Pregenerated sensors for TNFRSF17 (Homo sapiens)
Ensembl gene IDs: ENSG00000048462Ensembl transcript IDs: ENST00000053243.6, ENST00000396495.3, ENST00000562385.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAGAGTTTAATCATGAAACCAAGGAAGTTTCTACCATTAAGCTCCCAACAGTACATCCTAAAGAGATCTaGCACATCATCTATTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: KEFNHETKEVSTIKLPTVHPKEI*HIIYSD Trigger: GTCAGAATAGATGATGTGTCAGATCTCTTTAGGATG...TACTGTTGGGAGCTTAATGGTAGAAACTTCCTTGGTTTCATGATTAAACTCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000053243.6 |
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| 3UTR-3UTR CCA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTAAAAGATTTTTAAAGTaGCACTGCTCGAGTCGAAAT | + |
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Preference number: 2 (lower is better) Translates to: LYRQLKNTVILKRSDTSSKRFLK*HCSSRN Trigger: ATTTCGACTCGAGCAGTGCCACTTTAAAAATCTTTT...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGTTTAATCATGAAACCAAGGAAGTTTCTACCATTAAGCTCCCAACAGTAAAAAGATTTTTAAAGTaGCACTGCTCGAGTCGAAAT | + |
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Preference number: 2 (lower is better) Translates to: KEFNHETKEVSTIKLPTVKRFLK*HCSSRN Trigger: ATTTCGACTCGAGCAGTGCCACTTTAAAAATCTTTT...TACTGTTGGGAGCTTAATGGTAGAAACTTCCTTGGTTTCATGATTAAACTCTTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000053243.6 |
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| CDS-3UTR TCA 90 bp | GCAGTCTTCACAGGTGCATTCTTCCACCGTGTACTCGAGGCCTCTCGGAAGAATCCTTCGGTTTGCTCTTaGTGCAGTCTTCACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: AVFTGAFFHRVLEASRKNPSVCS*CSLHRC Trigger: GCACCTGTGAAGACTGCATCAAGAGCAAACCGAAGG...ATTCTTCCGAGAGGCCTCGAGTACACGGTGGAAGAATGCACCTGTGAAGACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562385.1 |
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| CDS-3UTR TCA 90 bp | TACTCGAGGCCTCTCGGAAGAATAATTTCATCACCAGTCCTGCTCTTTTCCAGGGAGGCTGCAGTGAGTTaGGATCACGCCACTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: YSRPLGRIISSPVLLFSREAAVS*DHATAL Trigger: GAGTGCAGTGGCGTGATCTCAACTCACTGCAGCCTC...CCTGGAAAAGAGCAGGACTGGTGATGAAATTATTCTTCCGAGAGGCCTCGAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562385.1 |
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| CDS-3UTR GCA 90 bp | TGCAGTCTTCACAGGTGCATTCTTCCACCGTGTACTCGAGGCCTCTCGGAAGAATGCAGTCTTCACAGGTaGATTCTTCCACCGTGTACT | + |
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Preference number: 4 (lower is better) Translates to: CSLHRCILPPCTRGLSEECSLHR*ILPPCT Trigger: AGTACACGGTGGAAGAATGCACCTGTGAAGACTGCA...TTCTTCCGAGAGGCCTCGAGTACACGGTGGAAGAATGCACCTGTGAAGACTGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562385.1 |
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| CDS-3UTR GCA 90 bp | TCTTCACAGGTGCATTCTTCCACCGTGTACTCGAGGCCTCTCGGAAGAATAATTCCAAGAGGCAGAGGCTaGAGTGAGTTGAGATCACGC | + |
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Preference number: 4 (lower is better) Translates to: SSQVHSSTVYSRPLGRIIPRGRG*SELRSR Trigger: GCGTGATCTCAACTCACTGCAGCCTCTGCCTCTTGG...AATTATTCTTCCGAGAGGCCTCGAGTACACGGTGGAAGAATGCACCTGTGAAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562385.1 |
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| CDS-3UTR CCA 90 bp | TACTCGAGGCCTCTCGGAAGAATAATTTCATCACCAGTCCTGCTCTTTTCCAGGCTCAGGAGGCTGAGATaGGAGAATTGTTTGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: YSRPLGRIISSPVLLFSRLRRLR*ENCLNP Trigger: TGGGTTCAAACAATTCTCCCATCTCAGCCTCCTGAG...CCTGGAAAAGAGCAGGACTGGTGATGAAATTATTCTTCCGAGAGGCCTCGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562385.1 |
