RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFRSF14 (Homo sapiens)

Ensembl gene IDs: ENSG00000157873, ENSG00000273936

Ensembl transcript IDs: ENST00000355716.5, ENST00000409119.5, ENST00000426449.5, ENST00000434817.5, ENST00000435221.6, ENST00000442392.6, ENST00000451778.5, ENST00000463471.6, ENST00000463835.5, ENST00000466750.5, ENST00000471768.1, ENST00000475523.5, ENST00000480305.1, ENST00000482074.6, ENST00000482602.5, ENST00000496064.5, ENST00000617968.3, ENST00000621877.3, ENST00000625292.2, ENST00000625516.2, ENST00000625695.2, ENST00000626042.2, ENST00000626465.2, ENST00000627750.1, ENST00000627817.2, ENST00000628337.2, ENST00000629075.2, ENST00000629209.1, ENST00000629542.2, ENST00000629696.1, ENST00000630160.2, ENST00000631202.2

Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGGAAGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTaGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAG +
Preference number: 1 (lower is better)
Translates to: TEASPGRSPQASGLR*FRQVDSLFQQPSLQ
Trigger: CTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCTTCCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR CCA 90 bp CAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTaGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGT +
Preference number: 1 (lower is better)
Translates to: QGGAPKPPGSGGSAR*TASFSSRRSRYLWR
Trigger: ACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR TCA 90 bp GATATTTACATCCTCCCACAGCATCTCCCCAAATACACTGTTTCATaGCAAATAGAAAACAGGAGCCGAATTCAAATCCAATTTAGAAAA +
Preference number: 1 (lower is better)
Translates to: DIYILPQHLPKYTVS*QIENRSRIQIQFRK
Trigger: TTTTCTAAATTGGATTTGAATTCGGCTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGGATGTAAATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR-3UTR CCA 90 bp CCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGCGCTCCAGGTATCTCTaGCGTCGGGGTGCAGAGTCT +
Preference number: 2 (lower is better)
Translates to: PAQGGAPKPPGSGGSARWRSRYL*RRGAES
Trigger: AGACTCTGCACCCCGACGCCAGAGATACCTGGAGCG...CCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR-3UTR CCA 90 bp CACCGGGCGGCCCAGGACAGCGGTGCCGCTGAAATACTCTCAGGGCCCTGCGCTGACCGAGGCCAGACCTaGGAGCAGCAGCTCCCGCTG +
Preference number: 2 (lower is better)
Translates to: HRAAQDSGAAEILSGPCADRGQT*EQQLPL
Trigger: CAGCGGGAGCTGCTGCTCCCAGGTCTGGCCTCGGTC...AGCGCAGGGCCCTGAGAGTATTTCAGCGGCACCGCTGTCCTGGGCCGCCCGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629209.1
3UTR-3UTR CCA 90 bp GGGCTGGGTGTGTGGTCTGTGAGCGAGGGGCAACTGGCGCTCCTCCTCAGGACTGCCTCCGGGCTCCGGTaGTTCCGCCAGGTGGACAGC +
Preference number: 2 (lower is better)
Translates to: GLGVWSVSEGQLALLLRTASGLR*FRQVDS
Trigger: GCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGC...AGTCCTGAGGAGGAGCGCCAGTTGCCCCTCGCTCACAGACCACACACCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR-3UTR CCA 90 bp GCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCCGCTCCAGGTATCTCTaGCGTCGGGGTGCAGAGTCT +
Preference number: 2 (lower is better)
Translates to: APKPPGSGGSARWTASFSRSRYL*RRGAES
Trigger: AGACTCTGCACCCCGACGCCAGAGATACCTGGAGCG...GCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR-3UTR CCA 90 bp AGATGTGGCACCGGGCGGCCCAGGACAGCGGTGCCGCTGAAATACTCTCAGGGCCGCGGATGCAGCAGGTaGCTGGTGACCGAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: RCGTGRPRTAVPLKYSQGRGCSR*LVTEAR
Trigger: TCTGGCCTCGGTCACCAGCCACCTGCTGCATCCGCG...GCCCTGAGAGTATTTCAGCGGCACCGCTGTCCTGGGCCGCCCGGTGCCACATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629209.1
3UTR-3UTR GCA 90 bp CCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCACCGGGGGCTGCACCTaGCACTCCCATGTCCTCGGC +
Preference number: 2 (lower is better)
Translates to: PIAGLGQVRQTSEVSSRSTGGCT*HSHVLG
Trigger: GCCGAGGACATGGGAGTGGCAGGTGCAGCCCCCGGT...GCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR GCA 90 bp CTCCCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGACCGGGGGCTGCACCTaGCACTCCCATGTCCTCGGC +
Preference number: 2 (lower is better)
Translates to: LPIAGLGQVRQTSEVSSRTGGCT*HSHVLG
Trigger: GCCGAGGACATGGGAGTGGCAGGTGCAGCCCCCGGT...CCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR TCA 90 bp ATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCGACACTCCCTGGGGCTaGGTGAGTACCGGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: IAGLGQVRQTSEVSSRSCDTPWG*VSTGGC
Trigger: GCAGCCCCCGGTACTCACTCAGCCCCAGGGAGTGTC...GCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR GCA 90 bp GACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACCCAGCCCCCCACTCCCGCGGATaGAGCAGGTGGCTGGTGACC +
Preference number: 2 (lower is better)
Translates to: DKSDRPLRSHPGAATNPAPHSRG*SRWLVT
Trigger: GGTCACCAGCCACCTGCTGCATCCGCGGGAGTGGGG...GGCTGGGTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR GCA 90 bp ATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCCCCACTCCCGCGGATaGAGCAGGTGGCTGGTGACC +
Preference number: 2 (lower is better)
Translates to: IAGLGQVRQTSEVSSRSCPHSRG*SRWLVT
Trigger: GGTCACCAGCCACCTGCTGCATCCGCGGGAGTGGGG...GCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR CCA 90 bp CCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCCGCGGATGCAGCAGGTaGCTGGTGACCGAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: PIAGLGQVRQTSEVSSRSRGCSR*LVTEAR
Trigger: TCTGGCCTCGGTCACCAGCCACCTGCTGCATCCGCG...GCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR TCA 90 bp GGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACGACACTCCCTGGGGCTaGGTGAGTACCGGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: GLDKSDRPLRSHPGAATNDTPWG*VSTGGC
Trigger: GCAGCCCCCGGTACTCACTCAGCCCCAGGGAGTGTC...GTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR CCA 90 bp GGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACGACCGAGGCCAGACCTaGGAGCAGCAGCTCCCGCTG +
Preference number: 2 (lower is better)
Translates to: GLDKSDRPLRSHPGAATNDRGQT*EQQLPL
Trigger: CAGCGGGAGCTGCTGCTCCCAGGTCTGGCCTCGGTC...GTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR GCA 90 bp ATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCGTGAGTACCGGGGGCTaGACCTGCCACTCCCATGTC +
Preference number: 2 (lower is better)
Translates to: IAGLGQVRQTSEVSSRSCVSTGG*TCHSHV
Trigger: GACATGGGAGTGGCAGGTGCAGCCCCCGGTACTCAC...GCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR CCA 90 bp CTCCCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGTCTCCACACTTGGCCTaGACGGAGACGATCACCTTG +
Preference number: 2 (lower is better)
Translates to: LPIAGLGQVRQTSEVSSRSPHLA*TETITL
Trigger: CAAGGTGATCGTCTCCGTCCAGGCCAAGTGTGGAGA...CCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR TCA 90 bp AGATGTGGCACCGGGCGGCCCAGGACAGCGGTGCCGCTGAAATACTCTCAGGGCCATCGTCAACATCATTaGTTTCTCCACACTTGGCCT +
Preference number: 2 (lower is better)
Translates to: RCGTGRPRTAVPLKYSQGHRQHH*FLHTWP
Trigger: AGGCCAAGTGTGGAGAAATCAATGATGTTGACGATG...GCCCTGAGAGTATTTCAGCGGCACCGCTGTCCTGGGCCGCCCGGTGCCACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629209.1
3UTR-3UTR CCA 90 bp ATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCTCTCCACACTTGGCCTaGACGGAGACGATCACCTTG +
Preference number: 2 (lower is better)
Translates to: IAGLGQVRQTSEVSSRSCSPHLA*TETITL
Trigger: CAAGGTGATCGTCTCCGTCCAGGCCAAGTGTGGAGA...GCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR TCA 90 bp ATTAAACAACTGTTTTCAAAGATGTGGCACCGGGCGGCCCAGGACAGCGGTGCCAGTCAGACAGACCTCTaGGGTCTCATCCCGGAGCTG +
Preference number: 2 (lower is better)
Translates to: IKQLFSKMWHRAAQDSGASQTDL*GLIPEL
Trigger: CAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACT...GGCACCGCTGTCCTGGGCCGCCCGGTGCCACATCTTTGAAAACAGTTGTTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629209.1
3UTR-3UTR TCA 90 bp AAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCCAGTCTGGGTGTGTGGTCTGTaGGCGAGGGGCAACTGGCGC +
Preference number: 2 (lower is better)
Translates to: KITSDVVSTKHHTAANPVWVCGL*ARGNWR
Trigger: GCGCCAGTTGCCCCTCGCTCACAGACCACACACCCA...GACTGGGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR-3UTR TCA 90 bp CTCCCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGCATCGTCAACATCATTaGTTTCTCCACACTTGGCCT +
Preference number: 2 (lower is better)
Translates to: LPIAGLGQVRQTSEVSSRHRQHH*FLHTWP
Trigger: AGGCCAAGTGTGGAGAAATCAATGATGTTGACGATG...CCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR CCA 90 bp AAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCCAGTCGGTGGTTCCGCCAGGTaGACAGCCTCTTTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: KITSDVVSTKHHTAANPVGGSAR*TASFSS
Trigger: GCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACC...GACTGGGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR-3UTR CCA 90 bp TTTAGAAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCCATGGGAATGGCACGTaGCGTCCCCAGCTCTACCCC +
Preference number: 2 (lower is better)
Translates to: FRKSLPMWYPLNTTLQPTHGNGT*RPQLYP
Trigger: GGGGTAGAGCTGGGGACGCCACGTGCCATTCCCATG...GGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTTCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR-3UTR CCA 90 bp AAGATATTTACATCCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAAGCCCTCACTGGCCCATaGGAATGGCACGTGGCGTCC +
Preference number: 2 (lower is better)
Translates to: KIFTSSHSISPNTLFHDKALTGP*EWHVAS
Trigger: GGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGC...TTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGGATGTAAATATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR-3UTR CCA 90 bp AAGATATTTACATCCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAAGCCCCAGGCCCTCACTaGCCCATGGGAATGGCACGT +
Preference number: 2 (lower is better)
Translates to: KIFTSSHSISPNTLFHDKAPGPH*PMGMAR
Trigger: ACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGC...TTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGGATGTAAATATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR-3UTR CCA 90 bp CCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGCCGAATTCAAATCCAAAATCACTTCCGATGTaGTATCCACTAAACACCACA +
Preference number: 2 (lower is better)
Translates to: PQIHCFMTNRKQEPNSNPKSLPM*YPLNTT
Trigger: TGTGGTGTTTAGTGGATACCACATCGGAAGTGATTT...TGGATTTGAATTCGGCTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR-3UTR CCA 90 bp AAGATATTTACATCCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAAAAATCACTTCCGATGTaGTATCCACTAAACACCACA +
Preference number: 2 (lower is better)
Translates to: KIFTSSHSISPNTLFHDKKSLPM*YPLNTT
Trigger: TGTGGTGTTTAGTGGATACCACATCGGAAGTGATTT...TTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGGATGTAAATATCTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR CCA 72 bp AGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTaGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCG +
Preference number: 3 (lower is better)
Translates to: SPGRSPQASGLR*FRQVDSLFQQP
Trigger: CGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR CCA 72 bp GCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTaGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTAT +
Preference number: 3 (lower is better)
Translates to: APKPPGSGGSAR*TASFSSRRSRY
Trigger: ATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR CCA 72 bp TCAGGCCACAGCAGAACAGAGGCCCCAGGCCCTCACTaGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: SGHSRTEAPGPH*PMGMARGVPSS
Trigger: AGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGCCTCTGTTCTGCTGTGGCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR-3UTR CAA 90 bp CACCGGGCGGCCCAGGACAGCGGTGCCGCTGAAATACTCTCAGGGCCCTGCGCTTTGATTTCTCCACACTaGGCCTGGACGGAGACGATC +
Preference number: 3 (lower is better)
Translates to: HRAAQDSGAAEILSGPCALISPH*AWTETI
Trigger: GATCGTCTCCGTCCAGGCCAAGTGTGGAGAAATCAA...AGCGCAGGGCCCTGAGAGTATTTCAGCGGCACCGCTGTCCTGGGCCGCCCGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629209.1
3UTR TCA 72 bp CCCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTaGGGTCTCATCCCGGAGCTGCCACTAACCCAGCCT +
Preference number: 3 (lower is better)
Translates to: PHSRAWTSQTDL*GLIPELPLTQP
Trigger: AGGCTGGGTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR CAA 90 bp GGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACTTGATTTCTCCACACTaGGCCTGGACGGAGACGATC +
Preference number: 3 (lower is better)
Translates to: GLDKSDRPLRSHPGAATNLISPH*AWTETI
Trigger: GATCGTCTCCGTCCAGGCCAAGTGTGGAGAAATCAA...GTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR CAA 90 bp GACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACCCAGCCTCATCGTCAACATCATaGATTTCTCCACACTTGGCC +
