Pregenerated sensors for TNFRSF18 (Homo sapiens)
Ensembl gene IDs: ENSG00000186891Ensembl transcript IDs: ENST00000328596.10, ENST00000379265.5, ENST00000379268.7, ENST00000486728.5
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATGGTCCAGGGCGCTGGTCACTGCCACCTTCCTGCACCCACTTCTaGTGCCAGGGGAGCAGGGCCCGGCCCAGAGCAGAACGCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: HGPGRWSLPPSCTHF*CQGSRARPRAERRA Trigger: GGCTCTGCGTTCTGCTCTGGGCCGGGCCCTGCTCCCCTGGCAGCAGAAGTGGGTGCAGGAAGGTGGCAGTGACCAGCGCCCTGGACCATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| 3UTR CCA 90 bp | CTCTCTCTCCCTCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATaGTCCAGGGCGCTGGTCACTGCCACCTTCCTGCACCCACTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LSLPPAGPSRGRRTA*SRALVTATFLHPLL Trigger: CAGAAGTGGGTGCAGGAAGGTGGCAGTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGAGGGAGAGAGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCAAGAGCCCCTGCGGCCTaGGGAGCTCCTGGGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LLQGPAAAAELHGPGRWSRAPAA*GAPGEG Trigger: CCCCTCCCCAGGAGCTCCCCAGGCCGCAGGGGCTCT...TGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCTCCCGTCCTAAGACCCCACCCCATCAGGGCCAGCAAGGGAGGAAGGGGAGAACGCAGAGCCCCTaGGGCCTGGGGAGCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TASRPKTPPHQGQQGRKGRTQSP*GLGSSW Trigger: CCAGGAGCTCCCCAGGCCGCAGGGGCTCTGCGTTCT...CCCCTTCCTCCCTTGCTGGCCCTGATGGGGTGGGGTCTTAGGACGGGAGGCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| 3UTR CCA 72 bp | CCTCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATaGTCCAGGGCGCTGGTCACTGCCACCTTCCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: PPAGPSRGRRTA*SRALVTATFLH Trigger: GTGCAGGAAGGTGGCAGTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| 3UTR GCA 72 bp | TCTCCCTCCTGCAGGGCCCAGCCGCGGCCGCCGAACTaGATGGTCCAGGGCGCTGGTCACTGCCACCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: SPSCRAQPRPPN*MVQGAGHCHLP Trigger: AGGAAGGTGGCAGTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGAGGGAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| 3UTR GCA 72 bp | AAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTaGTGGGCACTGCACACCCACGGACACAGCCTCCCG | + |
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Preference number: 3 (lower is better) Translates to: KCLLKVPCSRVP*WALHTHGHSLP Trigger: CGGGAGGCTGTGTCCGTGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR TCA 90 bp | AGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCACTGCCACCAGCAGCGCGTCGTGTaGACCCGGCAGCAGCGCGCG | + |
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Preference number: 4 (lower is better) Translates to: RAQPRPPNCMVQGAGHCHQQRVV*TRQQRA Trigger: CGCGCGCTGCTGCCGGGTTCACACGACGCGCTGCTG...GTGGCAGTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | GCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCACTGCCCCGCCCCTTCTCCTCTaGCGATCGCTCGCCCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: AGPSRGRRTAWSRALVTAPPLLL*RSLAPL Trigger: GAGCGGGGCGAGCGATCGGCAGAGGAGAAGGGGCGG...GGCAGTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR TCA 90 bp | AGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCACGGACACAGCCGGCGCTGACCCAGGCTaGGCGCGCACAGCAGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: RSPAAGSRAGHCTPTDTAGADPG*ARTAAP Trigger: TGGCGCTGCTGTGCGCGCTCAGCCTGGGTCAGCGCC...GGCTGTGTCCGTGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | TCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCACTCTCTCTCTCCCTCCTaGAGGGCCCAGCCGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SCRAQPRPPNCMVQGAGHSLSPS*RAQPRP Trigger: CGGCCGCGGCTGGGCCCTGCAGGAGGGAGAGAGAGA...GTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | AGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCACGGACACAGCCTCTCTCTCTCCCTCCTaGAGGGCCCAGCCGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RSPAAGSRAGHCTPTDTASLSPS*RAQPRP Trigger: CGGCCGCGGCTGGGCCCTGCAGGAGGGAGAGAGAGA...GGCTGTGTCCGTGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | CTCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCAGGGGGACAAGGGTGGTaGCGGCAGGTCGTGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LLQGPAAAAELHGPGRWSGGQGW*RQVVQQ Trigger: TTGCTGCACGACCTGCCGGCACCACCCTTGTCCCCC...TGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | TCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCACTGGGACTGTACCCCCTaGCCTGGGGGACAAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SCRAQPRPPNCMVQGAGHWDCTP*PGGQGW