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| CDS-3UTR TCA 90 bp | CATTCTTCCACCGTGTACTCGAGGCCTCTCGGAAGAATAATTTCATCACCAGTCGAAGAACATCGAAGTTaGCAAGGTATGCAAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: HSSTVYSRPLGRIISSPVEEHRS*QGMQAC Trigger: GCATGCTTGCATACCTTGTCAACTTCGATGTTCTTC...GACTGGTGATGAAATTATTCTTCCGAGAGGCCTCGAGTACACGGTGGAAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562385.1 |
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| CDS-3UTR TCA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTCCTTCGGTTTGCTCTTaGTGCAGTCTTCACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LYRQLKNTVILKRSDTSSPSVCS*CSLHRC Trigger: GCACCTGTGAAGACTGCATCAAGAGCAAACCGAAGG...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | GTACTCGAGGCCTCTCGGAAGAATAATTTCATCACCAGTCCTGCTCTTTTCCAGGAAGTTGACAAGGTATaGAAGCATGCAACAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: VLEASRKNNFITSPALFQEVDKV*KHATNC Trigger: ACAGTTTGTTGCATGCTTGCATACCTTGTCAACTTC...CTGGAAAAGAGCAGGACTGGTGATGAAATTATTCTTCCGAGAGGCCTCGAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562385.1 |
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| CDS-3UTR GCA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTGGTGACAAGAATGGTTaGGCCTTCCTCCATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYRQLKNTVILKRSDTSSGDKNG*AFLHSW Trigger: CCAGCTATGGAGGAAGGCGCAACCATTCTTGTCACC...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR CCA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTGCCTTCCTCCATAGCTaGGAGTGGAAAGCAATGGTC | + |
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Preference number: 4 (lower is better) Translates to: LYRQLKNTVILKRSDTSSAFLHS*EWKAMV Trigger: GACCATTGCTTTCCACTCCCAGCTATGGAGGAAGGC...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTTCATTTTGGGAGCACTaGCCAGCCATCTGCAACATG | + |
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Preference number: 4 (lower is better) Translates to: LYRQLKNTVILKRSDTSSSFWEH*PAICNM Trigger: CATGTTGCAGATGGCTGGGCAGTGCTCCCAAAATGA...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCATTTTGGGAGCACTaGCCAGCCATCTGCAACATG | + |
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Preference number: 4 (lower is better) Translates to: KLYRQLKNTVILKRSDTSSFWEH*PAICNM Trigger: CATGTTGCAGATGGCTGGGCAGTGCTCCCAAAATGA...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR CCA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCAAGCACTCAAAGCAGCTaGCAGGCTCTTGCAATAGTC | + |
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Preference number: 4 (lower is better) Translates to: KLYRQLKNTVILKRSDTSSTQSS*QALAIV Trigger: GACTATTGCAAGAGCCTGCCAGCTGCTTTGAGTGCT...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR TCA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTCATGCCCAGGAGACCTaGTCCTGTGTTTTTAAACTC | + |
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Preference number: 4 (lower is better) Translates to: LYRQLKNTVILKRSDTSSHAQET*SCVFKL Trigger: GAGTTTAAAAACACAGGATCAGGTCTCCTGGGCATG...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000053243.6 |