Preference number: 3 (lower is better)
Translates to: DKSDRPLRSHPGAATNPASSSTS*ISPHLA
Trigger: GGCCAAGTGTGGAGAAATCAATGATGTTGACGATGA...GGCTGGGTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR CAA 90 bp GGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACTCATCGTCAACATCATaGATTTCTCCACACTTGGCC +
Preference number: 3 (lower is better)
Translates to: GLDKSDRPLRSHPGAATNSSSTS*ISPHLA
Trigger: GGCCAAGTGTGGAGAAATCAATGATGTTGACGATGA...GTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
3UTR-3UTR CAA 90 bp CCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGCCGAATTCAAATCCACAACCCAGTCCAGCCTaGGCTGTGAGGCAGTGCCCG +
Preference number: 3 (lower is better)
Translates to: PQIHCFMTNRKQEPNSNPQPSPA*AVRQCP
Trigger: CGGGCACTGCCTCACAGCCAAGGCTGGACTGGGTTG...TGGATTTGAATTCGGCTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
3UTR TCA 72 bp ATCCTCCCACAGCATCTCCCCAAATACACTGTTTCATaGCAAATAGAAAACAGGAGCCGAATTCAAATCCAA +
Preference number: 3 (lower is better)
Translates to: ILPQHLPKYTVS*QIENRSRIQIQ
Trigger: TTGGATTTGAATTCGGCTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTCCCTCTGGCCCGGGCTaGAGGTGGCGTAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SQPRAEPPSLRAPVVPPGPSGPG*RWRKRG
Trigger: GCCGCGCTTACGCCACCTCCAGCCCGGGCCAGAGGG...ACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp AGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGTCCAGCCTTGGCTGTaGGGCAGTGCCCGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SQPRAEPPSLRAPVVPPGVQPWL*GSARGL
Trigger: CAGGCCCCGGGCACTGCCTCACAGCCAAGGCTGGAC...ACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGTGGGTGGAGCGGCGCTaGGGGACACAGGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PRAEPPSLRAPVVPPGGQWVERR*GTQVGP
Trigger: AGGGCCCACCTGTGTCCCCCAGCGCCGCTCCACCCA...CTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTCTCAGGCCTGCTGGGTaGAGCGGCGCTGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: SQPRAEPPSLRAPVVPPGLRPAG*SGAGGH
Trigger: GTGTCCCCCAGCGCCGCTCCACCCAGCAGGCCTGAG...ACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGCAGGACGGCAGAGCTaGGGCGTAGCAGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SQPRAEPPSLRAPVVPPGAGRQS*GVAGGS
Trigger: GGAGCCCCCTGCTACGCCCCAGCTCTGCCGTCCTGC...ACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp GCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTCCACGGCCACCGTGGTaGCGTCCGGAGGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AEPPSLRAPVVPPGGQPLPRPPW*RPEGPA
Trigger: TGCAGGCCCCTCCGGACGTCACCACGGTGGCCGTGG...AAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp CCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGTGGGTGTGTGGTCTGTaGGCGAGGGGCAACTGGCGC +
Preference number: 4 (lower is better)
Translates to: PRAEPPSLRAPVVPPGGQWVCGL*ARGNWR
Trigger: GCGCCAGTTGCCCCTCGCTCACAGACCACACACCCA...CTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp CCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGCTCCAGGAGGCTCCATaGCTCAGGCTCAGACCGGCA +
Preference number: 4 (lower is better)
Translates to: PAQGGAPKPPGSGGSARWLQEAP*LRLRPA
Trigger: TGCCGGTCTGAGCCTGAGGCATGGAGCCTCCTGGAG...CCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGCCCCAGGCCCTCACTaGCCCATGGGAATGGCACGT +
Preference number: 4 (lower is better)
Translates to: SQPRAEPPSLRAPVVPPGAPGPH*PMGMAR
Trigger: ACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGC...ACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp GGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGCCACGGCCACCGTGGTaGCGTCCGGAGGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GSGGSARWTASFSSRRSRPRPPW*RPEGPA
Trigger: TGCAGGCCCCTCCGGACGTCACCACGGTGGCCGTGG...CCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp GCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGAGGGGCTCAGGCCTaGTGGGTGGAGCGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: APKPPGSGGSARWTASFSRGAQA*WVERRW
Trigger: CCAGCGCCGCTCCACCCAGCAGGCCTGAGCCCCTCT...GCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp CCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGATACCCAGTGGGAGCTaGTGGTCCCAGCTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: PRAEPPSLRAPVVPPGGQIPSGS*WSQLRP
Trigger: AGGCCGGAGCTGGGACCAGCAGCTCCCACTGGGTAT...CTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp AGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTACGTCCGGAGGGGCCTaGAGGGCCTCAATGACTGTG +
Preference number: 4 (lower is better)
Translates to: SQPRAEPPSLRAPVVPPGTSGGA*RASMTV
Trigger: CACAGTCATTGAGGCCCTGCAGGCCCCTCCGGACGT...ACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTCGTCGGTTTTGGGGGTaGATCTCCAGGGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SQPRAEPPSLRAPVVPPGRRFWG*ISREEA
Trigger: GGCCTCCTCCCTGGAGATCCACCCCCAAAACCGACG...ACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCATGGGAATGGCACGTaGCGTCCCCAGCTCTACCCC +
Preference number: 4 (lower is better)
Translates to: PRAEPPSLRAPVVPPGGQHGNGT*RPQLYP
Trigger: GGGGTAGAGCTGGGGACGCCACGTGCCATTCCCATG...CTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp AGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCAGAGGGGCTCAGGCCTaGTGGGTGGAGCGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SLRAPVVPPGGQPLSAAVRGAQA*WVERRW
Trigger: CCAGCGCCGCTCCACCCAGCAGGCCTGAGCCCCTCT...GACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp AGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGTGGGCAATGTAGGTaGCTGGAGGGCAGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SQPRAEPPSLRAPVVPPGGGQCR*LEGRVH
Trigger: GTGAACCCTGCCCTCCAGGCACCTACATTGCCCACC...ACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGCACTCGGAGCCCACTaGGTACTCGTCCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: SQPRAEPPSLRAPVVPPGALGAH*VLVLLA
Trigger: TGCAAGGAGGACGAGTACCCAGTGGGCTCCGAGTGC...ACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCACCCTTCTGCACCCTCTaGCCCGGGCTGGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RAPVVPPGGQPLSAAVAPPFCTL*PGLEVA
Trigger: CGCCACCTCCAGCCCGGGCCAGAGGGTGCAGAAGGG...TGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGACGGAAGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGGAGGGCTGGGTGTGTaGTCTGTGAGCGAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RRKPAQGGAPKPPGSGGSGGLGV*SVSEGQ
Trigger: TTGCCCCTCGCTCACAGACCACACACCCAGCCCTCC...GGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCTTCCGTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp GCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTAGGGTTCACACACTGTaGCCGTCAGCTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AEPPSLRAPVVPPGGQPLRVHTL*PSAPRR
Trigger: CCTGCGGGGAGCTGACGGGCACAGTGTGTGAACCCT...AAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GGCCCCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTACGCAGCAGGGGGTGTCTaGCAGCAGAGAGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GPRPSLAHGNGTWRPQLYAAGGV*QQRGAQ
Trigger: CTGAGCCCCTCTCTGCTGCCAGACACCCCCTGCTGC...GTAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGTCAAGACGTCGGTTTTaGGGGTGGATCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PAQGGAPKPPGSGGSARWSRRRF*GWISRE
Trigger: CTCCCTGGAGATCCACCCCCAAAACCGACGTCTTGA...CCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCCGGCGTTCTCTGTCCTaGAGCAGTTCCGGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: APKPPGSGGSARWTASFSRRSLS*SSSGSR
Trigger: GCGCGAGCCGGAACTGCTCCAGGACAGAGAACGCCG...GCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCCCTCCAGGGTCCCATTaGGAGAGAAGGTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: APKPPGSGGSARWTASFSPPGSH*ERRSPG
Trigger: CCCCGGGGACCTTCTCTCCCAATGGGACCCTGGAGG...GCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp GCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGGGTTCACACACTGTaGCCGTCAGCTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: APKPPGSGGSARWTASFSRVHTL*PSAPRR
Trigger: CCTGCGGGGAGCTGACGGGCACAGTGTGTGAACCCT...GCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp GCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCTCTGGCGTCGGGGTaGAGAGTCTGTGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: AEPPSLRAPVVPPGGQPLSLASG*RVCGSV
Trigger: CACTGACCCACAGACTCTGCACCCCGACGCCAGAGA...AAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCTGCTGAGGCCACAAGAGTCAGACGCGCAGACAGCTGGGGTCTGAAGGGCCCTGCAGGACGGCAGAGCTaGGGCGTAGCAGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PAEATRVRRADSWGLKGPAGRQS*GVAGGS
Trigger: GGAGCCCCCTGCTACGCCCCAGCTCTGCCGTCCTGC...AGGGCCCTTCAGACCCCAGCTGTCTGCGCGTCTGACTCTTGTGGCCTCAGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTAACCTGGACTGCACTTaGGGCAGCACTCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AEPPSLRAPVVPPGGQPLNLDCT*GSTRSP
Trigger: TGGGCTCCGAGTGCTGCCCCAAGTGCAGTCCAGGTT...AAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCGATGCAGAAGTGGCCTaGGCTGCAGCCACACACGGC +
Preference number: 4 (lower is better)
Translates to: APKPPGSGGSARWTASFSDAEVA*AAATHG
Trigger: GCCGTGTGTGGCTGCAGCCCAGGCCACTTCTGCATC...GCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTGGACGATGCAGAAGTaGCCTGGGCTGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: AEPPSLRAPVVPPGGQPLWTMQK*PGLQPH
Trigger: GTGTGGCTGCAGCCCAGGCCACTTCTGCATCGTCCA...AAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp TCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCCCTCTGGCCCGGGCTaGAGGTGGCGTAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SARWTASFSSRRSRYLWRPSGPG*RWRKRG
Trigger: GCCGCGCTTACGCCACCTCCAGCCCGGGCCAGAGGG...ACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGGCCCCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTAGCCCTCACTGGCCCATaGGAATGGCACGTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: RPQALTGPWEWHVASPALALTGP*EWHVAS
Trigger: GGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGC...TAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCCCTCACTGGCCCATaGGAATGGCACGTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: SLRAPVVPPGGQPLSAAVALTGP*EWHVAS
Trigger: GGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGC...GACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp GCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTGCTCCTCCCCGTGAATaGGGGTATTGTCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AEPPSLRAPVVPPGGQPLAPPRE*GYCLLH
Trigger: GTGGAGGAGACAATACCCTCATTCACGGGGAGGAGC...AAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp CGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTGTCCAGCCTTGGCTGTaGGGCAGTGCCCGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RWFRQVDSLFQQPSLQVSVQPWL*GSARGL
Trigger: CAGGCCCCGGGCACTGCCTCACAGCCAAGGCTGGAC...AGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp GCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCGGTGGGCAATGTAGGTaGCTGGAGGGCAGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: APKPPGSGGSARWTASFSGGQCR*LEGRVH
Trigger: GTGAACCCTGCCCTCCAGGCACCTACATTGCCCACC...GCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp GGCCCCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTACTCTCTGGCGTCGGGGTaGAGAGTCTGTGGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GPRPSLAHGNGTWRPQLYSLASG*RVCGSV
Trigger: CACTGACCCACAGACTCTGCACCCCGACGCCAGAGA...GTAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCGGCACGCGGCGCAGTaGTCCCCGTCCTGGACGATG +
Preference number: 4 (lower is better)
Translates to: RWFRQVDSLFQQPSLQVSRHAAQ*SPSWTM
Trigger: CATCGTCCAGGACGGGGACCACTGCGCCGCGTGCCG...AGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTCGGCACGCGGCGCAGTaGTCCCCGTCCTGGACGATG +
Preference number: 4 (lower is better)
Translates to: RWTASFSSRRSRYLWRRGRHAAQ*SPSWTM
Trigger: CATCGTCCAGGACGGGGACCACTGCGCCGCGTGCCG...ACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCCCTTCTGCACCCTCTaGCCCGGGCTGGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RWFRQVDSLFQQPSLQVSPFCTL*PGLEVA
Trigger: CGCCACCTCCAGCCCGGGCCAGAGGGTGCAGAAGGG...AGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTTCCTGTCTTTTCCGCTaGACGGAGACGATCACCTTG +
Preference number: 4 (lower is better)
Translates to: SQPRAEPPSLRAPVVPPGSCLFR*TETITL
Trigger: CAAGGTGATCGTCTCCGTCCAGCGGAAAAGACAGGA...ACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTACCCCACATGGGAATGGCACGTaGCGTCCCCAGCTCTACCCC +
Preference number: 4 (lower is better)
Translates to: PGPHWPMGMARGVPSSTPHGNGT*RPQLYP
