGTGGAAAGATGGCTGTaGCAGGGGAAGGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WANSLWKGRHWHLILTFQVERWL*QGKVRW
Trigger: CCACCTCACCTTCCCCTGGCACAGCCATCTTTCCAC...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTTTCAGGATGTGTCTGTaGTGGGGGCCTTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFFRMCL*WGPCWW
Trigger: CCACCAGCAAGGCCCCCACCACAGACACATCCTGAA...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAACTGCCTTTTCCACAATaGCACTGGGATCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: WANSLWKGRHWHLILTFQLPFPQ*HWDPAG
Trigger: CCCGGCAGGATCCCAGTGCCATTGTGGAAAAGGCAG...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGCGGCTGTGTACCCATTaGAGAAAGCAGCAACCTCCC +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLRLCTH*RKQQPP
Trigger: GGGAGGTTGCTGCTTTCTCCAATGGGTACACAGCCG...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGGGCGGTATGTGCCAATaGGATTCGAGGCCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLGGMCQ*DSRPSV
Trigger: AACAGAAGGCCTCGAATCTCATTGGCACATACCGCC...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACACCTTGGTCCCCGGCTTaGTCACCACCAGGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTPWSPA*SPPGSD
Trigger: GTCAGAACCTGGTGGTGATCAAGCCGGGGACCAAGG...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACGAAGCTTCCAGCCACTaGCAACCACCCTCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHEASSH*QPPSSA
Trigger: AGCGGAGGAGGGTGGTTGGCAGTGGCTGGAAGCTTC...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACCCACAGGGCAACTGCTaGAGACGCGCAGGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHPQGNC*RRAGLC
Trigger: ACACAAGCCTGCGCGTCTGCAGCAGTTGCCCTGTGG...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTGTACCCCGAGCACACTaGTTACACCGCACATCCTCA +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFVPRAH*LHRTSS
Trigger: TGAGGATGTGCGGTGTAAGCAGTGTGCTCGGGGTAC...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTACATCGTTTCTCCGGTaGTGGCGCAGGGCGCTAATT +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFTSFLR*WRRALI
Trigger: AATTAGCGCCCTGCGCCAGCACCGGAGAAACGATGT...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGCATTGGCCATGGGCATaGCTGACTACAGTCATGGCA +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLHWPWA*LTTVMA
Trigger: TGCCATGACTGTAGTCAGCCATGCCCATGGCCAATG...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAACTTGTTCTTGTCCTGTaGGGAAGGCTCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: WANSLWKGRHWHLILTFQLVLVL*GRLHRQ
Trigger: CTGACGGTGGAGCCTTCCCCACAGGACAAGAACAAG...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGTGGGCAAATTCTCTATaGAAAGGGCGCCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLWANSL*KGRHWH
Trigger: GTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAATGGTGGTTGACTACCTaGAGGTTTGGGAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: WANSLWKGRHWHLILTFQWWLTT*RFGRVL
Trigger: CAAGACCCTCCCAAACCTTCAGGTAGTCAACCACCA...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGCTGTCCCTTCCTGGATaGTACTCAGTACCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLLSLPG*YSVPLV
Trigger: GACCAAAGGTACTGAGTAGCATCCAGGAAGGGACAG...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGGCTTCCCACTTGGGCTaGTACAAGCTTCAGGATATC +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLASHLG*YKLQDI
Trigger: GATATCCTGAAGCTTGTAGCAGCCCAAGTGGGAAGC...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTACCAGGGAGGAGGACTaGGCGCGAGAGAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVTREED*ARESKG
Trigger: TCCTTTGCTCTCTCGCGCCCAGTCCTCCTCCCTGGT...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTTTAGCACCTGGCCGGTaGCACGGTCAACATGGCGGT +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVLAPGR*HGQHGG
Trigger: ACCGCCATGTTGACCGTGCCACCGGCCAGGTGCTAA...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACTCACAGGTTAGCACCTaGCCGGTGGCACGGTCAACA +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHSQVST*PVARST
Trigger: TGTTGACCGTGCCACCGGCCAGGTGCTAACCTGTGA...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCAGGTAGCGTTAGACTaGAACATGCCAGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFQVALD*NMPGGQ
Trigger: TTGCCCACCTGGCATGTTCCAGTCTAACGCTACCTG...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACACATGTGCTCAGGGCGTaGAAAGATGGCTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTHVLRA*KDGCAR
Trigger: CCTGGCACAGCCATCTTTCCACGCCCTGAGCACATG...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGGACTACCTGAAGGTTTaGGAGGGTCTTGTTCACGTC +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLDYLKV*EGLVHV
Trigger: GACGTGAACAAGACCCTCCCAAACCTTCAGGTAGTC...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAAGGATGTGTCTGTGGTaGGGGCCTTGCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTRMCLW*GPCWWL
Trigger: CAACCACCAGCAAGGCCCCCACCACAGACACATCCT...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGTTGTCAGTTTCCAGCTaGGTGGTGTCTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLLSVSS*VVSSIS
Trigger: GCTGATGGAAGACACCACCCAGCTGGAAACTGACAA...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTTCTCAAGTTTCGCGTTaGGGCTGGGGATGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVSQVSR*GWGWGS
Trigger: CGAGCCCCATCCCCAGCCCCAACGCGAAACTTGAGA...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATCACCACCAGGTTCTaGCTCAGACAGTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLITTRF*LRQSVY
Trigger: ATACACAGACTGTCTGAGTCAGAACCTGGTGGTGAT...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGAGAGACATAGGTTCCTaGTGGACACTTGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLRDIGS*WTLVTG
Trigger: ACCTGTGACAAGTGTCCAGCAGGAACCTATGTCTCT...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAACTCAATCATTGGCCATaGGCATGGCTGACTACAGTC +
Preference number: 4 (lower is better)