Trigger: CCACCCTTGTCCCCCAGGCCAGGGGGTACAGTCCCA...GTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | AGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCACGGACACAGCCGGTGCCGGCAGGTCGTaGAGCAAGGGTCTCCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: RSPAAGSRAGHCTPTDTAGAGRS*SKGLRS Trigger: ACTGCGGAGACCCTTGCTGCACGACCTGCCGGCACC...GGCTGTGTCCGTGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | CTCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCAGTCCAAGGTTTGCAGTaGCCTTCGTGGCCCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LLQGPAAAAELHGPGRWSVQGLQ*PSWPPE Trigger: CTCCGGGGGCCACGAAGGCCACTGCAAACCTTGGAC...TGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | GGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCACGGACACAGCCTGGCCGCCGAACTGCATaGTCCAGGGCGCTGGTCACT | + |
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Preference number: 4 (lower is better) Translates to: GPLQPGPVLGTAHPRTQPGRRTA*SRALVT Trigger: AGTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCC...AGGCTGTGTCCGTGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | AGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCACGGACACAGCCGGCCGCCGAACTGCATaGTCCAGGGCGCTGGTCACT | + |
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Preference number: 4 (lower is better) Translates to: RSPAAGSRAGHCTPTDTAGRRTA*SRALVT Trigger: AGTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCC...GGCTGTGTCCGTGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | AGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCACTGCCACACCTCCAGCAGCAGCTaGGTCTCTCGGGGCCACATG | + |
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Preference number: 4 (lower is better) Translates to: RAQPRPPNCMVQGAGHCHTSSSS*VSRGHM Trigger: CATGTGGCCCCGAGAGACCCAGCTGCTGCTGGAGGT...GTGGCAGTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | ACAGCCTCCCGTCCTAAGACCCCACCCCATCAGGGCCAGCAAGGGAGGAAGGGGCCGCGGCCGCCGAACTaGATGGTCCAGGGCGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TASRPKTPPHQGQQGRKGPRPPN*MVQGAG Trigger: ACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGG...CCCCTTCCTCCCTTGCTGGCCCTGATGGGGTGGGGTCTTAGGACGGGAGGCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | GAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCACGGACACAGGCGCCCATCGCCCCGTaGTGTGCCATGCTCGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: EGPLQPGPVLGTAHPRTQAPIAP*CAMLGF Trigger: AAACCCGAGCATGGCACAGCACGGGGCGATGGGCGC...CTGTGTCCGTGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | AGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCACTGCCACTCTCTCGGGGCCACATaGACTGACTCCTCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RAQPRPPNCMVQGAGHCHSLGAT*TDSSAA Trigger: GGCAGCTGAGGAGTCAGTGCATGTGGCCCCGAGAGA...GTGGCAGTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | GTGTCTCTCTCTCCCTCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCTTGCAGTGGCCTTCGTaGCCCCCGGAGAAGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: VSLSPSCRAQPRPPNCMVLQWPS*PPEKVP Trigger: GGGGACCTTCTCCGGGGGCCACGAAGGCCACTGCAA...GACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGAGGGAGAGAGAGACAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | TCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCACAGTCTGTCCAAGGTTTaGAGTGGCCTTCGTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SCRAQPRPPNCMVQGAGHSLSKV*SGLRGP Trigger: GGGGCCACGAAGGCCACTGCAAACCTTGGACAGACT...GTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | GTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCACCACCCAAGCGGCTCTaGCGGCGGGGACCCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: VFIEGPLQPGPVLGTAHPPPKRL*RRGPWD Trigger: GTCCCAGGGTCCCCGCCGGCAGAGCCGCTTGGGTGG...TGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR TCA 90 bp | AAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCGGCGCTGACCCAGGCTaGGCGCGCACAGCAGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: KCLLKVPCSRVPCWALHTGADPG*ARTAAP Trigger: TGGCGCTGCTGTGCGCGCTCAGCCTGGGTCAGCGCC...GGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR TCA 90 bp | CTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCAGCAGCGCGTCGTGTaGACCCGGCAGCAGCGCGCG | + |
