RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFRSF19 (Homo sapiens)

Ensembl gene IDs: ENSG00000127863

Ensembl transcript IDs: ENST00000248484.9, ENST00000382258.8, ENST00000382263.3, ENST00000403372.6, ENST00000464735.1

Found 509 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTaGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCC +
Preference number: 1 (lower is better)
Translates to: LLSLVNELLQHKKPQ*LCPFSHTHYPTQPS
Trigger: GGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR GCA 90 bp ACTTGGTTGCTCTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTaGAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGC +
Preference number: 1 (lower is better)
Translates to: TWLLLKSSSVLSTSF*STRSHSGYAHSATR
Trigger: GCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAGAGCAACCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CCA 90 bp CTGGCTCAGAAGCAACTGGCTGAAAGGCTTCAAATGCCGTCAGTTTaGTTCAGATTTATTTTTGCCCCAGAAGCCATGCAAGGTCCAGAC +
Preference number: 1 (lower is better)
Translates to: LAQKQLAERLQMPSV*FRFIFAPEAMQGPD
Trigger: GTCTGGACCTTGCATGGCTTCTGGGGCAAAAATAAATCTGAACCAAACTGACGGCATTTGAAGCCTTTCAGCCAGTTGCTTCTGAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR GCA 90 bp TTACAGCTGGTCTGGCTCAGAAGCAACTGGCTGAAAGGCTTCAAATaGCGTCAGTTTGGTTCAGATTTATTTTTGCCCCAGAAGCCATGC +
Preference number: 1 (lower is better)
Translates to: LQLVWLRSNWLKGFK*RQFGSDLFLPQKPC
Trigger: GCATGGCTTCTGGGGCAAAAATAAATCTGAACCAAACTGACGGCATTTGAAGCCTTTCAGCCAGTTGCTTCTGAGCCAGACCAGCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR GCA 90 bp TGGTTCAGATTTATTTTTGCCCCAGAAGCCATGCAAGGTCCAGACTaGTCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAG +
Preference number: 1 (lower is better)
Translates to: WFRFIFAPEAMQGPD*SVHKPNKGVLFGFQ
Trigger: CTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGAGCAGTCTGGACCTTGCATGGCTTCTGGGGCAAAAATAAATCTGAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATCCGACACAGCCCTCCTaGCATCGGCACTCTAGCAGC +
Preference number: 2 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHPTQPS*HRHSSS
Trigger: GCTGCTAGAGTGCCGATGTCAGGAGGGCTGTGTCGG...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACCGACACAGCCCTCCTaGCATCGGCACTCTAGCAGC +
Preference number: 2 (lower is better)
Translates to: CQRASAAQEATVVMPIQPPTQPS*HRHSSS
Trigger: GCTGCTAGAGTGCCGATGTCAGGAGGGCTGTGTCGG...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTTCAGAAGCAACTGGCTaGAAGGCTTCAAATGCCGTC +
Preference number: 2 (lower is better)
Translates to: SHSGYAHSATRITRHSPPSEATG*KASNAV
Trigger: GACGGCATTTGAAGCCTTTCAGCCAGTTGCTTCTGA...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTAGGGAATTGAGGTCATaGGATGTACCAGACACAGGC +
Preference number: 2 (lower is better)
Translates to: SHSGYAHSATRITRHSPPRELRS*DVPDTG
Trigger: GCCTGTGTCTGGTACATCTCATGACCTCAATTCCCT...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTTGCCCCAGAAGCCATaGAAGGTCCAGACTGCTCAG +
Preference number: 2 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHLPQKP*KVQTAQ
Trigger: CTGAGCAGTCTGGACCTTGCATGGCTTCTGGGGCAA...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTAGATGCAGAGTATCATaGGTCGGCCTGGAGTCTTTT +
Preference number: 2 (lower is better)
Translates to: SHSGYAHSATRITRHSPPRCRVS*VGLESF
Trigger: AAAAGACTCCAGGCCGACTCATGATACTCTGCATCT...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCAGGCACTAGGTTGACATaGCCGCTTGGGGCTACAATG +
Preference number: 2 (lower is better)
Translates to: CQRASAAQEATVVMPIQPGTRLT*PLGATM
Trigger: CATTGTAGCCCCAAGCGGTCATGTCAACCTAGTGCC...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTGTATGTGAATCATGGTaGGGTCACGCGAGGAAACTA +
Preference number: 2 (lower is better)
Translates to: SHSGYAHSATRITRHSPPVCESW*GHARKL
Trigger: TAGTTTCCTCGCGTGACCTCACCATGATTCACATAC...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATAGCTTACAGCTGGTCTaGCTCAGAAGCAACTGGCTG +
Preference number: 2 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHSLQLV*LRSNWL
Trigger: CAGCCAGTTGCTTCTGAGCCAGACCAGCTGTAAGCT...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTAAAGGAACACAGCCCTaGCTACTTTCATCATCTCTC +
Preference number: 2 (lower is better)
Translates to: SHSGYAHSATRITRHSPPKGTQP*LLSSSL
Trigger: GAGAGATGATGAAAGTAGGCAGGGCTGTGTTCCTTT...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATCCATTCCCTGCTTTGTaGCTGAACGGGGTTAATTTC +
Preference number: 2 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHPFPAL*LNGVNF
Trigger: GAAATTAACCCCGTTCAGTCACAAAGCAGGGAATGG...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCATTCCCTGCTTTGTaGCTGAACGGGGTTAATTTC +
Preference number: 2 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQPFPAL*LNGVNF
Trigger: GAAATTAACCCCGTTCAGTCACAAAGCAGGGAATGG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGCACAATCTCATAGGCTaGCAGCTCAACCCATCCGTC +
Preference number: 2 (lower is better)
Translates to: LEILLSLVNELLQHKKPQHNLIG*QLNPSV
Trigger: GACGGATGGGTTGAGCTGGCAGCCTATGAGATTGTG...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATCAAAGGAGTACTCTTTaGGTTCCAGCACACGCTTCT +
Preference number: 2 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHQRSTL*VPAHAS
Trigger: AGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTG...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTGGCTCAGAAGCAACTaGCTGAAAGGCTTCAAATGC +
Preference number: 2 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHWLRSN*LKGFKC
Trigger: GCATTTGAAGCCTTTCAGCCAGTTGCTTCTGAGCCA...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGTCATTCCCATCAGTCTaGCTTTCTCCAGCCAGTGTT +
Preference number: 2 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQSFPSV*LSPASV
Trigger: AACACTGGCTGGAGAAAGCCAGACTGATGGGAATGA...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCATGGCTCAGAAGCAACTaGCTGAAAGGCTTCAAATGC +
Preference number: 2 (lower is better)
Translates to: CQRASAAQEATVVMPIQPWLRSN*LKGFKC
Trigger: GCATTTGAAGCCTTTCAGCCAGTTGCTTCTGAGCCA...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCAGTTTCAGCTTACAGCTaGTCTGGCTCAGAAGCAACT +
Preference number: 2 (lower is better)
Translates to: CQRASAAQEATVVMPIQPVSAYS*SGSEAT
Trigger: AGTTGCTTCTGAGCCAGACCAGCTGTAAGCTGAAAC...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTTATCATGAGTCGGCCTaGAGTCTTTTCTTGTTATTC +
Preference number: 2 (lower is better)
Translates to: SHSGYAHSATRITRHSPPYHESA*SLFLLF
Trigger: GAATAACAAGAAAAGACTCCAGGCCGACTCATGATA...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATCTGAGGTCAGAAGTGTaGATTCTGGAAAGAGCTATC +
Preference number: 2 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHLRSEV*ILERAI
Trigger: GATAGCTCTTTCCAGAATCCACACTTCTGACCTCAG...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCATCTAGTCCTAACATGTaGTGTGTTCTCACGGAAGGC +
Preference number: 2 (lower is better)
Translates to: CQRASAAQEATVVMPIQPSSPNM*CVLTEG
Trigger: GCCTTCCGTGAGAACACACCACATGTTAGGACTAGA...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGAGATGCAGAGTATCATaGGTCGGCCTGGAGTCTTTT +
Preference number: 2 (lower is better)
Translates to: LEILLSLVNELLQHKKPQRCRVS*VGLESF
Trigger: AAAAGACTCCAGGCCGACTCATGATACTCTGCATCT...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTCCCTGCTTTGTGACTaGACGGGGTTAATTTCTGTC +
Preference number: 2 (lower is better)
Translates to: LEILLSLVNELLQHKKPQSLLCD*TGLISV
Trigger: GACAGAAATTAACCCCGTTCAGTCACAAAGCAGGGA...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGGTATGTGAATCATGGTaGGGTCACGCGAGGAAACTA +
Preference number: 2 (lower is better)
Translates to: LEILLSLVNELLQHKKPQVCESW*GHARKL
Trigger: TAGTTTCCTCGCGTGACCTCACCATGATTCACATAC...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGATGCAAGGTCCAGACTaGTCAGTCCATAAGCCTAAC +
Preference number: 2 (lower is better)
Translates to: LEILLSLVNELLQHKKPQMQGPD*SVHKPN
Trigger: GTTAGGCTTATGGACTGAGCAGTCTGGACCTTGCAT...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGGTTCAGATTTATTTTTaGCCCAGAAGCCATGCAAGG +
Preference number: 2 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQVQIYF*PRSHAR
Trigger: CCTTGCATGGCTTCTGGGGCAAAAATAAATCTGAAC...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATGTTCAGATTTATTTTTaGCCCAGAAGCCATGCAAGG +
Preference number: 2 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHVQIYF*PRSHAR
Trigger: CCTTGCATGGCTTCTGGGGCAAAAATAAATCTGAAC...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCTGAAAGGCTTCAAATaGCGTCAGTTTGGTTCAGAT +
Preference number: 2 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQLKGFK*RQFGSD
Trigger: ATCTGAACCAAACTGACGGCATTTGAAGCCTTTCAG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGAGGCAGAGGGACAGATaGAACAAATGTTTCTATAGC +
Preference number: 2 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQRQRDR*NKCFYS
Trigger: GCTATAGAAACATTTGTTGCATCTGTCCCTCTGCCT...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTCTAGTCCTAACATGTaGTGTGTTCTCACGGAAGGC +
Preference number: 2 (lower is better)
Translates to: LEILLSLVNELLQHKKPQSSPNM*CVLTEG
Trigger: GCCTTCCGTGAGAACACACCACATGTTAGGACTAGA...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTCAAAACCTAAAACTATaGAGAAACGGCCACAAGAAA +
Preference number: 2 (lower is better)
Translates to: SHSGYAHSATRITRHSPPQNLKL*RNGHKK
Trigger: TTTCTTGTGGCCGTTTCTCCATAGTTTTAGGTTTTG...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTCATTCCCATCAGTCTaGCTTTCTCCAGCCAGTGTT +
Preference number: 2 (lower is better)
Translates to: LEILLSLVNELLQHKKPQSFPSV*LSPASV
Trigger: AACACTGGCTGGAGAAAGCCAGACTGATGGGAATGA...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 90 bp TGGCTGAAAGGCTTCAAATGCCGTCAGTTTGGTTCAGATTTATTTTaGCCCCAGAAGCCATGCAAGGTCCAGACTGCTCAGTCCATAAGC +
Preference number: 2 (lower is better)
Translates to: WLKGFKCRQFGSDLF*PQKPCKVQTAQSIS
Trigger: GCTTATGGACTGAGCAGTCTGGACCTTGCATGGCTTCTGGGGCAAAAATAAATCTGAACCAAACTGACGGCATTTGAAGCCTTTCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATCACAATCTCATAGGCTaGCAGCTCAACCCATCCGTC +
Preference number: 2 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYHNLIG*QLNPSV
Trigger: GACGGATGGGTTGAGCTGGCAGCCTATGAGATTGTG...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGGTTGACATGACCGCTTaGGGCTACAATGAAACATTC +
Preference number: 2 (lower is better)
Translates to: LEILLSLVNELLQHKKPQVDMTA*GYNETF
Trigger: GAATGTTTCATTGTAGCCCCAAGCGGTCATGTCAAC...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACCAGATTTCAAACAGTaGCACGTATGTGAATCATGG +
Preference number: 2 (lower is better)
Translates to: CQRASAAQEATVVMPIQPPDFKQ*HVCESW
Trigger: CCATGATTCACATACGTGCCACTGTTTGAAATCTGG...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 90 bp ATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATaGAGGTTTCAGCTTACAGCTGGTCTGGCTCAGAAGCAACTGGCT +
Preference number: 2 (lower is better)
Translates to: MQSIMSRPGVFSCYS*RFQLTAGLAQKQLA
Trigger: AGCCAGTTGCTTCTGAGCCAGACCAGCTGTAAGCTGAAACCTCAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGATGCAAGGTCCAGACTaGTCAGTCCATAAGCCTAAC +
Preference number: 2 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRMQGPD*SVHKPN
Trigger: GTTAGGCTTATGGACTGAGCAGTCTGGACCTTGCAT...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGGTTCAGATTTATTTTTaGCCCAGAAGCCATGCAAGG +
Preference number: 2 (lower is better)
Translates to: LEILLSLVNELLQHKKPQVQIYF*PRSHAR
Trigger: CCTTGCATGGCTTCTGGGGCAAAAATAAATCTGAAC...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCAAAGGAGTACTCTTTaGGTTCCAGCACACGCTTCT +
Preference number: 2 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRQRSTL*VPAHAS
Trigger: AGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCAAATGCCGTCAGTTTaGTTCAGATTTATTTTTGCC +
Preference number: 2 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQQMPSV*FRFIFA
Trigger: GGCAAAAATAAATCTGAACCAAACTGACGGCATTTG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAGTTAATTCTGGGCAATaGGCTGCCCTTTCTCGACCA +
Preference number: 2 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTVNSGQ*AALSRP
Trigger: TGGTCGAGAAAGGGCAGCCCATTGCCCAGAATTAAC...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTCAGGGCTCTACATATaGAAAATATATACAGGCTAC +
Preference number: 2 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHSGLYI*KIYTGY
Trigger: GTAGCCTGTATATATTTTCCATATGTAGAGCCCTGA...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 90 bp CGGATGGCTAAAGTAGGAGATGATGTGCTAACTAATCTTACACAATaGGAAGGAGCACGACAATGTCCTGGTCAAACTACACTAGGGCAG +
Preference number: 2 (lower is better)
Translates to: RMAKVGDDVLTNLTQ*EGARQCPGQTTLGQ
Trigger: CTGCCCTAGTGTAGTTTGACCAGGACATTGTCGTGCTCCTTCCAATTGTGTAAGATTAGTTAGCACATCATCTCCTACTTTAGCCATCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATTCCCTGCTTTGTGACTaGACGGGGTTAATTTCTGTC +
Preference number: 2 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYSLLCD*TGLISV
Trigger: GACAGAAATTAACCCCGTTCAGTCACAAAGCAGGGA...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATGTATGTGAATCATGGTaGGGTCACGCGAGGAAACTA +
Preference number: 2 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYVCESW*GHARKL
Trigger: TAGTTTCCTCGCGTGACCTCACCATGATTCACATAC...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATCAAAGGAGTACTCTTTaGGTTCCAGCACACGCTTCT +
Preference number: 2 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYQRSTL*VPAHAS
Trigger: AGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTG...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAGTTTCAGCTTACAGCTaGTCTGGCTCAGAAGCAACT +
Preference number: 2 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTVSAYS*SGSEAT
Trigger: AGTTGCTTCTGAGCCAGACCAGCTGTAAGCTGAAAC...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 90 bp TGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTaGTTATTCATTGAGGTTTCAGCTTACAGCTGGTCTGGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: CRKDAEYHESAWSLF*LFIEVSAYSWSGSE
Trigger: TTCTGAGCCAGACCAGCTGTAAGCTGAAACCTCAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 90 bp AAAATTCATGACTTTACTTGGTTGCTCTTGAAATCCTCCTCAGTCTaGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCC +
Preference number: 2 (lower is better)
Translates to: KIHDFTWLLLKSSSV*STSFCSTRSHSGYA
Trigger: GGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAGAGCAACCAAGTAAAGTCATGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATTGCCCCAGAAGCCATaGAAGGTCCAGACTGCTCAG +
Preference number: 2 (lower is better)
Translates to: TRHRQASKHISKPKTMEKLPQKP*KVQTAQ
Trigger: CTGAGCAGTCTGGACCTTGCATGGCTTCTGGGGCAA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGTGGCTCAGAAGCAACTaGCTGAAAGGCTTCAAATGC +
Preference number: 2 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLWLRSN*LKGFKC
Trigger: GCATTTGAAGCCTTTCAGCCAGTTGCTTCTGAGCCA...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTAGCTTACAGCTGGTCTaGCTCAGAAGCAACTGGCTG +
Preference number: 2 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCSLQLV*LRSNWL
Trigger: CAGCCAGTTGCTTCTGAGCCAGACCAGCTGTAAGCT...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 90 bp GGCCAAAGTCTCATTCCCATCAGTCTGGCTTTCTCCAGCCAGTGTTaGTCCTTGAAGTTAATCAGGGCTCTACATATGGAAAATATATAC +
Preference number: 2 (lower is better)
Translates to: GQSLIPISLAFSSQC*SLKLIRALHMENIY
Trigger: GTATATATTTTCCATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGACTGATGGGAATGAGACTTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACACTGAAAGGCTTCAAATaGCGTCAGTTTGGTTCAGAT +
Preference number: 2 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTLKGFK*RQFGSD
Trigger: ATCTGAACCAAACTGACGGCATTTGAAGCCTTTCAG...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAAGCTTACAGCTGGTCTaGCTCAGAAGCAACTGGCTG +
Preference number: 2 (lower is better)