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| CDS-3UTR TCA 90 bp | TATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTATTCCTTCGGTTTGCTCTTaGTGCAGTCTTCACAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: YRQLKNTVILKRSDTSSIPSVCS*CSLHRC Trigger: GCACCTGTGAAGACTGCATCAAGAGCAAACCGAAGG...AATAGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR TCA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCACATTCGTTTTCGTGGTaGCAAGAATGGTTGCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KLYRQLKNTVILKRSDTSHSFSW*QEWLRL Trigger: AAGGCGCAACCATTCTTGTCACCACGAAAACGAATG...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR TCA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTCATGCCCAGGAGACCTaGTCTTGCATTACAATAACG | + |
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Preference number: 4 (lower is better) Translates to: LYRQLKNTVILKRSDTSSHAQET*SCITIT Trigger: CGTTATTGTAATGCAAGATCAGGTCTCCTGGGCATG...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATGCAGTCTTCACAGGTaGATTCTTCCACCGTGTACT | + |
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Preference number: 4 (lower is better) Translates to: KLYRQLKNTVILKRSDTSCSLHR*ILPPCT Trigger: AGTACACGGTGGAAGAATGCACCTGTGAAGACTGCA...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | TATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTATTGGTGACAAGAATGGTTaGGCCTTCCTCCATAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: YRQLKNTVILKRSDTSSIGDKNG*AFLHSW Trigger: CCAGCTATGGAGGAAGGCGCAACCATTCTTGTCACC...AATAGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTCAGCTGGCAGGCTCTTaGAATAGTCATTCGTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: LYRQLKNTVILKRSDTSSQLAGS*NSHSFS Trigger: CGAAAACGAATGACTATTGCAAGAGCCTGCCAGCTG...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR TCA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCAGAAGAACATCGAAGTTaGCAAGGTATGCAAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: KLYRQLKNTVILKRSDTSEEHRS*QGMQAC Trigger: GCATGCTTGCATACCTTGTCAACTTCGATGTTCTTC...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCACACTGCCCAGCCATCTaGAACATGATCACAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: KLYRQLKNTVILKRSDTSHCPAI*NMITKR Trigger: TCTTTTTGTGATCATGTTGCAGATGGCTGGGCAGTG...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR TCA 90 bp | TATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTATTCATTCGTTTTCGTGGTaGCAAGAATGGTTGCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: YRQLKNTVILKRSDTSSIHSFSW*QEWLRL Trigger: AAGGCGCAACCATTCTTGTCACCACGAAAACGAATG...AATAGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | TATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTATTTGCAGTCTTCACAGGTaGATTCTTCCACCGTGTACT | + |
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Preference number: 4 (lower is better) Translates to: YRQLKNTVILKRSDTSSICSLHR*ILPPCT Trigger: AGTACACGGTGGAAGAATGCACCTGTGAAGACTGCA...AATAGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | TATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTATTCAGCTGGCAGGCTCTTaGAATAGTCATTCGTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: YRQLKNTVILKRSDTSSIQLAGS*NSHSFS Trigger: CGAAAACGAATGACTATTGCAAGAGCCTGCCAGCTG...AATAGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR TCA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCACAGCCATCTGCAACATaGTCACAAAAAGAAAACAAG | + |
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Preference number: 4 (lower is better) Translates to: KLYRQLKNTVILKRSDTSQPSAT*SQKENK Trigger: CTTGTTTTCTTTTTGTGATCATGTTGCAGATGGCTG...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR TCA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTCAGCCATCTGCAACATaGTCACAAAAAGAAAACAAG | + |