Translates to: WANSLWKGRHWHLILTFQLNHWP*AWLTTV
Trigger: GACTGTAGTCAGCCATGCCCATGGCCAATGATTGAG...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACACTGGAACATGCCAGGTaGGCAAGTGCATTCTCGGTC +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTLEHAR*ASAFSV
Trigger: GACCGAGAATGCACTTGCCCACCTGGCATGTTCCAG...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAATCTGGGTTGGAGTCATaGATTTCTTCAGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: WANSLWKGRHWHLILTFQSGLES*ISSALP
Trigger: AGGCAGGGCTGAAGAAATCCATGACTCCAACCCAGA...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGCATTTCTCCCGGTTCTaGGTTGGAGTCATGGATTTC +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLHFSRF*VGVMDF
Trigger: GAAATCCATGACTCCAACCCAGAACCGGGAGAAATG...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACACACTGGCTTCCCACTTaGGCTGCTACAAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTHWLPT*AATSFR
Trigger: CCTGAAGCTTGTAGCAGCCCAAGTGGGAAGCCAGTG...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTTCGTTTCTCCGGTGCTaGCGCAGGGCGCTAATTAGC +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVSFLRC*RRALIS
Trigger: GCTAATTAGCGCCCTGCGCCAGCACCGGAGAAACGA...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACACAGTTTCCAGCTGGGTaGTGTCTTCCATCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTQFPAG*CLPSAH
Trigger: GTGGGCTGATGGAAGACACCACCCAGCTGGAAACTG...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGGTCTGGCTGGCTTCCTaGCTCTTGACTCCAATAATT +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLVWLAS*LLTPII
Trigger: AATTATTGGAGTCAAGAGCCAGGAAGCCAGCCAGAC...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTGGCCATGGGCATGGCTaGCTACAGTCATGGCATTTC +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVGHGHG*LQSWHF
Trigger: GAAATGCCATGACTGTAGTCAGCCATGCCCATGGCC...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACTAGAAGGCACATCTaGGAAGGTACCCCGAGCACA +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHTRRHI*EGTPST
Trigger: TGTGCTCGGGGTACCTTCTCAGATGTGCCTTCTAGT...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp TTTGACTTTCCAAAGTGCAGCAATGTGTTCCAGAACAGCTCAAATCCTAAAAGGGGCCTTGCTGGTGGTTaGCTACCTGAAGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: FDFPKCSNVFQNSSNPKRGLAGG*LPEGLG
Trigger: TCCCAAACCTTCAGGTAGTCAACCACCAGCAAGGCC...CCTTTTAGGATTTGAGCTGTTCTGGAACACATTGCTGCACTTTGGAAAGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACACCAGGACCAAGGCCTTaGGAGCAGATTGGACCTATT +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTPGPRP*EQIGPI
Trigger: AATAGGTCCAATCTGCTCTCAAGGCCTTGGTCCTGG...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp TTTGACTTTCCAAAGTGCAGCAATGTGTTCCAGAACAGCTCAAATCCTAAAAGGTGCCAGGTGGGCAAGTaGATTCTCGGTCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: FDFPKCSNVFQNSSNPKRCQVGK*ILGQSR
Trigger: CCTTGACTGACCGAGAATGCACTTGCCCACCTGGCA...CCTTTTAGGATTTGAGCTGTTCTGGAACACATTGCTGCACTTTGGAAAGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAAGGATTTCTTCAGCCCTaGCTTTTCCACAATGGCACT +
Preference number: 4 (lower is better)
Translates to: WANSLWKGRHWHLILTFQGFLQP*LFHNGT
Trigger: AGTGCCATTGTGGAAAAGGCAGGGCTGAAGAAATCC...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACGTGGCACGGTCAACATaGCGGTATGTGCCAATGAGA +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHVARST*RYVPMR
Trigger: TCTCATTGGCACATACCGCCATGTTGACCGTGCCAC...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TTTGACTTTCCAAAGTGCAGCAATGTGTTCCAGAACAGCTCAAATCCTAAAAGGACAGGACACACCGTATaGGGGGCACAGGTAGCGTTA +
Preference number: 4 (lower is better)
Translates to: FDFPKCSNVFQNSSNPKRTGHTV*GAQVAL
Trigger: TAACGCTACCTGTGCCCCCCATACGGTGTGTCCTGT...CCTTTTAGGATTTGAGCTGTTCTGGAACACATTGCTGCACTTTGGAAAGTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAATGGAAAGGGCGCCACTaGCACTTGATTTTGACTTTC +
Preference number: 4 (lower is better)
Translates to: WANSLWKGRHWHLILTFQWKGRH*HLILTF
Trigger: GAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCA...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCAAATCCTGATGGCTTaGGGATTTCATTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFQILMA*GFHFSS
Trigger: GCTGGAGAAATGAAATCCTCAAGCCATCAGGATTTG...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACTCATCAAAGATAGGCTaGAAGTCACAGGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHSSKIG*KSQGSR
Trigger: CCTGGACCCCTGTGACTTGCAGCCTATCTTTGATGA...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACGGGACTGTCCCTTCCTaGATGCTACTCAGTACCTTT +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHGTVPS*MLLSTF
Trigger: AAAGGTACTGAGTAGCATCCAGGAAGGGACAGTCCC...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACCTCCCGGTTCTGGGTTaGAGTCATGGATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHLPVLG*SHGFLQ
Trigger: CTGAAGAAATCCATGACTCCAACCCAGAACCGGGAG...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCAACCTCCCTCTCACTaGCATTGCAAAGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFQPPSH*HCKETD
Trigger: ATCAGTTTCTTTGCAATGCCAGTGAGAGGGAGGTTG...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACTCTATGCCATTCTCATaGCTGGTAAAGGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHSMPFS*LVKVPT
Trigger: TGTGGGGACCTTTACCAGGCATGAGAATGGCATAGA...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAACGATACCATGGCCATTaGAGTAGTAGATCCATTTCT +
Preference number: 4 (lower is better)
Translates to: WANSLWKGRHWHLILTFQRYHGH*SSRSIS
Trigger: AGAAATGGATCTACTACTGCAATGGCCATGGTATCG...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACCTTTGGGAACATAAGTaGAGGAAGGGACTTCATGGG +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHLWEHK*RKGLHG
Trigger: CCCATGAAGTCCCTTCCTCCACTTATGTTCCCAAAG...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTTTGAGTTCATGCCTTTaGGAACATAAGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFLSSCL*EHKWRK