Translates to: TRHRQASKHISKPKTMEKSLQLV*LRSNWL
Trigger: CAGCCAGTTGCTTCTGAGCCAGACCAGCTGTAAGCT...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTGTTAATTCTGGGCAATaGGCTGCCCTTTCTCGACCA +
Preference number: 2 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCVNSGQ*AALSRP
Trigger: TGGTCGAGAAAGGGCAGCCCATTGCCCAGAATTAAC...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 90 bp AGTCTCATTCCCATCAGTCTGGCTTTCTCCAGCCAGTGTTTGTCCTaGAAGTTAATCAGGGCTCTACATATGGAAAATATATACAGGCTA +
Preference number: 2 (lower is better)
Translates to: SLIPISLAFSSQCLS*KLIRALHMENIYRL
Trigger: TAGCCTGTATATATTTTCCATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGACTGATGGGAATGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATCAGAAGCAACTGGCTaGAAGGCTTCAAATGCCGTC +
Preference number: 2 (lower is better)
Translates to: TRHRQASKHISKPKTMEKSEATG*KASNAV
Trigger: GACGGCATTTGAAGCCTTTCAGCCAGTTGCTTCTGA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATTATCATGAGTCGGCCTaGAGTCTTTTCTTGTTATTC +
Preference number: 2 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYYHESA*SLFLLF
Trigger: GAATAACAAGAAAAGACTCCAGGCCGACTCATGATA...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGAGATGCAGAGTATCATaGGTCGGCCTGGAGTCTTTT +
Preference number: 2 (lower is better)
Translates to: RCTRHRQASKHISKPKTMRCRVS*VGLESF
Trigger: AAAAGACTCCAGGCCGACTCATGATACTCTGCATCT...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAATGCAAGGTCCAGACTaGTCAGTCCATAAGCCTAAC +
Preference number: 2 (lower is better)
Translates to: TRHRQASKHISKPKTMEKMQGPD*SVHKPN
Trigger: GTTAGGCTTATGGACTGAGCAGTCTGGACCTTGCAT...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATCAAATGCCGTCAGTTTaGTTCAGATTTATTTTTGCC +
Preference number: 2 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYQMPSV*FRFIFA
Trigger: GGCAAAAATAAATCTGAACCAAACTGACGGCATTTG...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTCAGAAGTGTGGATTCTaGAAAGAGCTATCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCQKCGF*KELSSS
Trigger: AGAGGAGGATAGCTCTTTCCAGAATCCACACTTCTG...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATCAAAACCTAAAACTATaGAGAAACGGCCACAAGAAA +
Preference number: 2 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYQNLKL*RNGHKK
Trigger: TTTCTTGTGGCCGTTTCTCCATAGTTTTAGGTTTTG...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR TCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGAAAGTTAAAAGACAGTaGCTTGGGCAGGGCAATTCC +
Preference number: 2 (lower is better)
Translates to: RCTRHRQASKHISKPKTMKVKRQ*LGQGNS
Trigger: GGAATTGCCCTGCCCAAGTCACTGTCTTTTAACTTT...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTCTGAAAGGCTTCAAATaGCGTCAGTTTGGTTCAGAT +
Preference number: 2 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCLKGFK*RQFGSD
Trigger: ATCTGAACCAAACTGACGGCATTTGAAGCCTTTCAG...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAACTGAGGTCAGAAGTGTaGATTCTGGAAAGAGCTATC +
Preference number: 2 (lower is better)
Translates to: TRHRQASKHISKPKTMEKLRSEV*ILERAI
Trigger: GATAGCTCTTTCCAGAATCCACACTTCTGACCTCAG...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR GCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGAGGCAGAGGGACAGATaGAACAAATGTTTCTATAGC +
Preference number: 2 (lower is better)
Translates to: RCTRHRQASKHISKPKTMRQRDR*NKCFYS
Trigger: GCTATAGAAACATTTGTTGCATCTGTCCCTCTGCCT...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTTTGAAGTCACTTTTGTaGCAGAGAAGCTTCTCATGT +
Preference number: 2 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCLKSLL*QRSFSC
Trigger: ACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAA...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGTATCATGAGTCGGCCTaGAGTCTTTTCTTGTTATTC +
Preference number: 2 (lower is better)
Translates to: RCTRHRQASKHISKPKTMYHESA*SLFLLF
Trigger: GAATAACAAGAAAAGACTCCAGGCCGACTCATGATA...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATTGAAGTCACTTTTGTaGCAGAGAAGCTTCTCATGT +
Preference number: 2 (lower is better)
Translates to: TRHRQASKHISKPKTMEKLKSLL*QRSFSC
Trigger: ACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGCTAATCTTACACAATTaGAAGGAGCACGACAATGTC +
Preference number: 2 (lower is better)
Translates to: RCTRHRQASKHISKPKTMLILHN*KEHDNV
Trigger: GACATTGTCGTGCTCCTTCCAATTGTGTAAGATTAG...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAGTAGATGGTAGGGGATaGAGCACTTTAATAGAAAGA +
Preference number: 2 (lower is better)
Translates to: TRHRQASKHISKPKTMEKVDGRG*STLIER
Trigger: TCTTTCTATTAAAGTGCTCCATCCCCTACCATCTAC...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR TCA 72 bp CTTTCTCGACCACATTCCCTAGCCCAGGTGTTCTCCTaGGATCAGCGGGTGTTCATGAGACCGAGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: LSRPHSLAQVFS*DQRVFMRPRLR
Trigger: CCTCAGCCTCGGTCTCATGAACACCCGCTGATCTCAGGAGAACACCTGGGCTAGGGAATGTGGTCGAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR GCA 72 bp AACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATaGCCATTCAGCCACACGCATTACCCGACACAGCCC +
Preference number: 3 (lower is better)
Translates to: NELLQHKKPQWL*PFSHTHYPTQP
Trigger: GGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CCA 72 bp CTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTaGTTATGCCCATTCAGCCACACGCATTACCCGACA +
Preference number: 3 (lower is better)
Translates to: LVNELLQHKKPQ*LCPFSHTHYPT
Trigger: TGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTTCTTTGAAGTCACTTTaGTGGCAGAGAAGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: SHSGYAHSATRITRHSPPSLKSL*WQRSFS
Trigger: TGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGA...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTGCCTGGAGTCTTTTCTaGTTATTCATTGAGGTTTCA +
Preference number: 3 (lower is better)
Translates to: SHSGYAHSATRITRHSPPAWSLF*LFIEVS
Trigger: TGAAACCTCAATGAATAACAAGAAAAGACTCCAGGC...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CCA 72 bp GGTTTCAGCTTACAGCTGGTCTGGCTCAGAAGCAACTaGCTGAAAGGCTTCAAATGCCGTCAGTTTGGTTCA +
Preference number: 3 (lower is better)
Translates to: GFSLQLVWLRSN*LKGFKCRQFGS
Trigger: TGAACCAAACTGACGGCATTTGAAGCCTTTCAGCCAGTTGCTTCTGAGCCAGACCAGCTGTAAGCTGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CCA 72 bp GCCAGCTCAACCCATCCGTCTTTGAAGTCACTTTTGTaGCAGAGAAGCTTCTCATGTAGGAAAGATGCAGAG +
Preference number: 3 (lower is better)
Translates to: ASSTHPSLKSLL*QRSFSCRKDAE
Trigger: CTCTGCATCTTTCCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGAGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGACAAAGGAGTACTCTTaGGGTTCCAGCACACGCTTC +
Preference number: 3 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRTKEYS*GSSTRF
Trigger: GAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGT...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCATCTTTGAAGTCACTTTaGTGGCAGAGAAGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: CQRASAAQEATVVMPIQPSLKSL*WQRSFS
Trigger: TGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGA...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTTAAAAGACAGTGACTaGGGCAGGGCAATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: LEILLSLVNELLQHKKPQLKDSD*GRAIPN
Trigger: GTTTGGAATTGCCCTGCCCAAGTCACTGTCTTTTAA...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTTCTCCAGCCAGTGTTaGTCCTTGAAGTTAATCAGG +
Preference number: 3 (lower is better)
Translates to: LEILLSLVNELLQHKKPQFSSQC*SLKLIR
Trigger: CCTGATTAACTTCAAGGACAAACACTGGCTGGAGAA...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCAGATGTTTTGGGATTTTaGGCCAAAGTCTCATTCCCA +
Preference number: 3 (lower is better)
Translates to: CQRASAAQEATVVMPIQPDVLGF*AKVSFP
Trigger: TGGGAATGAGACTTTGGCCAAAAATCCCAAAACATC...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAACAAAGGAGTACTCTTaGGGTTCCAGCACACGCTTC +
Preference number: 3 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTTKEYS*GSSTRF
Trigger: GAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGT...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGACTAATCTTACACAATaGGAAGGAGCACGACAATGT +
Preference number: 3 (lower is better)
Translates to: LEILLSLVNELLQHKKPQTNLTQ*EGARQC
Trigger: ACATTGTCGTGCTCCTTCCAATTGTGTAAGATTAGT...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATGGTTCAGATTTATTTTaGCCCCAGAAGCCATGCAAG +
Preference number: 3 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYGSDLF*PQKPCK
Trigger: CTTGCATGGCTTCTGGGGCAAAAATAAATCTGAACC...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATTTAAAAGACAGTGACTaGGGCAGGGCAATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYLKDSD*GRAIPN
Trigger: GTTTGGAATTGCCCTGCCCAAGTCACTGTCTTTTAA...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR GCA 72 bp TTTATTTTTGCCCCAGAAGCCATGCAAGGTCCAGACTaGTCAGTCCATAAGCCTAACAAAGGAGTACTCTTT +
Preference number: 3 (lower is better)
Translates to: FIFAPEAMQGPD*SVHKPNKGVLF
Trigger: AAAGAGTACTCCTTTGTTAGGCTTATGGACTGAGCAGTCTGGACCTTGCATGGCTTCTGGGGCAAAAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR GCA 72 bp CCTGACATCGGCACTCTAGCAGCTGAGTTTATTGAGTaGTATGGGATATTCCAACAAAGTGAAGTGCAAATT +
Preference number: 3 (lower is better)
Translates to: PDIGTLAAEFIE*YGIFQQSEVQI
Trigger: AATTTGCACTTCACTTTGTTGGAATATCCCATAGCACTCAATAAACTCAGCTGCTAGAGTGCCGATGTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATGCCTGGAGTCTTTTCTaGTTATTCATTGAGGTTTCA +
Preference number: 3 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYAWSLF*LFIEVS
Trigger: TGAAACCTCAATGAATAACAAGAAAAGACTCCAGGC...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTTCAACCCATCCGTCTTaGAAGTCACTTTTGTGGCAG +
Preference number: 3 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCSTHPS*KSLLWQ
Trigger: CTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR GCA 72 bp TTCTGTTTCTTGTTATATGTCCACAATCTCATAGGCTaGCAGCTCAACCCATCCGTCTTTGAAGTCACTTTT +
Preference number: 3 (lower is better)
Translates to: FCFLLYVHNLIG*QLNPSVFEVTF
Trigger: AAAAGTGACTTCAAAGACGGATGGGTTGAGCTGGCAGCCTATGAGATTGTGGACATATAACAAGAAACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTGGTTCAGATTTATTTTaGCCCCAGAAGCCATGCAAG +
Preference number: 3 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCGSDLF*PQKPCK
Trigger: CTTGCATGGCTTCTGGGGCAAAAATAAATCTGAACC...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATTCAAATGCCGTCAGTTaGGTTCAGATTTATTTTTGC +
Preference number: 3 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYSNAVS*VQIYFC
Trigger: GCAAAAATAAATCTGAACCAAACTGACGGCATTTGA...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGTCAACCCATCCGTCTTaGAAGTCACTTTTGTGGCAG +
Preference number: 3 (lower is better)
Translates to: RCTRHRQASKHISKPKTMSTHPS*KSLLWQ
Trigger: CTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAGGTTCAGATTTATTTTaGCCCCAGAAGCCATGCAAG +
Preference number: 3 (lower is better)
Translates to: TRHRQASKHISKPKTMEKGSDLF*PQKPCK
Trigger: CTTGCATGGCTTCTGGGGCAAAAATAAATCTGAACC...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CCA 72 bp GGCAAGCTAGTAAACACATATCAAAACCTAAAACTATaGAGAAACGGCCACAAGAAAGAGGGCTCATTAAAT +
Preference number: 3 (lower is better)
Translates to: GKLVNTYQNLKL*RNGHKKEGSLN
Trigger: ATTTAATGAGCCCTCTTTCTTGTGGCCGTTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTTCAAATGCCGTCAGTTaGGTTCAGATTTATTTTTGC +
Preference number: 3 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCSNAVS*VQIYFC
Trigger: GCAAAAATAAATCTGAACCAAACTGACGGCATTTGA...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR-3UTR CAA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGTCAAATGCCGTCAGTTaGGTTCAGATTTATTTTTGC +
Preference number: 3 (lower is better)
Translates to: RCTRHRQASKHISKPKTMSNAVS*VQIYFC
Trigger: GCAAAAATAAATCTGAACCAAACTGACGGCATTTGA...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTACCGGCCCGCAGGTCTaGACTGAGTCACGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPTGPQV*TESRRH
Trigger: GTGCCGCCGTGACTCAGTGCAGACCTGCGGGCCGGT...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTAGCCCCAGTCCTCCTTaGACCTGTGCAGCCGGCACG +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPSPSPP*TCAAGT
Trigger: CGTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGCT...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACAGCGCCGTGTCCCGTaGGCTGGAGGCCGTGGACGC +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPQRRVP*AGGRGR
Trigger: GCGTCCACGGCCTCCAGCCCACGGGACACGGCGCTG...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCGCAGGTCTGCACTaGGTCACGGCGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQPAGLH*VTAALA
Trigger: TGCCAGTGCCGCCGTGACTCAGTGCAGACCTGCGGG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTCTCCCCGGCTGGGCCTaGGTTTCTTGCCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPLPGWA*VSCLKT
Trigger: AGTCTTCAGGCAAGAAACGCAGGCCCAGCCGGGGAG...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCAAGCCCCAGTCCTCCTTaGACCTGTGCAGCCGGCACG +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPSPSPP*TCAAGT
Trigger: CGTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGCT...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCGACACAGCCCTCCTaGCATCGGCACTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQPTQPS*HRHSSS
Trigger: GCTGCTAGAGTGCCGATGTCAGGAGGGCTGTGTCGG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGACCGGCCCGCAGGTCTaGACTGAGTCACGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQTGPQV*TESRRH
Trigger: GTGCCGCCGTGACTCAGTGCAGACCTGCGGGCCGGT...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATGTGGGCTGGAGGCCGTaGACGCGATCTTCACGAGGT +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHVGWRP*TRSSRG
Trigger: ACCTCGTGAAGATCGCGTCCACGGCCTCCAGCCCAC...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGCCGTGTCCCGTGGGCTaGAGGCCGTGGACGCGATCT +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQPCPVG*RPWTRS
Trigger: AGATCGCGTCCACGGCCTCCAGCCCACGGGACACGG...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCAGCGCCGTGTCCCGTaGGCTGGAGGCCGTGGACGC +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRQRRVP*AGGRGR
Trigger: GCGTCCACGGCCTCCAGCCCACGGGACACGGCGCTG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCTCACAGCACATGGATaGGAGCAAGCGCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQLTAHG*EQAHRP
Trigger: GGGCCGGTGCGCTTGCTCCCATCCATGTGCTGTGAG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCACCATCTCCCCGGCTaGGCCTGCGTTTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQHHLPG*ACVSCL
Trigger: CAGGCAAGAAACGCAGGCCCAGCCGGGGAGATGGTG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCATTCTTCCCAGCCACCTaGGAGGCTGCAGGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPFFPAT*EAAGPG
Trigger: GCCCGGACCTGCAGCCTCCCAGGTGGCTGGGAAGAA...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382263.3
CDS-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTCCTGCGTTTCTTGCCTaGAGACTGGCTGCAGAATGC +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPPAFLA*RLAAEC
Trigger: GCATTCTGCAGCCAGTCTTCAGGCAAGAAACGCAGG...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTCACAGATGGACTGCGTaGGGGATCCGAAGAAAGTCG +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPHRWTA*GIRRKS
Trigger: CGACTTTCTTCGGATCCCTCACGCAGTCCATCTGTG...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTCAGAGGCCAGGCATCTaGAAACTCGCCACAGATGGA +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPQRPGI*KLATDG
Trigger: TCCATCTGTGGCGAGTTTTCAGATGCCTGGCCTCTG...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTCTGGCCCACACTGGTTaGAGGGAACACAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPLAHTG*REHSFQ
Trigger: CTGGAAACTGTGTTCCCTGCAACCAGTGTGGGCCAG...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000382263.3