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Preference number: 4 (lower is better) Translates to: LDKCLLKVPCSRVPCWALQQRVV*TRQQRA Trigger: CGCGCGCTGCTGCCGGGTTCACACGACGCGCTGCTG...CAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | TCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCACCAAGGGTCTCCGCAGTaGAATTCAGGCTGGACACAC | + |
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Preference number: 4 (lower is better) Translates to: SCRAQPRPPNCMVQGAGHQGSPQ*NSGWTH Trigger: GTGTGTCCAGCCTGAATTCCACTGCGGAGACCCTTG...GTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | GACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACAGAGCCCCTGCGGCCTaGGGAGCTCCTGGGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: DKCLLKVPCSRVPCWALHRAPAA*GAPGEG Trigger: CCCCTCCCCAGGAGCTCCCCAGGCCGCAGGGGCTCT...GTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGGTGAGAAACCCGAACTaGGTGCAGTCTGTCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLLQGPAAAAELHGPGRWVRNPN*VQSVQG Trigger: ACCTTGGACAGACTGCACCCAGTTCGGGTTTCTCAC...CCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGAGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | GGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACCGCCCCTTCTCCTCTaGCGATCGCTCGCCCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: GQVFIEGPLQPGPVLGTAPPLLL*RSLAPL Trigger: GAGCGGGGCGAGCGATCGGCAGAGGAGAAGGGGCGG...TGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | CTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCCGCGGCCGCCGAACTaGATGGTCCAGGGCGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LDKCLLKVPCSRVPCWALPRPPN*MVQGAG Trigger: ACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGG...CAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | GAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCACGGACACAGCATCGCCCCGTGCTGTaGCATGCTCGGGTTTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: EGPLQPGPVLGTAHPRTQHRPVL*HARVSR Trigger: TCTTGAAACCCGAGCATGGCACAGCACGGGGCGATG...CTGTGTCCGTGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | ACTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTAGAGCCCCTGCGGCCTaGGGAGCTCCTGGGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: TGQVFIEGPLQPGPVLGTRAPAA*GAPGEG Trigger: CCCCTCCCCAGGAGCTCCCCAGGCCGCAGGGGCTCT...AGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | CGGACACAGCCTCCCGTCCTAAGACCCCACCCCATCAGGGCCAGCAAGGGAGGACATGGTCCAGGGCGCTaGTCACTGCCACCTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RTQPPVLRPHPIRASKGGHGPGR*SLPPSC Trigger: GCAGGAAGGTGGCAGTGACCAGCGCCCTGGACCATG...TCCTCCCTTGCTGGCCCTGATGGGGTGGGGTCTTAGGACGGGAGGCTGTGTCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | GTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCATGCCGGCGGGGACCCTaGGACGCACACAGCGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: VFIEGPLQPGPVLGTAHPCRRGP*DAHSVV Trigger: CACAACGCTGTGTGCGTCCCAGGGTCCCCGCCGGCA...TGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | CAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACAGAACGCAGAGCCCCTaGGGCCTGGGGAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QVFIEGPLQPGPVLGTAHRTQSP*GLGSSW Trigger: CCAGGAGCTCCCCAGGCCGCAGGGGCTCTGCGTTCT...GTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | CGGACACAGCCTCCCGTCCTAAGACCCCACCCCATCAGGGCCAGCAAGGGAGGACTCAGCTGCCAGATGTaGAGTCCAAGCTGGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: RTQPPVLRPHPIRASKGGLSCQM*SPSWAE Trigger: CTCGGCCCAGCTTGGACTGCACATCTGGCAGCTGAG...TCCTCCCTTGCTGGCCCTGATGGGGTGGGGTCTTAGGACGGGAGGCTGTGTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | GGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCACGGACACAGCCTCAGTGGAATTCAGGCTaGACACACATGCAGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GPLQPGPVLGTAHPRTQPQWNSG*THMQSH Trigger: GTGGGACTGCATGTGTGTCCAGCCTGAATTCCACTG...AGGCTGTGTCCGTGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | GTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCATTGCAGTGGCCTTCGTaGCCCCCGGAGAAGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: VFIEGPLQPGPVLGTAHPLQWPS*PPEKVP Trigger: GGGGACCTTCTCCGGGGGCCACGAAGGCCACTGCAA...TGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | AAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCACGGACACAGCACGCACACAGCGTTGTaGGTCTTGTTCCCAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KVPCSRVPCWALHTHGHSTHTAL*VLFPGN Trigger: GTTCCCTGGGAACAAGACCCACAACGCTGTGTGCGT...GCTGTGTCCGTGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | ACAGCCTCCCGTCCTAAGACCCCACCCCATCAGGGCCAGCAAGGGAGGAAGGGGATGTGCAGTCCAAGCTaGGCCGAGGTCAGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TASRPKTPPHQGQQGRKGMCSPS*AEVRRR Trigger: CCTCCTCCTGACCTCGGCCCAGCTTGGACTGCACAT...CCCCTTCCTCCCTTGCTGGCCCTGATGGGGTGGGGTCTTAGGACGGGAGGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | AAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCGGGGGACAAGGGTGGTaGCGGCAGGTCGTGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: KCLLKVPCSRVPCWALHTGGQGW*RQVVQQ Trigger: TTGCTGCACGACCTGCCGGCACCACCCTTGTCCCCC...GGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | TCACTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCAAGAACGCAGAGCCCCTaGGGCCTGGGGAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SLDKCLLKVPCSRVPCWARTQSP*GLGSSW Trigger: CCAGGAGCTCCCCAGGCCGCAGGGGCTCTGCGTTCT...TGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | TCACTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACCTGGGGGACAAGGGTaGTGCCGGCAGGTCGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLDKCLLKVPCSRVPCWAPGGQG*CRQVVQ Trigger: CTGCACGACCTGCCGGCACCACCCTTGTCCCCCAGG...TGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | GGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCATGGGACTGTACCCCCTaGCCTGGGGGACAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQVFIEGPLQPGPVLGTAWDCTP*PGGQGW Trigger: CCACCCTTGTCCCCCAGGCCAGGGGGTACAGTCCCA...TGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | GTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCAGGAACTGGCAGCTTCTaGCGTCTTCGGTCGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VFIEGPLQPGPVLGTAHPGTGSF*RLRSTA Trigger: CGCCGTCGACCGAAGACGCCAGAAGCTGCCAGTTCC...TGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | TCACTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCATCCTGCACCCACTTCTaGTGCCAGGGGAGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLDKCLLKVPCSRVPCWASCTHF*CQGSRA Trigger: GGCCCTGCTCCCCTGGCAGCAGAAGTGGGTGCAGGA...TGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | ACTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTTCCTGCACCCACTTCTaGTGCCAGGGGAGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGQVFIEGPLQPGPVLGTSCTHF*CQGSRA Trigger: GGCCCTGCTCCCCTGGCAGCAGAAGTGGGTGCAGGA...AGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | GGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCAGGAACTGGCAGCTTCTaGCGTCTTCGGTCGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GQVFIEGPLQPGPVLGTAGTGSF*RLRSTA Trigger: CGCCGTCGACCGAAGACGCCAGAAGCTGCCAGTTCC...TGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | CGGACACAGCCTCCCGTCCTAAGACCCCACCCCATCAGGGCCAGCAAGGGAGGAGAAACCCGAACTGGGTaGAGTCTGTCCAAGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTQPPVLRPHPIRASKGGETRTG*SLSKVC Trigger: GCAAACCTTGGACAGACTGCACCCAGTTCGGGTTTC...TCCTCCCTTGCTGGCCCTGATGGGGTGGGGTCTTAGGACGGGAGGCTGTGTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | AAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCCCCGTGCTGTGCCATaGTCGGGTTTCAAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KCLLKVPCSRVPCWALHTPRAVP*SGFKSP Trigger: TGGGCTCTTGAAACCCGAGCATGGCACAGCACGGGG...GGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | CTCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCAGCACAGTCGATACACTaGAAGCCAAAACTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQGPAAAAELHGPGRWSAQSIH*KPKLNF Trigger: GAAATTCAGTTTTGGCTTCCAGTGTATCGACTGTGC...TGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379268.7 |
||
| CDS-3UTR CCA 90 bp | ACTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGTCCAAGGTTTGCAGTaGCCTTCGTGGCCCCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGQVFIEGPLQPGPVLGTVQGLQ*PSWPPE Trigger: CTCCGGGGGCCACGAAGGCCACTGCAAACCTTGGAC...AGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | GTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCATCTTCCTCGGGGAACTaGCAGCTTCTGGCGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VFIEGPLQPGPVLGTAHPSSSGN*QLLASS Trigger: CGAAGACGCCAGAAGCTGCCAGTTCCCCGAGGAAGA...TGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
||