Trigger: CTTCCTCCACTTATGTTCCCAAAGGCATGAACTCAA...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTTCACAATCCAGTGTGTaGGAAAAGTCACACTGCATT +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFSQSSV*EKSHCI
Trigger: AATGCAGTGTGACTTTTCCCACACACTGGATTGTGA...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACGTTCAAGTTCTTTGGTaGCCCAGTTGTCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHVQVLW*PSCQAT
Trigger: AGTGGCTTGACAACTGGGCCACCAAAGAACTTGAAC...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACGAAGTTCAAGTTCTTTaGTGGCCCAGTTGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHEVQVL*WPSCQA
Trigger: GGCTTGACAACTGGGCCACCAAAGAACTTGAACTTC...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
3UTR CAA 72 bp AATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTaGACTTTCCAAAGTGCAGCAATGTGTTCCAGAACA +
Preference number: 4 (lower is better)
Translates to: NSLWKGRHWHLI*TFQSAAMCSRT
Trigger: TGTTCTGGAACACATTGCTGCACTTTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTAGGGCAAATGCTCATTaGTGTCAAAATGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: KLGKFSMERAPLALDFDFRANAH*CQNACV
Trigger: TACACAAGCATTTTGACATCAATGAGCATTTGCCCT...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR TCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACATACACGGTGTCCAGGTaGAAACCATACAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTYTVSR*KPYNQQ
Trigger: TTGCTGATTGTATGGTTTTCACCTGGACACCGTGTA...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGAAAGAACTCAAGCACTaGCCATATTCTCTGTTAAAC +
Preference number: 4 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLKELKH*PYSLLN
Trigger: GTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTT...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTAGCTTTTCCGGATACTaGACACCACAATCACCACAA +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVSFSGY*TPQSPQ
Trigger: TTGTGGTGATTGTGGTGTGCAGTATCCGGAAAAGCT...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTCAGAGGCAGAAGAGTTaGATTCTGTTGAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVQRQKS*ILLSSC
Trigger: GCATGAACTCAACAGAATCCAACTCTTCTGCCTCTG...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTGCTACTCAGTACCTTTaGTCTAACAGAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVATQYL*SNRGRR
Trigger: TCTTCTGCCTCTGTTAGACCAAAGGTACTGAGTAGC...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAATTCTGTTGAGTTCATaGCTTTGGGAACATAAGTGG +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTILLSS*LWEHKW
Trigger: CCACTTATGTTCCCAAAGGCATGAACTCAACAGAAT...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAATCATTGATGTCAAAATaGTTGTGTAGGTTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: WANSLWKGRHWHLILTFQSLMSK*LCRFCL
Trigger: TAGACAGAACCTACACAAGCATTTTGACATCAATGA...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAATCATCCAGGGCAAATaGTCATTGATGTCAAAATGC +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTIIQGK*SLMSKC
Trigger: GCATTTTGACATCAATGAGCATTTGCCCTGGATGAT...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACTTTGACTTTCCAAAGTaGAGCAATGTGTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: REGERTQALAIFSVKHTHFDFPK*SNVFQN
Trigger: GTTCTGGAACACATTGCTGCACTTTGGAAAGTCAAA...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACACACAACAGTTACACCTaGCAAAGGCTTATAAACCAA +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTHNSYT*QRLINQ
Trigger: TTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTG...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTCCCTCTCACTGGCATTaGAAAGAAACTGATAGATAT +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVPSHWH*KETDRY
Trigger: ATATCTATCAGTTTCTTTGCAATGCCAGTGAGAGGG...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR GCA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACATGGGAAAAGTCACACTaGATTTATGGTAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTWEKSH*IYGKLS
Trigger: ACTTAACTTACCATAAATGCAGTGTGACTTTTCCCA...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CCA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTTCAGGATTTAGAAAGTaGAGCATGTCATCAAAGATA +
Preference number: 4 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVSGFRK*SMSSKI
Trigger: TATCTTTGATGACATGCTCCACTTTCTAAATCCTGA...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp CGCCGCCTCCCGGGCCGGGAGCCCATCTACCTCCAACACCCCATGTaGACTGCTGCGGCCGGGCAGAGGAGGGAGGCGGCAAGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RRLPGREPIYLQHPM*TAAAGQRREAAREA
Trigger: AGCCTCCCTTGCCGCCTCCCTCCTCTGCCCGGCCGCAGCAGTGCACATGGGGTGTTGGAGGTAGATGGGCTCCCGGCCCGGGAGGCGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp CTGTGGCTCGGCGGGCGATGCGGCTGCAGGAGGCGAGGGCGGTGCTaGTGCTCGGAGAGGTCCCCATGGCTGAACCGGGGACTCGCAGGG +
Preference number: 5 (lower is better)
Translates to: LWLGGRCGCRRRGRC*CSERSPWLNRGLAG
Trigger: CCCTGCGAGTCCCCGGTTCAGCCATGGGGACCTCTCCGAGCAGCAGCACCGCCCTCGCCTCCTGCAGCCGCATCGCCCGCCGAGCCACAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp CCCAGGCGGGGAGAAGCCGCCGCGACTGCAGCCCGCGTCTCCGGGTaGTCTCCTCCGACAGCGGCTGAGGAGAACCAGGGAGGAGGACTG +
Preference number: 5 (lower is better)
Translates to: PRRGEAAATAARVSG*SPPTAAEENQGGGL
Trigger: CAGTCCTCCTCCCTGGTTCTCCTCAGCCGCTGTCGGAGGAGAGCACCCGGAGACGCGGGCTGCAGTCGCGGCGGCTTCTCCCCGCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp TGGCTGTGGCTCGGCGGGCGATGCGGCTGCAGGAGGCGAGGGCGGTaGTGCTGCTCGGAGAGGTCCCCATGGCTGAACCGGGGACTCGCA +
Preference number: 5 (lower is better)
Translates to: WLWLGGRCGCRRRGR*CCSERSPWLNRGLA