CDS-3UTR GCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTTGCCTGAAGACTGGCTaGAGAATGCACCCCACAACC +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPCLKTG*RMHPTT
Trigger: GGTTGTGGGGTGCATTCTGCAGCCAGTCTTCAGGCA...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAAGCCACCTGGGAGGCTaGAGGTCCGGGCCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTSHLGG*RSGPEP
Trigger: GGGCTCCGGCCCGGACCTGCAGCCTCCCAGGTGGCT...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382263.3
CDS-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCAGTGGGCTGGAGGCCGTaGACGCGATCTTCACGAGGT +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPVGWRP*TRSSRG
Trigger: ACCTCGTGAAGATCGCGTCCACGGCCTCCAGCCCAC...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGCAAGAGTCGCCGGGTTaGGGCTGCAGGCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQQESPG*GCRPPH
Trigger: GTGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTG...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGGTACTGAATGTCCTGTaGCCGCAGAGACCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQVLNVL*PQRPAG
Trigger: CCCAGCTGGTCTCTGCGGTCACAGGACATTCAGTAC...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTTCAGAGCCGTTGTACTaGATGTCCTGTGACCGCAGA +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPSEPLY*MSCDRR
Trigger: TCTGCGGTCACAGGACATTCAGTACAACGGCTCTGA...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCCCGCAGGTCTGCACTaGGTCACGGCGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRPAGLH*VTAALA
Trigger: TGCCAGTGCCGCCGTGACTCAGTGCAGACCTGCGGG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTCCTCCTTGAACCTGTaGAGCCGGCACGTCACACAC +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHSSLNL*SRHVTH
Trigger: GTGTGTGACGTGCCGGCTGCACAGGTTCAAGGAGGA...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGTCCTCCTTGAACCTGTaGAGCCGGCACGTCACACAC +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQSSLNL*SRHVTH
Trigger: GTGTGTGACGTGCCGGCTGCACAGGTTCAAGGAGGA...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTCACAATCTCATAGGCTaGCAGCTCAACCCATCCGTC +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPHNLIG*QLNPSV
Trigger: GACGGATGGGTTGAGCTGGCAGCCTATGAGATTGTG...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTACCAGCGTGCACACCGTaGACCTCCCAGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLPACTP*TSQRRA
Trigger: AGCCCTGCGCTGGGAGGTGCACGGTGTGCACGCTGG...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382263.3
CDS-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATAGACAACTCCATGCCTaGCCCACACTGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHRQLHA*PTLVAG
Trigger: CCCTGCAACCAGTGTGGGCCAGGCATGGAGTTGTCT...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000382263.3
CDS-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGAGACAACTCCATGCCTaGCCCACACTGGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQRQLHA*PTLVAG
Trigger: CCCTGCAACCAGTGTGGGCCAGGCATGGAGTTGTCT...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000382263.3
CDS-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATAGCAGTCCCCGCAGATaGCATCACTGGTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHSSPRR*HHWWLN
Trigger: GTTCAGCCACCAGTGATGCCATCTGCGGGGACTGCT...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCCGTGTCCCGTGGGCTaGAGGCCGTGGACGCGATCT +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRPCPVG*RPWTRS
Trigger: AGATCGCGTCCACGGCCTCCAGCCCACGGGACACGG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGCAGCGCCGTGTCCCGTaGGCTGGAGGCCGTGGACGC +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLQRRVP*AGGRGR
Trigger: GCGTCCACGGCCTCCAGCCCACGGGACACGGCGCTG...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTTGTTGTCACCACCCATaGGATTCTGCATCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPCCHHP*DSASEA
Trigger: GGCCTCTGATGCAGAATCCCATGGGTGGTGACAACA...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGGGACGTCTGAGTGGCTaGGTGGATGACAGCACCACT +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQGRLSG*VDDSTT
Trigger: AGTGGTGCTGTCATCCACCCAGCCACTCAGACGTCC...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATGGGCGCGGGGTTGCATaGGGGTCCAGTCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYGRGVA*GSSPAC
Trigger: GCACGCTGGACTGGACCCCCATGCAACCCCGCGCCC...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382263.3
CDS-3UTR CCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACACGCGCGGAGCAGTCCTaGTTAAGGCGCAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTRAEQS*LRRRAR
Trigger: CCGCGCCCTGCGCCTTAACCAGGACTGCTCCGCGCG...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382263.3
CDS-3UTR TCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCTGCGTTTCTTGCCTaGAGACTGGCTGCAGAATGC +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQPAFLA*RLAAEC
Trigger: GCATTCTGCAGCCAGTCTTCAGGCAAGAAACGCAGG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATGGCACTAGGTTGACATaGCCGCTTGGGGCTACAATG +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHGTRLT*PLGATM
Trigger: CATTGTAGCCCCAAGCGGTCATGTCAACCTAGTGCC...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCATCCTCCTTGAACCTGTaGAGCCGGCACGTCACACAC +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPSSLNL*SRHVTH
Trigger: GTGTGTGACGTGCCGGCTGCACAGGTTCAAGGAGGA...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTCGCCGGGTTGGGGCTaGAGGCCTCCTCACAGCACA +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSSPGWG*RPPHST
Trigger: TGTGCTGTGAGGAGGCCTGCAGCCCCAACCCGGCGA...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTATCGCCGGGTTGGGGCTaGAGGCCTCCTCACAGCACA +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLSPGWG*RPPHST
Trigger: TGTGCTGTGAGGAGGCCTGCAGCCCCAACCCGGCGA...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTAAGCCACAGTGGTTATaGCCATTCAGCCACACGCAT +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPKPQWL*PFSHTH
Trigger: ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTT...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTCGCAGATGGCATCACTaGTGGCTGAACAATTTGCCT +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPRRWHH*WLNNLP
Trigger: AGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCG...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAGAGTCACGGCGGCACTaGCAGCAGGCTCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLESRRH*QQALWA
Trigger: TGCCCACAGAGCCTGCTGCCAGTGCCGCCGTGACTC...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTGAGTCACGGCGGCACTaGCAGCAGGCTCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSESRRH*QQALWA
Trigger: TGCCCACAGAGCCTGCTGCCAGTGCCGCCGTGACTC...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGCCTCCTCACAGCACATaGATGGGAGCAAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQPPHST*MGASAP
Trigger: CGGTGCGCTTGCTCCCATCCATGTGCTGTGAGGAGG...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTCAAGAGTCGCCGGGTTaGGGCTGCAGGCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSQESPG*GCRPPH
Trigger: GTGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTG...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCAGGACGTCTGAGTGGCTaGGTGGATGACAGCACCACT +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPGRLSG*VDDSTT
Trigger: AGTGGTGCTGTCATCCACCCAGCCACTCAGACGTCC...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATAGCCCCAGTCCTCCTTaGACCTGTGCAGCCGGCACG +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYSPSPP*TCAAGT
Trigger: CGTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGCT...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTGGCATCACTGGTGGCTaGACAATTTGCCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPGITGG*TICLLK
Trigger: TTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCC...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTACACACTCCATGTCTTaGAAGCCGACAAGTTTCGTC +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPTHSMS*KPTSFV
Trigger: GACGAAACTTGTCGGCTTTCAAGACATGGAGTGTGT...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTCCGACACAGCCCTCCTaGCATCGGCACTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSPTQPS*HRHSSS
Trigger: GCTGCTAGAGTGCCGATGTCAGGAGGGCTGTGTCGG...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACTGGCCCACACTGGTTaGAGGGAACACAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPLAHTG*REHSFQ
Trigger: CTGGAAACTGTGTTCCCTGCAACCAGTGTGGGCCAG...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000382263.3
CDS-3UTR GCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCAGCACGTCACACACTGTaGATCCTCCCCATAGCCGAA +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPARHTL*ILPIAE
Trigger: TTCGGCTATGGGGAGGATGCACAGTGTGTGACGTGC...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATAGTCCAGACAGGGCTTaGATTTCTGGAAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHSPDRA*ISGSPS
Trigger: ACTGGGGCTTCCAGAAATGCAAGCCCTGTCTGGACT...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGAGACTGGCTGCAGAATaGACCCCACAACCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQRLAAE*TPQPRV
Trigger: GACTCTTGGTTGTGGGGTGCATTCTGCAGCCAGTCT...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTACTCACAGCACATGGATaGGAGCAAGCGCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLLTAHG*EQAHRP
Trigger: GGGCCGGTGCGCTTGCTCCCATCCATGTGCTGTGAG...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACACAAGAGTCGCCGGGTTaGGGCTGCAGGCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTQESPG*GCRPPH
Trigger: GTGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTG...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGTTCTTGCCTGAAGACTaGCTGCAGAATGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQFLPED*LQNAPH
Trigger: GTGGGGTGCATTCTGCAGCCAGTCTTCAGGCAAGAA...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGAGCTTACAGCTGGTCTaGCTCAGAAGCAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQSLQLV*LRSNWL
Trigger: CAGCCAGTTGCTTCTGAGCCAGACCAGCTGTAAGCT...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATGAACAATTTGCCTTCTaGAAGCGGTTCACCACTGCG +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHEQFAF*KRFTTA
Trigger: CGCAGTGGTGAACCGCTTTCAGAAGGCAAATTGTTC...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGGAACAATTTGCCTTCTaGAAGCGGTTCACCACTGCG +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQEQFAF*KRFTTA
Trigger: CGCAGTGGTGAACCGCTTTCAGAAGGCAAATTGTTC...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCATCAGAGCCGTTGTACTaGATGTCCTGTGACCGCAGA +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPSEPLY*MSCDRR
Trigger: TCTGCGGTCACAGGACATTCAGTACAACGGCTCTGA...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGGCATATTCGTGGAGCTaGGGTCTGTCAAAACACGAC +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQAYSWS*GLSKHD
Trigger: GTCGTGTTTTGACAGACCTCAGCTCCACGAATATGC...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGCAGAGGCCAGGCATCTaGAAACTCGCCACAGATGGA +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQQRPGI*KLATDG
Trigger: TCCATCTGTGGCGAGTTTTCAGATGCCTGGCCTCTG...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGACAGCACCACTCTCCTaGTCTAGCTGGCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQTAPLS*SSWLLI
Trigger: TATGAGAAGCCAGCTAGATCAGGAGAGTGGTGCTGT...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGTCAGAAGCAACTGGCTaGAAGGCTTCAAATGCCGTC +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQSEATG*KASNAV
Trigger: GACGGCATTTGAAGCCTTTCAGCCAGTTGCTTCTGA...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATCCGACACAGCCCTCCTaGCATCGGCACTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYPTQPS*HRHSSS
Trigger: GCTGCTAGAGTGCCGATGTCAGGAGGGCTGTGTCGG...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGAAAGCGGTTCACCACTaGGCAGTCCAGACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQKAVHH*AVQTGL
Trigger: AAGCCCTGTCTGGACTGCGCAGTGGTGAACCGCTTT...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGTCGCCGGGTTGGGGCTaGAGGCCTCCTCACAGCACA +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLSPGWG*RPPHST
Trigger: TGTGCTGTGAGGAGGCCTGCAGCCCCAACCCGGCGA...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTACTCCCCGGCTGGGCCTaGGTTTCTTGCCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLLPGWA*VSCLKT
Trigger: AGTCTTCAGGCAAGAAACGCAGGCCCAGCCGGGGAG...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTCTCCCCGGCTGGGCCTaGGTTTCTTGCCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSLPGWA*VSCLKT
Trigger: AGTCTTCAGGCAAGAAACGCAGGCCCAGCCGGGGAG...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTAGCACACGCTTCTACTaGAGAAAGAAGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPSTRFY*RKKQVL
Trigger: AAGAACCTGCTTCTTTCTGCAGTAGAAGCGTGTGCT...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCGCAGATGGCATCACTaGTGGCTGAACAATTTGCCT +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQRRWHH*WLNNLP
Trigger: AGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCAAGCTTACAGCTGGTCTaGCTCAGAAGCAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPSLQLV*LRSNWL
Trigger: CAGCCAGTTGCTTCTGAGCCAGACCAGCTGTAAGCT...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATGTTAATTCTGGGCAATaGGCTGCCCTTTCTCGACCA +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHVNSGQ*AALSRP
Trigger: TGGTCGAGAAAGGGCAGCCCATTGCCCAGAATTAAC...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTGTTGACATGACCGCTTaGGGCTACAATGAAACATTC +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPVDMTA*GYNETF
Trigger: GAATGTTTCATTGTAGCCCCAAGCGGTCATGTCAAC...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATCACAAGAAGCCACAGTaGTTATGCCCATTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHHKKPQ*LCPFSH
Trigger: GTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCTCCCATGCTTGGGCTaGGTGGCTGGATCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRLPCLG*VAGSVA
Trigger: AGCTACAGATCCAGCCACTCAGCCCAAGCATGGGAG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTCATCAAAGGCAGGGCTaGGTTTATATATATGCATGG +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPHQRQG*VYIYAW
Trigger: CCATGCATATATATAAACTCAGCCCTGCCTTTGATG...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTACGATCTTCACGAGGTTaGCCTTGCTGGCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLRSSRG*PCWHSA
Trigger: CGCACTGTGCCAGCAAGGTCAACCTCGTGAAGATCG...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCGATCTTCACGAGGTTaGCCTTGCTGGCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRRSSRG*PCWHSA
Trigger: CGCACTGTGCCAGCAAGGTCAACCTCGTGAAGATCG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTGTACTGAATGTCCTGTaGCCGCAGAGACCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSVLNVL*PQRPAG
Trigger: CCCAGCTGGTCTCTGCGGTCACAGGACATTCAGTAC...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAGTACTGAATGTCCTGTaGCCGCAGAGACCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLVLNVL*PQRPAG
Trigger: CCCAGCTGGTCTCTGCGGTCACAGGACATTCAGTAC...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTATAGTTAGTGCATCCTaGGTTGATGCTGATTCTACC +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPIVSAS*VDADST
Trigger: GGTAGAATCAGCATCAACTCAGGATGCACTAACTAT...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATAGATGCAGAGTATCATaGGTCGGCCTGGAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHRCRVS*VGLESF
Trigger: AAAAGACTCCAGGCCGACTCATGATACTCTGCATCT...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGGTATGTGAATCATGGTaGGGTCACGCGAGGAAACTA +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQVCESW*GHARKL
Trigger: TAGTTTCCTCGCGTGACCTCACCATGATTCACATAC...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGACAGTGGCACGTATGTaGATCATGGTGAGGTCACGC +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQTVARM*IMVRSR