| CDS-3UTR CCA 90 bp | TCACTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACATGGTCCAGGGCGCTaGTCACTGCCACCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLDKCLLKVPCSRVPCWAHGPGR*SLPPSC Trigger: GCAGGAAGGTGGCAGTGACCAGCGCCCTGGACCATG...TGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | CTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCAGGCTGGACACACATaGAGTCCCACTCGGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDKCLLKVPCSRVPCWALQAGHT*SPTRNS Trigger: GCTGTTCCGAGTGGGACTGCATGTGTGTCCAGCCTG...CAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | CAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACAGTCTGTCCAAGGTTTaGAGTGGCCTTCGTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVFIEGPLQPGPVLGTAHSLSKV*SGLRGP Trigger: GGGGCCACGAAGGCCACTGCAAACCTTGGACAGACT...GTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR GCA 90 bp | ACTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTCAGGCTGGACACACATaGAGTCCCACTCGGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGQVFIEGPLQPGPVLGTQAGHT*SPTRNS Trigger: GCTGTTCCGAGTGGGACTGCATGTGTGTCCAGCCTG...AGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
||
| CDS-3UTR CCA 90 bp | GGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACAAGGGTCTCCGCAGTaGAATTCAGGCTGGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: GQVFIEGPLQPGPVLGTAQGSPQ*NSGWTH Trigger: GTGTGTCCAGCCTGAATTCCACTGCGGAGACCCTTG...TGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | GTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACCCAAAACTGAATTTCCCCTaGGACTGTACCCCCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFIEGPLQPGPVLGTAHPKLNFP*DCTPWP Trigger: AGGCCAGGGGGTACAGTCCCAGGGGAAATTCAGTTT...TGGGTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | TCACTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCATCTTCCTCGGGGAACTaGCAGCTTCTGGCGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLDKCLLKVPCSRVPCWASSSGN*QLLASS Trigger: CGAAGACGCCAGAAGCTGCCAGTTCCCCGAGGAAGA...TGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | CTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGAAACTGAATTTCCCCTaGGACTGTACCCCCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDKCLLKVPCSRVPCWALKLNFP*DCTPWP Trigger: AGGCCAGGGGGTACAGTCCCAGGGGAAATTCAGTTT...CAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | TCACTGGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACAGTGGAATTCAGGCTaGACACACATGCAGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLDKCLLKVPCSRVPCWAQWNSG*THMQSH Trigger: GTGGGACTGCATGTGTGTCCAGCCTGAATTCCACTG...TGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR TCA 90 bp | GGACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCAACTGGAAGCCAAAACTaGATTTCCCCTGGGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GQVFIEGPLQPGPVLGTATGSQN*ISPGTV Trigger: TACAGTCCCAGGGGAAATTCAGTTTTGGCTTCCAGT...TGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS-3UTR CCA 90 bp | CAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACACGCACAGTCGATACACTaGAAGCCAAAACTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVFIEGPLQPGPVLGTAHAQSIH*KPKLNF Trigger: GAAATTCAGTTTTGGCTTCCAGTGTATCGACTGTGC...GTGTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS TCA 90 bp | GCCCAGGGCCGCACCCGGGACCCCCGGTGGGGCGCTGACCCAGGCTaGGCGCGCACAGCAGCGCCAGGCCGCACAGGGCCCGAAACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AQGRTRDPRWGADPG*ARTAAPGRTGPETR Trigger: GCGCGTTTCGGGCCCTGTGCGGCCTGGCGCTGCTGTGCGCGCTCAGCCTGGGTCAGCGCCCCACCGGGGGTCCCGGGTGCGGCCCTGGGC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000328596.10 ENST00000379265.5 ENST00000379268.7 |
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| CDS GCA 90 bp | GGCGGCCACGGCCAGGAGGACGACGGTCAGCCACCCAAGCGGCTCTaGCGGCGGGGACCCTGGGACGCACACAGCGTTGTGGGTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGHGQEDDGQPPKRL*RRGPWDAHSVVGLV Trigger: AACAAGACCCACAACGCTGTGTGCGTCCCAGGGTCCCCGCCGGCAGAGCCGCTTGGGTGGCTGACCGTCGTCCTCCTGGCCGTGGCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS-3UTR CAA 90 bp | GCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCACTGCCGGGACGCACACAGCGTaGTGGGTCTTGTTCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGPSRGRRTAWSRALVTAGTHTA*WVLFPG Trigger: CCCTGGGAACAAGACCCACAACGCTGTGTGCGTCCC...GGCAGTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS-3UTR CAA 90 bp | TCCCTCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGCAGTCTGTCCAAGGTTaGCAGTGGCCTTCGTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLQGPAAAAELHGPGRWQSVQG*QWPSWP Trigger: GGGCCACGAAGGCCACTGCAAACCTTGGACAGACTG...CCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGAGGGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS CCA 90 bp | CCCTTCTCCTCTGCCGATCGCTCGCCCCGCTCTTCCTCGGGGAACTaGCAGCTTCTGGCGTCTTCGGTCGACGGCGGCACCTCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PFSSADRSPRSSSGN*QLLASSVDGGTSSS Trigger: GCTGCTGGAGGTGCCGCCGTCGACCGAAGACGCCAGAAGCTGCCAGTTCCCCGAGGAAGAGCGGGGCGAGCGATCGGCAGAGGAGAAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000328596.10 ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CCA 90 bp | CTGCCGATCGCTCGCCCCGCTCTTCCTCGGGGAACTGGCAGCTTCTaGCGTCTTCGGTCGACGGCGGCACCTCCAGCAGCAGCTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPIARPALPRGTGSF*RLRSTAAPPAAAGS Trigger: AGACCCAGCTGCTGCTGGAGGTGCCGCCGTCGACCGAAGACGCCAGAAGCTGCCAGTTCCCCGAGGAAGAGCGGGGCGAGCGATCGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CCA 90 bp | CTGCCGATCGCTCGCCCCGCTCTTCCTCGGGGAACTGGCAGCTTCTaGCGTCTTCGGTCGACGGCGGCACCTCCAGCAGCAGTCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPIARPALPRGTGSF*RLRSTAAPPAAVCP Trigger: TGGACAGACTGCTGCTGGAGGTGCCGCCGTCGACCGAAGACGCCAGAAGCTGCCAGTTCCCCGAGGAAGAGCGGGGCGAGCGATCGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328596.10 |
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| CDS CCA 90 bp | GAGGACGACGGTCAGCCACCCAAGCGGCTCTGCCGGCGGGGACCCTaGGACGCACACAGCGTTGTGGGTCTTGTTCCCAGGGAACACAGT | + |
|
Preference number: 5 (lower is better) Translates to: EDDGQPPKRLCRRGP*DAHSVVGLVPREHS Trigger: ACTGTGTTCCCTGGGAACAAGACCCACAACGCTGTGTGCGTCCCAGGGTCCCCGCCGGCAGAGCCGCTTGGGTGGCTGACCGTCGTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS-3UTR CAA 90 bp | TCCTGCAGGGCCCAGCCGCGGCCGCCGAACTGCATGGTCCAGGGCGCTGGTCACACAGCGTTGTGGGTCTaGTTCCCAGGGAACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SCRAQPRPPNCMVQGAGHTALWV*FPGNTV Trigger: CACTGTGTTCCCTGGGAACAAGACCCACAACGCTGT...GTGACCAGCGCCCTGGACCATGCAGTTCGGCGGCCGCGGCTGGGCCCTGCAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379268.7 |
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| CDS GCA 90 bp | ACTGTACCCCCTGGCCTGGGGGACAAGGGTGGTGCCGGCAGGTCGTaGAGCAAGGGTCTCCGCAGTGGAATTCAGGCTGGACACACATGC | + |
|
Preference number: 5 (lower is better) Translates to: TVPPGLGDKGGAGRS*SKGLRSGIQAGHTC Trigger: GCATGTGTGTCCAGCCTGAATTCCACTGCGGAGACCCTTGCTGCACGACCTGCCGGCACCACCCTTGTCCCCCAGGCCAGGGGGTACAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000328596.10 ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CCA 90 bp | TGCCGGCAGGTCGTGCAGCAAGGGTCTCCGCAGTGGAATTCAGGCTaGACACACATGCAGTCCCACTCGGAACAGCACTCCTCGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CRQVVQQGSPQWNSG*THMQSHSEQHSSPG Trigger: CCCGGGCGAGGAGTGCTGTTCCGAGTGGGACTGCATGTGTGTCCAGCCTGAATTCCACTGCGGAGACCCTTGCTGCACGACCTGCCGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000328596.10 ENST00000379265.5 ENST00000379268.7 |
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| CDS CCA 90 bp | CGGCACCTCCAGCAGCAGTCTGTCCAAGGTTTGCAGTGGCCTTCGTaGCCCCCGGAGAAGGTCCCCGAGGCACAGTCGATACACTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RHLQQQSVQGLQWPS*PPEKVPEAQSIHWK Trigger: CTTCCAGTGTATCGACTGTGCCTCGGGGACCTTCTCCGGGGGCCACGAAGGCCACTGCAAACCTTGGACAGACTGCTGCTGGAGGTGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328596.10 |
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| CDS CCA 90 bp | TGCCGGCAGGTCGTGCAGCAAGGGTCTCCGCAGTGGAATTCAGGCTaGACACACATGCAGTCCCACTCGGAACAGCACTCCTCGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CRQVVQQGSPQWNSG*THMQSHSEQHSSPG Trigger: CCCAGGCGAGGAGTGCTGTTCCGAGTGGGACTGCATGTGTGTCCAGCCTGAATTCCACTGCGGAGACCCTTGCTGCACGACCTGCCGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486728.5 |
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| CDS GCA 90 bp | TCGTGCAGCAAGGGTCTCCGCAGTGGAATTCAGGCTGGACACACATaGAGTCCCACTCGGAACAGCACTCCTCGCCCGGGTAATCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCSKGLRSGIQAGHT*SPTRNSTPRPGNRG Trigger: GCCGCGATTACCCGGGCGAGGAGTGCTGTTCCGAGTGGGACTGCATGTGTGTCCAGCCTGAATTCCACTGCGGAGACCCTTGCTGCACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000328596.10 ENST00000379265.5 ENST00000379268.7 |
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| CDS GCA 90 bp | TCGTGCAGCAAGGGTCTCCGCAGTGGAATTCAGGCTGGACACACATaGAGTCCCACTCGGAACAGCACTCCTCGCCTGGGCAGGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: SCSKGLRSGIQAGHT*SPTRNSTPRLGRRQ Trigger: CTGTCTCCTGCCCAGGCGAGGAGTGCTGTTCCGAGTGGGACTGCATGTGTGTCCAGCCTGAATTCCACTGCGGAGACCCTTGCTGCACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486728.5 |