Trigger: TGCGAGTCCCCGGTTCAGCCATGGGGACCTCTCCGAGCAGCAGCACCGCCCTCGCCTCCTGCAGCCGCATCGCCCGCCGAGCCACAGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp GGAGAAGGGAGCCCGCGATCATCGTGGCTGTGGCTCGGCGGGCGATaGGGCTGCAGGAGGCGAGGGCGGTGCTGCTGCTCGGAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GEGSPRSSWLWLGGR*GCRRRGRCCCSERS
Trigger: GGACCTCTCCGAGCAGCAGCACCGCCCTCGCCTCCTGCAGCCGCATCGCCCGCCGAGCCACAGCCACGATGATCGCGGGCTCCCTTCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp CCTCCCGGGCCGGGAGCCCATCTACCTCCAACACCCCATGTGCACTaGTGCGGCCGGGCAGAGGAGGGAGGCGGCAAGGGAGGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: PPGPGAHLPPTPHVH*CGRAEEGGGKGGSR
Trigger: CCTAGAGCCTCCCTTGCCGCCTCCCTCCTCTGCCCGGCCGCAGCAGTGCACATGGGGTGTTGGAGGTAGATGGGCTCCCGGCCCGGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp GGCGAGGCTGGCCTCGGGGCCCCGGATGGTCCAGTGCTGCAGAGCTaGGTAGGCCCGCTCGTGGTCGGCTGTGTACCCATTGGAGAAAGC +
Preference number: 5 (lower is better)
Translates to: GEAGLGAPDGPVLQS*VGPLVVGCVPIGES
Trigger: GCTTTCTCCAATGGGTACACAGCCGACCACGAGCGGGCCTACGCAGCTCTGCAGCACTGGACCATCCGGGGCCCCGAGGCCAGCCTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 90 bp TCCACAACATCGTTTCTCCGGTGCTGGCGCAGGGCGCTAATTAGCTaGGCGAGGCTGGCCTCGGGGCCCCGGATGGTCCAGTGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: STTSFLRCWRRALIS*ARLASGPRMVQCCR
Trigger: TCTGCAGCACTGGACCATCCGGGGCCCCGAGGCCAGCCTCGCCCAGCTAATTAGCGCCCTGCGCCAGCACCGGAGAAACGATGTTGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 90 bp TCCATCAGCCCACGAATCTTCTCCACAACATCGTTTCTCCGGTGCTaGCGCAGGGCGCTAATTAGCTGGGCGAGGCTGGCCTCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: SISPRIFSTTSFLRC*RRALISWARLASGP
Trigger: GGGCCCCGAGGCCAGCCTCGCCCAGCTAATTAGCGCCCTGCGCCAGCACCGGAGAAACGATGTTGTGGAGAAGATTCGTGGGCTGATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp CGAGAGAGCAAAGGAACGACTTCCCATAGCGAAGCTTCCAGCCACTaGCAACCACCCTCCTCCGCTGCCCAGACTGGTCGGCGAGGGACT +
Preference number: 5 (lower is better)
Translates to: RESKGTTSHSEASSH*QPPSSAAQTGRRGT
Trigger: AGTCCCTCGCCGACCAGTCTGGGCAGCGGAGGAGGGTGGTTGGCAGTGGCTGGAAGCTTCGCTATGGGAAGTCGTTCCTTTGCTCTCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 90 bp GGTGCTCTCCTCCGACAGCGGCTGAGGAGAACCAGGGAGGAGGACTaGGCGCGAGAGAGCAAAGGAACGACTTCCCATAGCGAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GALLRQRLRRTREED*ARESKGTTSHSEAS
Trigger: GGAAGCTTCGCTATGGGAAGTCGTTCCTTTGCTCTCTCGCGCCCAGTCCTCCTCCCTGGTTCTCCTCAGCCGCTGTCGGAGGAGAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp TCTTCCATCAGCCCACGAATCTTCTCCACAACATCGTTTCTCCGGTaGTGGCGCAGGGCGCTAATTAGCTGGGCGAGGCTGGCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SSISPRIFSTTSFLR*WRRALISWARLASG
Trigger: CCCCGAGGCCAGCCTCGCCCAGCTAATTAGCGCCCTGCGCCAGCACCGGAGAAACGATGTTGTGGAGAAGATTCGTGGGCTGATGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp GGACTTCATGGGTTTCCATGTGCTCAGGGCGTGGAAAGATGGCTGTaGCAGGGGAAGGTGAGGTGGAGCTGGAGAAGGACGGGAGTGTGC +
Preference number: 5 (lower is better)
Translates to: GLHGFPCAQGVERWL*QGKVRWSWRRTGVC
Trigger: GCACACTCCCGTCCTTCTCCAGCTCCACCTCACCTTCCCCTGGCACAGCCATCTTTCCACGCCCTGAGCACATGGAAACCCATGAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 90 bp TGTGCTCAGGGCGTGGAAAGATGGCTGTGCCAGGGGAAGGTGAGGTaGAGCTGGAGAAGGACGGGAGTGTGCCACAGACGTTGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: CAQGVERWLCQGKVR*SWRRTGVCHRRCLS
Trigger: AGACAGACAACGTCTGTGGCACACTCCCGTCCTTCTCCAGCTCCACCTCACCTTCCCCTGGCACAGCCATCTTTCCACGCCCTGAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 90 bp TCTGTCCCTTTCTTCCGCACACCCCAACCCACAGGACACACCGTATaGGGGGCACAGGTAGCGTTAGACTGGAACATGCCAGGTGGGCAA +
Preference number: 5 (lower is better)
Translates to: SVPFFRTPQPTGHTV*GAQVALDWNMPGGQ
Trigger: TTGCCCACCTGGCATGTTCCAGTCTAACGCTACCTGTGCCCCCCATACGGTGTGTCCTGTGGGTTGGGGTGTGCGGAAGAAAGGGACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 90 bp AAGGGGCTCCGACTCATCCACGAAGAAGCCCTTGTTCTTGTCCTGTaGGGAAGGCTCCACCGTCAGGAGAGCGGAATTCTCAAGTTTCGC +
Preference number: 5 (lower is better)
Translates to: KGLRLIHEEALVLVL*GRLHRQESGILKFR
Trigger: GCGAAACTTGAGAATTCCGCTCTCCTGACGGTGGAGCCTTCCCCACAGGACAAGAACAAGGGCTTCTTCGTGGATGAGTCGGAGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 90 bp ACGGGAGTGTGCCACAGACGTTGTCTGTCTCCTTGGTCCCCGGCTTaGTCACCACCAGGTTCTGACTCAGACAGTCTGTGTATGCTTTGC +
Preference number: 5 (lower is better)
Translates to: TGVCHRRCLSPWSPA*SPPGSDSDSLCMLC
Trigger: GCAAAGCATACACAGACTGTCTGAGTCAGAACCTGGTGGTGATCAAGCCGGGGACCAAGGAGACAGACAACGTCTGTGGCACACTCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 90 bp CTGAAGGTTTGGGAGGGTCTTGTTCACGTCTTCCTTCCCCCTTGCTaGGCTTGTGTTGTCAGGGACTGTCCCTTCCTGGATGCTACTCAG +
Preference number: 5 (lower is better)
Translates to: LKVWEGLVHVFLPPC*ACVVRDCPFLDATQ
Trigger: CTGAGTAGCATCCAGGAAGGGACAGTCCCTGACAACACAAGCTCAGCAAGGGGGAAGGAAGACGTGAACAAGACCCTCCCAAACCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp AGCTCCTCAGGATTTAGAAAGTGGAGCATGTCATCAAAGATAGGCTaGAAGTCACAGGGGTCCAGGCGTACCTGCCGCAACACTGTGTCC +
Preference number: 5 (lower is better)
Translates to: SSSGFRKWSMSSKIG*KSQGSRRTCRNTVS
Trigger: GGACACAGTGTTGCGGCAGGTACGCCTGGACCCCTGTGACTTGCAGCCTATCTTTGATGACATGCTCCACTTTCTAAATCCTGAGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACCCCCTCTTGGGGCCCTaGATGGGCGTGCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: REGERTQALAIFSVKHTHPLLGP*MGVLDF
Trigger: GAAGTCCAGCACGCCCATCAAGGGCCCCAAGAGGGG...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 90 bp TGGGGAATCTCTTCAATCACCCGCAGCTCCTCAGGATTTAGAAAGTaGAGCATGTCATCAAAGATAGGCTGCAAGTCACAGGGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: WGISSITRSSSGFRK*SMSSKIGCKSQGSR
Trigger: CCTGGACCCCTGTGACTTGCAGCCTATCTTTGATGACATGCTCCACTTTCTAAATCCTGAGGAGCTGCGGGTGATTGAAGAGATTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAAAGTGTGCCACAGACGTaGTCTGTCTCCTTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: WANSLWKGRHWHLILTFQSVPQT*SVSLVP