Trigger: GCGTGACCTCACCATGATTCACATACGTGCCACTGT...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTTTACTTGGTTGCTCTTaGAATCCTCCTCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPLLGCS*NPPQSC
Trigger: ACAAGACTGAGGAGGATTTCAAGAGCAACCAAGTAA...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTAGGCAGAGGGACAGATaGAACAAATGTTTCTATAGC +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPRQRDR*NKCFYS
Trigger: GCTATAGAAACATTTGTTGCATCTGTCCCTCTGCCT...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTTGTCAACGAGCTTCTaGAGCACAAGAAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHLSTSF*STRSHS
Trigger: ACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAA...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCTTCCTATAAAATCCTaGCAAGCAGTCCCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQLPIKS*QAVPAD
Trigger: ATCTGCGGGGACTGCTTGCCAGGATTTTATAGGAAG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTCCGTGTCCCGTGGGCTaGAGGCCGTGGACGCGATCT +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCPCPVG*RPWTRS
Trigger: AGATCGCGTCCACGGCCTCCAGCCCACGGGACACGG...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACACCTCCTCACAGCACATaGATGGGAGCAAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTPPHST*MGASAP
Trigger: CGGTGCGCTTGCTCCCATCCATGTGCTGTGAGGAGG...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATGTTTCAGCTTACAGCTaGTCTGGCTCAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHVSAYS*SGSEAT
Trigger: AGTTGCTTCTGAGCCAGACCAGCTGTAAGCTGAAAC...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTCTAGTCCTAACATGTaGTGTGTTCTCACGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHSSPNM*CVLTEG
Trigger: GCCTTCCGTGAGAACACACCACATGTTAGGACTAGA...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTCACAGATGGACTGCGTaGGGGATCCGAAGAAAGTCG +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSHRWTA*GIRRKS
Trigger: CGACTTTCTTCGGATCCCTCACGCAGTCCATCTGTG...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATGAATGTCTTCTCCAGTaGGTTCAGGATAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHECLLQ*VQDKSH
Trigger: GTGACTCTTATCCTGAACTCACTGGAGAAGACATTC...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTCAGAAGCAACTGGCTaGAAGGCTTCAAATGCCGTC +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQSEATG*KASNAV
Trigger: GACGGCATTTGAAGCCTTTCAGCCAGTTGCTTCTGA...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATAAAGTTAAAAGACAGTaGCTTGGGCAGGGCAATTCC +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHKVKRQ*LGQGNS
Trigger: GGAATTGCCCTGCCCAAGTCACTGTCTTTTAACTTT...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCAGTATGTGAATCATGGTaGGGTCACGCGAGGAAACTA +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPVCESW*GHARKL
Trigger: TAGTTTCCTCGCGTGACCTCACCATGATTCACATAC...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATCGATCCCTGAATTCTTaGTGTCTACAGTCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHRSLNS*CLQSPD
Trigger: ATCAGGAGACTGTAGACAGCAAGAATTCAGGGATCG...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000382263.3
CDS-3UTR GCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTGCACGTCACACACTGTaGATCCTCCCCATAGCCGAA +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSARHTL*ILPIAE
Trigger: TTCGGCTATGGGGAGGATGCACAGTGTGTGACGTGC...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGAAAGCGGTTCACCACTaGGCAGTCCAGACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRKAVHH*AVQTGL
Trigger: AAGCCCTGTCTGGACTGCGCAGTGGTGAACCGCTTT...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAACCGGCCCGCAGGTCTaGACTGAGTCACGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKTGPQV*TESRRH
Trigger: GTGCCGCCGTGACTCAGTGCAGACCTGCGGGCCGGT...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTATGCCTGAAGACTGGCTaGAGAATGCACCCCACAACC +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLCLKTG*RMHPTT
Trigger: GGTTGTGGGGTGCATTCTGCAGCCAGTCTTCAGGCA...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCCACCCATGGGATTCTaGATCAGAGGCCAGGCATCT +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRPPMGF*IRGQAS
Trigger: AGATGCCTGGCCTCTGATGCAGAATCCCATGGGTGG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTCCACCCATGGGATTCTaGATCAGAGGCCAGGCATCT +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSPPMGF*IRGQAS
Trigger: AGATGCCTGGCCTCTGATGCAGAATCCCATGGGTGG...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGAGATGGCATCACTGGTaGCTGAACAATTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQRWHHW*LNNLPS
Trigger: AGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCT...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATAGCAGTCCCCGCAGATaGCATCACTGGTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYSSPRR*HHWWLN
Trigger: GTTCAGCCACCAGTGATGCCATCTGCGGGGACTGCT...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACTTCCTATAAAATCCTaGCAAGCAGTCCCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPLPIKS*QAVPAD
Trigger: ATCTGCGGGGACTGCTTGCCAGGATTTTATAGGAAG...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTGAGTCACGGCGGCACTaGCAGCAGGCTCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCESRRH*QQALWA
Trigger: TGCCCACAGAGCCTGCTGCCAGTGCCGCCGTGACTC...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGAGAATGAGACTGGACTaGAACAGCCCCACCAACCAA +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQRMRLD*NSPTNQ
Trigger: TTGGTTGGTGGGGCTGTTCCAGTCCAGTCTCATTCT...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTCTAATCTTACACAATTaGAAGGAGCACGACAATGTC +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPLILHN*KEHDNV
Trigger: GACATTGTCGTGCTCCTTCCAATTGTGTAAGATTAG...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATGAAATGCCTGTAATCTaGTCAGTGAATCAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHEMPVI*SVNQLL
Trigger: CAGCAACTGATTCACTGATCAGATTACAGGCATTTC...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR TCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGGGCATCACTGGTGGCTaGACAATTTGCCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQGITGG*TICLLK
Trigger: TTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCC...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGTCAGAGCCGTTGTACTaGATGTCCTGTGACCGCAGA +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRSEPLY*MSCDRR
Trigger: TCTGCGGTCACAGGACATTCAGTACAACGGCTCTGA...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACACACAGATGGACTGCGTaGGGGATCCGAAGAAAGTCG +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTHRWTA*GIRRKS
Trigger: CGACTTTCTTCGGATCCCTCACGCAGTCCATCTGTG...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGACAGTGGCACGTATGTaGATCATGGTGAGGTCACGC +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRTVARM*IMVRSR
Trigger: GCGTGACCTCACCATGATTCACATACGTGCCACTGT...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAACAGTGGCACGTATGTaGATCATGGTGAGGTCACGC +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLTVARM*IMVRSR
Trigger: GCGTGACCTCACCATGATTCACATACGTGCCACTGT...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATGCACGTCACACACTGTaGATCCTCCCCATAGCCGAA +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYARHTL*ILPIAE
Trigger: TTCGGCTATGGGGAGGATGCACAGTGTGTGACGTGC...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTAGTCCAGACAGGGCTTaGATTTCTGGAAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSSPDRA*ISGSPS
Trigger: ACTGGGGCTTCCAGAAATGCAAGCCCTGTCTGGACT...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACATGCCTGAAGACTGGCTaGAGAATGCACCCCACAACC +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTCLKTG*RMHPTT
Trigger: GGTTGTGGGGTGCATTCTGCAGCCAGTCTTCAGGCA...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTCGCCACAGATGGACTaGGTGAGGGATCCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSSPQMD*VRDPKK
Trigger: TTTCTTCGGATCCCTCACGCAGTCCATCTGTGGCGA...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATCTGAAAGGCTTCAAATaGCGTCAGTTTGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHLKGFK*RQFGSD
Trigger: ATCTGAACCAAACTGACGGCATTTGAAGCCTTTCAG...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTCACAATCTCATAGGCTaGCAGCTCAACCCATCCGTC +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSHNLIG*QLNPSV
Trigger: GACGGATGGGTTGAGCTGGCAGCCTATGAGATTGTG...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTGCTGAGTTTATTGAGTaGTATGGGATATTCCAACAA +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPAEFIE*YGIFQQ
Trigger: TTGTTGGAATATCCCATAGCACTCAATAAACTCAGC...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGGGTCCAGTCCAGCGTaGACACCGTGCACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMGSSPA*TPCTSQ
Trigger: CTGGGAGGTGCACGGTGTGCACGCTGGACTGGACCC...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382263.3
CDS-3UTR CCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACACAGGGCTTGCATTTCTaGAAGCCCCAGTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTQGLHF*KPQSSL
Trigger: CAAGGAGGACTGGGGCTTCCAGAAATGCAAGCCCTG...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATCAGGGCTTGCATTTCTaGAAGCCCCAGTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYQGLHF*KPQSSL
Trigger: CAAGGAGGACTGGGGCTTCCAGAAATGCAAGCCCTG...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGTTCTTGCCTGAAGACTaGCTGCAGAATGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRFLPED*LQNAPH
Trigger: GTGGGGTGCATTCTGCAGCCAGTCTTCAGGCAAGAA...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTCACCATCTCCCCGGCTaGGCCTGCGTTTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCHHLPG*ACVSCL
Trigger: CAGGCAAGAAACGCAGGCCCAGCCGGGGAGATGGTG...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTATGTTGTCACCACCCATaGGATTCTGCATCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLCCHHP*DSASEA
Trigger: GGCCTCTGATGCAGAATCCCATGGGTGGTGACAACA...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACAGAAGTGTGGATTCTaGAAAGAGCTATCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPQKCGF*KELSSS
Trigger: AGAGGAGGATAGCTCTTTCCAGAATCCACACTTCTG...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACTGAGGTCAGAAGTGTaGATTCTGGAAAGAGCTATC +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPLRSEV*ILERAI
Trigger: GATAGCTCTTTCCAGAATCCACACTTCTGACCTCAG...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 72 bp GCTGCCAGCTCAACCCATCCGTCTTTGAAGTCACTTTaGTGGCAGAGAAGCTTCTCATGTAGGAAAGATGCA +
Preference number: 4 (lower is better)
Translates to: AASSTHPSLKSL*WQRSFSCRKDA
Trigger: TGCATCTTTCCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGAGCTGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGGAACAATTTGCCTTCTaGAAGCGGTTCACCACTGCG +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCREQFAF*KRFTTA
Trigger: CGCAGTGGTGAACCGCTTTCAGAAGGCAAATTGTTC...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCATCTGGATTGAGAGAATaGATGTCTTCTCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPSGLRE*MSSPVS
Trigger: ACTCACTGGAGAAGACATTCATTCTCTCAATCCAGA...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCACCAACCAAATCTTaGCTGCTATTTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQPPTKS*LLFESK
Trigger: TTTGGATTCAAATAGCAGTCAAGATTTGGTTGGTGG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGGTAAAGTTTTCAGAATaGGACTGGACTGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQVKFSE*DWTGTA
Trigger: GGCTGTTCCAGTCCAGTCTCATTCTGAAAACTTTAC...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGAGGGAATTGAGGTCATaGGATGTACCAGACACAGGC +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRRELRS*DVPDTG
Trigger: GCCTGTGTCTGGTACATCTCATGACCTCAATTCCCT...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGGGCACTAGGTTGACATaGCCGCTTGGGGCTACAATG +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLGTRLT*PLGATM
Trigger: CATTGTAGCCCCAAGCGGTCATGTCAACCTAGTGCC...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAAGTCCAGACAGGGCTTaGATTTCTGGAAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTSPDRA*ISGSPS
Trigger: ACTGGGGCTTCCAGAAATGCAAGCCCTGTCTGGACT...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAAGACTGGCTGCAGAATaGACCCCACAACCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTRLAAE*TPQPRV
Trigger: GACTCTTGGTTGTGGGGTGCATTCTGCAGCCAGTCT...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGAAAGGAACACAGCCCTaGCTACTTTCATCATCTCTC +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQKGTQP*LLSSSL
Trigger: GAGAGATGATGAAAGTAGGCAGGGCTGTGTTCCTTT...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGCAACTTAGTTTCTCCTaGCAGCACTTCTGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQQLSFS*QHFCAK
Trigger: TTTGGCACAGAAGTGCTGCCAGGAGAAACTAAGTTG...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR CCA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTAAATGTATTTATTGTTaGAGAGTTCCGTTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SHSGYAHSATRITRHSPPKCIYC*RVPFSN
Trigger: GTTGCTGAACGGAACTCTCCAACAATAAATACATTT...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248484.9
CDS-3UTR CCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGTGGGCTGGAGGCCGTaGACGCGATCTTCACGAGGT +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMVGWRP*TRSSRG
Trigger: ACCTCGTGAAGATCGCGTCCACGGCCTCCAGCCCAC...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAACTCACAGCACATGGATaGGAGCAAGCGCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKLTAHG*EQAHRP
Trigger: GGGCCGGTGCGCTTGCTCCCATCCATGTGCTGTGAG...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATTGTTGTCACCACCCATaGGATTCTGCATCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYCCHHP*DSASEA
Trigger: GGCCTCTGATGCAGAATCCCATGGGTGGTGACAACA...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTATCATGAGTCGGCCTaGAGTCTTTTCTTGTTATTC +
Preference number: 4 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHYHESA*SLFLLF
Trigger: GAATAACAAGAAAAGACTCCAGGCCGACTCATGATA...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGCAGAAGTGTGGATTCTaGAAAGAGCTATCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQQKCGF*KELSSS
Trigger: AGAGGAGGATAGCTCTTTCCAGAATCCACACTTCTG...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTCTCCCATGCTTGGGCTaGGTGGCTGGATCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCLPCLG*VAGSVA
Trigger: AGCTACAGATCCAGCCACTCAGCCCAAGCATGGGAG...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGAGACGAGCAGGGAGATaGAATGCCTGTAATCTGATC +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRRRAGR*NACNLI
Trigger: GATCAGATTACAGGCATTTCATCTCCCTGCTCGTCT...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAAGACGAGCAGGGAGATaGAATGCCTGTAATCTGATC +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLRRAGR*NACNLI
Trigger: GATCAGATTACAGGCATTTCATCTCCCTGCTCGTCT...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAGGCATCACTGGTGGCTaGACAATTTGCCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLGITGG*TICLLK
Trigger: TTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCC...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATTCAGAAGCAACTGGCTaGAAGGCTTCAAATGCCGTC +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYSEATG*KASNAV
Trigger: GACGGCATTTGAAGCCTTTCAGCCAGTTGCTTCTGA...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAAGATGCAGAGTATCATaGGTCGGCCTGGAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLRCRVS*VGLESF
Trigger: AAAAGACTCCAGGCCGACTCATGATACTCTGCATCT...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGAGATGCAGAGTATCATaGGTCGGCCTGGAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRRCRVS*VGLESF
Trigger: AAAAGACTCCAGGCCGACTCATGATACTCTGCATCT...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTCCCTGCTTTGTGACTaGACGGGGTTAATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSSLLCD*TGLISV