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Preference number: 4 (lower is better) Translates to: LYRQLKNTVILKRSDTSSQPSAT*SQKENK Trigger: CTTGTTTTCTTTTTGTGATCATGTTGCAGATGGCTG...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR TCA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTATTCGTTCCTTTCACTaGATTGGTCACACTTGCATT | + |
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Preference number: 4 (lower is better) Translates to: LYRQLKNTVILKRSDTSSIRSFH*IGHTCI Trigger: AATGCAAGTGTGACCAATTCAGTGAAAGGAACGAAT...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000053243.6 |
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| CDS-3UTR TCA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCACATCCTAAAGAGATCTaGCACATCATCTATTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: KLYRQLKNTVILKRSDTSHPKEI*HIIYSD Trigger: GTCAGAATAGATGATGTGTCAGATCTCTTTAGGATG...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | TATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTATTCACTGCCCAGCCATCTaGAACATGATCACAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: YRQLKNTVILKRSDTSSIHCPAI*NMITKR Trigger: TCTTTTTGTGATCATGTTGCAGATGGCTGGGCAGTG...AATAGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTGAAGTTGACAAGGTATaGAAGCATGCAACAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: LYRQLKNTVILKRSDTSSEVDKV*KHATNC Trigger: ACAGTTTGTTGCATGCTTGCATACCTTGTCAACTTC...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | AAAGAGTTTAATCATGAAACCAAGGAAGTTTCTACCATTAAGCTCCCAACAGTAGAAGTTGACAAGGTATaGAAGCATGCAACAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: KEFNHETKEVSTIKLPTVEVDKV*KHATNC Trigger: ACAGTTTGTTGCATGCTTGCATACCTTGTCAACTTC...TACTGTTGGGAGCTTAATGGTAGAAACTTCCTTGGTTTCATGATTAAACTCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000053243.6 |
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| CDS-3UTR CCA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCAAAAAGATTTTTAAAGTaGCACTGCTCGAGTCGAAAT | + |
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Preference number: 4 (lower is better) Translates to: KLYRQLKNTVILKRSDTSKRFLK*HCSSRN Trigger: ATTTCGACTCGAGCAGTGCCACTTTAAAAATCTTTT...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR GCA 90 bp | AAAGAGTTTAATCATGAAACCAAGGAAGTTTCTACCATTAAGCTCCCAACAGTACAAGGTATGCAAGCATaGAACAAACTGTCAAAATAT | + |
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Preference number: 4 (lower is better) Translates to: KEFNHETKEVSTIKLPTVQGMQA*NKLSKY Trigger: ATATTTTGACAGTTTGTTGCATGCTTGCATACCTTG...TACTGTTGGGAGCTTAATGGTAGAAACTTCCTTGGTTTCATGATTAAACTCTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000053243.6 |
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| CDS-3UTR CAA 90 bp | GCAGTCTTCACAGGTGCATTCTTCCACCGTGTACTCGAGGCCTCTCGGAAGAATAGAGGCTGCAGTGAGTaGAGATCACGCCACTGCACT | + |
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Preference number: 5 (lower is better) Translates to: AVFTGAFFHRVLEASRKNRGCSE*RSRHCT Trigger: AGTGCAGTGGCGTGATCTCAACTCACTGCAGCCTCT...ATTCTTCCGAGAGGCCTCGAGTACACGGTGGAAGAATGCACCTGTGAAGACTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562385.1 |