Trigger: GGGGTAGAGCTGGGGACGCCACGTGCCATTCCCATG...TGGGGTAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCAGACGCGCAGACAGCTaGGGTCTGAAGGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLRAPVVPPGGQPLSAAVRRADS*GLKGPL
Trigger: CAGAGGGCCCTTCAGACCCCAGCTGTCTGCGCGTCT...GACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp AGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGGGCTCCCAGGAAGGTaGGATACAGCACCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SLRAPVVPPGGQPLSAAVGLPGR*DTAPAS
Trigger: TGAGGCTGGTGCTGTATCTCACCTTCCTGGGAGCCC...GACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp GCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTCGGAGACGATCACCTTaGCTACATCACCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AEPPSLRAPVVPPGGQPLRRRSP*LHHPLA
Trigger: AGCCAAGGGGTGATGTAGTCAAGGTGATCGTCTCCG...AAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp AGATGTGGCACCGGGCGGCCCAGGACAGCGGTGCCGCTGAAATACTCTCAGGGCGGACAGCGGTGCCGCTaGAATACTCTCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RCGTGRPRTAVPLKYSQGGQRCR*NTLRAL
Trigger: CAGGGCCCTGAGAGTATTTCAGCGGCACCGCTGTCC...GCCCTGAGAGTATTTCAGCGGCACCGCTGTCCTGGGCCGCCCGGTGCCACATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629209.1
CDS-3UTR GCA 90 bp CCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTACCCCAACTCAGCGCCATTGCTaGGGCTGTGGGCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PGPHWPMGMARGVPSSTPTQRHC*GCGPEE
Trigger: CTCTTCTGGCCCACAGCCGCAGCAATGGCGCTGAGT...TGGGGTAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp CCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTACCCCAAGAAGTGGCCTGGGCTaGAGCCACACACGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: PGPHWPMGMARGVPSSTPRSGLG*SHTRRS
Trigger: AGAACGCCGTGTGTGGCTGCAGCCCAGGCCACTTCT...TGGGGTAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCACGCTCCAGGTATCTCTaGCGTCGGGGTGCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RAPVVPPGGQPLSAAVAPRSRYL*RRGAES
Trigger: AGACTCTGCACCCCGACGCCAGAGATACCTGGAGCG...TGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGGGTGGTTCCGCCAGGTaGACAGCCTCTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSGGSARWTASFSSRRSRGGSAR*TASFSS
Trigger: GCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACC...CCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp CGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGAATCCGCCTCGGTGTaGCAAGCTGTGCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: RAPVVPPGGQPLSAAVAPESASV*QAVPQN
Trigger: GTTCTGAGGCACAGCTTGTCACACCGAGGCGGATTC...TGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp AGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCCACTTGGTCTGGTGCTaGCATTCCTCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SLRAPVVPPGGQPLSAAVHLVWC*HSSRVP
Trigger: TGGGACCCTGGAGGAATGTCAGCACCAGACCAAGTG...GACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp GGCCCCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTACTTGGGCTCCTCCCCGTaGATGAGGGTATTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GPRPSLAHGNGTWRPQLYLGSSP*MRVLSP
Trigger: AGGAGACAATACCCTCATTCACGGGGAGGAGCCCAA...GTAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp TCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTTGGGTGTGTGGTCTGTaGGCGAGGGGCAACTGGCGC +
Preference number: 4 (lower is better)
Translates to: SARWTASFSSRRSRYLWRWVCGL*ARGNWR
Trigger: GCGCCAGTTGCCCCTCGCTCACAGACCACACACCCA...ACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp CCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCGACACTCCCTGGGGCTaGGTGAGTACCGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PIAGLGQVRQTSEVSSRSDTPWG*VSTGGC
Trigger: GCAGCCCCCGGTACTCACTCAGCCCCAGGGAGTGTC...GCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR GCA 90 bp CCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTACCCCACACGATAACCTGGACTaGACTTGGGGCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: PGPHWPMGMARGVPSSTPHDNLD*TWGSTR
Trigger: CCGAGTGCTGCCCCAAGTGCAGTCCAGGTTATCGTG...TGGGGTAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCTGCTGAGGCCACAAGAGTCAGACGCGCAGACAGCTGGGGTCTGAAGGGCCCTTCGCGCGCAGGCCCATaGCTGGGTCACACATTTGGC +
Preference number: 4 (lower is better)
Translates to: PAEATRVRRADSWGLKGPSRAGP*LGHTFG
Trigger: GCCAAATGTGTGACCCAGCCATGGGCCTGCGCGCGA...AGGGCCCTTCAGACCCCAGCTGTCTGCGCGTCTGACTCTTGTGGCCTCAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCAACCACCATACCCAGTaGGAGCTGCTGGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLRAPVVPPGGQPLSAAVNHHTQ*ELLVPA
Trigger: AGCTGGGACCAGCAGCTCCCACTGGGTATGGTGGTT...GACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GCTGGGTGTGTGGTCTGTGAGCGAGGGGCAACTGGCGCTCCTCCTCAGGACTCTACTGGCCCATGGGAATaGCACGTGGCGTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGCVVCERGATGAPPQDSTGPWE*HVASPA
Trigger: AGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGT...AGAGTCCTGAGGAGGAGCGCCAGTTGCCCCTCGCTCACAGACCACACACCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCTGCTGAGGCCACAAGAGTCAGACGCGCAGACAGCTGGGGTCTGAAGGGCCCTGGAGGGCTGGGTGTGTaGTCTGTGAGCGAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PAEATRVRRADSWGLKGPGGLGV*SVSEGQ
Trigger: TTGCCCCTCGCTCACAGACCACACACCCAGCCCTCC...AGGGCCCTTCAGACCCCAGCTGTCTGCGCGTCTGACTCTTGTGGCCTCAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp GGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTGGGGCTCCCAGGAAGGTaGGATACAGCACCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GGQPLSAAVAPGISGVGVGLPGR*DTAPAS
Trigger: TGAGGCTGGTGCTGTATCTCACCTTCCTGGGAGCCC...CACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp GGCCCCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTACACTTGCTTAGGCCATTaGGGTGGGCAATGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: GPRPSLAHGNGTWRPQLYTCLGH*GGQCRC
Trigger: GCACCTACATTGCCCACCTCAATGGCCTAAGCAAGT...GTAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp AGGCCCCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTAGATGACGAGGCTCCCTaGGAGAAACCACCATACCCA +
Preference number: 4 (lower is better)
Translates to: RPQALTGPWEWHVASPALDDEAP*EKPPYP
Trigger: TGGGTATGGTGGTTTCTCTCAGGGAGCCTCGTCATC...TAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp CTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTGCAGAGTCTGTGGCTCCAGGAGGCTCCATaGCTCAGGCTCAGACCGGCA +
Preference number: 4 (lower is better)
Translates to: LSAAVAPGISGVGVQSLWLQEAP*LRLRPA
Trigger: TGCCGGTCTGAGCCTGAGGCATGGAGCCTCCTGGAG...CCACAGACTCTGCACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp TTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGACGTCCGGAGGGGCCTaGAGGGCCTCAATGACTGTG +
Preference number: 4 (lower is better)
Translates to: FRQVDSLFQQPSLQVSLATSGGA*RASMTV
Trigger: CACAGTCATTGAGGCCCTGCAGGCCCCTCCGGACGT...CGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp GACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACCCAGCCACCGGGGGCTGCACCTaGCACTCCCATGTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: DKSDRPLRSHPGAATNPATGGCT*HSHVLG
Trigger: GCCGAGGACATGGGAGTGGCAGGTGCAGCCCCCGGT...GGCTGGGTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR GCA 90 bp ATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCACCGGGGGCTGCACCTaGCACTCCCATGTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: IAGLGQVRQTSEVSSRSCTGGCT*HSHVLG
Trigger: GCCGAGGACATGGGAGTGGCAGGTGCAGCCCCCGGT...GCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR CCA 90 bp GGCCCCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTACCTTCACACGATAACCTaGACTGCACTTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPRPSLAHGNGTWRPQLYLHTIT*TALGAA
Trigger: TGCTGCCCCAAGTGCAGTCCAGGTTATCGTGTGAAG...GTAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GCTGGGTGTGTGGTCTGTGAGCGAGGGGCAACTGGCGCTCCTCCTCAGGACTCTGCGCAGGCCCATGGCTaGGTCACACATTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: AGCVVCERGATGAPPQDSAQAHG*VTHLAL
Trigger: CAGTGCCAAATGTGTGACCCAGCCATGGGCCTGCGC...AGAGTCCTGAGGAGGAGCGCCAGTTGCCCCTCGCTCACAGACCACACACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTGATGCAGAAGTGGCCTaGGCTGCAGCCACACACGGC +
Preference number: 4 (lower is better)
Translates to: RWFRQVDSLFQQPSLQVSDAEVA*AAATHG
Trigger: GCCGTGTGTGGCTGCAGCCCAGGCCACTTCTGCATC...AGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCTGCTGAGGCCACAAGAGTCAGACGCGCAGACAGCTGGGGTCTGAAGGGCCCTCAGTGGTCCCCGTCCTaGACGATGCAGAAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PAEATRVRRADSWGLKGPQWSPS*TMQKWP
Trigger: AGGCCACTTCTGCATCGTCCAGGACGGGGACCACTG...AGGGCCCTTCAGACCCCAGCTGTCTGCGCGTCTGACTCTTGTGGCCTCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp CCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCGTGAGTACCGGGGGCTaGACCTGCCACTCCCATGTC +
Preference number: 4 (lower is better)
Translates to: PIAGLGQVRQTSEVSSRSVSTGG*TCHSHV
Trigger: GACATGGGAGTGGCAGGTGCAGCCCCCGGTACTCAC...GCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR CCA 90 bp GGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGCCATTGCTGCGGCTGTaGGCCAGAAGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GSGGSARWTASFSSRRSRPLLRL*ARRERE
Trigger: TTCTCTTTCTCTTCTGGCCCACAGCCGCAGCAATGG...CCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTGCACTCGGAGCCCACTaGGTACTCGTCCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: RWFRQVDSLFQQPSLQVSALGAH*VLVLLA
Trigger: TGCAAGGAGGACGAGTACCCAGTGGGCTCCGAGTGC...AGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GGCCCCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTACGCTGGGTCACACATTTaGCACTGCAGACACTTGCTT +
Preference number: 4 (lower is better)
Translates to: GPRPSLAHGNGTWRPQLYAGSHI*HCRHLL
Trigger: AAGCAAGTGTCTGCAGTGCCAAATGTGTGACCCAGC...GTAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTGCAGAGTCTGTGGGCGCAGGCCCATGGCTaGGTCACACATTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: LSAAVAPGISGVGVQSLWAQAHG*VTHLAL
Trigger: CAGTGCCAAATGTGTGACCCAGCCATGGGCCTGCGC...CCACAGACTCTGCACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp TCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCAGTGGTCCCCGTCCTaGACGATGCAGAAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SARWTASFSSRRSRYLWRQWSPS*TMQKWP
Trigger: AGGCCACTTCTGCATCGTCCAGGACGGGGACCACTG...ACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTGAACCACCATACCCAGTaGGAGCTGCTGGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGQPLSAAVAPGISGVGVNHHTQ*ELLVPA
Trigger: AGCTGGGACCAGCAGCTCCCACTGGGTATGGTGGTT...CACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp TCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTGAGTCTGTGGGTCAGTaGTTTGGGCTCCTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SARWTASFSSRRSRYLWRESVGQ*FGLLPV
Trigger: CACGGGGAGGAGCCCAAACCACTGACCCACAGACTC...ACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp TTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGGGGGTGCAGAGTCTGTaGGTCAGTGGTTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FRQVDSLFQQPSLQVSLAGVQSL*VSGLGS
Trigger: GGAGCCCAAACCACTGACCCACAGACTCTGCACCCC...CGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTGGTGGTTCCGCCAGGTaGACAGCCTCTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RWTASFSSRRSRYLWRRGGGSAR*TASFSS
Trigger: GCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACC...ACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACCCAGCCCGCGGATGCAGCAGGTaGCTGGTGACCGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: DKSDRPLRSHPGAATNPARGCSR*LVTEAR
Trigger: TCTGGCCTCGGTCACCAGCCACCTGCTGCATCCGCG...GGCTGGGTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR TCA 90 bp AGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTCACTTGGTCTGGTGCTaGCATTCCTCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RWTASFSSRRSRYLWRRGHLVWC*HSSRVP
Trigger: TGGGACCCTGGAGGAATGTCAGCACCAGACCAAGTG...ACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp TTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGCGGTGTGACAAGCTGTaGCTCAGAACCCGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FRQVDSLFQQPSLQVSLARCDKL*LRTRAA
Trigger: TGCTGCTCGGGTTCTGAGGCACAGCTTGTCACACCG...CGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp TCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCACGATAACCTGGACTaGACTTGGGGCAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: SARWTASFSSRRSRYLWRHDNLD*TWGSTR
Trigger: CCGAGTGCTGCCCCAAGTGCAGTCCAGGTTATCGTG...ACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp GACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACCCAGCCGTGAGTACCGGGGGCTaGACCTGCCACTCCCATGTC +
Preference number: 4 (lower is better)