Trigger: GACAGAAATTAACCCCGTTCAGTCACAAAGCAGGGA...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGTCCCTGCTTTGTGACTaGACGGGGTTAATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRSLLCD*TGLISV
Trigger: GACAGAAATTAACCCCGTTCAGTCACAAAGCAGGGA...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTACCATTCCCTGCTTTGTaGCTGAACGGGGTTAATTTC +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLPFPAL*LNGVNF
Trigger: GAAATTAACCCCGTTCAGTCACAAAGCAGGGAATGG...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGAGACTGGCTGCAGAATaGACCCCACAACCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLRLAAE*TPQPRV
Trigger: GACTCTTGGTTGTGGGGTGCATTCTGCAGCCAGTCT...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAATGCAAGGTCCAGACTaGTCAGTCCATAAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLMQGPD*SVHKPN
Trigger: GTTAGGCTTATGGACTGAGCAGTCTGGACCTTGCAT...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAAAGCCACAGTGGTTATaGCCATTCAGCCACACGCAT +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTKPQWL*PFSHTH
Trigger: ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTT...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTTGTCAACGAGCTTCTaGAGCACAAGAAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSLSTSF*STRSHS
Trigger: ACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAA...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGCCTCCTCACAGCACATaGATGGGAGCAAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMPPHST*MGASAP
Trigger: CGGTGCGCTTGCTCCCATCCATGTGCTGTGAGGAGG...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTGGACGTCTGAGTGGCTaGGTGGATGACAGCACCACT +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCGRLSG*VDDSTT
Trigger: AGTGGTGCTGTCATCCACCCAGCCACTCAGACGTCC...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTATGGCTCAGAAGCAACTaGCTGAAAGGCTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLWLRSN*LKGFKC
Trigger: GCATTTGAAGCCTTTCAGCCAGTTGCTTCTGAGCCA...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGAGCTTACAGCTGGTCTaGCTCAGAAGCAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLSLQLV*LRSNWL
Trigger: CAGCCAGTTGCTTCTGAGCCAGACCAGCTGTAAGCT...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAGTTTCAGCTTACAGCTaGTCTGGCTCAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLVSAYS*SGSEAT
Trigger: AGTTGCTTCTGAGCCAGACCAGCTGTAAGCTGAAAC...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGGTTTCAGCTTACAGCTaGTCTGGCTCAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRVSAYS*SGSEAT
Trigger: AGTTGCTTCTGAGCCAGACCAGCTGTAAGCTGAAAC...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATGTTAATTCTGGGCAATaGGCTGCCCTTTCTCGACCA +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYVNSGQ*AALSRP
Trigger: TGGTCGAGAAAGGGCAGCCCATTGCCCAGAATTAAC...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACTAATCTTACACAATTaGAAGGAGCACGACAATGTC +
Preference number: 4 (lower is better)
Translates to: CQRASAAQEATVVMPIQPLILHN*KEHDNV
Trigger: GACATTGTCGTGCTCCTTCCAATTGTGTAAGATTAG...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCAAAACCTAAAACTATaGAGAAACGGCCACAAGAAA +
Preference number: 4 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQQNLKL*RNGHKK
Trigger: TTTCTTGTGGCCGTTTCTCCATAGTTTTAGGTTTTG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGCCAGATTTCAAACAGTaGCACGTATGTGAATCATGG +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQPDFKQ*HVCESW
Trigger: CCATGATTCACATACGTGCCACTGTTTGAAATCTGG...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTATCATTCCCATCAGTCTaGCTTTCTCCAGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLSFPSV*LSPASV
Trigger: AACACTGGCTGGAGAAAGCCAGACTGATGGGAATGA...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 72 bp ACTGCTCAGTCCATAAGCCTAACAAAGGAGTACTCTTaGGGTTCCAGCACACGCTTCTACTGCAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: TAQSISLTKEYS*GSSTRFYCRKK
Trigger: CTTCTTTCTGCAGTAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 72 bp GACTTTACTTGGTTGCTCTTGAAATCCTCCTCAGTCTaGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: DFTWLLLKSSSV*STSFCSTRSHS
Trigger: ACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAGAGCAACCAAGTAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAACACACTCCATGTCTTaGAAGCCGACAAGTTTCGTC +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTTHSMS*KPTSFV
Trigger: GACGAAACTTGTCGGCTTTCAAGACATGGAGTGTGT...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAACGATCTTCACGAGGTTaGCCTTGCTGGCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKRSSRG*PCWHSA
Trigger: CGCACTGTGCCAGCAAGGTCAACCTCGTGAAGATCG...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTCCTGCGTTTCTTGCCTaGAGACTGGCTGCAGAATGC +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCPAFLA*RLAAEC
Trigger: GCATTCTGCAGCCAGTCTTCAGGCAAGAAACGCAGG...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGGAATGTCTTCTCCAGTaGGTTCAGGATAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRECLLQ*VQDKSH
Trigger: GTGACTCTTATCCTGAACTCACTGGAGAAGACATTC...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGACAGCACCACTCTCCTaGTCTAGCTGGCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLTAPLS*SSWLLI
Trigger: TATGAGAAGCCAGCTAGATCAGGAGAGTGGTGCTGT...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATCCATTCCCTGCTTTGTaGCTGAACGGGGTTAATTTC +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYPFPAL*LNGVNF
Trigger: GAAATTAACCCCGTTCAGTCACAAAGCAGGGAATGG...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGAAAGTTAAAAGACAGTaGCTTGGGCAGGGCAATTCC +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRKVKRQ*LGQGNS
Trigger: GGAATTGCCCTGCCCAAGTCACTGTCTTTTAACTTT...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGCTGGCAGCACTTCTGTaGCAAATGCTTCTACCTTCC +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLLAALL*QMLLPS
Trigger: GGAAGGTAGAAGCATTTGGCACAGAAGTGCTGCCAG...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR GCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTAAAGGAACACAGCCCTaGCTACTTTCATCATCTCTC +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSKGTQP*LLSSSL
Trigger: GAGAGATGATGAAAGTAGGCAGGGCTGTGTTCCTTT...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTCAACTTAGTTTCTCCTaGCAGCACTTCTGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSQLSFS*QHFCAK
Trigger: TTTGGCACAGAAGTGCTGCCAGGAGAAACTAAGTTG...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGAGATGGCATCACTGGTaGCTGAACAATTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRRWHHW*LNNLPS
Trigger: AGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCT...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGGTTAATTCTGGGCAATaGGCTGCCCTTTCTCGACCA +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLVNSGQ*AALSRP
Trigger: TGGTCGAGAAAGGGCAGCCCATTGCCCAGAATTAAC...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACATCTAGTCCTAACATGTaGTGTGTTCTCACGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTSSPNM*CVLTEG
Trigger: GCCTTCCGTGAGAACACACCACATGTTAGGACTAGA...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGGTAGATGGTAGGGGATaGAGCACTTTAATAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQVDGRG*STLIER
Trigger: TCTTTCTATTAAAGTGCTCCATCCCCTACCATCTAC...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACATCATTCCCATCAGTCTaGCTTTCTCCAGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTSFPSV*LSPASV
Trigger: AACACTGGCTGGAGAAAGCCAGACTGATGGGAATGA...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGTTGTGGACTGTGTGTTaGAAGCTTTTCCTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRLWTVC*KLFLVP
Trigger: TGGCACTAGGAAAAGCTTCCAACACACAGTCCACAA...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403372.6
3UTR CAA 72 bp ATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATaGAGGTTTCAGCTTACAGCTGGTCTGGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: IMSRPGVFSCYS*RFQLTAGLAQK
Trigger: CTTCTGAGCCAGACCAGCTGTAAGCTGAAACCTCAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 72 bp CTCATTCCCATCAGTCTGGCTTTCTCCAGCCAGTGTTaGTCCTTGAAGTTAATCAGGGCTCTACATATGGAA +
Preference number: 4 (lower is better)
Translates to: LIPISLAFSSQC*SLKLIRALHME
Trigger: TTCCATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGACTGATGGGAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCATCAAAGGCAGGGCTaGGTTTATATATATGCATGG +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRHQRQG*VYIYAW
Trigger: CCATGCATATATATAAACTCAGCCCTGCCTTTGATG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR TCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGACACACTCCATGTCTTaGAAGCCGACAAGTTTCGTC +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLTHSMS*KPTSFV
Trigger: GACGAAACTTGTCGGCTTTCAAGACATGGAGTGTGT...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAACAGAGGCCAGGCATCTaGAAACTCGCCACAGATGGA +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKQRPGI*KLATDG
Trigger: TCCATCTGTGGCGAGTTTTCAGATGCCTGGCCTCTG...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTATCTGGATTGAGAGAATaGATGTCTTCTCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLSGLRE*MSSPVS
Trigger: ACTCACTGGAGAAGACATTCATTCTCTCAATCCAGA...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTTTCAAGTTCTGGATTaGGAGAATGAATGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQFQVLD*ENECLL
Trigger: GAGAAGACATTCATTCTCTCAATCCAGAACTTGAAA...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAATAGTTAGTGCATCCTaGGTTGATGCTGATTCTACC +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLIVSAS*VDADST
Trigger: GGTAGAATCAGCATCAACTCAGGATGCACTAACTAT...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAGGCACTAGGTTGACATaGCCGCTTGGGGCTACAATG +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKGTRLT*PLGATM
Trigger: CATTGTAGCCCCAAGCGGTCATGTCAACCTAGTGCC...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAACCACCCATGGGATTCTaGATCAGAGGCCAGGCATCT +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKPPMGF*IRGQAS
Trigger: AGATGCCTGGCCTCTGATGCAGAATCCCATGGGTGG...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAAGCACACGCTTCTACTaGAGAAAGAAGCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTSTRFY*RKKQVL
Trigger: AAGAACCTGCTTCTTTCTGCAGTAGAAGCGTGTGCT...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGATGCAAGGTCCAGACTaGTCAGTCCATAAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLMQGPD*SVHKPN
Trigger: GTTAGGCTTATGGACTGAGCAGTCTGGACCTTGCAT...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAGTTCAGATTTATTTTTaGCCCAGAAGCCATGCAAGG +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLVQIYF*PRSHAR
Trigger: CCTTGCATGGCTTCTGGGGCAAAAATAAATCTGAAC...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATAAAGGAACACAGCCCTaGCTACTTTCATCATCTCTC +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYKGTQP*LLSSSL
Trigger: GAGAGATGATGAAAGTAGGCAGGGCTGTGTTCCTTT...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGTCCCAAGCTGTGTTGTaGACTGTGTGTTGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLSQAVL*TVCWKL
Trigger: AAGCTTCCAACACACAGTCCACAACACAGCTTGGGA...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR CCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGCAGGGCTTGCATTTCTaGAAGCCCCAGTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMQGLHF*KPQSSL
Trigger: CAAGGAGGACTGGGGCTTCCAGAAATGCAAGCCCTG...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATAGATGGCATCACTGGTaGCTGAACAATTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYRWHHW*LNNLPS
Trigger: AGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCT...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTTTCTTGCCTGAAGACTaGCTGCAGAATGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCFLPED*LQNAPH
Trigger: GTGGGGTGCATTCTGCAGCCAGTCTTCAGGCAAGAA...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGCAAATGCCGTCAGTTTaGTTCAGATTTATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LEILLSLVNELLQHKKPQQMPSV*FRFIFA
Trigger: GGCAAAAATAAATCTGAACCAAACTGACGGCATTTG...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGTCTAGTCCTAACATGTaGTGTGTTCTCACGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLSSPNM*CVLTEG
Trigger: GCCTTCCGTGAGAACACACCACATGTTAGGACTAGA...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATGTTGACATGACCGCTTaGGGCTACAATGAAACATTC +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYVDMTA*GYNETF
Trigger: GAATGTTTCATTGTAGCCCCAAGCGGTCATGTCAAC...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCCAGATTTCAAACAGTaGCACGTATGTGAATCATGG +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRPDFKQ*HVCESW
Trigger: CCATGATTCACATACGTGCCACTGTTTGAAATCTGG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 72 bp GATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTaGTTATTCATTGAGGTTTCAGCTTACAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DAEYHESAWSLF*LFIEVSAYSWS
Trigger: AGACCAGCTGTAAGCTGAAACCTCAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTCCACCAACCAAATCTTaGCTGCTATTTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSPPTKS*LLFESK
Trigger: TTTGGATTCAAATAGCAGTCAAGATTTGGTTGGTGG...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATATAGTTAGTGCATCCTaGGTTGATGCTGATTCTACC +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYIVSAS*VDADST
Trigger: GGTAGAATCAGCATCAACTCAGGATGCACTAACTAT...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCACTTCTGTGCCAAATaGTTCTACCTTCCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRHFCAK*FYLPKN
Trigger: ATTTTTGGGAAGGTAGAAGCATTTGGCACAGAAGTG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR GCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGTCGCCACAGATGGACTaGGTGAGGGATCCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMSPQMD*VRDPKK
Trigger: TTTCTTCGGATCCCTCACGCAGTCCATCTGTGGCGA...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAACACAATCTCATAGGCTaGCAGCTCAACCCATCCGTC +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKHNLIG*QLNPSV
Trigger: GACGGATGGGTTGAGCTGGCAGCCTATGAGATTGTG...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATAGGCAGAGGGACAGATaGAACAAATGTTTCTATAGC +
Preference number: 4 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYRQRDR*NKCFYS
Trigger: GCTATAGAAACATTTGTTGCATCTGTCCCTCTGCCT...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTAGTGCCAGCGGGTTCTaGTTTATCCCTTTCATCTCG +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCSASGF*FIPFIS
Trigger: CGAGATGAAAGGGATAAAGCAGAACCCGCTGGCACT...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403372.6
CDS-3UTR CCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGATGCCTGGCCCACACTaGTTGCAGGGAACACAGTTT +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMMPGPH*LQGTQF
Trigger: AAACTGTGTTCCCTGCAACCAGTGTGGGCCAGGCAT...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000382263.3
CDS-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTAGAATGAGACTGGACTaGAACAGCCCCACCAACCAA +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCRMRLD*NSPTNQ
Trigger: TTGGTTGGTGGGGCTGTTCCAGTCCAGTCTCATTCT...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGTATCATGAGTCGGCCTaGAGTCTTTTCTTGTTATTC +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRYHESA*SLFLLF
Trigger: GAATAACAAGAAAAGACTCCAGGCCGACTCATGATA...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTATTGAAGTCACTTTTGTaGCAGAGAAGCTTCTCATGT +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLLKSLL*QRSFSC
Trigger: ACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAA...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTTGAAGTCACTTTTGTaGCAGAGAAGCTTCTCATGT +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSLKSLL*QRSFSC