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| CDS TCA 90 bp | CTGGGAGTGGAAAGCAATGGTCAGAGTCGACCTTCGGTTTGCTCTTaGTGCAGTCTTCACAGGTGCATTCTTCCACCGTGTACTCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: LGVESNGQSRPSVCS*CSLHRCILPPCTRG Trigger: GCCTCGAGTACACGGTGGAAGAATGCACCTGTGAAGACTGCATCAAGAGCAAACCGAAGGTCGACTCTGACCATTGCTTTCCACTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS CCA 90 bp | ACAAGAATGGTTGCGCCTTCCTCCATAGCTGGGAGTGGAAAGCAATaGTCAGAGTCGACCTTCGGTTTGCTCTTGATGCAGTCTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: TRMVAPSSIAGSGKQ*SESTFGLLLMQSSQ Trigger: CTGTGAAGACTGCATCAAGAGCAAACCGAAGGTCGACTCTGACCATTGCTTTCCACTCCCAGCTATGGAGGAAGGCGCAACCATTCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS CCA 90 bp | TTTCGTGGTGACAAGAATGGTTGCGCCTTCCTCCATAGCTGGGAGTaGAAAGCAATGGTCAGAGTCGACCTTCGGTTTGCTCTTGATGCA | + |
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Preference number: 5 (lower is better) Translates to: FRGDKNGCAFLHSWE*KAMVRVDLRFALDA Trigger: TGCATCAAGAGCAAACCGAAGGTCGACTCTGACCATTGCTTTCCACTCCCAGCTATGGAGGAAGGCGCAACCATTCTTGTCACCACGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS GCA 90 bp | CAGGCTCTTGCAATAGTCATTCGTTTTCGTGGTGACAAGAATGGTTaGGCCTTCCTCCATAGCTGGGAGTGGAAAGCAATGGTCAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: QALAIVIRFRGDKNG*AFLHSWEWKAMVRV Trigger: GACTCTGACCATTGCTTTCCACTCCCAGCTATGGAGGAAGGCGCAACCATTCTTGTCACCACGAAAACGAATGACTATTGCAAGAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS CCA 90 bp | ATTCGTTTTCGTGGTGACAAGAATGGTTGCGCCTTCCTCCATAGCTaGGAGTGGAAAGCAATGGTCAGAGTCGACCTTCGGTTTGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: IRFRGDKNGCAFLHS*EWKAMVRVDLRFAL Trigger: AAGAGCAAACCGAAGGTCGACTCTGACCATTGCTTTCCACTCCCAGCTATGGAGGAAGGCGCAACCATTCTTGTCACCACGAAAACGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR CAA 90 bp | GCAGTCTTCACAGGTGCATTCTTCCACCGTGTACTCGAGGCCTCTCGGAAGAATAGAAGAACATCGAAGTaGACAAGGTATGCAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: AVFTGAFFHRVLEASRKNRRTSK*TRYASM Trigger: CATGCTTGCATACCTTGTCAACTTCGATGTTCTTCT...ATTCTTCCGAGAGGCCTCGAGTACACGGTGGAAGAATGCACCTGTGAAGACTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562385.1 |
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| CDS-3UTR CAA 90 bp | GTCTTCACAGGTGCATTCTTCCACCGTGTACTCGAGGCCTCTCGGAAGAATAATCTGAATTGGTCACACTaGCATTACAATAACGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: VFTGAFFHRVLEASRKNNLNWSH*HYNNAD Trigger: GTCAGCGTTATTGTAATGCAAGTGTGACCAATTCAG...ATTATTCTTCCGAGAGGCCTCGAGTACACGGTGGAAGAATGCACCTGTGAAGAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562385.1 |
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| CDS-3UTR CAA 90 bp | CATTCTTCCACCGTGTACTCGAGGCCTCTCGGAAGAATAATTTCATCACCAGTCGTTCCTTTCACTGAATaGGTCACACTTGCATTACAA | + |
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Preference number: 5 (lower is better) Translates to: HSSTVYSRPLGRIISSPVVPFTE*VTLALQ Trigger: TTGTAATGCAAGTGTGACCAATTCAGTGAAAGGAAC...GACTGGTGATGAAATTATTCTTCCGAGAGGCCTCGAGTACACGGTGGAAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562385.1 |
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| CDS-3UTR CAA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCAACCTTCGGTTTGCTCTaGATGCAGTCTTCACAGGTG | + |