Trigger: GGGGACCAAGGAGACAGACAACGTCTGTGGCACACT...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGAGGTTTGGGAGGGTCTaGTTCACGTCTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLRFGRV*FTSSFP
Trigger: GGGGAAGGAAGACGTGAACAAGACCCTCCCAAACCT...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACACTAGGATGTCCCCTCTaGGGGCCCTTGATGGGCGTG +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTLGCPL*GPLMGV
Trigger: CACGCCCATCAAGGGCCCCAAGAGGGGACATCCTAG...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTGTTCCTGCTGGACACTaGTCACAGGTTAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: KLGKFSMERAPLALDFDFVPAGH*SQVSTW
Trigger: CCAGGTGCTAACCTGTGACAAGTGTCCAGCAGGAAC...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp AAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCTTGCTGAGCTTGTGTaGTCAGGGACTGTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: KLGKFSMERAPLALDFDFLAELV*SGTVPS
Trigger: GGAAGGGACAGTCCCTGACAACACAAGCTCAGCAAG...AAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAACGTCTTCCTTCCCCCTaGCTGAGCTTGTGTTGTCAG +
Preference number: 5 (lower is better)
Translates to: WANSLWKGRHWHLILTFQRLPSP*LSLCCQ
Trigger: CTGACAACACAAGCTCAGCAAGGGGGAAGGAAGACG...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 90 bp ACAGTCTGTGTATGCTTTGCATTTCATCACACTAGAAGGCACATCTaGGAAGGTACCCCGAGCACACTGCTTACACCGCACATCCTCAGT +
Preference number: 5 (lower is better)
Translates to: TVCVCFAFHHTRRHI*EGTPSTLLTPHILS
Trigger: ACTGAGGATGTGCGGTGTAAGCAGTGTGCTCGGGGTACCTTCTCAGATGTGCCTTCTAGTGTGATGAAATGCAAAGCATACACAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 90 bp ACGTTGTCTGTCTCCTTGGTCCCCGGCTTGATCACCACCAGGTTCTaGCTCAGACAGTCTGTGTATGCTTTGCATTTCATCACACTAGAA +
Preference number: 5 (lower is better)
Translates to: TLSVSLVPGLITTRF*LRQSVYALHFITLE
Trigger: TTCTAGTGTGATGAAATGCAAAGCATACACAGACTGTCTGAGTCAGAACCTGGTGGTGATCAAGCCGGGGACCAAGGAGACAGACAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAACGTTGTCTGTCTCCTaGGTCCCCGGCTTGATCACC +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTTLSVS*VPGLIT
Trigger: GGTGATCAAGCCGGGGACCAAGGAGACAGACAACGT...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp TTTGACTTTCCAAAGTGCAGCAATGTGTTCCAGAACAGCTCAAATCCTAAAAGGTCTGTGGTGGGGGCCTaGCTGGTGGTTGACTACCTG +
Preference number: 5 (lower is better)
Translates to: FDFPKCSNVFQNSSNPKRSVVGA*LVVDYL
Trigger: CAGGTAGTCAACCACCAGCAAGGCCCCCACCACAGA...CCTTTTAGGATTTGAGCTGTTCTGGAACACATTGCTGCACTTTGGAAAGTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACACCACTGGCTTCCCACTaGGGCTGCTACAAGCTTCAG +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTPLASH*GCYKLQ
Trigger: CTGAAGCTTGTAGCAGCCCAAGTGGGAAGCCAGTGG...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAAATCGGGAGAGCTAGTTaGTCAGTTTCCAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: WANSLWKGRHWHLILTFQIGRAS*SVSSWV
Trigger: CACCCAGCTGGAAACTGACAAACTAGCTCTCCCGAT...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACATGCAGACGCGCAGGCTaGTGTTGGTACAATGCTCAG +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTCRRAG*CWYNAQ
Trigger: CTGAGCATTGTACCAACACAAGCCTGCGCGTCTGCA...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGGTAATTTCTCAATCATaGGCCATGGGCATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLVISQS*AMGMAD
Trigger: GTCAGCCATGCCCATGGCCAATGATTGAGAAATTAC...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACATCGGCTGTGTACCCATaGGAGAAAGCAGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTSAVYP*EKAATS
Trigger: GGAGGTTGCTGCTTTCTCCAATGGGTACACAGCCGA...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAAAGAAGCCCTTGTTCTaGTCCTGTGGGGAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTKKPLF*SCGEGS
Trigger: GGAGCCTTCCCCACAGGACAAGAACAAGGGCTTCTT...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 90 bp TTGACTCCAATAATTTCGAATAGCCGGTCTAGTTTGTCCTCAGCCTaGGGAATCTCTTCAATCACCCGCAGCTCCTCAGGATTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: LTPIISNSRSSLSSA*GISSITRSSSGFRK
Trigger: CTTTCTAAATCCTGAGGAGCTGCGGGTGATTGAAGAGATTCCCCAGGCTGAGGACAAACTAGACCGGCTATTCGAAATTATTGGAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAAATAGCCGGTCTAGTTaGTCCTCAGCCTGGGGAATC +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTNSRSS*SSAWGI
Trigger: GATTCCCCAGGCTGAGGACAAACTAGACCGGCTATT...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp CTTTTAAAGCAAAGCTGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGCACTGGCACTTGATTTaGACTTTCCAAAGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LLKQSWANSLWKGRHWHLHWHLI*TFQSAA
Trigger: TGCTGCACTTTGGAAAGTCAAAATCAAGTGCCAGTG...CAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCAGCTTTGCTTTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAACCAGGACCAAGGCCTaGAGAGCAGATTGGACCTAT +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTTRTKA*RADWTY
Trigger: ATAGGTCCAATCTGCTCTCAAGGCCTTGGTCCTGGT...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 90 bp ACCACAAGCACCAGCAGCAGGAAAAGCACAATCATCCAGGGCAAATaGTCATTGATGTCAAAATGCTTGTGTAGGTTCTGTCTAGGATGT +
Preference number: 5 (lower is better)
Translates to: TTSTSSRKSTIIQGK*SLMSKCLCRFCLGC
Trigger: ACATCCTAGACAGAACCTACACAAGCATTTTGACATCAATGAGCATTTGCCCTGGATGATTGTGCTTTTCCTGCTGCTGGTGCTTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTACGCGCAGGCTTGTGTaGGTACAATGCTCAGAGACA +
Preference number: 5 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVTRRLV*VQCSET
Trigger: TGTCTCTGAGCATTGTACCAACACAAGCCTGCGCGT...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACATCTCCCGGTTCTGGGTaGGAGTCATGGATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTSPGSG*ESWISS