Trigger: ACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAA...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTACTAATCTTACACAATTaGAAGGAGCACGACAATGTC +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLLILHN*KEHDNV
Trigger: GACATTGTCGTGCTCCTTCCAATTGTGTAAGATTAG...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTGTAGATGGTAGGGGATaGAGCACTTTAATAGAAAGA +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSVDGRG*STLIER
Trigger: TCTTTCTATTAAAGTGCTCCATCCCCTACCATCTAC...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGACAGCACCACTCTCCTaGTCTAGCTGGCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMTAPLS*SSWLLI
Trigger: TATGAGAAGCCAGCTAGATCAGGAGAGTGGTGCTGT...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGAGGGAATTGAGGTCATaGGATGTACCAGACACAGGC +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMRELRS*DVPDTG
Trigger: GCCTGTGTCTGGTACATCTCATGACCTCAATTCCCT...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACACACTTCTGTGCCAAATaGTTCTACCTTCCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTHFCAK*FYLPKN
Trigger: ATTTTTGGGAAGGTAGAAGCATTTGGCACAGAAGTG...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR GCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGCTGGCAGCACTTCTGTaGCAAATGCTTCTACCTTCC +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMLAALL*QMLLPS
Trigger: GGAAGGTAGAAGCATTTGGCACAGAAGTGCTGCCAG...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR GCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGCTGAAAGGCTTCAAATaGCGTCAGTTTGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLLKGFK*RQFGSD
Trigger: ATCTGAACCAAACTGACGGCATTTGAAGCCTTTCAG...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGAGGCAGAGGGACAGATaGAACAAATGTTTCTATAGC +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLRQRDR*NKCFYS
Trigger: GCTATAGAAACATTTGTTGCATCTGTCCCTCTGCCT...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTGCTGAGTTTATTGAGTaGTATGGGATATTCCAACAA +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSAEFIE*YGIFQQ
Trigger: TTGTTGGAATATCCCATAGCACTCAATAAACTCAGC...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAGCTGAGTTTATTGAGTaGTATGGGATATTCCAACAA +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLAEFIE*YGIFQQ
Trigger: TTGTTGGAATATCCCATAGCACTCAATAAACTCAGC...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTCTTCCTATAAAATCCTaGCAAGCAGTCCCCGCAGAT +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCLPIKS*QAVPAD
Trigger: ATCTGCGGGGACTGCTTGCCAGGATTTTATAGGAAG...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCAAATGCCGTCAGTTTaGTTCAGATTTATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRQMPSV*FRFIFA
Trigger: GGCAAAAATAAATCTGAACCAAACTGACGGCATTTG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCAAAACCTAAAACTATaGAGAAACGGCCACAAGAAA +
Preference number: 4 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRQNLKL*RNGHKK
Trigger: TTTCTTGTGGCCGTTTCTCCATAGTTTTAGGTTTTG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTTCATTCCCATCAGTCTaGCTTTCTCCAGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCSFPSV*LSPASV
Trigger: AACACTGGCTGGAGAAAGCCAGACTGATGGGAATGA...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGCACAAGAAGCCACAGTaGTTATGCCCATTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMHKKPQ*LCPFSH
Trigger: GTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTATTCATGACTTTACTTaGTTGCTCTTGAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSIHDFT*LLLKSS
Trigger: GGAGGATTTCAAGAGCAACCAAGTAAAGTCATGAAT...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAATTCATGACTTTACTTaGTTGCTCTTGAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLIHDFT*LLLKSS
Trigger: GGAGGATTTCAAGAGCAACCAAGTAAAGTCATGAAT...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTGTAAAGTTTTCAGAATaGGACTGGACTGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCVKFSE*DWTGTA
Trigger: GGCTGTTCCAGTCCAGTCTCATTCTGAAAACTTTAC...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAGTATGTGAATCATGGTaGGGTCACGCGAGGAAACTA +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKVCESW*GHARKL
Trigger: TAGTTTCCTCGCGTGACCTCACCATGATTCACATAC...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATTGTCAACGAGCTTCTaGAGCACAAGAAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKLSTSF*STRSHS
Trigger: ACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGCAAAGGAGTACTCTTTaGGTTCCAGCACACGCTTCT +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMQRSTL*VPAHAS
Trigger: AGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTG...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAACAAAGGAGTACTCTTTaGGTTCCAGCACACGCTTCT +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKQRSTL*VPAHAS
Trigger: AGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTG...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGGTAGATGGTAGGGGATaGAGCACTTTAATAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLVDGRG*STLIER
Trigger: TCTTTCTATTAAAGTGCTCCATCCCCTACCATCTAC...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACACAAAACCTAAAACTATaGAGAAACGGCCACAAGAAA +
Preference number: 4 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTQNLKL*RNGHKK
Trigger: TTTCTTGTGGCCGTTTCTCCATAGTTTTAGGTTTTG...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAGAATGTCTTCTCCAGTaGGTTCAGGATAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKECLLQ*VQDKSH
Trigger: GTGACTCTTATCCTGAACTCACTGGAGAAGACATTC...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
3UTR CAA 72 bp AAAGTAGGAGATGATGTGCTAACTAATCTTACACAATaGGAAGGAGCACGACAATGTCCTGGTCAAACTACA +
Preference number: 4 (lower is better)
Translates to: KVGDDVLTNLTQ*EGARQCPGQTT
Trigger: TGTAGTTTGACCAGGACATTGTCGTGCTCCTTCCAATTGTGTAAGATTAGTTAGCACATCATCTCCTACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATTACTTGGTTGCTCTTaGAATCCTCCTCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKLLGCS*NPPQSC
Trigger: ACAAGACTGAGGAGGATTTCAAGAGCAACCAAGTAA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR GCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAGTTCAGATTTATTTTTaGCCCAGAAGCCATGCAAGG +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKVQIYF*PRSHAR
Trigger: CCTTGCATGGCTTCTGGGGCAAAAATAAATCTGAAC...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGCCAGATTTCAAACAGTaGCACGTATGTGAATCATGG +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMPDFKQ*HVCESW
Trigger: CCATGATTCACATACGTGCCACTGTTTGAAATCTGG...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGCCACCAACCAAATCTTaGCTGCTATTTGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMPPTKS*LLFESK
Trigger: TTTGGATTCAAATAGCAGTCAAGATTTGGTTGGTGG...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATATCATGAGTCGGCCTaGAGTCTTTTCTTGTTATTC +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKYHESA*SLFLLF
Trigger: GAATAACAAGAAAAGACTCCAGGCCGACTCATGATA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR TCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATTTCAAGTTCTGGATTaGGAGAATGAATGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKFQVLD*ENECLL
Trigger: GAGAAGACATTCATTCTCTCAATCCAGAACTTGAAA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAACAAATGCCGTCAGTTTaGTTCAGATTTATTTTTGCC +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKQMPSV*FRFIFA
Trigger: GGCAAAAATAAATCTGAACCAAACTGACGGCATTTG...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGTCAGGGCTCTACATATaGAAAATATATACAGGCTAC +
Preference number: 4 (lower is better)
Translates to: RCTRHRQASKHISKPKTMSGLYI*KIYTGY
Trigger: GTAGCCTGTATATATTTTCCATATGTAGAGCCCTGA...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATCAGGGCTCTACATATaGAAAATATATACAGGCTAC +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKSGLYI*KIYTGY
Trigger: GTAGCCTGTATATATTTTCCATATGTAGAGCCCTGA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CCA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAATTCATGACTTTACTTaGTTGCTCTTGAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: TRHRQASKHISKPKTMEKIHDFT*LLLKSS
Trigger: GGAGGATTTCAAGAGCAACCAAGTAAAGTCATGAAT...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS GCA 90 bp GCAGGGCGCGGGGTTGCATGGGGGTCCAGTCCAGCGTGCACACCGTaGACCTCCCAGCGCAGGGCTCCGCGCTCTCCCGTAGCCCGGCAA +
Preference number: 5 (lower is better)
Translates to: AGRGVAWGSSPACTP*TSQRRAPRSPVARQ
Trigger: TTGCCGGGCTACGGGAGAGCGCGGAGCCCTGCGCTGGGAGGTGCACGGTGTGCACGCTGGACTGGACCCCCATGCAACCCCGCGCCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382258.8
ENST00000464735.1
CDS CCA 90 bp GGTGGCCAGAGCGCTGCAGATAACGGCAGCCAGCGCCGTGTCCCGTaGGCTGGAGGCCGTGGACGCGATCTTCACGAGGTTGACCTTGCT +
Preference number: 5 (lower is better)
Translates to: GGQSAADNGSQRRVP*AGGRGRDLHEVDLA
Trigger: AGCAAGGTCAACCTCGTGAAGATCGCGTCCACGGCCTCCAGCCCACGGGACACGGCGCTGGCTGCCGTTATCTGCAGCGCTCTGGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS GCA 90 bp TGGCTGCAGAATGCACCCCACAACCAAGAGTCGCCGGGTTGGGGCTaGAGGCCTCCTCACAGCACATGGATGGGAGCAAGCGCACCGGCC +
Preference number: 5 (lower is better)
Translates to: WLQNAPHNQESPGWG*RPPHSTWMGASAPA
Trigger: GGCCGGTGCGCTTGCTCCCATCCATGTGCTGTGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTGGTTGTGGGGTGCATTCTGCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CCA 90 bp AACCAAGAGTCGCCGGGTTGGGGCTGCAGGCCTCCTCACAGCACATaGATGGGAGCAAGCGCACCGGCCCGCAGGTCTGCACTGAGTCAC +
Preference number: 5 (lower is better)
Translates to: NQESPGWGCRPPHST*MGASAPARRSALSH
Trigger: GTGACTCAGTGCAGACCTGCGGGCCGGTGCGCTTGCTCCCATCCATGTGCTGTGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CCA 90 bp GAAGACTGGCTGCAGAATGCACCCCACAACCAAGAGTCGCCGGGTTaGGGCTGCAGGCCTCCTCACAGCACATGGATGGGAGCAAGCGCA +
Preference number: 5 (lower is better)
Translates to: EDWLQNAPHNQESPG*GCRPPHSTWMGASA
Trigger: TGCGCTTGCTCCCATCCATGTGCTGTGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTGGTTGTGGGGTGCATTCTGCAGCCAGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS TCA 90 bp CGCAGTCCAGACAGGGCTTGCATTTCTGGAAGCCCCAGTCCTCCTTaGACCTGTGCAGCCGGCACGTCACACACTGTGCATCCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: RSPDRACISGSPSPP*TCAAGTSHTVHPPH
Trigger: ATGGGGAGGATGCACAGTGTGTGACGTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGCTTCCAGAAATGCAAGCCCTGTCTGGACTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS GCA 90 bp TTCTGCATCAGAGGCCAGGCATCTGAAAACTCGCCACAGATGGACTaGGTGAGGGATCCGAAGAAAGTCGGCACCATCTCCCCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: FCIRGQASENSPQMD*VRDPKKVGTISPAG
Trigger: CCCAGCCGGGGAGATGGTGCCGACTTTCTTCGGATCCCTCACGCAGTCCATCTGTGGCGAGTTTTCAGATGCCTGGCCTCTGATGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS GCA 90 bp GCCCCAGTCCTCCTTGAACCTGTGCAGCCGGCACGTCACACACTGTaGATCCTCCCCATAGCCGAAGCCACATTCCCGTTCAGCAACTTA +
Preference number: 5 (lower is better)
Translates to: APVLLEPVQPARHTL*ILPIAEATFPFSNL
Trigger: TAAGTTGCTGAACGGGAATGTGGCTTCGGCTATGGGGAGGATGCACAGTGTGTGACGTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403372.6
CDS GCA 90 bp GCCCCAGTCCTCCTTGAACCTGTGCAGCCGGCACGTCACACACTGTaGATCCTCCCCATAGCCGAAGCCACATTCCTTAGACAACTCCAT +
Preference number: 5 (lower is better)
Translates to: APVLLEPVQPARHTL*ILPIAEATFLRQLH
Trigger: ATGGAGTTGTCTAAGGAATGTGGCTTCGGCTATGGGGAGGATGCACAGTGTGTGACGTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
CDS-3UTR CAA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGAAGCCCCAGTCCTCCTaGAACCTGTGCAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQKPQSS*NLCSRH
Trigger: GTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGCTT...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTTTCACGAGGTTGACCTaGCTGGCACAGTGCGGTTCG +
Preference number: 5 (lower is better)
Translates to: SHSGYAHSATRITRHSPPFTRLT*LAQCGS
Trigger: CGAACCGCACTGTGCCAGCAAGGTCAACCTCGTGAA...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGGCGCAGGGCGCGGGGTaGCATGGGGGTCCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRAQGAG*HGGPVQ
Trigger: CTGGACTGGACCCCCATGCAACCCCGCGCCCTGCGC...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382263.3
CDS-3UTR CAA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATCTGGGCCTGCGTTTCTaGCCTGAAGACTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHLGLRF*PEDWLQ
Trigger: CTGCAGCCAGTCTTCAGGCAAGAAACGCAGGCCCAG...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS TCA 90 bp CAGTCCCCGCAGATGGCATCACTGGTGGCTGAACAATTTGCCTTCTaGAAGCGGTTCACCACTGCGCAGTCCAGACAGGGCTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: QSPQMASLVAEQFAF*KRFTTAQSRQGLHF
Trigger: GAAATGCAAGCCCTGTCTGGACTGCGCAGTGGTGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCGGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCTGGCCCACACTGGTaGCAGGGAACACAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQPGPHW*QGTQFP
Trigger: TGGAAACTGTGTTCCCTGCAACCAGTGTGGGCCAGG...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000382263.3
CDS-3UTR CAA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTTCACGAGGTTGACCTaGCTGGCACAGTGCGGTTCG +
Preference number: 5 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHFTRLT*LAQCGS
Trigger: CGAACCGCACTGTGCCAGCAAGGTCAACCTCGTGAA...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGGCGATCTTCACGAGGTaGACCTTGCTGGCACAGTGC +
Preference number: 5 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQAIFTR*TLLAQC
Trigger: GCACTGTGCCAGCAAGGTCAACCTCGTGAAGATCGC...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGCCAAGAGTCGCCGGGTaGGGGCTGCAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRPRVAG*GLQASS
Trigger: TGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTGG...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTCCAAGAGTCGCCGGGTaGGGGCTGCAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSPRVAG*GLQASS
Trigger: TGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTGG...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACACCAAGAGTCGCCGGGTaGGGGCTGCAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTPRVAG*GLQASS
Trigger: TGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTGG...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS TCA 90 bp ATAAAATCCTGGCAAGCAGTCCCCGCAGATGGCATCACTGGTGGCTaGACAATTTGCCTTCTGAAAGCGGTTCACCACTGCGCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: IKSWQAVPADGITGG*TICLLKAVHHCAVQ
Trigger: CTGGACTGCGCAGTGGTGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCGGGGACTGCTTGCCAGGATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS TCA 90 bp GATGTTGTCACCACCCATGGGATTCTGCATCAGAGGCCAGGCATCTaGAAACTCGCCACAGATGGACTGCGTGAGGGATCCGAAGAAAGT +
Preference number: 5 (lower is better)
Translates to: DVVTTHGILHQRPGI*KLATDGLREGSEES
Trigger: ACTTTCTTCGGATCCCTCACGCAGTCCATCTGTGGCGAGTTTTCAGATGCCTGGCCTCTGATGCAGAATCCCATGGGTGGTGACAACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CCA 90 bp TGGTGTTCCAGATGCCACTTAGACAACTCCATGCCTGGCCCACACTaGTTGCAGGGAACACAGTTTCCAGACCGATCCCTGAATTCTTGC +
Preference number: 5 (lower is better)
Translates to: WCSRCHLDNSMPGPH*LQGTQFPDRSLNSC
Trigger: GCAAGAATTCAGGGATCGGTCTGGAAACTGTGTTCCCTGCAACCAGTGTGGGCCAGGCATGGAGTTGTCTAAGTGGCATCTGGAACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464735.1
CDS-3UTR CAA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTTGGTGGCTGAACAATTaGCCTTCTGAAAGCGGTTCA +
Preference number: 5 (lower is better)
Translates to: SHSGYAHSATRITRHSPPWWLNN*PSESGS
Trigger: TGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCA...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS CCA 90 bp TCCTATAAAATCCTGGCAAGCAGTCCCCGCAGATGGCATCACTGGTaGCTGAACAATTTGCCTTCTGAAAGCGGTTCACCACTGCGCAGT +