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Preference number: 5 (lower is better) Translates to: KLYRQLKNTVILKRSDTSTFGLL*MQSSQV Trigger: CACCTGTGAAGACTGCATCAAGAGCAAACCGAAGGT...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR CAA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTGAGTCGACCTTCGGTTaGCTCTTGATGCAGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LYRQLKNTVILKRSDTSSESTFG*LLMQSS Trigger: TGAAGACTGCATCAAGAGCAAACCGAAGGTCGACTC...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR CAA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTCCAGGAGACCTGATCTaGCATTACAATAACGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: LYRQLKNTVILKRSDTSSPGDLI*HYNNAD Trigger: GTCAGCGTTATTGTAATGCAAGATCAGGTCTCCTGG...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396495.3 |
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| CDS-3UTR CAA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCAGTCAAAATATTCATTTaGGGAGCACTGCCCAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: KLYRQLKNTVILKRSDTSVKIFI*GALPSH Trigger: ATGGCTGGGCAGTGCTCCCAAAATGAATATTTTGAC...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR CAA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTGTCAAAATATTCATTTaGGGAGCACTGCCCAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: LYRQLKNTVILKRSDTSSVKIFI*GALPSH Trigger: ATGGCTGGGCAGTGCTCCCAAAATGAATATTTTGAC...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR CAA 90 bp | TATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTATTACCTTCGGTTTGCTCTaGATGCAGTCTTCACAGGTG | + |
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Preference number: 5 (lower is better) Translates to: YRQLKNTVILKRSDTSSITFGLL*MQSSQV Trigger: CACCTGTGAAGACTGCATCAAGAGCAAACCGAAGGT...AATAGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR CAA 90 bp | TATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTATTGAGTCGACCTTCGGTTaGCTCTTGATGCAGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: YRQLKNTVILKRSDTSSIESTFG*LLMQSS Trigger: TGAAGACTGCATCAAGAGCAAACCGAAGGTCGACTC...AATAGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR CAA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCAAGAAGAACATCGAAGTaGACAAGGTATGCAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: KLYRQLKNTVILKRSDTSRRTSK*TRYASM Trigger: CATGCTTGCATACCTTGTCAACTTCGATGTTCTTCT...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR CAA 90 bp | CTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTAGAAGAACATCGAAGTaGACAAGGTATGCAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: LYRQLKNTVILKRSDTSSRRTSK*TRYASM Trigger: CATGCTTGCATACCTTGTCAACTTCGATGTTCTTCT...AGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS-3UTR CAA 90 bp | AAGCTGTATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCAGTTCCTTTCACTGAATaGGTCACACTTGCATTACAA | + |
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Preference number: 5 (lower is better) Translates to: KLYRQLKNTVILKRSDTSVPFTE*VTLALQ Trigger: TTGTAATGCAAGTGTGACCAATTCAGTGAAAGGAAC...TGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATACAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000053243.6 |
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| CDS-3UTR CAA 90 bp | TATCGGCAACTGAAAAATACAGTCATCCTAAAGAGATCTGACACATCATCTATTCTGAATTGGTCACACTaGCATTACAATAACGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: YRQLKNTVILKRSDTSSILNWSH*HYNNAD Trigger: GTCAGCGTTATTGTAATGCAAGTGTGACCAATTCAG...AATAGATGATGTGTCAGATCTCTTTAGGATGACTGTATTTTTCAGTTGCCGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000053243.6 |