Trigger: TGAAGAAATCCATGACTCCAACCCAGAACCGGGAGA...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTTCCACGAAGAAGCCCTaGTTCTTGTCCTGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVSTKKP*FLSCGE
Trigger: TTCCCCACAGGACAAGAACAAGGGCTTCTTCGTGGA...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp TGGGCAAATTCTCTATGGAAAGGGCGCCACTGGCACTTGATTTTGACTTTCCAACTGGCTTCCTGGCTCTaGACTCCAATAATTTCGAAT +
Preference number: 5 (lower is better)
Translates to: WANSLWKGRHWHLILTFQLASWL*TPIISN
Trigger: ATTCGAAATTATTGGAGTCAAGAGCCAGGAAGCCAG...TTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCCTTTCCATAGAGAATTTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAGGGCGCCACTGGCACTaGATTTTGACTTTCCAAAGT +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTGRHWH*ILTFQS
Trigger: ACTTTGGAAAGTCAAAATCAAGTGCCAGTGGCGCCC...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACTCTTTGGTGGCCCAGTaGTCAAGCCACTTAAATAGC +
Preference number: 5 (lower is better)
Translates to: REGERTQALAIFSVKHTHSLVAQ*SSHLNS
Trigger: GCTATTTAAGTGGCTTGACAACTGGGCCACCAAAGA...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACAGAGGCAGAAGAGTaGGATTCTGTTGAGTTCATG +
Preference number: 5 (lower is better)
Translates to: REGERTQALAIFSVKHTHTEAEE*DSVEFM
Trigger: CATGAACTCAACAGAATCCAACTCTTCTGCCTCTGT...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAGCAAATCCTGATGGCTaGAGGATTTCATTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTANPDG*RISFLQ
Trigger: CTGGAGAAATGAAATCCTCAAGCCATCAGGATTTGC...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACGGCCTTGAGAGCAGATaGGACCTATTGATTATGTGT +
Preference number: 5 (lower is better)
Translates to: REGERTQALAIFSVKHTHGLESR*DLLIMC
Trigger: ACACATAATCAATAGGTCCAATCTGCTCTCAAGGCC...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp AGAGAAGGAGAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACAAGAGTTGGATTCTGTaGAGTTCATGCCTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: REGERTQALAIFSVKHTHKSWIL*SSCLWE
Trigger: TTCCCAAAGGCATGAACTCAACAGAATCCAACTCTT...GTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTCTCCTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTCAGGGCAAATGCTCATaGATGTCAAAATGCTTGTGT +
Preference number: 5 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVQGKCS*MSKCLC
Trigger: ACACAAGCATTTTGACATCAATGAGCATTTGCCCTG...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp GAAAGAACTCAAGCACTGGCCATATTCTCTGTTAAACACACACACACACACACAGTGTCCTTCTTTTCTTaGGTAATAAAGGAACCGTTC +
Preference number: 5 (lower is better)
Translates to: ERTQALAIFSVKHTHTHTVSFFS*VIKEPF
Trigger: GAACGGTTCCTTTATTACCAAAGAAAAGAAGGACAC...TGTGTGTGTGTGTGTGTGTTTAACAGAGAATATGGCCAGTGCTTGAGTTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS-3UTR CAA 90 bp TTTCACAACAGTTACACCTGGCAAAGGCTTATAAACCAACTTCCCAGAAGAGTTCAGTCTGTGTATGCTTaGCATTTCATCACACTAGAA +
Preference number: 5 (lower is better)
Translates to: FHNSYTWQRLINQLPRRVQSVYA*HFITLE
Trigger: TTCTAGTGTGATGAAATGCAAAGCATACACAGACTG...AACTCTTCTGGGAAGTTGGTTTATAAGCCTTTGCCAGGTGTAACTGTTGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp GGCGGGCGATGCGGCTGCAGGAGGCGAGGGCGGTGCTaGTGCTCGGAGAGGTCCCCATGGCTGAACCGGGGA +
Preference number: 6 (lower is better)
Translates to: GGRCGCRRRGRC*CSERSPWLNRG
Trigger: TCCCCGGTTCAGCCATGGGGACCTCTCCGAGCAGCAGCACCGCCCTCGCCTCCTGCAGCCGCATCGCCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp CTCGGCGGGCGATGCGGCTGCAGGAGGCGAGGGCGGTaGTGCTGCTCGGAGAGGTCCCCATGGCTGAACCGG +
Preference number: 6 (lower is better)
Translates to: LGGRCGCRRRGR*CCSERSPWLNR
Trigger: CCGGTTCAGCCATGGGGACCTCTCCGAGCAGCAGCACCGCCCTCGCCTCCTGCAGCCGCATCGCCCGCCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp CCGGGCCGGGAGCCCATCTACCTCCAACACCCCATGTaGACTGCTGCGGCCGGGCAGAGGAGGGAGGCGGCA +
Preference number: 6 (lower is better)
Translates to: PGREPIYLQHPM*TAAAGQRREAA
Trigger: TGCCGCCTCCCTCCTCTGCCCGGCCGCAGCAGTGCACATGGGGTGTTGGAGGTAGATGGGCTCCCGGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp GGGCGATGCGGCTGCAGGAGGCGAGGGCGGTGCTGCTaGTCGGAGAGGTCCCCATGGCTGAACCGGGGACTC +
Preference number: 6 (lower is better)
Translates to: GRCGCRRRGRCC*SERSPWLNRGL
Trigger: GAGTCCCCGGTTCAGCCATGGGGACCTCTCCGAGCAGCAGCACCGCCCTCGCCTCCTGCAGCCGCATCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp CGATCATCGTGGCTGTGGCTCGGCGGGCGATGCGGCTaGAGGAGGCGAGGGCGGTGCTGCTGCTCGGAGAGG +
Preference number: 6 (lower is better)
Translates to: RSSWLWLGGRCG*RRRGRCCCSER
Trigger: CCTCTCCGAGCAGCAGCACCGCCCTCGCCTCCTGCAGCCGCATCGCCCGCCGAGCCACAGCCACGATGATCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp GGAGAAGCCGCCGCGACTGCAGCCCGCGTCTCCGGGTaGTCTCCTCCGACAGCGGCTGAGGAGAACCAGGGA +
Preference number: 6 (lower is better)
Translates to: GEAAATAARVSG*SPPTAAEENQG
Trigger: TCCCTGGTTCTCCTCAGCCGCTGTCGGAGGAGAGCACCCGGAGACGCGGGCTGCAGTCGCGGCGGCTTCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp CAAGCAGGAGAAGGGAGCCCGCGATCATCGTGGCTGTaGCTCGGCGGGCGATGCGGCTGCAGGAGGCGAGGG +
Preference number: 6 (lower is better)
Translates to: QAGEGSPRSSWL*LGGRCGCRRRG
Trigger: CCCTCGCCTCCTGCAGCCGCATCGCCCGCCGAGCCACAGCCACGATGATCGCGGGCTCCCTTCTCCTGCTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp CCGGGAGCCCATCTACCTCCAACACCCCATGTGCACTaGTGCGGCCGGGCAGAGGAGGGAGGCGGCAAGGGA +
Preference number: 6 (lower is better)
Translates to: PGAHLPPTPHVH*CGRAEEGGGKG
Trigger: TCCCTTGCCGCCTCCCTCCTCTGCCCGGCCGCAGCAGTGCACATGGGGTGTTGGAGGTAGATGGGCTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp GGCCTCGGGGCCCCGGATGGTCCAGTGCTGCAGAGCTaGGTAGGCCCGCTCGTGGTCGGCTGTGTACCCATT +
Preference number: 6 (lower is better)
Translates to: GLGAPDGPVLQS*VGPLVVGCVPI
Trigger: AATGGGTACACAGCCGACCACGAGCGGGCCTACGCAGCTCTGCAGCACTGGACCATCCGGGGCCCCGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp TCGTTTCTCCGGTGCTGGCGCAGGGCGCTAATTAGCTaGGCGAGGCTGGCCTCGGGGCCCCGGATGGTCCAG +