Preference number: 5 (lower is better)
Translates to: SYKILASSPRRWHHW*LNNLPSESGSPLRS
Trigger: ACTGCGCAGTGGTGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCGGGGACTGCTTGCCAGGATTTTATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CCA 90 bp TCTTCCTATAAAATCCTGGCAAGCAGTCCCCGCAGATGGCATCACTaGTGGCTGAACAATTTGCCTTCTGAAAGCGGTTCACCACTGCGC +
Preference number: 5 (lower is better)
Translates to: SSYKILASSPRRWHH*WLNNLPSESGSPLR
Trigger: GCGCAGTGGTGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCGGGGACTGCTTGCCAGGATTTTATAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATAAGCCCCAGTCCTCCTaGAACCTGTGCAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYKPQSS*NLCSRH
Trigger: GTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGCTT...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAAAGCCCCAGTCCTCCTaGAACCTGTGCAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTKPQSS*NLCSRH
Trigger: GTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGCTT...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATCTGGGCCTGCGTTTCTaGCCTGAAGACTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYLGLRF*PEDWLQ
Trigger: CTGCAGCCAGTCTTCAGGCAAGAAACGCAGGCCCAG...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGTCAACCCATCCGTCTTaGAAGTCACTTTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQSTHPS*KSLLWQ
Trigger: CTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp AGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGCCCTCCTGATGTTTTGGGATTTTaGGCCAAAGTCTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: SHSGYAHSATRITRHSPPDVLGF*AKVSFP
Trigger: TGGGAATGAGACTTTGGCCAAAAATCCCAAAACATC...AGGAGGGCTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCAGTTGTGGACTGTGTGTaGGAAGCTTTTCCTAGTGCC +
Preference number: 5 (lower is better)
Translates to: CQRASAAQEATVVMPIQPVVDCV*EAFPSA
Trigger: GGCACTAGGAAAAGCTTCCAACACACAGTCCACAAC...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403372.6
CDS-3UTR CAA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATCCTGGCCCACACTGGTaGCAGGGAACACAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYPGPHW*QGTQFP
Trigger: TGGAAACTGTGTTCCCTGCAACCAGTGTGGGCCAGG...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000382263.3
CDS-3UTR CAA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACACACTCCATGTCTaGAAAGCCGACAAGTTTCGT +
Preference number: 5 (lower is better)
Translates to: CQRASAAQEATVVMPIQPHTLHV*KADKFR
Trigger: ACGAAACTTGTCGGCTTTCAAGACATGGAGTGTGTG...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAGCGATCTTCACGAGGTaGACCTTGCTGGCACAGTGC +
Preference number: 5 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTAIFTR*TLLAQC
Trigger: GCACTGTGCCAGCAAGGTCAACCTCGTGAAGATCGC...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGACAAAGGAGTACTCTTaGGGTTCCAGCACACGCTTC +
Preference number: 5 (lower is better)
Translates to: LEILLSLVNELLQHKKPQTKEYS*GSSTRF
Trigger: GAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGT...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGGGTTCAGATTTATTTTaGCCCCAGAAGCCATGCAAG +
Preference number: 5 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQGSDLF*PQKPCK
Trigger: CTTGCATGGCTTCTGGGGCAAAAATAAATCTGAACC...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATGGTTCAGATTTATTTTaGCCCCAGAAGCCATGCAAG +
Preference number: 5 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHGSDLF*PQKPCK
Trigger: CTTGCATGGCTTCTGGGGCAAAAATAAATCTGAACC...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCATCAACCCATCCGTCTTaGAAGTCACTTTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: CQRASAAQEATVVMPIQPSTHPS*KSLLWQ
Trigger: CTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS GCA 90 bp CCCGTTCAGCAACTTAGTTTCTCCTGGCAGCACTTCTGTGCCAAATaGTTCTACCTTCCCAAAAATGTATGTCAGCACAAGCCCAGACGA +
Preference number: 5 (lower is better)
Translates to: PVQQLSFSWQHFCAK*FYLPKNVCQHKPRR
Trigger: TCGTCTGGGCTTGTGCTGACATACATTTTTGGGAAGGTAGAAGCATTTGGCACAGAAGTGCTGCCAGGAGAAACTAAGTTGCTGAACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403372.6
CDS CCA 90 bp CAAGTTTCGTCTTCCTATAAAATCCTGGCAAGCAGTCCCCGCAGATaGCATCACTGGTGGCTGAACAATTTGCCTTCTGAAAGCGGTTCA +
Preference number: 5 (lower is better)
Translates to: QVSSSYKILASSPRR*HHWWLNNLPSESGS
Trigger: TGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCGGGGACTGCTTGCCAGGATTTTATAGGAAGACGAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCATCACAAAAAGAGATGTaGTCACCACCCATGGGATTC +
Preference number: 5 (lower is better)
Translates to: CQRASAAQEATVVMPIQPSQKEM*SPPMGF
Trigger: GAATCCCATGGGTGGTGACAACATCTCTTTTTGTGA...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGTCTTTGAAGTCACTTTaGTGGCAGAGAAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQSLKSL*WQRSFS
Trigger: TGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGA...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATACGCGAGGAAACTACTaGCATTTTCATAGCCATTGT +
Preference number: 5 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHTRGNY*HFHSHC
Trigger: ACAATGGCTATGAAAATGCAAGTAGTTTCCTCGCGT...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATGATGTTTTGGGATTTTaGGCCAAAGTCTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHDVLGF*AKVSFP
Trigger: TGGGAATGAGACTTTGGCCAAAAATCCCAAAACATC...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATCATGACTTTACTTGGTaGCTCTTGAAATCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHHDFTW*LLKSSS
Trigger: TGAGGAGGATTTCAAGAGCAACCAAGTAAAGTCATG...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS TCA 90 bp AAAACTCATCAGGTTCCCCCAAATCTTATGCTGGGAACAGAGTTCTaGTCTACTGTAAGTCAGTGCTGTGTTCACAGGGAACCCAGTCGC +
Preference number: 5 (lower is better)
Translates to: KTHQVPPNLMLGTEF*STVSQCCVHREPSR
Trigger: GCGACTGGGTTCCCTGTGAACACAGCACTGACTTACAGTAGATCAGAACTCTGTTCCCAGCATAAGATTTGGGGGAACCTGATGAGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382258.8
CDS GCA 90 bp TCCGTTCAGCAACTTAGTTTCTCCTGGCAGCACTTCTGTGCCAAATaGTTCTACCTTCCCAAAAATGTATGTCAGCACAAGCCCAGACGA +
Preference number: 5 (lower is better)
Translates to: SVQQLSFSWQHFCAK*FYLPKNVCQHKPRR
Trigger: TCGTCTGGGCTTGTGCTGACATACATTTTTGGGAAGGTAGAAGCATTTGGCACAGAAGTGCTGCCAGGAGAAACTAAGTTGCTGAACGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000248484.9
CDS-3UTR CAA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGGGTTCAGATTTATTTTaGCCCCAGAAGCCATGCAAG +
Preference number: 5 (lower is better)
Translates to: LEILLSLVNELLQHKKPQGSDLF*PQKPCK
Trigger: CTTGCATGGCTTCTGGGGCAAAAATAAATCTGAACC...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp CACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATTACCCGACACAGACTAATCTTACACAATaGGAAGGAGCACGACAATGT +
Preference number: 5 (lower is better)
Translates to: HKKPQWLCPFSHTHYPTQTNLTQ*EGARQC
Trigger: ACATTGTCGTGCTCCTTCCAATTGTGTAAGATTAGT...CTGTGTCGGGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCAACGCGAGGAAACTACTaGCATTTTCATAGCCATTGT +
Preference number: 5 (lower is better)
Translates to: CQRASAAQEATVVMPIQPTRGNY*HFHSHC
Trigger: ACAATGGCTATGAAAATGCAAGTAGTTTCCTCGCGT...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGAAATCCTCCTCAGTCTaGTCAACGAGCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRKSSSV*STSFCS
Trigger: GCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTT...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCATTTACTTGGTTGCTCTaGAAATCCTCCTCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: CQRASAAQEATVVMPIQPFTWLL*KSSSVL
Trigger: CAAGACTGAGGAGGATTTCAAGAGCAACCAAGTAAA...TGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS TCA 90 bp TGCAGATCAAAGGCAGACGAGCAGGGAGATGAAATGCCTGTAATCTaGTCAGTGAATCAGTTGCTGAACATCAAAGGCAGGGCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: CRSKADEQGDEMPVI*SVNQLLNIKGRAEF
Trigger: AAACTCAGCCCTGCCTTTGATGTTCAGCAACTGATTCACTGATCAGATTACAGGCATTTCATCTCCCTGCTCGTCTGCCTTTGATCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR CAA 90 bp GAGCTTCTGCAGCACAAGAAGCCACAGTGGTTATGCCCATTCAGCCACACGCATCAAATGTATTTATTGTaGGAGAGTTCCGTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: ELLQHKKPQWLCPFSHTHQMYLL*ESSVQQ
Trigger: TTGCTGAACGGAACTCTCCAACAATAAATACATTTG...ATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGCAGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248484.9
CDS-3UTR CAA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTCACACACTCCATGTCTaGAAAGCCGACAAGTTTCGT +
Preference number: 5 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSHTLHV*KADKFR
Trigger: ACGAAACTTGTCGGCTTTCAAGACATGGAGTGTGTG...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTACACACACTCCATGTCTaGAAAGCCGACAAGTTTCGT +
Preference number: 5 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLHTLHV*KADKFR
Trigger: ACGAAACTTGTCGGCTTTCAAGACATGGAGTGTGTG...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTTTCACGAGGTTGACCTaGCTGGCACAGTGCGGTTCG +
Preference number: 5 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCFTRLT*LAQCGS
Trigger: CGAACCGCACTGTGCCAGCAAGGTCAACCTCGTGAA...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGCTGGGCCTGCGTTTCTaGCCTGAAGACTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RCTRHRQASKHISKPKTMLGLRF*PEDWLQ
Trigger: CTGCAGCCAGTCTTCAGGCAAGAAACGCAGGCCCAG...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp CTTGAAATCCTCCTCAGTCTTGTCAACGAGCTTCTGCAGCACAAGAAGCCACAGAGTCCACAGACTCTTTaGTTAAACATGGATCACGTT +
Preference number: 5 (lower is better)
Translates to: LEILLSLVNELLQHKKPQSPQTL*LNMDHV
Trigger: AACGTGATCCATGTTTAACAAAAGAGTCTGTGGACT...CTGTGGCTTCTTGTGCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR CAA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAGCGATCTTCACGAGGTaGACCTTGCTGGCACAGTGC +
Preference number: 5 (lower is better)
Translates to: TRHRQASKHISKPKTMEKAIFTR*TLLAQC
Trigger: GCACTGTGCCAGCAAGGTCAACCTCGTGAAGATCGC...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTATCACAAAAAGAGATGTaGTCACCACCCATGGGATTC +
Preference number: 5 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLSQKEM*SPPMGF
Trigger: GAATCCCATGGGTGGTGACAACATCTCTTTTTGTGA...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGTTAGTGCATCCTGAGTaGATGCTGATTCTACCAGTG +
Preference number: 5 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRLVHPE*MLILPV
Trigger: CACTGGTAGAATCAGCATCAACTCAGGATGCACTAA...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATTCAACCCATCCGTCTTaGAAGTCACTTTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYSTHPS*KSLLWQ
Trigger: CTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGTTCTCCAGCCAGTGTTaGTCCTTGAAGTTAATCAGG +
Preference number: 5 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRFSSQC*SLKLIR
Trigger: CCTGATTAACTTCAAGGACAAACACTGGCTGGAGAA...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACATTAGTGCATCCTGAGTaGATGCTGATTCTACCAGTG +
Preference number: 5 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTLVHPE*MLILPV
Trigger: CACTGGTAGAATCAGCATCAACTCAGGATGCACTAA...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTAACGCGAGGAAACTACTaGCATTTTCATAGCCATTGT +
Preference number: 5 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLTRGNY*HFHSHC
Trigger: ACAATGGCTATGAAAATGCAAGTAGTTTCCTCGCGT...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTATTTACTTGGTTGCTCTaGAAATCCTCCTCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLFTWLL*KSSSVL
Trigger: CAAGACTGAGGAGGATTTCAAGAGCAACCAAGTAAA...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTTTACTTGGTTGCTCTaGAAATCCTCCTCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSFTWLL*KSSSVL
Trigger: CAAGACTGAGGAGGATTTCAAGAGCAACCAAGTAAA...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTACATGACTTTACTTGGTaGCTCTTGAAATCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLHDFTW*LLKSSS
Trigger: TGAGGAGGATTTCAAGAGCAACCAAGTAAAGTCATG...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTAATCTTGACTGCTATTaGAATCCAAAGACGTTGAGC +
Preference number: 5 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSNLDCY*NPKTLS
Trigger: GCTCAACGTCTTTGGATTCAAATAGCAGTCAAGATT...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTGCCTGGAGTCTTTTCTaGTTATTCATTGAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSAWSLF*LFIEVS
Trigger: TGAAACCTCAATGAATAACAAGAAAAGACTCCAGGC...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACATCTTTGAAGTCACTTTaGTGGCAGAGAAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTSLKSL*WQRSFS
Trigger: TGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGA...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTACTAATCTTACACAATaGGAAGGAGCACGACAATGT +
Preference number: 5 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSTNLTQ*EGARQC
Trigger: ACATTGTCGTGCTCCTTCCAATTGTGTAAGATTAGT...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGTTAAAAGACAGTGACTaGGGCAGGGCAATTCCAAAC +
Preference number: 5 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLLKDSD*GRAIPN
Trigger: GTTTGGAATTGCCCTGCCCAAGTCACTGTCTTTTAA...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTGTTATTCATTGTTCTCCAGCCAGTGTTaGTCCTTGAAGTTAATCAGG +
Preference number: 5 (lower is better)
Translates to: GKMQSIMSRPGVFSCYSLFSSQC*SLKLIR
Trigger: CCTGATTAACTTCAAGGACAAACACTGGCTGGAGAA...CAATGAATAACAAGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTAAATCCTCCTCAGTCTaGTCAACGAGCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCKSSSV*STSFCS
Trigger: GCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTT...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAGTCCATAAGCCTAACAAAGGAGTACTCTTTGGGTTCCAGCACACGCTTCTACAAATGTATTTATTGTaGGAGAGTTCTTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SVHKPNKGVLFGFQHTLLQMYLL*ESSSQP
Trigger: TGGCTGGGAAGAACTCTCCAACAATAAATACATTTG...TAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382263.3
CDS-3UTR CAA 90 bp TCTGGCTTTCTCCAGCCAGTGTTTGTCCTTGAAGTTAATCAGGGCTCTACATATAATCTTGACTGCTATTaGAATCCAAAGACGTTGAGC +
Preference number: 5 (lower is better)
Translates to: SGFLQPVFVLEVNQGSTYNLDCY*NPKTLS
Trigger: GCTCAACGTCTTTGGATTCAAATAGCAGTCAAGATT...ATATGTAGAGCCCTGATTAACTTCAAGGACAAACACTGGCTGGAGAAAGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGACAAAGGAGTACTCTTaGGGTTCCAGCACACGCTTC +
Preference number: 5 (lower is better)
Translates to: RCTRHRQASKHISKPKTMTKEYS*GSSTRF
Trigger: GAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGT...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAACAAAGGAGTACTCTTaGGGTTCCAGCACACGCTTC +
Preference number: 5 (lower is better)
Translates to: TRHRQASKHISKPKTMEKTKEYS*GSSTRF
Trigger: GAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGT...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TCAACCCATCCGTCTTTGAAGTCACTTTTGTGGCAGAGAAGCTTCTCATGTAGGTCAAATGCCGTCAGTTaGGTTCAGATTTATTTTTGC +
Preference number: 5 (lower is better)
Translates to: STHPSLKSLLWQRSFSCRSNAVS*VQIYFC
Trigger: GCAAAAATAAATCTGAACCAAACTGACGGCATTTGA...CCTACATGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGACGGATGGGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GCTTCTCATGTAGGAAAGATGCAGAGTATCATGAGTCGGCCTGGAGTCTTTTCTTCAAATGCCGTCAGTTaGGTTCAGATTTATTTTTGC +
Preference number: 5 (lower is better)
Translates to: ASHVGKMQSIMSRPGVFSSNAVS*VQIYFC
Trigger: GCAAAAATAAATCTGAACCAAACTGACGGCATTTGA...AGAAAAGACTCCAGGCCGACTCATGATACTCTGCATCTTTCCTACATGAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp GGTAGGGGATGGAGCACTTTAATAGAAAGAAGCACCGTCCTCTTAAATCCAACAGCCTGGAGTCTTTTCTaGTTATTCATTGAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: GRGWSTLIERSTVLLNPTAWSLF*LFIEVS