Translates to: DKSDRPLRSHPGAATNPAVSTGG*TCHSHV
Trigger: GACATGGGAGTGGCAGGTGCAGCCCCCGGTACTCAC...GGCTGGGTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR CCA 90 bp GGGCTGGGTGTGTGGTCTGTGAGCGAGGGGCAACTGGCGCTCCTCCTCAGGACTCTTCACACGATAACCTaGACTGCACTTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLGVWSVSEGQLALLLRTLHTIT*TALGAA
Trigger: TGCTGCCCCAAGTGCAGTCCAGGTTATCGTGTGAAG...AGTCCTGAGGAGGAGCGCCAGTTGCCCCTCGCTCACAGACCACACACCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCAGGCCCTCACTGGCCCATGGGAATGGCACGTGGCGTCCCCAGCTCTACCCCAGCTGGGTCACACATTTaGCACTGCAGACACTTGCTT +
Preference number: 4 (lower is better)
Translates to: PGPHWPMGMARGVPSSTPAGSHI*HCRHLL
Trigger: AAGCAAGTGTCTGCAGTGCCAAATGTGTGACCCAGC...TGGGGTAGAGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGTGAGGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTGCCAGCCAGCTGCACTTaGTCTGGTGCTGACATTCCT +
Preference number: 4 (lower is better)
Translates to: GGQPLSAAVAPGISGVGVPASCT*SGADIP
Trigger: AGGAATGTCAGCACCAGACCAAGTGCAGCTGGCTGG...CACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACCGCGGATGCAGCAGGTaGCTGGTGACCGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GLDKSDRPLRSHPGAATNRGCSR*LVTEAR
Trigger: TCTGGCCTCGGTCACCAGCCACCTGCTGCATCCGCG...GTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR TCA 90 bp CGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTACCCAGCTAGCAGGATaGACTCCAGCAGAGGAACTC +
Preference number: 4 (lower is better)
Translates to: RWFRQVDSLFQQPSLQVSTQLAG*TPAEEL
Trigger: GAGTTCCTCTGCTGGAGTTCATCCTGCTAGCTGGGT...AGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp TTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGGATGACGAGGCTCCCTaGGAGAAACCACCATACCCA +
Preference number: 4 (lower is better)
Translates to: FRQVDSLFQQPSLQVSLADDEAP*EKPPYP
Trigger: TGGGTATGGTGGTTTCTCTCAGGGAGCCTCGTCATC...CGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp TCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTTTGGGCTCCTCCCCGTaGATGAGGGTATTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SARWTASFSSRRSRYLWRLGSSP*MRVLSP
Trigger: AGGAGACAATACCCTCATTCACGGGGAGGAGCCCAA...ACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp CCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCAGTCAGACAGACCTCTaGGGTCTCATCCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PIAGLGQVRQTSEVSSRSSQTDL*GLIPEL
Trigger: CAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACT...GCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR TCA 90 bp CTCCCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGTCAGACAGACCTCTaGGGTCTCATCCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPIAGLGQVRQTSEVSSRSQTDL*GLIPEL
Trigger: CAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACT...CCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR CCA 90 bp GGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTGCCATTGCTGCGGCTGTaGGCCAGAAGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GGQPLSAAVAPGISGVGVPLLRL*ARRERE
Trigger: TTCTCTTTCTCTTCTGGCCCACAGCCGCAGCAATGG...CACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTTCAAGACGTCGGTTTTaGGGGTGGATCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RWFRQVDSLFQQPSLQVSSRRRF*GWISRE
Trigger: CTCCCTGGAGATCCACCCCCAAAACCGACGTCTTGA...AGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CTCCCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGCCCCATAGCCGGGCTTaGACAAGTCAGACAGACCTC +
Preference number: 4 (lower is better)
Translates to: LPIAGLGQVRQTSEVSSRPHSRA*TSQTDL
Trigger: GAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGG...CCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR TCA 90 bp GCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCTTCTTTTCACACATATaGTTAGGCCAACTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: APKPPGSGGSARWTASFSFFSHI*LGQLWS
Trigger: GCTCCACAGTTGGCCTAATCATATGTGTGAAAAGAA...GCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp CTCCCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGCGGAGACGATCACCTTaGCTACATCACCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LPIAGLGQVRQTSEVSSRRRRSP*LHHPLA
Trigger: AGCCAAGGGGTGATGTAGTCAAGGTGATCGTCTCCG...CCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR TCA 90 bp CTCCCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGCAATTGGTCTGGTGCTaGCATTCCTCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LPIAGLGQVRQTSEVSSRQLVWC*HSSRVP
Trigger: TGGGACCCTGGAGGAATGTCAGCACCAGACCAATTG...CCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR CCA 90 bp GACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACCCAGCCCCCCATAGCCGGGCTTaGACAAGTCAGACAGACCTC +
Preference number: 4 (lower is better)
Translates to: DKSDRPLRSHPGAATNPAPHSRA*TSQTDL
Trigger: GAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGG...GGCTGGGTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR CCA 90 bp ATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCTGTTTTCAAAGATGTaGCACCGGGCGGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: IAGLGQVRQTSEVSSRSCLFSKM*HRAAQD
Trigger: GTCCTGGGCCGCCCGGTGCCACATCTTTGAAAACAG...GCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629209.1
CDS-3UTR TCA 90 bp ATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCAATTGGTCTGGTGCTaGCATTCCTCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: IAGLGQVRQTSEVSSRSCQLVWC*HSSRVP
Trigger: TGGGACCCTGGAGGAATGTCAGCACCAGACCAATTG...GCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR GCA 90 bp GGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACTCTCCCCTCTCCCTCTaGCGTCCTGTCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GLDKSDRPLRSHPGAATNSPLSL*RPVFFA
Trigger: GGCAAAGAAGACAGGACGGCAGAGGGAGAGGGGAGA...GTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629209.1
CDS-3UTR CCA 90 bp AAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCCAGTCTGGGTGGAGCGGCGCTaGGGGACACAGGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KITSDVVSTKHHTAANPVWVERR*GTQVGP
Trigger: AGGGCCCACCTGTGTCCCCCAGCGCCGCTCCACCCA...GACTGGGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACCCAGCCTCTCCACACTTGGCCTaGACGGAGACGATCACCTTG +
Preference number: 4 (lower is better)
Translates to: DKSDRPLRSHPGAATNPASPHLA*TETITL
Trigger: CAAGGTGATCGTCTCCGTCCAGGCCAAGTGTGGAGA...GGCTGGGTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR TCA 90 bp GGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACCGGAGACGATCACCTTaGCTACATCACCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLDKSDRPLRSHPGAATNRRRSP*LHHPLA
Trigger: AGCCAAGGGGTGATGTAGTCAAGGTGATCGTCTCCG...GTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR GCA 90 bp CCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCCCGTCCTGTCTTCTTTaGCCAGCCTCTCCTTATTTC +
Preference number: 4 (lower is better)
Translates to: PIAGLGQVRQTSEVSSRSPSCLL*PASPYF
Trigger: GAAATAAGGAGAGGCTGGGCAAAGAAGACAGGACGG...GCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629209.1
CDS-3UTR CCA 90 bp TTTAGAAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCGCCTCCGGGCTCCGGTaGTTCCGCCAGGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: FRKSLPMWYPLNTTLQPTASGLR*FRQVDS
Trigger: GCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGC...GGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTTCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCCAGTCGCCCCAGGCCCTCACTaGCCCATGGGAATGGCACGT +
Preference number: 4 (lower is better)
Translates to: KITSDVVSTKHHTAANPVAPGPH*PMGMAR
Trigger: ACGTGCCATTCCCATGGGCCAGTGAGGGCCTGGGGC...GACTGGGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp GGGCTGGGTGTGTGGTCTGTGAGCGAGGGGCAACTGGCGCTCCTCCTCAGGACTAAATCACTTCCGATGTaGTATCCACTAAACACCACA +
Preference number: 4 (lower is better)
Translates to: GLGVWSVSEGQLALLLRTKSLPM*YPLNTT
Trigger: TGTGGTGTTTAGTGGATACCACATCGGAAGTGATTT...AGTCCTGAGGAGGAGCGCCAGTTGCCCCTCGCTCACAGACCACACACCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp CCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCCATCGTCAACATCATTaGTTTCTCCACACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PIAGLGQVRQTSEVSSRSHRQHH*FLHTWP
Trigger: AGGCCAAGTGTGGAGAAATCAATGATGTTGACGATG...GCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR CCA 90 bp AAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCCAGTCTCGCGCGCAGGCCCATaGCTGGGTCACACATTTGGC +
Preference number: 4 (lower is better)
Translates to: KITSDVVSTKHHTAANPVSRAGP*LGHTFG
Trigger: GCCAAATGTGTGACCCAGCCATGGGCCTGCGCGCGA...GACTGGGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCCAGTCAACCTGGACTGCACTTaGGGCAGCACTCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KITSDVVSTKHHTAANPVNLDCT*GSTRSP
Trigger: TGGGCTCCGAGTGCTGCCCCAAGTGCAGTCCAGGTT...GACTGGGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGCGGCGTTCTCTGTCCTaGAGCAGTTCCGGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: PPTASPQIHCFMTNRKQERRSLS*SSSGSR
Trigger: GCGCGAGCCGGAACTGCTCCAGGACAGAGAACGCCG...CTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp TTTAGAAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCCCTCCAGGGTCCCATTaGGAGAGAAGGTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FRKSLPMWYPLNTTLQPTPPGSH*ERRSPG
Trigger: CCCCGGGGACCTTCTCTCCCAATGGGACCCTGGAGG...GGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCCAGTCGAGTCTGTGGGTCAGTaGTTTGGGCTCCTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: KITSDVVSTKHHTAANPVESVGQ*FGLLPV
Trigger: CACGGGGAGGAGCCCAAACCACTGACCCACAGACTC...GACTGGGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp TTTAGAAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCATACCCAGTGGGAGCTaGTGGTCCCAGCTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: FRKSLPMWYPLNTTLQPTIPSGS*WSQLRP
Trigger: AGGCCGGAGCTGGGACCAGCAGCTCCCACTGGGTAT...GGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTTCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGCCGAATTCAAATCCACTCAGGCCTGCTGGGTaGAGCGGCGCTGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PQIHCFMTNRKQEPNSNPLRPAG*SGAGGH
Trigger: GTGTCCCCCAGCGCCGCTCCACCCAGCAGGCCTGAG...TGGATTTGAATTCGGCTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGCCGAATTCAAATCCAGCCTCCGGGCTCCGGTaGTTCCGCCAGGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: PQIHCFMTNRKQEPNSNPASGLR*FRQVDS
Trigger: GCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGC...TGGATTTGAATTCGGCTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp CCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGACTGGCCCATGGGAATaGCACGTGGCGTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPTASPQIHCFMTNRKQETGPWE*HVASPA
Trigger: AGCTGGGGACGCCACGTGCCATTCCCATGGGCCAGT...CTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp GACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACCCAGCCTTCTTTTCACACATATaGTTAGGCCAATTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DKSDRPLRSHPGAATNPAFFSHI*LGQLVW
Trigger: CCAGACCAATTGGCCTAATCATATGTGTGAAAAGAA...GGCTGGGTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR TCA 90 bp CACCTCCCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCTTCTTTTCACACATATaGTTAGGCCAATTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HLPIAGLGQVRQTSEVSSFFSHI*LGQLVW
Trigger: CCAGACCAATTGGCCTAATCATATGTGTGAAAAGAA...GGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGGGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR CCA 90 bp TTTAGAAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCTGGACGATGCAGAAGTaGCCTGGGCTGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: FRKSLPMWYPLNTTLQPTWTMQK*PGLQPH
Trigger: GTGTGGCTGCAGCCCAGGCCACTTCTGCATCGTCCA...GGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTTCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp TTTAGAAAATCACTTCCGATGTGGTATCCACTAAACACCACACTGCAGCCAACCGGGGTGCAGAGTCTGTaGGTCAGTGGTTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FRKSLPMWYPLNTTLQPTGVQSL*VSGLGS
Trigger: GGAGCCCAAACCACTGACCCACAGACTCTGCACCCC...GGTTGGCTGCAGTGTGGTGTTTAGTGGATACCACATCGGAAGTGATTTTCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp CCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGGAATCCGCCTCGGTGTaGCAAGCTGTGCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PPTASPQIHCFMTNRKQEESASV*QAVPQN
Trigger: GTTCTGAGGCACAGCTTGTCACACCGAGGCGGATTC...CTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp CCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGCGGAGACGATCACCTTaGCTACATCACCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PPTASPQIHCFMTNRKQERRRSP*LHHPLA