Preference number: 6 (lower is better)
Translates to: SFLRCWRRALIS*ARLASGPRMVQ
Trigger: CTGGACCATCCGGGGCCCCGAGGCCAGCCTCGCCCAGCTAATTAGCGCCCTGCGCCAGCACCGGAGAAACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp GGAATCCAAGCAGGAGAAGGGAGCCCGCGATCATCGTaGCTGTGGCTCGGCGGGCGATGCGGCTGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: GIQAGEGSPRSS*LWLGGRCGCRR
Trigger: CCTCCTGCAGCCGCATCGCCCGCCGAGCCACAGCCACGATGATCGCGGGCTCCCTTCTCCTGCTTGGATTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp AAAGGAACGACTTCCCATAGCGAAGCTTCCAGCCACTaGCAACCACCCTCCTCCGCTGCCCAGACTGGTCGG +
Preference number: 6 (lower is better)
Translates to: KGTTSHSEASSH*QPPSSAAQTGR
Trigger: CCGACCAGTCTGGGCAGCGGAGGAGGGTGGTTGGCAGTGGCTGGAAGCTTCGCTATGGGAAGTCGTTCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp CCACGAATCTTCTCCACAACATCGTTTCTCCGGTGCTaGCGCAGGGCGCTAATTAGCTGGGCGAGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: PRIFSTTSFLRC*RRALISWARLA
Trigger: GGCCAGCCTCGCCCAGCTAATTAGCGCCCTGCGCCAGCACCGGAGAAACGATGTTGTGGAGAAGATTCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CAA 72 bp AGGGGCTCCGACTCATCCACGAAGAAGCCCTTGTTCTaGTCCTGTGGGGAAGGCTCCACCGTCAGGAGAGCG +
Preference number: 6 (lower is better)
Translates to: RGSDSSTKKPLF*SCGEGSTVRRA
Trigger: CGCTCTCCTGACGGTGGAGCCTTCCCCACAGGACAAGAACAAGGGCTTCTTCGTGGATGAGTCGGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CAA 72 bp CGGAGAAGGGGCTCCGACTCATCCACGAAGAAGCCCTaGTTCTTGTCCTGTGGGGAAGGCTCCACCGTCAGG +
Preference number: 6 (lower is better)
Translates to: RRRGSDSSTKKP*FLSCGEGSTVR
Trigger: CCTGACGGTGGAGCCTTCCCCACAGGACAAGAACAAGGGCTTCTTCGTGGATGAGTCGGAGCCCCTTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CAA 90 bp GAGTCACAGCGGAGAAGGGGCTCCGACTCATCCACGAAGAAGCCCTaGTTCTTGTCCTGTGGGGAAGGCTCCACCGTCAGGAGAGCGGAA +
Preference number: 6 (lower is better)
Translates to: ESQRRRGSDSSTKKP*FLSCGEGSTVRRAE
Trigger: TTCCGCTCTCCTGACGGTGGAGCCTTCCCCACAGGACAAGAACAAGGGCTTCTTCGTGGATGAGTCGGAGCCCCTTCTCCGCTGTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 72 bp GGCCGGTGGCACGGTCAACATGGCGGTATGTGCCAATaGGATTCGAGGCCTTCTGTTCTGGCTGAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: GRWHGQHGGMCQ*DSRPSVLAELW
Trigger: CCACAGCTCAGCCAGAACAGAAGGCCTCGAATCTCATTGGCACATACCGCCATGTTGACCGTGCCACCGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp AGCCCACGAATCTTCTCCACAACATCGTTTCTCCGGTaGTGGCGCAGGGCGCTAATTAGCTGGGCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SPRIFSTTSFLR*WRRALISWARL
Trigger: CAGCCTCGCCCAGCTAATTAGCGCCCTGCGCCAGCACCGGAGAAACGATGTTGTGGAGAAGATTCGTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp GAAAGATGGCTGTGCCAGGGGAAGGTGAGGTGGAGCTaGAGAAGGACGGGAGTGTGCCACAGACGTTGTCTG +
Preference number: 6 (lower is better)
Translates to: ERWLCQGKVRWS*RRTGVCHRRCL
Trigger: CAGACAACGTCTGTGGCACACTCCCGTCCTTCTCCAGCTCCACCTCACCTTCCCCTGGCACAGCCATCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CAA 72 bp GGGCTAAGCGGGCTGGGGCTCATCGGGAGAGCTAGTTaGTCAGTTTCCAGCTGGGTGGTGTCTTCCATCAGC +
Preference number: 6 (lower is better)
Translates to: GLSGLGLIGRAS*SVSSWVVSSIS
Trigger: GCTGATGGAAGACACCACCCAGCTGGAAACTGACAAACTAGCTCTCCCGATGAGCCCCAGCCCGCTTAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CAA 90 bp CAGCGGAGAAGGGGCTCCGACTCATCCACGAAGAAGCCCTTGTTCTaGTCCTGTGGGGAAGGCTCCACCGTCAGGAGAGCGGAATTCTCA +
Preference number: 6 (lower is better)
Translates to: QRRRGSDSSTKKPLF*SCGEGSTVRRAEFS
Trigger: TGAGAATTCCGCTCTCCTGACGGTGGAGCCTTCCCCACAGGACAAGAACAAGGGCTTCTTCGTGGATGAGTCGGAGCCCCTTCTCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp GGGGGCACAGGTAGCGTTAGACTGGAACATGCCAGGTaGGCAAGTGCATTCTCGGTCAGTCAAGGCAGCACA +
Preference number: 6 (lower is better)
Translates to: GGTGSVRLEHAR*ASAFSVSQGST
Trigger: TGTGCTGCCTTGACTGACCGAGAATGCACTTGCCCACCTGGCATGTTCCAGTCTAACGCTACCTGTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp TTCTTCCGCACACCCCAACCCACAGGACACACCGTATaGGGGGCACAGGTAGCGTTAGACTGGAACATGCCA +
Preference number: 6 (lower is better)
Translates to: FFRTPQPTGHTV*GAQVALDWNMP
Trigger: TGGCATGTTCCAGTCTAACGCTACCTGTGCCCCCCATACGGTGTGTCCTGTGGGTTGGGGTGTGCGGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp GTGGGGGCCTTGCTGGTGGTTGACTACCTGAAGGTTTaGGAGGGTCTTGTTCACGTCTTCCTTCCCCCTTGC +
Preference number: 6 (lower is better)
Translates to: VGALLVVDYLKV*EGLVHVFLPPC
Trigger: GCAAGGGGGAAGGAAGACGTGAACAAGACCCTCCCAAACCTTCAGGTAGTCAACCACCAGCAAGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp TCACAGGTTAGCACCTGGCCGGTGGCACGGTCAACATaGCGGTATGTGCCAATGAGATTCGAGGCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: SQVSTWPVARST*RYVPMRFEAFC
Trigger: ACAGAAGGCCTCGAATCTCATTGGCACATACCGCCATGTTGACCGTGCCACCGGCCAGGTGCTAACCTGTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp CCACAGGGCAACTGCTGCAGACGCGCAGGCTTGTGTTaGTACAATGCTCAGAGACATAGGTTCCTGCTGGAC +
Preference number: 6 (lower is better)
Translates to: PQGNCCRRAGLC*YNAQRHRFLLD
Trigger: GTCCAGCAGGAACCTATGTCTCTGAGCATTGTACCAACACAAGCCTGCGCGTCTGCAGCAGTTGCCCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp CGACTCATCCACGAAGAAGCCCTTGTTCTTGTCCTGTaGGGAAGGCTCCACCGTCAGGAGAGCGGAATTCTC +
Preference number: 6 (lower is better)
Translates to: RLIHEEALVLVL*GRLHRQESGIL
Trigger: GAGAATTCCGCTCTCCTGACGGTGGAGCCTTCCCCACAGGACAAGAACAAGGGCTTCTTCGTGGATGAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CAA 72 bp AGGTCCCCACAGGGCAACTGCTGCAGACGCGCAGGCTaGTGTTGGTACAATGCTCAGAGACATAGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: RSPQGNCCRRAG*CWYNAQRHRFL
Trigger: CAGGAACCTATGTCTCTGAGCATTGTACCAACACAAGCCTGCGCGTCTGCAGCAGTTGCCCTGTGGGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CAA 72 bp AAATGCTTGTGTAGGTTCTGTCTAGGATGTCCCCTCTaGGGGCCCTTGATGGGCGTGCTGGACTTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: KCLCRFCLGCPL*GPLMGVLDFSP