Trigger: TGAAACCTCAATGAATAACAAGAAAAGACTCCAGGC...TGTTGGATTTAAGAGGACGGTGCTTCTTTCTATTAAAGTGCTCCATCCCCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAAAATCCTCCTCAGTCTaGTCAACGAGCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TRHRQASKHISKPKTMEKKSSSV*STSFCS
Trigger: GCTGCAGAAGCTCGTTGACAAGACTGAGGAGGATTT...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS CCA 90 bp ATGTATTTATTGTTGGAGAGTTCCGTTCAGCAACTTAGTTTCTCCTaGCAGCACTTCTGTGCCAAATGCTTCTACCTTCCCAAAAATGTA +
Preference number: 5 (lower is better)
Translates to: MYLLLESSVQQLSFS*QHFCAKCFYLPKNV
Trigger: TACATTTTTGGGAAGGTAGAAGCATTTGGCACAGAAGTGCTGCCAGGAGAAACTAAGTTGCTGAACGGAACTCTCCAACAATAAATACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000248484.9
CDS-3UTR CAA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATGGTGGCTGAACAATTaGCCTTCTGAAAGCGGTTCA +
Preference number: 5 (lower is better)
Translates to: TRHRQASKHISKPKTMEKWWLNN*PSESGS
Trigger: TGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGTCACAAAAAGAGATGTaGTCACCACCCATGGGATTC +
Preference number: 5 (lower is better)
Translates to: RCTRHRQASKHISKPKTMSQKEM*SPPMGF
Trigger: GAATCCCATGGGTGGTGACAACATCTCTTTTTGTGA...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATTAGTGCATCCTGAGTaGATGCTGATTCTACCAGTG +
Preference number: 5 (lower is better)
Translates to: TRHRQASKHISKPKTMEKLVHPE*MLILPV
Trigger: CACTGGTAGAATCAGCATCAACTCAGGATGCACTAA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGTTAAAAGACAGTGACTaGGGCAGGGCAATTCCAAAC +
Preference number: 5 (lower is better)
Translates to: RCTRHRQASKHISKPKTMLKDSD*GRAIPN
Trigger: GTTTGGAATTGCCCTGCCCAAGTCACTGTCTTTTAA...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp TTCATCCAAACCCCTACAAATTGTGCATTTTCTTCTAGTCCTAACATGTGGTGTAGTCCACAGACTCTTTaGTTAAACATGGATCACGTT +
Preference number: 5 (lower is better)
Translates to: FIQTPTNCAFSSSPNMWCSPQTL*LNMDHV
Trigger: AACGTGATCCATGTTTAACAAAAGAGTCTGTGGACT...ACACCACATGTTAGGACTAGAAGAAAATGCACAATTTGTAGGGGTTTGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR CAA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATCTTTGAAGTCACTTTaGTGGCAGAGAAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: TRHRQASKHISKPKTMEKSLKSL*WQRSFS
Trigger: TGAGAAGCTTCTCTGCCACAAAAGTGACTTCAAAGA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGATGTTTTGGGATTTTaGGCCAAAGTCTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: RCTRHRQASKHISKPKTMDVLGF*AKVSFP
Trigger: TGGGAATGAGACTTTGGCCAAAAATCCCAAAACATC...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGCATGACTTTACTTGGTaGCTCTTGAAATCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RCTRHRQASKHISKPKTMHDFTW*LLKSSS
Trigger: TGAGGAGGATTTCAAGAGCAACCAAGTAAAGTCATG...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAAAATCTTGACTGCTATTaGAATCCAAAGACGTTGAGC +
Preference number: 5 (lower is better)
Translates to: TRHRQASKHISKPKTMEKNLDCY*NPKTLS
Trigger: GCTCAACGTCTTTGGATTCAAATAGCAGTCAAGATT...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS-3UTR CAA 90 bp AGATGTACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGACTAATCTTACACAATaGGAAGGAGCACGACAATGT +
Preference number: 5 (lower is better)
Translates to: RCTRHRQASKHISKPKTMTNLTQ*EGARQC
Trigger: ACATTGTCGTGCTCCTTCCAATTGTGTAAGATTAGT...CATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGTACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS TCA 90 bp TGTAATCTGATCAGTGAATCAGTTGCTGAACATCAAAGGCAGGGCTaGGTTTATATATATGCATGGATATCAAAGAAAGTTCACTTTCAG +
Preference number: 5 (lower is better)
Translates to: CNLISESVAEHQRQG*VYIYAWISKKVHFQ
Trigger: CTGAAAGTGAACTTTCTTTGATATCCATGCATATATATAAACTCAGCCCTGCCTTTGATGTTCAGCAACTGATTCACTGATCAGATTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS-3UTR CAA 90 bp ACCAGACACAGGCAAGCTAGTAAACACATATCAAAACCTAAAACTATGGAGAAATCAAATGCCGTCAGTTaGGTTCAGATTTATTTTTGC +
Preference number: 5 (lower is better)
Translates to: TRHRQASKHISKPKTMEKSNAVS*VQIYFC
Trigger: GCAAAAATAAATCTGAACCAAACTGACGGCATTTGA...TTTCTCCATAGTTTTAGGTTTTGATATGTGTTTACTAGCTTGCCTGTGTCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS GCA 72 bp GCAGGGCGCGGGGTTGCATGGGGGTCCAGTCCAGCGTaGACACCGTGCACCTCCCAGCGCAGGGCTCCGCGC +
Preference number: 6 (lower is better)
Translates to: AGRGVAWGSSPA*TPCTSQRRAPR
Trigger: GCGCGGAGCCCTGCGCTGGGAGGTGCACGGTGTGCACGCTGGACTGGACCCCCATGCAACCCCGCGCCCTGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382258.8
ENST00000464735.1
CDS TCA 72 bp GGATGGGAGCAAGCGCACCGGCCCGCAGGTCTGCACTaGGTCACGGCGGCACTGGCAGCAGGCTCTGTGGGC +
Preference number: 6 (lower is better)
Translates to: GWEQAHRPAGLH*VTAALAAGSVG
Trigger: GCCCACAGAGCCTGCTGCCAGTGCCGCCGTGACTCAGTGCAGACCTGCGGGCCGGTGCGCTTGCTCCCATCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS GCA 72 bp GGGGTTGCATGGGGGTCCAGTCCAGCGTGCACACCGTaGACCTCCCAGCGCAGGGCTCCGCGCTCTCCCGTA +
Preference number: 6 (lower is better)
Translates to: GVAWGSSPACTP*TSQRRAPRSPV
Trigger: TACGGGAGAGCGCGGAGCCCTGCGCTGGGAGGTGCACGGTGTGCACGCTGGACTGGACCCCCATGCAACCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382258.8
ENST00000464735.1
CDS CCA 72 bp TCGCCGGGTTGGGGCTGCAGGCCTCCTCACAGCACATaGATGGGAGCAAGCGCACCGGCCCGCAGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: SPGWGCRPPHST*MGASAPARRSA
Trigger: TGCAGACCTGCGGGCCGGTGCGCTTGCTCCCATCCATGTGCTGTGAGGAGGCCTGCAGCCCCAACCCGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CAA 72 bp CGCGGAGCAGTCCTGGTTAAGGCGCAGGGCGCGGGGTaGCATGGGGGTCCAGTCCAGCGTGCACACCGTGCA +
Preference number: 6 (lower is better)
Translates to: RGAVLVKAQGAG*HGGPVQRAHRA
Trigger: TGCACGGTGTGCACGCTGGACTGGACCCCCATGCAACCCCGCGCCCTGCGCCTTAACCAGGACTGCTCCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382258.8
ENST00000382263.3
ENST00000464735.1
CDS CCA 72 bp AGCGCTGCAGATAACGGCAGCCAGCGCCGTGTCCCGTaGGCTGGAGGCCGTGGACGCGATCTTCACGAGGTT +
Preference number: 6 (lower is better)
Translates to: SAADNGSQRRVP*AGGRGRDLHEV
Trigger: AACCTCGTGAAGATCGCGTCCACGGCCTCCAGCCCACGGGACACGGCGCTGGCTGCCGTTATCTGCAGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS TCA 72 bp GTGGGCTGGAGGCCGTGGACGCGATCTTCACGAGGTTaGCCTTGCTGGCACAGTGCGGTTCGTAAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: VGWRPWTRSSRG*PCWHSAVRKEE
Trigger: CTCCTCCTTACGAACCGCACTGTGCCAGCAAGGTCAACCTCGTGAAGATCGCGTCCACGGCCTCCAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS GCA 72 bp AATGCACCCCACAACCAAGAGTCGCCGGGTTGGGGCTaGAGGCCTCCTCACAGCACATGGATGGGAGCAAGC +
Preference number: 6 (lower is better)
Translates to: NAPHNQESPGWG*RPPHSTWMGAS
Trigger: GCTTGCTCCCATCCATGTGCTGTGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTGGTTGTGGGGTGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CCA 72 bp CTGCAGAATGCACCCCACAACCAAGAGTCGCCGGGTTaGGGCTGCAGGCCTCCTCACAGCACATGGATGGGA +
Preference number: 6 (lower is better)
Translates to: LQNAPHNQESPG*GCRPPHSTWMG
Trigger: TCCCATCCATGTGCTGTGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTGGTTGTGGGGTGCATTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CAA 90 bp GCGCAGTCCAGACAGGGCTTGCATTTCTGGAAGCCCCAGTCCTCCTaGAACCTGTGCAGCCGGCACGTCACACACTGTGCATCCTCCCCA +
Preference number: 6 (lower is better)
Translates to: AQSRQGLHFWKPQSS*NLCSRHVTHCASSP
Trigger: TGGGGAGGATGCACAGTGTGTGACGTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGCTTCCAGAAATGCAAGCCCTGTCTGGACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CCA 72 bp GAGGGATCCGAAGAAAGTCGGCACCATCTCCCCGGCTaGGCCTGCGTTTCTTGCCTGAAGACTGGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: EGSEESRHHLPG*ACVSCLKTGCR
Trigger: TCTGCAGCCAGTCTTCAGGCAAGAAACGCAGGCCCAGCCGGGGAGATGGTGCCGACTTTCTTCGGATCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CCA 72 bp TTCACCACTGCGCAGTCCAGACAGGGCTTGCATTTCTaGAAGCCCCAGTCCTCCTTGAACCTGTGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: FTTAQSRQGLHF*KPQSSLNLCSR
Trigger: CCGGCTGCACAGGTTCAAGGAGGACTGGGGCTTCCAGAAATGCAAGCCCTGTCTGGACTGCGCAGTGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CAA 90 bp CTGGCAAGCAGTCCCCGCAGATGGCATCACTGGTGGCTGAACAATTaGCCTTCTGAAAGCGGTTCACCACTGCGCAGTCCAGACAGGGCT +
Preference number: 6 (lower is better)
Translates to: LASSPRRWHHWWLNN*PSESGSPLRSPDRA
Trigger: AGCCCTGTCTGGACTGCGCAGTGGTGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCGGGGACTGCTTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS TCA 72 bp GACAGGGCTTGCATTTCTGGAAGCCCCAGTCCTCCTTaGACCTGTGCAGCCGGCACGTCACACACTGTGCAT +
Preference number: 6 (lower is better)
Translates to: DRACISGSPSPP*TCAAGTSHTVH
Trigger: ATGCACAGTGTGTGACGTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGCTTCCAGAAATGCAAGCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS GCA 72 bp TTGCATTTCTGGAAGCCCCAGTCCTCCTTGAACCTGTaGAGCCGGCACGTCACACACTGTGCATCCTCCCCA +
Preference number: 6 (lower is better)
Translates to: LHFWKPQSSLNL*SRHVTHCASSP
Trigger: TGGGGAGGATGCACAGTGTGTGACGTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGCTTCCAGAAATGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CAA 72 bp AGACAGGGCTTGCATTTCTGGAAGCCCCAGTCCTCCTaGAACCTGTGCAGCCGGCACGTCACACACTGTGCA +
Preference number: 6 (lower is better)
Translates to: RQGLHFWKPQSS*NLCSRHVTHCA
Trigger: TGCACAGTGTGTGACGTGCCGGCTGCACAGGTTCAAGGAGGACTGGGGCTTCCAGAAATGCAAGCCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS TCA 72 bp CACTGGCAGCAGGCTCTGTGGGCATATTCGTGGAGCTaGGGTCTGTCAAAACACGACAGCTCAGAGCCGTTG +
Preference number: 6 (lower is better)
Translates to: HWQQALWAYSWS*GLSKHDSSEPL
Trigger: CAACGGCTCTGAGCTGTCGTGTTTTGACAGACCTCAGCTCCACGAATATGCCCACAGAGCCTGCTGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS TCA 72 bp ACCACCCATGGGATTCTGCATCAGAGGCCAGGCATCTaGAAACTCGCCACAGATGGACTGCGTGAGGGATCC +
Preference number: 6 (lower is better)
Translates to: TTHGILHQRPGI*KLATDGLREGS
Trigger: GGATCCCTCACGCAGTCCATCTGTGGCGAGTTTTCAGATGCCTGGCCTCTGATGCAGAATCCCATGGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS GCA 72 bp CTCCTTGAACCTGTGCAGCCGGCACGTCACACACTGTaGATCCTCCCCATAGCCGAAGCCACATTCCTTAGA +
Preference number: 6 (lower is better)
Translates to: LLEPVQPARHTL*ILPIAEATFLR
Trigger: TCTAAGGAATGTGGCTTCGGCTATGGGGAGGATGCACAGTGTGTGACGTGCCGGCTGCACAGGTTCAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
CDS GCA 72 bp AGAGGCCAGGCATCTGAAAACTCGCCACAGATGGACTaGGTGAGGGATCCGAAGAAAGTCGGCACCATCTCC +
Preference number: 6 (lower is better)
Translates to: RGQASENSPQMD*VRDPKKVGTIS
Trigger: GGAGATGGTGCCGACTTTCTTCGGATCCCTCACGCAGTCCATCTGTGGCGAGTTTTCAGATGCCTGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS TCA 72 bp CAGATGGCATCACTGGTGGCTGAACAATTTGCCTTCTaGAAGCGGTTCACCACTGCGCAGTCCAGACAGGGC +
Preference number: 6 (lower is better)
Translates to: QMASLVAEQFAF*KRFTTAQSRQG
Trigger: GCCCTGTCTGGACTGCGCAGTGGTGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS TCA 72 bp TGGCAAGCAGTCCCCGCAGATGGCATCACTGGTGGCTaGACAATTTGCCTTCTGAAAGCGGTTCACCACTGC +
Preference number: 6 (lower is better)
Translates to: WQAVPADGITGG*TICLLKAVHHC
Trigger: GCAGTGGTGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCGGGGACTGCTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CCA 72 bp CCACATTCCTTAGACAACTCCATGCCTGGCCCACACTaGTTGCAGGGAACACAGTTTCCAGACCGATCCCTG +
Preference number: 6 (lower is better)
Translates to: PHSLDNSMPGPH*LQGTQFPDRSL
Trigger: CAGGGATCGGTCTGGAAACTGTGTTCCCTGCAACCAGTGTGGGCCAGGCATGGAGTTGTCTAAGGAATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
CDS CAA 72 bp AGTCCCCGCAGATGGCATCACTGGTGGCTGAACAATTaGCCTTCTGAAAGCGGTTCACCACTGCGCAGTCCA +
Preference number: 6 (lower is better)
Translates to: SPRRWHHWWLNN*PSESGSPLRSP
Trigger: TGGACTGCGCAGTGGTGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCGGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS TCA 72 bp GGTCTGTCAAAACACGACAGCTCAGAGCCGTTGTACTaGATGTCCTGTGACCGCAGAGACCAGCTGGGTTTC +
Preference number: 6 (lower is better)
Translates to: GLSKHDSSEPLY*MSCDRRDQLGF
Trigger: GAAACCCAGCTGGTCTCTGCGGTCACAGGACATTCAGTACAACGGCTCTGAGCTGTCGTGTTTTGACAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CAA 72 bp TGCCACTTAGACAACTCCATGCCTGGCCCACACTGGTaGCAGGGAACACAGTTTCCAGACCGATCCCTGAAT +
Preference number: 6 (lower is better)
Translates to: CHLDNSMPGPHW*QGTQFPDRSLN
Trigger: ATTCAGGGATCGGTCTGGAAACTGTGTTCCCTGCAACCAGTGTGGGCCAGGCATGGAGTTGTCTAAGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464735.1
CDS CAA 72 bp CATTCCTTAGACAACTCCATGCCTGGCCCACACTGGTaGCAGGGAACACAGTTTCCAGACCGATCCCTGAAT +
Preference number: 6 (lower is better)
Translates to: HSLDNSMPGPHW*QGTQFPDRSLN
Trigger: ATTCAGGGATCGGTCTGGAAACTGTGTTCCCTGCAACCAGTGTGGGCCAGGCATGGAGTTGTCTAAGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
CDS TCA 72 bp ACACGACAGCTCAGAGCCGTTGTACTGAATGTCCTGTaGCCGCAGAGACCAGCTGGGTTTCTTCTCCATAAA +
Preference number: 6 (lower is better)
Translates to: TRQLRAVVLNVL*PQRPAGFLLHK
Trigger: TTTATGGAGAAGAAACCCAGCTGGTCTCTGCGGTCACAGGACATTCAGTACAACGGCTCTGAGCTGTCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CCA 72 bp AAAATCCTGGCAAGCAGTCCCCGCAGATGGCATCACTaGTGGCTGAACAATTTGCCTTCTGAAAGCGGTTCA +
Preference number: 6 (lower is better)
Translates to: KILASSPRRWHH*WLNNLPSESGS
Trigger: TGAACCGCTTTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCGGGGACTGCTTGCCAGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CAA 90 bp TTCGTAAGGAGGAGGAGGGTCTCCACAAGGCACACACTCCATGTCTaGAAAGCCGACAAGTTTCGTCTTCCTATAAAATCCTGGCAAGCA +
Preference number: 6 (lower is better)
Translates to: FVRRRRVSTRHTLHV*KADKFRLPIKSWQA
Trigger: TGCTTGCCAGGATTTTATAGGAAGACGAAACTTGTCGGCTTTCAAGACATGGAGTGTGTGCCTTGTGGAGACCCTCCTCCTCCTTACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CCA 72 bp TCTTCCTATAAAATCCTGGCAAGCAGTCCCCGCAGATaGCATCACTGGTGGCTGAACAATTTGCCTTCTGAA +
Preference number: 6 (lower is better)
Translates to: SSYKILASSPRR*HHWWLNNLPSE
Trigger: TTCAGAAGGCAAATTGTTCAGCCACCAGTGATGCCATCTGCGGGGACTGCTTGCCAGGATTTTATAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CAA 72 bp AGGAGGAGGGTCTCCACAAGGCACACACTCCATGTCTaGAAAGCCGACAAGTTTCGTCTTCCTATAAAATCC +
Preference number: 6 (lower is better)
Translates to: RRRVSTRHTLHV*KADKFRLPIKS
Trigger: GGATTTTATAGGAAGACGAAACTTGTCGGCTTTCAAGACATGGAGTGTGTGCCTTGTGGAGACCCTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS CAA 90 bp AAGGTCCAGACTGCTCAGTCCATAAGCCTAACAAAGGAGTACTCTTaGGGTTCCAGCACACGCTTCTACTGCAGAAAGAAGCAGGTTCTT +
Preference number: 6 (lower is better)
Translates to: KVQTAQSISLTKEYS*GSSTRFYCRKKQVL
Trigger: AAGAACCTGCTTCTTTCTGCAGTAGAAGCGTGTGCTGGAACCCAAAGAGTACTCCTTTGTTAGGCTTATGGACTGAGCAGTCTGGACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248484.9
ENST00000382263.3
ENST00000403372.6
CDS CCA 72 bp GATAAGAGTCACAAAAAGAGATGTTGTCACCACCCATaGGATTCTGCATCAGAGGCCAGGCATCTGAAAACT +
Preference number: 6 (lower is better)
Translates to: DKSHKKRCCHHP*DSASEARHLKT
Trigger: AGTTTTCAGATGCCTGGCCTCTGATGCAGAATCCCATGGGTGGTGACAACATCTCTTTTTGTGACTCTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248484.9
ENST00000382258.8
ENST00000382263.3
ENST00000403372.6
CDS GCA 72 bp CAACTTAGTTTCTCCTGGCAGCACTTCTGTGCCAAATaGTTCTACCTTCCCAAAAATGTATGTCAGCACAAG +
Preference number: 6 (lower is better)
Translates to: QLSFSWQHFCAK*FYLPKNVCQHK
Trigger: CTTGTGCTGACATACATTTTTGGGAAGGTAGAAGCATTTGGCACAGAAGTGCTGCCAGGAGAAACTAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6
CDS TCA 72 bp ATCAGTGAATCAGTTGCTGAACATCAAAGGCAGGGCTaGGTTTATATATATGCATGGATATCAAAGAAAGTT +
Preference number: 6 (lower is better)
Translates to: ISESVAEHQRQG*VYIYAWISKKV
Trigger: AACTTTCTTTGATATCCATGCATATATATAAACTCAGCCCTGCCTTTGATGTTCAGCAACTGATTCACTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248484.9
ENST00000403372.6