Trigger: AGCCAAGGGGTGATGTAGTCAAGGTGATCGTCTCCG...CTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp GGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACACATTCAACAGCTACTaGGTGGACAAGCTTAAATTA +
Preference number: 4 (lower is better)
Translates to: GLDKSDRPLRSHPGAATNTFNSY*VDKLKL
Trigger: TAATTTAAGCTTGTCCACTCAGTAGCTGTTGAATGT...GTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629209.1
CDS-3UTR CCA 90 bp CCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGCCAGCCAGCTGCACTTaGTCTGGTGCTGACATTCCT +
Preference number: 4 (lower is better)
Translates to: PPTASPQIHCFMTNRKQEPASCT*SGADIP
Trigger: AGGAATGTCAGCACCAGACCAAGTGCAGCTGGCTGG...CTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AAGATATTTACATCCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAAAGACGCGCAGACAGCTaGGGTCTGAAGGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KIFTSSHSISPNTLFHDKRRADS*GLKGPL
Trigger: CAGAGGGCCCTTCAGACCCCAGCTGTCTGCGCGTCT...TTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGGATGTAAATATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp CCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGCCGAATTCAAATCCAAGAAGTGGCCTGGGCTaGAGCCACACACGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: PQIHCFMTNRKQEPNSNPRSGLG*SHTRRS
Trigger: AGAACGCCGTGTGTGGCTGCAGCCCAGGCCACTTCT...TGGATTTGAATTCGGCTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp CCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGCCGAATTCAAATCCAGCTCCTCCCCGTGAATaGGGGTATTGTCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PQIHCFMTNRKQEPNSNPAPPRE*GYCLLH
Trigger: GTGGAGGAGACAATACCCTCATTCACGGGGAGGAGC...TGGATTTGAATTCGGCTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR GCA 90 bp CCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGCCGAATTCAAATCCACGGTGTGACAAGCTGTaGCTCAGAACCCGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PQIHCFMTNRKQEPNSNPRCDKL*LRTRAA
Trigger: TGCTGCTCGGGTTCTGAGGCACAGCTTGTCACACCG...TGGATTTGAATTCGGCTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp AAGATATTTACATCCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAAACTTGCTTAGGCCATTaGGGTGGGCAATGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: KIFTSSHSISPNTLFHDKTCLGH*GGQCRC
Trigger: GCACCTACATTGCCCACCTCAATGGCCTAAGCAAGT...TTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGGATGTAAATATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CCA 90 bp AAGATATTTACATCCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAATCCTGTCTTTTCCGCTaGACGGAGACGATCACCTTG +
Preference number: 4 (lower is better)
Translates to: KIFTSSHSISPNTLFHDKSCLFR*TETITL
Trigger: CAAGGTGATCGTCTCCGTCCAGCGGAAAAGACAGGA...TTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGGATGTAAATATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR TCA 90 bp CCTCCCACAGCATCTCCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGTTCTTTTCACACATATaGTTAGGCCAACTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PPTASPQIHCFMTNRKQEFFSHI*LGQLWS
Trigger: GCTCCACAGTTGGCCTAATCATATGTGTGAAAAGAA...CTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGGAGATGCTGTGGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS GCA 90 bp GCTCAGGCCCTGCCCCCAGGTGTGCCGTCAGCCCTGTCCCGCAGGTaGAGTCCTGCCTGGCCGCAGGGAGCACTGGCCATGCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: AQALPPGVPSALSRR*SPAWPQGALAMLSL
Trigger: CAGGCTCAGCATGGCCAGTGCTCCCTGCGGCCAGGCAGGACTGCACCTGCGGGACAGGGCTGACGGCACACCTGGGGGCAGGGCCTGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000442392.6
ENST00000463471.6
ENST00000466750.5
ENST00000625292.2
ENST00000626042.2
ENST00000630160.2
CDS CCA 90 bp GACTCTCGGTGCCTCCCTTCTGCACCCTCTGGCCCGGGCTGGAGGTaGCGTAAGCGCGGCACGCGGCGCAGTGGTCCCCGTCCTGGACGA +
Preference number: 5 (lower is better)
Translates to: DSRCLPSAPSGPGWR*RKRGTRRSGPRPGR
Trigger: TCGTCCAGGACGGGGACCACTGCGCCGCGTGCCGCGCTTACGCCACCTCCAGCCCGGGCCAGAGGGTGCAGAAGGGAGGCACCGAGAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000451778.5
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000496064.5
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000625695.2
ENST00000626465.2
ENST00000627750.1
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS GCA 90 bp CCTGCCCCCAGGTGTGCCGTCAGCCCTGTCCCGCAGGTGCAGTCCTaGCTGGCCGCAGGGAGCACTGGCCATGCTGAGCCTGGCATGAGG +
Preference number: 5 (lower is better)
Translates to: PAPRCAVSPVPQVQS*LAAGSTGHAEPGMR
Trigger: CCTCATGCCAGGCTCAGCATGGCCAGTGCTCCCTGCGGCCAGGCAGGACTGCACCTGCGGGACAGGGCTGACGGCACACCTGGGGGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000442392.6
ENST00000463471.6
ENST00000466750.5
ENST00000625292.2
ENST00000626042.2
ENST00000630160.2
CDS GCA 90 bp CTGGGAGGGGTGGAAGGGCAGCTCTTGCTCCCCCTGCAGAGACGCTaGGCGGACTGGGAAGGCTGCCAGCCTCGCCCGGTCTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LGGVEGQLLLPLQRR*ADWEGCQPRPVSLW
Trigger: CCACAGGGAGACCGGGCGAGGCTGGCAGCCTTCCCAGTCCGCGCAGCGTCTCTGCAGGGGGAGCAAGAGCTGCCCTTCCACCCCTCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435221.6
ENST00000629542.2
CDS CCA 90 bp TGTCCTGACTCTCGGTGCCTCCCTTCTGCACCCTCTGGCCCGGGCTaGAGGTGGCGTAAGCGCGGCACGCGGCGCAGTGGTCCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: CPDSRCLPSAPSGPG*RWRKRGTRRSGPRP
Trigger: AGGACGGGGACCACTGCGCCGCGTGCCGCGCTTACGCCACCTCCAGCCCGGGCCAGAGGGTGCAGAAGGGAGGCACCGAGAGTCAGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000451778.5
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000496064.5
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000625695.2
ENST00000626465.2
ENST00000627750.1
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS CCA 90 bp GTGGAAGGGCAGCTCTTGCTCCCCCTGCAGAGACGCTGCGCGGACTaGGAAGGCTGCCAGCCTCGCCCGGTCTCCCTGTGGACCCTGCCC +
Preference number: 5 (lower is better)
Translates to: VEGQLLLPLQRRCAD*EGCQPRPVSLWTLP
Trigger: GGGCAGGGTCCACAGGGAGACCGGGCGAGGCTGGCAGCCTTCCCAGTCCGCGCAGCGTCTCTGCAGGGGGAGCAAGAGCTGCCCTTCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435221.6
ENST00000629542.2
CDS-3UTR CAA 90 bp CCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGAGGAACTCAGCGCCATaGCTGCGGCTGTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: PRAEPPSLRAPVVPPGGQRNSAP*LRLWAR
Trigger: TCTGGCCCACAGCCGCAGCAATGGCGCTGAGTTCCT...CTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS CCA 90 bp GCGCGGCACGCGGCGCAGTGGTCCCCGTCCTGGACGATGCAGAAGTaGCCTGGGCTGCAGCCACACACGGCGTTCTCTGTCCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: ARHAAQWSPSWTMQK*PGLQPHTAFSVLEQ
Trigger: CTGCTCCAGGACAGAGAACGCCGTGTGTGGCTGCAGCCCAGGCCACTTCTGCATCGTCCAGGACGGGGACCACTGCGCCGCGTGCCGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000451778.5
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000496064.5
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000625695.2
ENST00000626465.2
ENST00000627750.1
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS TCA 90 bp CCCGCAGGTGCAGTCCTGCCTGGCCGCAGGGAGCACTGGCCATGCTaGGCCTGGCATGAGGCTCCAAGGGGACAGAGCCGTTGGCCGCAT +
Preference number: 5 (lower is better)
Translates to: PAGAVLPGRREHWPC*AWHEAPRGQSRWPH
Trigger: ATGCGGCCAACGGCTCTGTCCCCTTGGAGCCTCATGCCAGGCTCAGCATGGCCAGTGCTCCCTGCGGCCAGGCAGGACTGCACCTGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000442392.6
ENST00000463471.6
ENST00000466750.5
ENST00000625292.2
ENST00000626042.2
ENST00000630160.2
CDS GCA 90 bp CCAGGGCGCCCTGCCAGGCTGAACCCCTGGCTCAGCCAAACGAGGTaGCCAGAGGTACCCAGCATGGAGGACCTGAGGCCGGGAGGGACA +
Preference number: 5 (lower is better)
Translates to: PGRPARLNPWLSQTR*PEVPSMEDLRPGGT
Trigger: TGTCCCTCCCGGCCTCAGGTCCTCCATGCTGGGTACCTCTGGGCACCTCGTTTGGCTGAGCCAGGGGTTCAGCCTGGCAGGGCGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000627750.1
ENST00000630160.2
CDS-3UTR CAA 90 bp CCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGGGCTGGGTCACACATTaGGCACTGCAGACACTTGCT +
Preference number: 5 (lower is better)
Translates to: PAQGGAPKPPGSGGSARWGWVTH*ALQTLA
Trigger: AGCAAGTGTCTGCAGTGCCAAATGTGTGACCCAGCC...CCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS GCA 90 bp CGGCGCAGTGGTCCCCGTCCTGGACGATGCAGAAGTGGCCTGGGCTaGAGCCACACACGGCGTTCTCTGTCCTGGAGCAGTTCCGGCTCG +
Preference number: 5 (lower is better)
Translates to: RRSGPRPGRCRSGLG*SHTRRSLSWSSSGS
Trigger: CGAGCCGGAACTGCTCCAGGACAGAGAACGCCGTGTGTGGCTGCAGCCCAGGCCACTTCTGCATCGTCCAGGACGGGGACCACTGCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000451778.5
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000496064.5
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000625695.2
ENST00000626465.2
ENST00000627750.1
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS GCA 90 bp TGTCAGTTCCAGGGCAGGGTCCCGCAGGCAGGTCCTCGCCCCACGTaGCCACCCAGACACCCACCCCGCAAACGGGTTTCCCATCTGTGC +
Preference number: 5 (lower is better)
Translates to: CQFQGRVPQAGPRPT*PPRHPPRKRVSHLC
Trigger: GCACAGATGGGAAACCCGTTTGCGGGGTGGGTGTCTGGGTGGGCACGTGGGGCGAGGACCTGCCTGCGGGACCCTGCCCTGGAACTGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS GCA 90 bp CATGGAGGACCTGAGGCCGGGAGGGACACCAAGGGACGGCAGAGCTaGGTGTGGGACGAGGGCTTGCAGGAAGGTCCTGGGAGGGCTTCG +
Preference number: 5 (lower is better)
Translates to: HGGPEAGRDTKGRQS*VWDEGLQEGPGRAS
Trigger: CGAAGCCCTCCCAGGACCTTCCTGCAAGCCCTCGTCCCACACGCAGCTCTGCCGTCCCTTGGTGTCCCTCCCGGCCTCAGGTCCTCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000627750.1
ENST00000630160.2
CDS CCA 90 bp GCACGCGGCGCAGTGGTCCCCGTCCTGGACGATGCAGAAGTGGCCTaGGCTGCAGCCACACACGGCGTTCTCTGTCCTGGAGCAGTTCCG +
Preference number: 5 (lower is better)
Translates to: ARGAVVPVLDDAEVA*AAATHGVLCPGAVP
Trigger: CGGAACTGCTCCAGGACAGAGAACGCCGTGTGTGGCTGCAGCCCAGGCCACTTCTGCATCGTCCAGGACGGGGACCACTGCGCCGCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000451778.5
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000496064.5
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000625695.2
ENST00000626465.2
ENST00000627750.1
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS CCA 90 bp GTTCTCTGTCCTGGAGCAGTTCCGGCTCGCGCGCAGGCCCATGGCTaGAGTCCAAGAGGAGGGGCTGAGAGGGGTACGTGGAGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: VLCPGAVPARAQAHG*SPRGGAERGTWRPG
Trigger: TCCCGGCCTCCACGTACCCCTCTCAGCCCCTCCTCTTGGACTCCAGCCATGGGCCTGCGCGCGAGCCGGAACTGCTCCAGGACAGAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000627750.1
ENST00000630160.2
CDS-3UTR CAA 90 bp CGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCATCCTCCAGGGTCCCATaGGGAGAGAAGGTCCCCGGG +
Preference number: 5 (lower is better)
Translates to: RAPVVPPGGQPLSAAVAPSSRVP*GEKVPG
Trigger: CCCGGGGACCTTCTCTCCCAATGGGACCCTGGAGGA...TGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CAA 90 bp GGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGCAACCCAGTCCAGCCTaGGCTGTGAGGCAGTGCCCG +
Preference number: 5 (lower is better)
Translates to: GSGGSARWTASFSSRRSRQPSPA*AVRQCP
Trigger: CGGGCACTGCCTCACAGCCAAGGCTGGACTGGGTTG...CCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS TCA 90 bp GGCTCAGCCAAACGAGGTGCCCAGAGGTACCCAGCATGGAGGACCTaGGGCCGGGAGGGACACCAAGGGACGGCAGAGCTGCGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: GSAKRGAQRYPAWRT*GREGHQGTAELRVG
Trigger: TCCCACACGCAGCTCTGCCGTCCCTTGGTGTCCCTCCCGGCCTCAGGTCCTCCATGCTGGGTACCTCTGGGCACCTCGTTTGGCTGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000627750.1
ENST00000630160.2
CDS TCA 90 bp CAGCATCCACAGGCCAAGGACTGCTGCCAGGGCGCCCTGCCAGGCTaGACCCCTGGCTCAGCCAAACGAGGTGCCCAGAGGTACCCAGCA +
Preference number: 5 (lower is better)
Translates to: QHPQAKDCCQGALPG*TPGSAKRGAQRYPA
Trigger: TGCTGGGTACCTCTGGGCACCTCGTTTGGCTGAGCCAGGGGTTCAGCCTGGCAGGGCGCCCTGGCAGCAGTCCTTGGCCTGTGGATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000627750.1
ENST00000630160.2
CDS CCA 90 bp TGCAGAAGTGGCCTGGGCTGCAGCCACACACGGCGTTCTCTGTCCTaGAGCAGTTCCGGCTCGCGCGCAGGCCCATGGCTGGGTCACACA +
Preference number: 5 (lower is better)
Translates to: CRSGLGCSHTRRSLS*SSSGSRAGPWLGHT
Trigger: TGTGTGACCCAGCCATGGGCCTGCGCGCGAGCCGGAACTGCTCCAGGACAGAGAACGCCGTGTGTGGCTGCAGCCCAGGCCACTTCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000451778.5
ENST00000496064.5
ENST00000621877.3
ENST00000625695.2
ENST00000626465.2
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000631202.2
CDS CCA 90 bp GGACCTGAGGCCGGGAGGGACACCAAGGGACGGCAGAGCTGCGTGTaGGACGAGGGCTTGCAGGAAGGTCCTGGGAGGGCTTCGTTGATG +
Preference number: 5 (lower is better)
Translates to: GPEAGRDTKGRQSCV*DEGLQEGPGRASLM