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| CDS CCA 90 bp | AACCCGAACTGGGTGCAGTCTGTCCAAGGTTTGCAGTGGCCTTCGTaGCCCCCGGAGAAGGTCCCCGAGGCACAGTCGATACACTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NPNWVQSVQGLQWPS*PPEKVPEAQSIHWK Trigger: CTTCCAGTGTATCGACTGTGCCTCGGGGACCTTCTCCGGGGGCCACGAAGGCCACTGCAAACCTTGGACAGACTGCACCCAGTTCGGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS-3UTR CAA 90 bp | GACAAGTGTTTATTGAAGGTCCCCTGCAGCCGGGTCCCGTGCTGGGCACTGCACCAGTCTGTCCAAGGTTaGCAGTGGCCTTCGTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DKCLLKVPCSRVPCWALHQSVQG*QWPSWP Trigger: GGGCCACGAAGGCCACTGCAAACCTTGGACAGACTG...GTGCAGTGCCCAGCACGGGACCCGGCTGCAGGGGACCTTCAATAAACACTTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328596.10 ENST00000379268.7 |
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| CDS TCA 90 bp | CTGGGACGCACACAGCGTTGTGGGTCTTGTTCCCAGGGAACACAGTaGGAAACCCGAACTGGGTGCAGTCTGTCCAAGGTTTGCAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGRTQRCGSCSQGTQ*ETRTGCSLSKVCSG Trigger: GCCACTGCAAACCTTGGACAGACTGCACCCAGTTCGGGTTTCTCACTGTGTTCCCTGGGAACAAGACCCACAACGCTGTGTGCGTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
||
| CDS GCA 72 bp | GGCCAGGAGGACGACGGTCAGCCACCCAAGCGGCTCTaGCGGCGGGGACCCTGGGACGCACACAGCGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GQEDDGQPPKRL*RRGPWDAHSVV Trigger: CACAACGCTGTGTGCGTCCCAGGGTCCCCGCCGGCAGAGCCGCTTGGGTGGCTGACCGTCGTCCTCCTGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS GCA 72 bp | TGGGACTGTACCCCCTGGCCTGGGGGACAAGGGTGGTaGCGGCAGGTCGTGCAGCAAGGGTCTCCGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WDCTPWPGGQGW*RQVVQQGSPQW Trigger: CCACTGCGGAGACCCTTGCTGCACGACCTGCCGGCACCACCCTTGTCCCCCAGGCCAGGGGGTACAGTCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000328596.10 ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CCA 72 bp | GCTCGCCCCGCTCTTCCTCGGGGAACTGGCAGCTTCTaGCGTCTTCGGTCGACGGCGGCACCTCCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARPALPRGTGSF*RLRSTAAPPAA Trigger: TGCTGCTGGAGGTGCCGCCGTCGACCGAAGACGCCAGAAGCTGCCAGTTCCCCGAGGAAGAGCGGGGCGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000328596.10 ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CCA 72 bp | TCTGCCGATCGCTCGCCCCGCTCTTCCTCGGGGAACTaGCAGCTTCTGGCGTCTTCGGTCGACGGCGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SADRSPRSSSGN*QLLASSVDGGT Trigger: GGTGCCGCCGTCGACCGAAGACGCCAGAAGCTGCCAGTTCCCCGAGGAAGAGCGGGGCGAGCGATCGGCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000328596.10 ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CCA 72 bp | GGTCAGCCACCCAAGCGGCTCTGCCGGCGGGGACCCTaGGACGCACACAGCGTTGTGGGTCTTGTTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GQPPKRLCRRGP*DAHSVVGLVPR Trigger: CCTGGGAACAAGACCCACAACGCTGTGTGCGTCCCAGGGTCCCCGCCGGCAGAGCCGCTTGGGTGGCTGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
||
| CDS GCA 72 bp | GACGGCGGCACCTCCAGCAGCAGTCTGTCCAAGGTTTaGAGTGGCCTTCGTGGCCCCCGGAGAAGGTCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: DGGTSSSSLSKV*SGLRGPRRRSP Trigger: CGGGGACCTTCTCCGGGGGCCACGAAGGCCACTGCAAACCTTGGACAGACTGCTGCTGGAGGTGCCGCCGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328596.10 |
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| CDS CAA 72 bp | CGACGGCGGCACCTCCAGCAGCAGTCTGTCCAAGGTTaGCAGTGGCCTTCGTGGCCCCCGGAGAAGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: RRRHLQQQSVQG*QWPSWPPEKVP Trigger: GGGGACCTTCTCCGGGGGCCACGAAGGCCACTGCAAACCTTGGACAGACTGCTGCTGGAGGTGCCGCCGTCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000328596.10 |
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| CDS GCA 72 bp | CCTGGCCTGGGGGACAAGGGTGGTGCCGGCAGGTCGTaGAGCAAGGGTCTCCGCAGTGGAATTCAGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PGLGDKGGAGRS*SKGLRSGIQAG Trigger: TCCAGCCTGAATTCCACTGCGGAGACCCTTGCTGCACGACCTGCCGGCACCACCCTTGTCCCCCAGGCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000328596.10 ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CCA 72 bp | CGGCACCTCCAGCAGCAGTCTGTCCAAGGTTTGCAGTaGCCTTCGTGGCCCCCGGAGAAGGTCCCCGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RHLQQQSVQGLQ*PSWPPEKVPEA Trigger: TGCCTCGGGGACCTTCTCCGGGGGCCACGAAGGCCACTGCAAACCTTGGACAGACTGCTGCTGGAGGTGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328596.10 |