Trigger: GGGCGAGAAGTCCAGCACGCCCATCAAGGGCCCCAAGAGGGGACATCCTAGACAGAACCTACACAAGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 72 bp TGCCACAGACGTTGTCTGTCTCCTTGGTCCCCGGCTTaGTCACCACCAGGTTCTGACTCAGACAGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: CHRRCLSPWSPA*SPPGSDSDSLC
Trigger: ACACAGACTGTCTGAGTCAGAACCTGGTGGTGATCAAGCCGGGGACCAAGGAGACAGACAACGTCTGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 72 bp TGGGAGGGTCTTGTTCACGTCTTCCTTCCCCCTTGCTaGGCTTGTGTTGTCAGGGACTGTCCCTTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: WEGLVHVFLPPC*ACVVRDCPFLD
Trigger: ATCCAGGAAGGGACAGTCCCTGACAACACAAGCTCAGCAAGGGGGAAGGAAGACGTGAACAAGACCCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 72 bp TGTCTGTGGTGGGGGCCTTGCTGGTGGTTGACTACCTaGAGGTTTGGGAGGGTCTTGTTCACGTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: CLWWGPCWWLTT*RFGRVLFTSSF
Trigger: GAAGGAAGACGTGAACAAGACCCTCCCAAACCTTCAGGTAGTCAACCACCAGCAAGGCCCCCACCACAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CAA 90 bp GGGAGGGTCTTGTTCACGTCTTCCTTCCCCCTTGCTGAGCTTGTGTaGTCAGGGACTGTCCCTTCCTGGATGCTACTCAGTACCTTTGGT +
Preference number: 6 (lower is better)
Translates to: GRVLFTSSFPLAELV*SGTVPSWMLLSTFG
Trigger: ACCAAAGGTACTGAGTAGCATCCAGGAAGGGACAGTCCCTGACAACACAAGCTCAGCAAGGGGGAAGGAAGACGTGAACAAGACCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp CTAGAAGGCACATCTGAGAAGGTACCCCGAGCACACTaGTTACACCGCACATCCTCAGTCTCTGTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: LEGTSEKVPRAH*LHRTSSVSVPF
Trigger: GAAAGGGACAGAGACTGAGGATGTGCGGTGTAAGCAGTGTGCTCGGGGTACCTTCTCAGATGTGCCTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp GGATTTAGAAAGTGGAGCATGTCATCAAAGATAGGCTaGAAGTCACAGGGGTCCAGGCGTACCTGCCGCAAC +
Preference number: 6 (lower is better)
Translates to: GFRKWSMSSKIG*KSQGSRRTCRN
Trigger: GTTGCGGCAGGTACGCCTGGACCCCTGTGACTTGCAGCCTATCTTTGATGACATGCTCCACTTTCTAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CAA 72 bp TTGTTCACGTCTTCCTTCCCCCTTGCTGAGCTTGTGTaGTCAGGGACTGTCCCTTCCTGGATGCTACTCAGT +
Preference number: 6 (lower is better)
Translates to: LFTSSFPLAELV*SGTVPSWMLLS
Trigger: ACTGAGTAGCATCCAGGAAGGGACAGTCCCTGACAACACAAGCTCAGCAAGGGGGAAGGAAGACGTGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CAA 90 bp GCTTCCTGGCTCTTGACTCCAATAATTTCGAATAGCCGGTCTAGTTaGTCCTCAGCCTGGGGAATCTCTTCAATCACCCGCAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: ASWLLTPIISNSRSS*SSAWGISSITRSSS
Trigger: TGAGGAGCTGCGGGTGATTGAAGAGATTCCCCAGGCTGAGGACAAACTAGACCGGCTATTCGAAATTATTGGAGTCAAGAGCCAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 72 bp TATGTGCCAATGAGATTCGAGGCCTTCTGTTCTGGCTaGGCTGTGGTGGTGCTAAGGAATCCAAGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: YVPMRFEAFCSG*AVVVLRNPSRR
Trigger: TCTCCTGCTTGGATTCCTTAGCACCACCACAGCTCAGCCAGAACAGAAGGCCTCGAATCTCATTGGCACATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 72 bp GTCTCCTTGGTCCCCGGCTTGATCACCACCAGGTTCTaGCTCAGACAGTCTGTGTATGCTTTGCATTTCATC +
Preference number: 6 (lower is better)
Translates to: VSLVPGLITTRF*LRQSVYALHFI
Trigger: GATGAAATGCAAAGCATACACAGACTGTCTGAGTCAGAACCTGGTGGTGATCAAGCCGGGGACCAAGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 72 bp GTATGCTTTGCATTTCATCACACTAGAAGGCACATCTaGGAAGGTACCCCGAGCACACTGCTTACACCGCAC +
Preference number: 6 (lower is better)
Translates to: VCFAFHHTRRHI*EGTPSTLLTPH
Trigger: GTGCGGTGTAAGCAGTGTGCTCGGGGTACCTTCTCAGATGTGCCTTCTAGTGTGATGAAATGCAAAGCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp ATAATTTCGAATAGCCGGTCTAGTTTGTCCTCAGCCTaGGGAATCTCTTCAATCACCCGCAGCTCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: IISNSRSSLSSA*GISSITRSSSG
Trigger: TCCTGAGGAGCTGCGGGTGATTGAAGAGATTCCCCAGGCTGAGGACAAACTAGACCGGCTATTCGAAATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp ATTGCAGTAGTAGATCCATTTCTCCCGGTTCTGGGTTaGAGTCATGGATTTCTTCAGCCCTGCCTTTTCCAC +
Preference number: 6 (lower is better)
Translates to: IAVVDPFLPVLG*SHGFLQPCLFH
Trigger: GTGGAAAAGGCAGGGCTGAAGAAATCCATGACTCCAACCCAGAACCGGGAGAAATGGATCTACTACTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp CTGATAGATATCTTTCCACTGGCTTCCCACTTGGGCTaGTACAAGCTTCAGGATATCGATACCATGGCCATT +
Preference number: 6 (lower is better)
Translates to: LIDIFPLASHLG*YKLQDIDTMAI
Trigger: AATGGCCATGGTATCGATATCCTGAAGCTTGTAGCAGCCCAAGTGGGAAGCCAGTGGAAAGATATCTATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS CCA 72 bp TCTTCAATCACCCGCAGCTCCTCAGGATTTAGAAAGTaGAGCATGTCATCAAAGATAGGCTGCAAGTCACAG +
Preference number: 6 (lower is better)
Translates to: SSITRSSSGFRK*SMSSKIGCKSQ
Trigger: CTGTGACTTGCAGCCTATCTTTGATGACATGCTCCACTTTCTAAATCCTGAGGAGCTGCGGGTGATTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS TCA 72 bp CAAGGTAATTTCTCAATCATTGGCCATGGGCATGGCTaGCTACAGTCATGGCATTTCTCTATGCCATTCTCA +
Preference number: 6 (lower is better)
Translates to: QGNFSIIGHGHG*LQSWHFSMPFS
Trigger: TGAGAATGGCATAGAGAAATGCCATGACTGTAGTCAGCCATGCCCATGGCCAATGATTGAGAAATTACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp ACAATCATCCAGGGCAAATGCTCATTGATGTCAAAATaGTTGTGTAGGTTCTGTCTAGGATGTCCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: TIIQGKCSLMSK*LCRFCLGCPLL
Trigger: CAAGAGGGGACATCCTAGACAGAACCTACACAAGCATTTTGACATCAATGAGCATTTGCCCTGGATGATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2
CDS GCA 72 bp ACCAGCAGCAGGAAAAGCACAATCATCCAGGGCAAATaGTCATTGATGTCAAAATGCTTGTGTAGGTTCTGT +
Preference number: 6 (lower is better)
Translates to: TSSRKSTIIQGK*SLMSKCLCRFC
Trigger: ACAGAACCTACACAAGCATTTTGACATCAATGAGCATTTGCCCTGGATGATTGTGCTTTTCCTGCTGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296861.2