Trigger: CATCAACGAAGCCCTCCCAGGACCTTCCTGCAAGCCCTCGTCCCACACGCAGCTCTGCCGTCCCTTGGTGTCCCTCCCGGCCTCAGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS CCA 90 bp ACAGGCCAAGGACTGCTGCCAGGGCGCCCTGCCAGGCTGAACCCCTaGCTCAGCCAAACGAGGTGCCCAGAGGTACCCAGCATGGAGGAC +
Preference number: 5 (lower is better)
Translates to: TGQGLLPGRPARLNP*LSQTRCPEVPSMED
Trigger: GTCCTCCATGCTGGGTACCTCTGGGCACCTCGTTTGGCTGAGCCAGGGGTTCAGCCTGGCAGGGCGCCCTGGCAGCAGTCCTTGGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000627750.1
ENST00000630160.2
CDS CCA 90 bp TGCAGAAGTGGCCTGGGCTGCAGCCACACACGGCGTTCTCTGTCCTaGAGCAGTTCCGGCTCGCGCGCAGGCCCATGGCTGGAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: CRSGLGCSHTRRSLS*SSSGSRAGPWLESK
Trigger: CTTGGACTCCAGCCATGGGCCTGCGCGCGAGCCGGAACTGCTCCAGGACAGAGAACGCCGTGTGTGGCTGCAGCCCAGGCCACTTCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000627750.1
ENST00000630160.2
CDS-3UTR CAA 90 bp AGACGGAAGCCAGCCCAGGGCGGAGCCCCCAAGCCTCCGGGCTCCGGTGGTTCCACGGAGACGATCACCTaGACTACATCACCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: RRKPAQGGAPKPPGSGGSTETIT*TTSPLG
Trigger: GCCAAGGGGTGATGTAGTCAAGGTGATCGTCTCCGT...GGAACCACCGGAGCCCGGAGGCTTGGGGGCTCCGCCCTGGGCTGGCTTCCGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS GCA 90 bp CTGGGCCCATGGAAGGGGTTATCTGGGGCACACAGGCTTCAGCCCTaGAGCTCTCCTGGACGCAGGCATGTGACCAGGGTGCCGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LGPWKGLSGAHRLQP*SSPGRRHVTRVPLR
Trigger: CCTGAGCGGCACCCTGGTCACATGCCTGCGTCCAGGAGAGCTGCAGGGCTGAAGCCTGTGTGCCCCAGATAACCCCTTCCATGGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS GCA 90 bp AGGACGGCAGAGGGAGAGGGGAGAGAAGCGGGAGGCAGCCAGCAGTaGAGAGACCCCAGAGCACGGGAGACCAGTGGCAGACAAGGACAG +
Preference number: 5 (lower is better)
Translates to: RTAEGEGREAGGSQQ*RDPRARETSGRQGQ
Trigger: CTGTCCTTGTCTGCCACTGGTCTCCCGTGCTCTGGGGTCTCTGCACTGCTGGCTGCCTCCCGCTTCTCTCCCCTCTCCCTCTGCCGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS CCA 90 bp CTCGGAGCCCACTGGGTACTCGTCCTCCTTGCAGGACGGCAGAGCTaGGGCGTAGCAGGGGGCTCCCAGGAAGGTGAGATACAGCACCAG +
Preference number: 5 (lower is better)
Translates to: LGAHWVLVLLAGRQS*GVAGGSQEGEIQHQ
Trigger: CTGGTGCTGTATCTCACCTTCCTGGGAGCCCCCTGCTACGCCCCAGCTCTGCCGTCCTGCAAGGAGGACGAGTACCCAGTGGGCTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000442392.6
ENST00000451778.5
ENST00000463471.6
ENST00000482074.6
ENST00000496064.5
ENST00000621877.3
ENST00000625516.2
ENST00000625695.2
ENST00000626042.2
ENST00000626465.2
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS CCA 90 bp CGGAGAGTCCCAGCACCATCCCATTCCACTTTGCAGCTAGGGACGTaGGCACAGGAGAGGTCTGGGCACCCACCCCGGGCACCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: RRVPAPSHSTLQLGT*AQERSGHPPRAPEE
Trigger: CTCCTCTGGTGCCCGGGGTGGGTGCCCAGACCTCTCCTGTGCCCACGTCCCTAGCTGCAAAGTGGAATGGGATGGTGCTGGGACTCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000482074.6
ENST00000625292.2
ENST00000625516.2
ENST00000630160.2
CDS-3UTR CAA 90 bp GCTGGGTGTGTGGTCTGTGAGCGAGGGGCAACTGGCGCTCCTCCTCAGGACTCTGGGTACTCGTCCTCCTaGCAGGACGGCAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: AGCVVCERGATGAPPQDSGYSSS*QDGRAG
Trigger: CCCAGCTCTGCCGTCCTGCAAGGAGGACGAGTACCC...AGAGTCCTGAGGAGGAGCGCCAGTTGCCCCTCGCTCACAGACCACACACCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CAA 90 bp CCTGCTGAGGCCACAAGAGTCAGACGCGCAGACAGCTGGGGTCTGAAGGGCCCTTCCTCCAGGGTCCCATaGGGAGAGAAGGTCCCCGGG +
Preference number: 5 (lower is better)
Translates to: PAEATRVRRADSWGLKGPSSRVP*GEKVPG
Trigger: CCCGGGGACCTTCTCTCCCAATGGGACCCTGGAGGA...AGGGCCCTTCAGACCCCAGCTGTCTGCGCGTCTGACTCTTGTGGCCTCAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS TCA 90 bp ATGCCTCAGGCTCAGACCGGCAGCTCGGGAACCCAGCTAGCAGGATaGACTCCAGCAGAGGAACTCAGCGCCATTGCTGCGGCCGTCCCC +
Preference number: 5 (lower is better)
Translates to: MPQAQTGSSGTQLAG*TPAEELSAIAAAVP
Trigger: GGGGACGGCCGCAGCAATGGCGCTGAGTTCCTCTGCTGGAGTTCATCCTGCTAGCTGGGTTCCCGAGCTGCCGGTCTGAGCCTGAGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451778.5
ENST00000629075.2
CDS TCA 90 bp GCGTGTGGGACGAGGGCTTGCAGGAAGGTCCTGGGAGGGCTTCGTTaGTGGGAGAAACCAGCCTTCTGCCCAGATGGGCAGGACGCCGAG +
Preference number: 5 (lower is better)
Translates to: ACGTRACRKVLGGLR*WEKPAFCPDGQDAE
Trigger: CTCGGCGTCCTGCCCATCTGGGCAGAAGGCTGGTTTCTCCCATCAACGAAGCCCTCCCAGGACCTTCCTGCAAGCCCTCGTCCCACACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS TCA 90 bp GGGCACACAGGCTTCAGCCCTGCAGCTCTCCTGGACGCAGGCATGTaGCCAGGGTGCCGCTCAGGGTGGGACCTTCAAGCCTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: GHTGFSPAALLDAGM*PGCRSGWDLQAFLL
Trigger: CAGCAGAAAGGCTTGAAGGTCCCACCCTGAGCGGCACCCTGGTCACATGCCTGCGTCCAGGAGAGCTGCAGGGCTGAAGCCTGTGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS-3UTR CAA 90 bp GCCCCCAAGCCTCCGGGCTCCGGTGGTTCCGCCAGGTGGACAGCCTCTTTCAGCTGGCACTGCAGACACTaGCTTAGGCCATTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: APKPPGSGGSARWTASFSWHCRH*LRPLRW
Trigger: CCACCTCAATGGCCTAAGCAAGTGTCTGCAGTGCCA...GCTGAAAGAGGCTGTCCACCTGGCGGAACCACCGGAGCCCGGAGGCTTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CAA 90 bp TCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCAACCCAGTCCAGCCTaGGCTGTGAGGCAGTGCCCG +
Preference number: 5 (lower is better)
Translates to: SARWTASFSSRRSRYLWRQPSPA*AVRQCP
Trigger: CGGGCACTGCCTCACAGCCAAGGCTGGACTGGGTTG...ACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS TCA 90 bp ATGCCTCAGGCTCAGACCGGCAGCTCGGGAACCCAGCTAGCAGGATaGACTCCAGCAGAGGAACTCAGCGCCATTGCTGCGGCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: MPQAQTGSSGTQLAG*TPAEELSAIAAAVG
Trigger: GCCCACAGCCGCAGCAATGGCGCTGAGTTCCTCTGCTGGAGTTCATCCTGCTAGCTGGGTTCCCGAGCTGCCGGTCTGAGCCTGAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000355716.5
ENST00000442392.6
ENST00000463471.6
ENST00000482074.6
ENST00000496064.5
ENST00000621877.3
ENST00000625516.2
ENST00000626042.2
ENST00000626465.2
ENST00000630160.2
CDS TCA 90 bp GGGTGCAGAGTCTGTGGGTCAGTGGTTTGGGCTCCTCCCCGTGAATaGGGGTATTGTCTCCTCCACGGCCACCGTGGTGACGTCCGGAGG +
Preference number: 5 (lower is better)
Translates to: GCRVCGSVVWAPPRE*GYCLLHGHRGDVRR
Trigger: CCTCCGGACGTCACCACGGTGGCCGTGGAGGAGACAATACCCTCATTCACGGGGAGGAGCCCAAACCACTGACCCACAGACTCTGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000355716.5
ENST00000463471.6
ENST00000463835.5
ENST00000466750.5
ENST00000475523.5
ENST00000480305.1
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000627817.2
ENST00000629696.1
ENST00000630160.2
CDS TCA 90 bp ATGCCTCAGGCTCAGACCGGCAGCTCGGGAACCCAGCTAGCAGGATaGACTCCAGCAGAGGAACTCAGCGCCATTGCTGCGGCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: MPQAQTGSSGTQLAG*TPAEELSAIAAAPV
Trigger: CACAGGCGCCGCAGCAATGGCGCTGAGTTCCTCTGCTGGAGTTCATCCTGCTAGCTGGGTTCCCGAGCTGCCGGTCTGAGCCTGAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426449.5
ENST00000628337.2
CDS GCA 90 bp GGTATTGTCTCCTCCACGGCCACCGTGGTGACGTCCGGAGGGGCCTaGAGGGCCTCAATGACTGTGGCCTCACCTTCTGCCTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: GIVSSTATVVTSGGA*RASMTVASPSASCL
Trigger: AAGACAGGAGGCAGAAGGTGAGGCCACAGTCATTGAGGCCCTGCAGGCCCCTCCGGACGTCACCACGGTGGCCGTGGAGGAGACAATACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000355716.5
ENST00000463471.6
ENST00000463835.5
ENST00000466750.5
ENST00000475523.5
ENST00000480305.1
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000627817.2
ENST00000629696.1
ENST00000630160.2
CDS CCA 90 bp CACACGATAACCTGGACTGCACTTGGGGCAGCACTCGGAGCCCACTaGGTACTCGTCCTCCTTGCAGGACGGCAGAGCTGGGGCGTAGCA +
Preference number: 5 (lower is better)
Translates to: HTITWTALGAALGAH*VLVLLAGRQSWGVA
Trigger: TGCTACGCCCCAGCTCTGCCGTCCTGCAAGGAGGACGAGTACCCAGTGGGCTCCGAGTGCTGCCCCAAGTGCAGTCCAGGTTATCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000442392.6
ENST00000451778.5
ENST00000463471.6
ENST00000482074.6
ENST00000496064.5
ENST00000621877.3
ENST00000625516.2
ENST00000625695.2
ENST00000626042.2
ENST00000626465.2
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS CCA 90 bp GCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTaGCGTCGGGGTGCAGAGTCTGTGGGTCAGTGGTTTGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ARWTASFSSRRSRYL*RRGAESVGQWFGLL
Trigger: GAGGAGCCCAAACCACTGACCCACAGACTCTGCACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000355716.5
ENST00000463471.6
ENST00000463835.5
ENST00000466750.5
ENST00000475523.5
ENST00000480305.1
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000627817.2
ENST00000629696.1
ENST00000630160.2
CDS CCA 90 bp CCTGGGAGGGCTTCGTTGATGGGAGAAACCAGCCTTCTGCCCAGATaGGCAGGACGCCGAGCTTGCACTGTCAGTTCCAGGGCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: PGRASLMGETSLLPR*AGRRACTVSSRAGS
Trigger: GGACCCTGCCCTGGAACTGACAGTGCAAGCTCGGCGTCCTGCCCATCTGGGCAGAAGGCTGGTTTCTCCCATCAACGAAGCCCTCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS CCA 90 bp GGGACGGCAGAGCTGCGTGTGGGACGAGGGCTTGCAGGAAGGTCCTaGGAGGGCTTCGTTGATGGGAGAAACCAGCCTTCTGCCCAGATG +
Preference number: 5 (lower is better)
Translates to: GTAELRVGRGLAGRS*EGFVDGRNQPSAQM
Trigger: CATCTGGGCAGAAGGCTGGTTTCTCCCATCAACGAAGCCCTCCCAGGACCTTCCTGCAAGCCCTCGTCCCACACGCAGCTCTGCCGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS CCA 90 bp GGGAGGCAGCCAGCAGTGCAGAGACCCCAGAGCACGGGAGACCAGTaGCAGACAAGGACAGAAGGTAGAGGGAGAGCCAGTGTCGGGACA +
Preference number: 5 (lower is better)
Translates to: GRQPAVQRPQSTGDQ*QTRTEGRGRASVGT
Trigger: TGTCCCGACACTGGCTCTCCCTCTACCTTCTGTCCTTGTCTGCCACTGGTCTCCCGTGCTCTGGGGTCTCTGCACTGCTGGCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS-3UTR CAA 90 bp CTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTGCAGAGTCTGTGGAGGAACTCAGCGCCATaGCTGCGGCTGTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: LSAAVAPGISGVGVQSLWRNSAP*LRLWAR
Trigger: TCTGGCCCACAGCCGCAGCAATGGCGCTGAGTTCCT...CCACAGACTCTGCACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS TCA 90 bp CAAGGGGACAGAGCCGTTGGCCGCATGGACAGGCTCTGCGCTCAGTaGCTCAAAGGCCACCTCTGGGTCTGGTTCCCCTTTCTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: QGDRAVGRMDRLCAQ*LKGHLWVWFPFLSA
Trigger: GGCAGACAGAAAGGGGAACCAGACCCAGAGGTGGCCTTTGAGTCACTGAGCGCAGAGCCTGTCCATGCGGCCAACGGCTCTGTCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000442392.6
ENST00000463471.6
ENST00000466750.5
ENST00000625292.2
ENST00000626042.2
ENST00000630160.2
CDS TCA 90 bp ATGCCTCAGGCTCAGACCGGCAGCTCGGGAACCCAGCTAGCAGGATaGACTCCAGCAGAGGAACTCAGCGCCATTGCTGCGGCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: MPQAQTGSSGTQLAG*TPAEELSAIAAAPD
Trigger: ATCCGGAGCCGCAGCAATGGCGCTGAGTTCCTCTGCTGGAGTTCATCCTGCTAGCTGGGTTCCCGAGCTGCCGGTCTGAGCCTGAGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434817.5
ENST00000631202.2
CDS GCA 90 bp GCATGTGACCAGGGTGCCGCTCAGGGTGGGACCTTCAAGCCTTTCTaGTGGAGAAGACGGTCATCTCCCAGGGAAGCAACGTGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: ACDQGAAQGGTFKPF*WRRRSSPREATWSP
Trigger: GGGGCTCCACGTTGCTTCCCTGGGAGATGACCGTCTTCTCCAGCAGAAAGGCTTGAAGGTCCCACCCTGAGCGGCACCCTGGTCACATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS CCA 90 bp TGTGACCAGGGTGCCGCTCAGGGTGGGACCTTCAAGCCTTTCTGCTaGAGAAGACGGTCATCTCCCAGGGAAGCAACGTGGAGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: CDQGAAQGGTFKPFC*RRRSSPREATWSPL
Trigger: GAGGGGGCTCCACGTTGCTTCCCTGGGAGATGACCGTCTTCTCCAGCAGAAAGGCTTGAAGGTCCCACCCTGAGCGGCACCCTGGTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS TCA 90 bp ATGCCTCAGGCTCAGACCGGCAGCTCGGGAACCCAGCTAGCAGGATaGACTCCAGCAGAGGAACTCAGCGCCATTGCTGCGGCTCACTCA +
Preference number: 5 (lower is better)
Translates to: MPQAQTGSSGTQLAG*TPAEELSAIAAAHS
Trigger: TGAGTGAGCCGCAGCAATGGCGCTGAGTTCCTCTGCTGGAGTTCATCCTGCTAGCTGGGTTCCCGAGCTGCCGGTCTGAGCCTGAGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409119.5
ENST00000625695.2
CDS TCA 90 bp ATGCCTCAGGCTCAGACCGGCAGCTCGGGAACCCAGCTAGCAGGATaGACTCCAGCAGAGGAACTCAGCGCCATTGCTGCGGACACTCAG +
Preference number: 5 (lower is better)
Translates to: MPQAQTGSSGTQLAG*TPAEELSAIAADTQ
Trigger: CTGAGTGTCCGCAGCAATGGCGCTGAGTTCCTCTGCTGGAGTTCATCCTGCTAGCTGGGTTCCCGAGCTGCCGGTCTGAGCCTGAGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435221.6
ENST00000629542.2
CDS CCA 90 bp CGCTCCAGGTATCTCTGGCGTCGGGGTGCAGAGTCTGTGGGTCAGTaGTTTGGGCTCCTCCCCGTGAATGAGGGTATTGTCTCCTCCACG +
Preference number: 5 (lower is better)
Translates to: RSRYLWRRGAESVGQ*FGLLPVNEGIVSST
Trigger: CGTGGAGGAGACAATACCCTCATTCACGGGGAGGAGCCCAAACCACTGACCCACAGACTCTGCACCCCGACGCCAGAGATACCTGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000355716.5