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| CDS CCA 72 bp | AACCCGAACTGGGTGCAGTCTGTCCAAGGTTTGCAGTaGCCTTCGTGGCCCCCGGAGAAGGTCCCCGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: NPNWVQSVQGLQ*PSWPPEKVPEA Trigger: TGCCTCGGGGACCTTCTCCGGGGGCCACGAAGGCCACTGCAAACCTTGGACAGACTGCACCCAGTTCGGGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CCA 72 bp | TCTGCCGGCGGGGACCCTGGGACGCACACAGCGTTGTaGGTCTTGTTCCCAGGGAACACAGTGAGAAACCCG | + |
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Preference number: 6 (lower is better) Translates to: SAGGDPGTHTAL*VLFPGNTVRNP Trigger: CGGGTTTCTCACTGTGTTCCCTGGGAACAAGACCCACAACGCTGTGTGCGTCCCAGGGTCCCCGCCGGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CAA 72 bp | GGCTCTGCCGGCGGGGACCCTGGGACGCACACAGCGTaGTGGGTCTTGTTCCCAGGGAACACAGTGAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: GSAGGDPGTHTA*WVLFPGNTVRN Trigger: GTTTCTCACTGTGTTCCCTGGGAACAAGACCCACAACGCTGTGTGCGTCCCAGGGTCCCCGCCGGCAGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CAA 90 bp | GGCTCTGCCGGCGGGGACCCTGGGACGCACACAGCGTTGTGGGTCTaGTTCCCAGGGAACACAGTGAGAAACCCGAACTGGGTGCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: GSAGGDPGTHTALWV*FPGNTVRNPNWVQS Trigger: AGACTGCACCCAGTTCGGGTTTCTCACTGTGTTCCCTGGGAACAAGACCCACAACGCTGTGTGCGTCCCAGGGTCCCCGCCGGCAGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CCA 72 bp | CAGCAGCAGTCTGTCCAAGGTTTGCAGTGGCCTTCGTaGCCCCCGGAGAAGGTCCCCGAGGCACAGTCGATA | + |
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Preference number: 6 (lower is better) Translates to: QQQSVQGLQWPS*PPEKVPEAQSI Trigger: TATCGACTGTGCCTCGGGGACCTTCTCCGGGGGCCACGAAGGCCACTGCAAACCTTGGACAGACTGCTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328596.10 |
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| CDS CCA 72 bp | TGGGTGCAGTCTGTCCAAGGTTTGCAGTGGCCTTCGTaGCCCCCGGAGAAGGTCCCCGAGGCACAGTCGATA | + |
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Preference number: 6 (lower is better) Translates to: WVQSVQGLQWPS*PPEKVPEAQSI Trigger: TATCGACTGTGCCTCGGGGACCTTCTCCGGGGGCCACGAAGGCCACTGCAAACCTTGGACAGACTGCACCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CAA 72 bp | GTGAGAAACCCGAACTGGGTGCAGTCTGTCCAAGGTTaGCAGTGGCCTTCGTGGCCCCCGGAGAAGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VRNPNWVQSVQG*QWPSWPPEKVP Trigger: GGGGACCTTCTCCGGGGGCCACGAAGGCCACTGCAAACCTTGGACAGACTGCACCCAGTTCGGGTTTCTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS CAA 72 bp | GGCGGGGACCCTGGGACGCACACAGCGTTGTGGGTCTaGTTCCCAGGGAACACAGTGAGAAACCCGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: GGDPGTHTALWV*FPGNTVRNPNW Trigger: CCAGTTCGGGTTTCTCACTGTGTTCCCTGGGAACAAGACCCACAACGCTGTGTGCGTCCCAGGGTCCCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS GCA 72 bp | AAGGGTCTCCGCAGTGGAATTCAGGCTGGACACACATaGAGTCCCACTCGGAACAGCACTCCTCGCCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: KGLRSGIQAGHT*SPTRNSTPRPG Trigger: ACCCGGGCGAGGAGTGCTGTTCCGAGTGGGACTGCATGTGTGTCCAGCCTGAATTCCACTGCGGAGACCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000328596.10 ENST00000379265.5 ENST00000379268.7 |
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| CDS GCA 72 bp | AAGGGTCTCCGCAGTGGAATTCAGGCTGGACACACATaGAGTCCCACTCGGAACAGCACTCCTCGCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: KGLRSGIQAGHT*SPTRNSTPRLG Trigger: GCCCAGGCGAGGAGTGCTGTTCCGAGTGGGACTGCATGTGTGTCCAGCCTGAATTCCACTGCGGAGACCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486728.5 |
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| CDS CCA 72 bp | GTCGTGCAGCAAGGGTCTCCGCAGTGGAATTCAGGCTaGACACACATGCAGTCCCACTCGGAACAGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: VVQQGSPQWNSG*THMQSHSEQHS Trigger: GGAGTGCTGTTCCGAGTGGGACTGCATGTGTGTCCAGCCTGAATTCCACTGCGGAGACCCTTGCTGCACGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000328596.10 ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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| CDS TCA 72 bp | ACACAGCGTTGTGGGTCTTGTTCCCAGGGAACACAGTaGGAAACCCGAACTGGGTGCAGTCTGTCCAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: TQRCGSCSQGTQ*ETRTGCSLSKV Trigger: AACCTTGGACAGACTGCACCCAGTTCGGGTTTCTCACTGTGTTCCCTGGGAACAAGACCCACAACGCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379265.5 ENST00000379268.7 ENST00000486728.5 |
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