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| CDS CCA 72 bp | CGTGGTGACAAGAATGGTTGCGCCTTCCTCCATAGCTaGGAGTGGAAAGCAATGGTCAGAGTCGACCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: RGDKNGCAFLHS*EWKAMVRVDLR Trigger: CCGAAGGTCGACTCTGACCATTGCTTTCCACTCCCAGCTATGGAGGAAGGCGCAACCATTCTTGTCACCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS CAA 90 bp | GCTGGGAGTGGAAAGCAATGGTCAGAGTCGACCTTCGGTTTGCTCTaGATGCAGTCTTCACAGGTGCATTCTTCCACCGTGTACTCGAGG | + |
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Preference number: 6 (lower is better) Translates to: AGSGKQWSESTFGLL*MQSSQVHSSTVYSR Trigger: CCTCGAGTACACGGTGGAAGAATGCACCTGTGAAGACTGCATCAAGAGCAAACCGAAGGTCGACTCTGACCATTGCTTTCCACTCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS CCA 72 bp | GACAAGAATGGTTGCGCCTTCCTCCATAGCTGGGAGTaGAAAGCAATGGTCAGAGTCGACCTTCGGTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: DKNGCAFLHSWE*KAMVRVDLRFA Trigger: AGCAAACCGAAGGTCGACTCTGACCATTGCTTTCCACTCCCAGCTATGGAGGAAGGCGCAACCATTCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS CAA 90 bp | TCCATAGCTGGGAGTGGAAAGCAATGGTCAGAGTCGACCTTCGGTTaGCTCTTGATGCAGTCTTCACAGGTGCATTCTTCCACCGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: SIAGSGKQWSESTFG*LLMQSSQVHSSTVY Trigger: GTACACGGTGGAAGAATGCACCTGTGAAGACTGCATCAAGAGCAAACCGAAGGTCGACTCTGACCATTGCTTTCCACTCCCAGCTATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS CAA 72 bp | GGAAAGCAATGGTCAGAGTCGACCTTCGGTTTGCTCTaGATGCAGTCTTCACAGGTGCATTCTTCCACCGTG | + |
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Preference number: 6 (lower is better) Translates to: GKQWSESTFGLL*MQSSQVHSSTV Trigger: CACGGTGGAAGAATGCACCTGTGAAGACTGCATCAAGAGCAAACCGAAGGTCGACTCTGACCATTGCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS CAA 72 bp | GGGAGTGGAAAGCAATGGTCAGAGTCGACCTTCGGTTaGCTCTTGATGCAGTCTTCACAGGTGCATTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GSGKQWSESTFG*LLMQSSQVHSS Trigger: GGAAGAATGCACCTGTGAAGACTGCATCAAGAGCAAACCGAAGGTCGACTCTGACCATTGCTTTCCACTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS GCA 72 bp | GCAATAGTCATTCGTTTTCGTGGTGACAAGAATGGTTaGGCCTTCCTCCATAGCTGGGAGTGGAAAGCAATG | + |
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Preference number: 6 (lower is better) Translates to: AIVIRFRGDKNG*AFLHSWEWKAM Trigger: CATTGCTTTCCACTCCCAGCTATGGAGGAAGGCGCAACCATTCTTGTCACCACGAAAACGAATGACTATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS CAA 72 bp | TATGCAAGCATGCAACAAACTGTCAAAATATTCATTTaGGGAGCACTGCCCAGCCATCTGCAACATGATCAC | + |
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Preference number: 6 (lower is better) Translates to: YASMQQTVKIFI*GALPSHLQHDH Trigger: GTGATCATGTTGCAGATGGCTGGGCAGTGCTCCCAAAATGAATATTTTGACAGTTTGTTGCATGCTTGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS CAA 90 bp | TTGACAAGGTATGCAAGCATGCAACAAACTGTCAAAATATTCATTTaGGGAGCACTGCCCAGCCATCTGCAACATGATCACAAAAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LTRYASMQQTVKIFI*GALPSHLQHDHKKK Trigger: TTTCTTTTTGTGATCATGTTGCAGATGGCTGGGCAGTGCTCCCAAAATGAATATTTTGACAGTTTGTTGCATGCTTGCATACCTTGTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000053243.6 ENST00000396495.3 |
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| CDS TCA 72 bp | CATGTTAGAGGAGGAGTATTAGAAGAACATCGAAGTTaGCAAGGTATGCAAGCATGCAACAAACTGTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: HVRGGVLEEHRS*QGMQACNKLSK Trigger: TTTTGACAGTTTGTTGCATGCTTGCATACCTTGTCAACTTCGATGTTCTTCTAATACTCCTCCTCTAACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000053243.6 ENST00000396495.3 ENST00000562385.1 |
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