ENST00000463471.6
ENST00000463835.5
ENST00000466750.5
ENST00000475523.5
ENST00000480305.1
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000627817.2
ENST00000629696.1
ENST00000630160.2
CDS CCA 90 bp TGTCTGATCAGGGGACACAGGCTCATGGCAATGGTCTCACAGCGGTaGCGGAGGCACAACTCCTGCTTCTCCCTGGGAGACCGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: CLIRGHRLMAMVSQR*RRHNSCFSLGDRPQ
Trigger: TTGGGGACGGTCTCCCAGGGAGAAGCAGGAGTTGTGCCTCCGCCACCGCTGTGAGACCATTGCCATGAGCCTGTGTCCCCTGATCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS-3UTR CAA 90 bp TCCGCCAGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCTCAAGACGTCGGTTTaGGGGGTGGATCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: SARWTASFSSRRSRYLWRLKTSV*GVDLQG
Trigger: TCCCTGGAGATCCACCCCCAAAACCGACGTCTTGAG...ACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCTGGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CAA 90 bp AGGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTCTCAAGACGTCGGTTTaGGGGGTGGATCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: RWTASFSSRRSRYLWRRGLKTSV*GVDLQG
Trigger: TCCCTGGAGATCCACCCCCAAAACCGACGTCTTGAG...ACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CAA 90 bp GGTGGACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTGACGGAGACGATCACCTaGACTACATCACCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: GGQPLSAAVAPGISGVGVTETIT*TTSPLG
Trigger: GCCAAGGGGTGATGTAGTCAAGGTGATCGTCTCCGT...CACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS-3UTR CAA 90 bp AGATGTGGCACCGGGCGGCCCAGGACAGCGGTGCCGCTGAAATACTCTCAGGGCTTGATTTCTCCACACTaGGCCTGGACGGAGACGATC +
Preference number: 5 (lower is better)
Translates to: RCGTGRPRTAVPLKYSQGLISPH*AWTETI
Trigger: GATCGTCTCCGTCCAGGCCAAGTGTGGAGAAATCAA...GCCCTGAGAGTATTTCAGCGGCACCGCTGTCCTGGGCCGCCCGGTGCCACATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629209.1
CDS TCA 90 bp GCCAGTGTCGGGACAAAAATGGTTAGAGCTGGAGATGGACAGGACTaGGCTGGGGCCAGAGGACGAGGAGGGCAGAGCAGGATGGAAGGC +
Preference number: 5 (lower is better)
Translates to: ASVGTKMVRAGDGQD*AGARGRGGQSRMEG
Trigger: GCCTTCCATCCTGCTCTGCCCTCCTCGTCCTCTGGCCCCAGCTCAGTCCTGTCCATCTCCAGCTCTAACCATTTTTGTCCCGACACTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS GCA 90 bp CGTCATCTATGGGAGGGGAACAAGCGCTTCACAGTGGAGAGGCCCTaGCCACCATACCAGCAGGTGCCCAGTTGGGTGAGACTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: RHLWEGNKRFTVERP*PPYQQVPSWVRLSC
Trigger: GCAGCTTAGTCTCACCCAACTGGGCACCTGCTGGTATGGTGGGCAGGGCCTCTCCACTGTGAAGCGCTTGTTCCCCTCCCATAGATGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS CCA 90 bp GAGCTACCGTGGCTGTACTTGAAAGACTCAGGACCCTCAGAGAACTaGGAGCCCCCACCATGTACACCAGAAACACCAGCCCCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: ELPWLYLKDSGPSEN*EPPPCTPETPAPAG
Trigger: CCCCGCTGGGGCTGGTGTTTCTGGTGTACATGGTGGGGGCTCCCAGTTCTCTGAGGGTCCTGAGTCTTTCAAGTACAGCCACGGTAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS-3UTR CAA 90 bp CTTTCAGCAGCCGTCGCTCCAGGTATCTCTGGCGTCGGGGTGCAGAGTCTGTGGTGGCACTGCAGACACTaGCTTAGGCCATTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LSAAVAPGISGVGVQSLWWHCRH*LRPLRW
Trigger: CCACCTCAATGGCCTAAGCAAGTGTCTGCAGTGCCA...CCACAGACTCTGCACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS TCA 90 bp GTGAAGACAGGTCCCAGGGAGGCTGGGCTGGTGGCAGCTCCAGGATaGGACCTCAGAGGTCTGTCTGACTTTTCCAAGCTCGGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: VKTGPREAGLVAAPG*DLRGLSDFSKLGWS
Trigger: AGACCAACCGAGCTTGGAAAAGTCAGACAGACCTCTGAGGTCTCATCCTGGAGCTGCCACCAGCCCAGCCTCCCTGGGACCTGTCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409119.5
ENST00000463471.6
ENST00000463835.5
ENST00000625695.2
ENST00000627817.2
ENST00000630160.2
CDS-3UTR CAA 90 bp CCCATAGCCGGGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTTGATTTCTCCACACTaGGCCTGGACGGAGACGATC +
Preference number: 5 (lower is better)
Translates to: PIAGLGQVRQTSEVSSRSLISPH*AWTETI
Trigger: GATCGTCTCCGTCCAGGCCAAGTGTGGAGAAATCAA...GCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCCCGGCTATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS-3UTR CAA 90 bp AGATGTGGCACCGGGCGGCCCAGGACAGCGGTGCCGCTGAAATACTCTCAGGGCTCATCGTCAACATCATaGATTTCTCCACACTTGGCC +
Preference number: 5 (lower is better)
Translates to: RCGTGRPRTAVPLKYSQGSSSTS*ISPHLA
Trigger: GGCCAAGTGTGGAGAAATCAATGATGTTGACGATGA...GCCCTGAGAGTATTTCAGCGGCACCGCTGTCCTGGGCCGCCCGGTGCCACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629209.1
CDS TCA 90 bp TGGGCCAGAAGAGAAAGAGAAAGAGAAAGAGAATCCGCCTCGGTGTaGCAAGCTGTGCCTCAGAACCCGAGCAGCAGGAGAGTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: WARRERERERESASV*QAVPQNPSSRRVGS
Trigger: GCTGCCCACTCTCCTGCTGCTCGGGTTCTGAGGCACAGCTTGTCACACCGAGGCGGATTCTCTTTCTCTTTCTCTTTCTCTTCTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355716.5
ENST00000442392.6
ENST00000482074.6
ENST00000621877.3
ENST00000625516.2
ENST00000626042.2
CDS-3UTR CAA 90 bp GGCTTGGACAAGTCAGACAGACCTCTGAGGTCTCATCCCGGAGCTGCCACTAACACGGAGACGATCACCTaGACTACATCACCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: GLDKSDRPLRSHPGAATNTETIT*TTSPLG
Trigger: GCCAAGGGGTGATGTAGTCAAGGTGATCGTCTCCGT...GTTAGTGGCAGCTCCGGGATGAGACCTCAGAGGTCTGTCTGACTTGTCCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482602.5
ENST00000629209.1
CDS TCA 90 bp CAGTTTGAGGGGGTGGGTTCTTTCCTGAGCTACCGTGGCTGTACTTaGAAGACTCAGGACCCTCAGAGAACTGGGAGCCCCCACCATGTA +
Preference number: 5 (lower is better)
Translates to: QFEGVGSFLSYRGCT*KTQDPQRTGSPHHV
Trigger: TACATGGTGGGGGCTCCCAGTTCTCTGAGGGTCCTGAGTCTTTCAAGTACAGCCACGGTAGCTCAGGAAAGAACCCACCCCCTCAAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS-3UTR CAA 90 bp ATTAAACAACTGTTTTCAAAGATGTGGCACCGGGCGGCCCAGGACAGCGGTGCCACGGAGACGATCACCTaGACTACATCACCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: IKQLFSKMWHRAAQDSGATETIT*TTSPLG
Trigger: GCCAAGGGGTGATGTAGTCAAGGTGATCGTCTCCGT...GGCACCGCTGTCCTGGGCCGCCCGGTGCCACATCTTTGAAAACAGTTGTTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629209.1
CDS CCA 90 bp ACCTCAGAGGTCTGTCTGACTTTTCCAAGCTCGGCTATGGGGAGGTaGAGAGAAGGAAGGAGGAGAAGAGAAACAAGGAGAGACTGGGCA +
Preference number: 5 (lower is better)
Translates to: TSEVCLTFPSSAMGR*REGRRRRETRRDWA
Trigger: TGCCCAGTCTCTCCTTGTTTCTCTTCTCCTCCTTCCTTCTCTCCACCTCCCCATAGCCGAGCTTGGAAAAGTCAGACAGACCTCTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS GCA 90 bp TCTGCTGAACAGGGTAAACTTCCCTTCCGAATAAAACCACCAGAATaGGGTCTGGCCAATTTCAGTCATAGACCCACCAGGCCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: SAEQGKLPFRIKPPE*GLANFSHRPTRPVS
Trigger: GGACACAGGCCTGGTGGGTCTATGACTGAAATTGGCCAGACCGCATTCTGGTGGTTTTATTCGGAAGGGAAGTTTACCCTGTTCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435221.6
ENST00000629542.2
CDS TCA 90 bp CGGGTTCATTTTACTGCTTTCAGTTTGAGGGGGTGGGTTCTTTCCTaGGCTACCGTGGCTGTACTTGAAAGACTCAGGACCCTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: RVHFTAFSLRGWVLS*ATVAVLERLRTLRE
Trigger: TTCTCTGAGGGTCCTGAGTCTTTCAAGTACAGCCACGGTAGCTCAGGAAAGAACCCACCCCCTCAAACTGAAAGCAGTAAAATGAACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS-3UTR CAA 90 bp CCCCAAATACACTGTTTCATGACAAATAGAAAACAGGAGCCGAATTCAAATCCAGGCTGGGTCACACATTaGGCACTGCAGACACTTGCT +
Preference number: 5 (lower is better)
Translates to: PQIHCFMTNRKQEPNSNPGWVTH*ALQTLA
Trigger: AGCAAGTGTCTGCAGTGCCAAATGTGTGACCCAGCC...TGGATTTGAATTCGGCTCCTGTTTTCTATTTGTCATGAAACAGTGTATTTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355716.5
ENST00000621877.3
CDS GCA 72 bp CTCCCCCTGCAGAGACGCTGCGCGGACTGGGAAGGCTaGCAGCCTCGCCCGGTCTCCCTGTGGACCCTGCCC +
Preference number: 6 (lower is better)
Translates to: LPLQRRCADWEG*QPRPVSLWTLP
Trigger: GGGCAGGGTCCACAGGGAGACCGGGCGAGGCTGGCAGCCTTCCCAGTCCGCGCAGCGTCTCTGCAGGGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435221.6
ENST00000629542.2
CDS GCA 72 bp CAGGGCAGGGTCCCGCAGGCAGGTCCTCGCCCCACGTaGCCACCCAGACACCCACCCCGCAAACGGGTTTCC +
Preference number: 6 (lower is better)
Translates to: QGRVPQAGPRPT*PPRHPPRKRVS
Trigger: GGAAACCCGTTTGCGGGGTGGGTGTCTGGGTGGGCACGTGGGGCGAGGACCTGCCTGCGGGACCCTGCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS CCA 72 bp TCTCGGTGCCTCCCTTCTGCACCCTCTGGCCCGGGCTaGAGGTGGCGTAAGCGCGGCACGCGGCGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: SRCLPSAPSGPG*RWRKRGTRRSG
Trigger: ACCACTGCGCCGCGTGCCGCGCTTACGCCACCTCCAGCCCGGGCCAGAGGGTGCAGAAGGGAGGCACCGAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000451778.5
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000496064.5
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000625695.2
ENST00000626465.2
ENST00000627750.1
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS GCA 72 bp GTGGAAGGGCAGCTCTTGCTCCCCCTGCAGAGACGCTaGGCGGACTGGGAAGGCTGCCAGCCTCGCCCGGTC +
Preference number: 6 (lower is better)
Translates to: VEGQLLLPLQRR*ADWEGCQPRPV
Trigger: GACCGGGCGAGGCTGGCAGCCTTCCCAGTCCGCGCAGCGTCTCTGCAGGGGGAGCAAGAGCTGCCCTTCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435221.6
ENST00000629542.2
CDS CCA 72 bp GGCCTGGGCTGCAGCCACACACGGCGTTCTCTGTCCTaGAGCAGTTCCGGCTCGCGCGCAGGCCCATGGCTG +
Preference number: 6 (lower is better)
Translates to: GLGCSHTRRSLS*SSSGSRAGPWL
Trigger: CAGCCATGGGCCTGCGCGCGAGCCGGAACTGCTCCAGGACAGAGAACGCCGTGTGTGGCTGCAGCCCAGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000451778.5
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000496064.5
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000625695.2
ENST00000626465.2
ENST00000627750.1
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS CCA 72 bp GTGCCGTCAGCCCTGTCCCGCAGGTGCAGTCCTGCCTaGCCGCAGGGAGCACTGGCCATGCTGAGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: VPSALSRRCSPA*PQGALAMLSLA
Trigger: TGCCAGGCTCAGCATGGCCAGTGCTCCCTGCGGCCAGGCAGGACTGCACCTGCGGGACAGGGCTGACGGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000442392.6
ENST00000463471.6
ENST00000466750.5
ENST00000625292.2
ENST00000626042.2
ENST00000630160.2
CDS CCA 72 bp CAGCTCTTGCTCCCCCTGCAGAGACGCTGCGCGGACTaGGAAGGCTGCCAGCCTCGCCCGGTCTCCCTGTGG +
Preference number: 6 (lower is better)
Translates to: QLLLPLQRRCAD*EGCQPRPVSLW
Trigger: CCACAGGGAGACCGGGCGAGGCTGGCAGCCTTCCCAGTCCGCGCAGCGTCTCTGCAGGGGGAGCAAGAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435221.6
ENST00000629542.2
CDS GCA 72 bp CCTGAGGCCGGGAGGGACACCAAGGGACGGCAGAGCTaGGTGTGGGACGAGGGCTTGCAGGAAGGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: PEAGRDTKGRQS*VWDEGLQEGPG
Trigger: CCCAGGACCTTCCTGCAAGCCCTCGTCCCACACGCAGCTCTGCCGTCCCTTGGTGTCCCTCCCGGCCTCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000627750.1
ENST00000630160.2
CDS CCA 72 bp GGACTGCTGCCAGGGCGCCCTGCCAGGCTGAACCCCTaGCTCAGCCAAACGAGGTGCCCAGAGGTACCCAGC +
Preference number: 6 (lower is better)
Translates to: GLLPGRPARLNP*LSQTRCPEVPS
Trigger: GCTGGGTACCTCTGGGCACCTCGTTTGGCTGAGCCAGGGGTTCAGCCTGGCAGGGCGCCCTGGCAGCAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000627750.1
ENST00000630160.2
CDS TCA 72 bp TGGCCGCAGGGAGCACTGGCCATGCTGAGCCTGGCATaGGGCTCCAAGGGGACAGAGCCGTTGGCCGCATGG +
Preference number: 6 (lower is better)
Translates to: WPQGALAMLSLA*GSKGTEPLAAW
Trigger: CCATGCGGCCAACGGCTCTGTCCCCTTGGAGCCTCATGCCAGGCTCAGCATGGCCAGTGCTCCCTGCGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000442392.6
ENST00000463471.6
ENST00000466750.5
ENST00000625292.2
ENST00000626042.2
ENST00000630160.2
CDS GCA 72 bp TCCTCCACGGCCACCGTGGTGACGTCCGGAGGGGCCTaGAGGGCCTCAATGACTGTGGCCTCACCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SSTATVVTSGGA*RASMTVASPSA
Trigger: GGCAGAAGGTGAGGCCACAGTCATTGAGGCCCTGCAGGCCCCTCCGGACGTCACCACGGTGGCCGTGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000355716.5
ENST00000463471.6
ENST00000463835.5
ENST00000466750.5
ENST00000475523.5
ENST00000480305.1
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000627817.2
ENST00000629696.1
ENST00000630160.2
CDS CCA 72 bp GCGGCGCAGTGGTCCCCGTCCTGGACGATGCAGAAGTaGCCTGGGCTGCAGCCACACACGGCGTTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: AAQWSPSWTMQK*PGLQPHTAFSV
Trigger: GACAGAGAACGCCGTGTGTGGCTGCAGCCCAGGCCACTTCTGCATCGTCCAGGACGGGGACCACTGCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000451778.5
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000496064.5
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000625695.2
ENST00000626465.2
ENST00000627750.1
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS TCA 72 bp GGCTTCAGCCCTGCAGCTCTCCTGGACGCAGGCATGTaGCCAGGGTGCCGCTCAGGGTGGGACCTTCAAGCC +
Preference number: 6 (lower is better)
Translates to: GFSPAALLDAGM*PGCRSGWDLQA
Trigger: GGCTTGAAGGTCCCACCCTGAGCGGCACCCTGGTCACATGCCTGCGTCCAGGAGAGCTGCAGGGCTGAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS GCA 72 bp GGACAAGAAGCCCTGTGGGGAAGCAGCAGGCCCGAGTaGCGGCCGGAGAGTCCCAGCACCATCCCATTCCAC +
Preference number: 6 (lower is better)
Translates to: GQEALWGSSRPE*RPESPSTIPFH
Trigger: GTGGAATGGGATGGTGCTGGGACTCTCCGGCCGGCACTCGGGCCTGCTGCTTCCCCACAGGGCTTCTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000625292.2
ENST00000630160.2
CDS GCA 72 bp CCTGCCAGGCTGAACCCCTGGCTCAGCCAAACGAGGTaGCCAGAGGTACCCAGCATGGAGGACCTGAGGCCG +
Preference number: 6 (lower is better)
Translates to: PARLNPWLSQTR*PEVPSMEDLRP
Trigger: CGGCCTCAGGTCCTCCATGCTGGGTACCTCTGGGCACCTCGTTTGGCTGAGCCAGGGGTTCAGCCTGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000627750.1
ENST00000630160.2
CDS CAA 90 bp GATGGGAGAAACCAGCCTTCTGCCCAGATGGGCAGGACGCCGAGCTaGCACTGTCAGTTCCAGGGCAGGGTCCCGCAGGCAGGTCCTCGC +
Preference number: 6 (lower is better)
Translates to: DGRNQPSAQMGRTPS*HCQFQGRVPQAGPR
Trigger: GCGAGGACCTGCCTGCGGGACCCTGCCCTGGAACTGACAGTGCAAGCTCGGCGTCCTGCCCATCTGGGCAGAAGGCTGGTTTCTCCCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS TCA 72 bp AAACGAGGTGCCCAGAGGTACCCAGCATGGAGGACCTaGGGCCGGGAGGGACACCAAGGGACGGCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: KRGAQRYPAWRT*GREGHQGTAEL
Trigger: CAGCTCTGCCGTCCCTTGGTGTCCCTCCCGGCCTCAGGTCCTCCATGCTGGGTACCTCTGGGCACCTCGTTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000627750.1
ENST00000630160.2
CDS CCA 72 bp ACCTGGACTGCACTTGGGGCAGCACTCGGAGCCCACTaGGTACTCGTCCTCCTTGCAGGACGGCAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: TWTALGAALGAH*VLVLLAGRQSW
Trigger: CCAGCTCTGCCGTCCTGCAAGGAGGACGAGTACCCAGTGGGCTCCGAGTGCTGCCCCAAGTGCAGTCCAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000442392.6
ENST00000451778.5
ENST00000463471.6
ENST00000482074.6
ENST00000496064.5
ENST00000621877.3
ENST00000625516.2
ENST00000625695.2
ENST00000626042.2
ENST00000626465.2
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS CCA 72 bp GCAGTGGTCCCCGTCCTGGACGATGCAGAAGTGGCCTaGGCTGCAGCCACACACGGCGTTCTCTGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: AVVPVLDDAEVA*AAATHGVLCPG
Trigger: TCCAGGACAGAGAACGCCGTGTGTGGCTGCAGCCCAGGCCACTTCTGCATCGTCCAGGACGGGGACCACTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000451778.5
ENST00000463471.6
ENST00000466750.5
ENST00000471768.1
ENST00000475523.5
ENST00000496064.5
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000625695.2
ENST00000626465.2
ENST00000627750.1
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS CCA 72 bp CCAGCACCATCCCATTCCACTTTGCAGCTAGGGACGTaGGCACAGGAGAGGTCTGGGCACCCACCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: PAPSHSTLQLGT*AQERSGHPPRA
Trigger: TGCCCGGGGTGGGTGCCCAGACCTCTCCTGTGCCCACGTCCCTAGCTGCAAAGTGGAATGGGATGGTGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000482074.6
ENST00000625292.2
ENST00000625516.2
ENST00000630160.2
CDS CAA 90 bp GGGAGGGACACCAAGGGACGGCAGAGCTGCGTGTGGGACGAGGGCTaGCAGGAAGGTCCTGGGAGGGCTTCGTTGATGGGAGAAACCAGC +
Preference number: 6 (lower is better)
Translates to: GRDTKGRQSCVWDEG*QEGPGRASLMGETS
Trigger: GCTGGTTTCTCCCATCAACGAAGCCCTCCCAGGACCTTCCTGCAAGCCCTCGTCCCACACGCAGCTCTGCCGTCCCTTGGTGTCCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS GCA 72 bp GCAATGGTCTCACAGCGGTGGCGGAGGCACAACTCCTaGTTCTCCCTGGGAGACCGTCCCCAAGGGACTGAC +
Preference number: 6 (lower is better)
Translates to: AMVSQRWRRHNS*FSLGDRPQGTD
Trigger: GTCAGTCCCTTGGGGACGGTCTCCCAGGGAGAAGCAGGAGTTGTGCCTCCGCCACCGCTGTGAGACCATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS CAA 72 bp ACCAAGGGACGGCAGAGCTGCGTGTGGGACGAGGGCTaGCAGGAAGGTCCTGGGAGGGCTTCGTTGATGGGA +
Preference number: 6 (lower is better)
Translates to: TKGRQSCVWDEG*QEGPGRASLMG
Trigger: TCCCATCAACGAAGCCCTCCCAGGACCTTCCTGCAAGCCCTCGTCCCACACGCAGCTCTGCCGTCCCTTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS TCA 72 bp GCTCAGACCGGCAGCTCGGGAACCCAGCTAGCAGGATaGACTCCAGCAGAGGAACTCAGCGCCATTGCTGCG +
Preference number: 6 (lower is better)
Translates to: AQTGSSGTQLAG*TPAEELSAIAA
Trigger: CGCAGCAATGGCGCTGAGTTCCTCTGCTGGAGTTCATCCTGCTAGCTGGGTTCCCGAGCTGCCGGTCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000442392.6
ENST00000451778.5
ENST00000463471.6
ENST00000482074.6
ENST00000496064.5
ENST00000621877.3
ENST00000625516.2
ENST00000625695.2
ENST00000626042.2
ENST00000626465.2
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS TCA 72 bp ATGAGGACAAAGCCTTGTCCCCAGCAGGGCGGCTGTTaGCCCTCAGCCCAGAGCTTCTCCCAGCTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: MRTKPCPQQGGC*PSAQSFSQLSR
Trigger: CCTGCTCAGCTGGGAGAAGCTCTGGGCTGAGGGTCAACAGCCGCCCTGCTGGGGACAAGGCTTTGTCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS TCA 72 bp GTCTGTGGGTCAGTGGTTTGGGCTCCTCCCCGTGAATaGGGGTATTGTCTCCTCCACGGCCACCGTGGTGAC +
Preference number: 6 (lower is better)
Translates to: VCGSVVWAPPRE*GYCLLHGHRGD
Trigger: GTCACCACGGTGGCCGTGGAGGAGACAATACCCTCATTCACGGGGAGGAGCCCAAACCACTGACCCACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000355716.5
ENST00000463471.6
ENST00000463835.5
ENST00000466750.5
ENST00000475523.5
ENST00000480305.1
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000627817.2
ENST00000629696.1
ENST00000630160.2
CDS TCA 72 bp CAGAGTCTGTGGGTCAGTGGTTTGGGCTCCTCCCCGTaGATGAGGGTATTGTCTCCTCCACGGCCACCGTGG +
Preference number: 6 (lower is better)
Translates to: QSLWVSGLGSSP*MRVLSPPRPPW
Trigger: CCACGGTGGCCGTGGAGGAGACAATACCCTCATTCACGGGGAGGAGCCCAAACCACTGACCCACAGACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000355716.5
ENST00000463471.6
ENST00000463835.5
ENST00000466750.5
ENST00000475523.5
ENST00000480305.1
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000627817.2
ENST00000629696.1
ENST00000630160.2
CDS TCA 72 bp TGTCTGCCTGGACTCAGGTGGGCACCAGCCTCCAGGTaGCCTCTTCCCCTGAGGTCACAGGGGGAACCAATA +
Preference number: 6 (lower is better)
Translates to: CLPGLRWAPASR*PLPLRSQGEPI
Trigger: TATTGGTTCCCCCTGTGACCTCAGGGGAAGAGGTCACCTGGAGGCTGGTGCCCACCTGAGTCCAGGCAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000442392.6
ENST00000463471.6
ENST00000466750.5
ENST00000625292.2
ENST00000626042.2
ENST00000630160.2
CDS TCA 72 bp AGAGCCGTTGGCCGCATGGACAGGCTCTGCGCTCAGTaGCTCAAAGGCCACCTCTGGGTCTGGTTCCCCTTT +
Preference number: 6 (lower is better)
Translates to: RAVGRMDRLCAQ*LKGHLWVWFPF
Trigger: AAAGGGGAACCAGACCCAGAGGTGGCCTTTGAGTCACTGAGCGCAGAGCCTGTCCATGCGGCCAACGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000442392.6
ENST00000463471.6
ENST00000466750.5
ENST00000625292.2
ENST00000626042.2
ENST00000630160.2
CDS TCA 72 bp ACGAGGGCTTGCAGGAAGGTCCTGGGAGGGCTTCGTTaGTGGGAGAAACCAGCCTTCTGCCCAGATGGGCAG +
Preference number: 6 (lower is better)
Translates to: TRACRKVLGGLR*WEKPAFCPDGQ
Trigger: CTGCCCATCTGGGCAGAAGGCTGGTTTCTCCCATCAACGAAGCCCTCCCAGGACCTTCCTGCAAGCCCTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS GCA 72 bp CAGGGTGCCGCTCAGGGTGGGACCTTCAAGCCTTTCTaGTGGAGAAGACGGTCATCTCCCAGGGAAGCAACG +
Preference number: 6 (lower is better)
Translates to: QGAAQGGTFKPF*WRRRSSPREAT
Trigger: CGTTGCTTCCCTGGGAGATGACCGTCTTCTCCAGCAGAAAGGCTTGAAGGTCCCACCCTGAGCGGCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS CCA 72 bp GAGCTGCGTGTGGGACGAGGGCTTGCAGGAAGGTCCTaGGAGGGCTTCGTTGATGGGAGAAACCAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: ELRVGRGLAGRS*EGFVDGRNQPS
Trigger: AGAAGGCTGGTTTCTCCCATCAACGAAGCCCTCCCAGGACCTTCCTGCAAGCCCTCGTCCCACACGCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS CCA 72 bp ACCGTCATCTATGGGAGGGGAACAAGCGCTTCACAGTaGAGAGGCCCTGCCCACCATACCAGCAGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: TVIYGRGTSASQ*RGPAHHTSRCP
Trigger: TGGGCACCTGCTGGTATGGTGGGCAGGGCCTCTCCACTGTGAAGCGCTTGTTCCCCTCCCATAGATGACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS CCA 72 bp GGTGCCGCTCAGGGTGGGACCTTCAAGCCTTTCTGCTaGAGAAGACGGTCATCTCCCAGGGAAGCAACGTGG +
Preference number: 6 (lower is better)
Translates to: GAAQGGTFKPFC*RRRSSPREATW
Trigger: CCACGTTGCTTCCCTGGGAGATGACCGTCTTCTCCAGCAGAAAGGCTTGAAGGTCCCACCCTGAGCGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS TCA 72 bp TGTGGCCTCACCTTCTGCCTCCTGTCTTTTCCGCTGTaGGCACACGAATCGTGGAGACCCTGCCTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: CGLTFCLLSFPL*AHESWRPCLLR
Trigger: CCTGAGCAGGCAGGGTCTCCACGATTCGTGTGCTCACAGCGGAAAAGACAGGAGGCAGAAGGTGAGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS TCA 72 bp TGGGCCTCCCCCGGGTTCACTTACTTGGTCTGGTGCTaGCATTCCTCCAGGGTCCCATTGGGAGAGAAGGTC +
Preference number: 6 (lower is better)
Translates to: WASPGFTYLVWC*HSSRVPLGEKV
Trigger: GACCTTCTCTCCCAATGGGACCCTGGAGGAATGTCAGCACCAGACCAAGTAAGTGAACCCGGGGGAGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS CCA 72 bp ACAGCCTCTTTCAGCAGCCGTCGCTCCAGGTATCTCTaGCGTCGGGGTGCAGAGTCTGTGGGTCAGTGGTTT +
Preference number: 6 (lower is better)
Translates to: TASFSSRRSRYL*RRGAESVGQWF
Trigger: AAACCACTGACCCACAGACTCTGCACCCCGACGCCAGAGATACCTGGAGCGACGGCTGCTGAAAGAGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000355716.5
ENST00000463471.6
ENST00000463835.5
ENST00000466750.5
ENST00000475523.5
ENST00000480305.1
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000627817.2
ENST00000629696.1
ENST00000630160.2
CDS CCA 72 bp GCTTCGTTGATGGGAGAAACCAGCCTTCTGCCCAGATaGGCAGGACGCCGAGCTTGCACTGTCAGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: ASLMGETSLLPR*AGRRACTVSSR
Trigger: CCTGGAACTGACAGTGCAAGCTCGGCGTCCTGCCCATCTGGGCAGAAGGCTGGTTTCTCCCATCAACGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000475523.5
ENST00000617968.3
ENST00000625292.2
ENST00000630160.2
CDS CAA 72 bp AAGGTGAGATACAGCACCAGCCTCAAGACGTCGGTTTaGGGGGTGGATCTCCAGGGAGGAGGCCCCCAGTCT +
Preference number: 6 (lower is better)
Translates to: KVRYSTSLKTSV*GVDLQGGGPQS
Trigger: AGACTGGGGGCCTCCTCCCTGGAGATCCACCCCCAAAACCGACGTCTTGAGGCTGGTGCTGTATCTCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 20 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000442392.6
ENST00000451778.5
ENST00000463471.6
ENST00000482074.6
ENST00000496064.5
ENST00000621877.3
ENST00000625516.2
ENST00000625695.2
ENST00000626042.2
ENST00000626465.2
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS TCA 72 bp GGGGTGGGTTCTTTCCTGAGCTACCGTGGCTGTACTTaGAAGACTCAGGACCCTCAGAGAACTGGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: GVGSFLSYRGCT*KTQDPQRTGSP
Trigger: GGGGCTCCCAGTTCTCTGAGGGTCCTGAGTCTTTCAAGTACAGCCACGGTAGCTCAGGAAAGAACCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS CCA 72 bp TATCTCTGGCGTCGGGGTGCAGAGTCTGTGGGTCAGTaGTTTGGGCTCCTCCCCGTGAATGAGGGTATTGTC +
Preference number: 6 (lower is better)
Translates to: YLWRRGAESVGQ*FGLLPVNEGIV
Trigger: GACAATACCCTCATTCACGGGGAGGAGCCCAAACCACTGACCCACAGACTCTGCACCCCGACGCCAGAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000355716.5
ENST00000463471.6
ENST00000463835.5
ENST00000466750.5
ENST00000475523.5
ENST00000480305.1
ENST00000617968.3
ENST00000621877.3
ENST00000625292.2
ENST00000627817.2
ENST00000629696.1
ENST00000630160.2
CDS CCA 72 bp GCCGGCTGTGCTGGCCTCTTACCTGGGTCACACATTTaGCACTGCAGACACTTGCTTAGGCCATTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: AGCAGLLPGSHI*HCRHLLRPLRW
Trigger: CCACCTCAATGGCCTAAGCAAGTGTCTGCAGTGCCAAATGTGTGACCCAGGTAAGAGGCCAGCACAGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463471.6
ENST00000466750.5
ENST00000482074.6
ENST00000625292.2
ENST00000625516.2
ENST00000630160.2
CDS GCA 72 bp AAAGAGAAAGAGAATCCGCCTCGGTGTGACAAGCTGTaGCTCAGAACCCGAGCAGCAGGAGAGTGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: KEKENPPRCDKL*LRTRAAGEWAA
Trigger: TGCTGCCCACTCTCCTGCTGCTCGGGTTCTGAGGCACAGCTTGTCACACCGAGGCGGATTCTCTTTCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355716.5
ENST00000442392.6
ENST00000482074.6
ENST00000621877.3
ENST00000625516.2
ENST00000626042.2
CDS CCA 72 bp GCCCAGGGTCAGCATTTGAAGGTGTCCTCCCGAAGGTaGACAAAGAGCAGAGTGTTCACTTTCCCCAACCCC +
Preference number: 6 (lower is better)
Translates to: AQGQHLKVSSRR*TKSRVFTFPNP
Trigger: GGGGTTGGGGAAAGTGAACACTCTGCTCTTTGTCCACCTTCGGGAGGACACCTTCAAATGCTGACCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS TCA 72 bp CACACATTTGGCACTGCAGACACTTGCTTAGGCCATTaGGGTGGGCAATGTAGGTGCCTGGAGGGCAGGGTT +
Preference number: 6 (lower is better)
Translates to: HTFGTADTCLGH*GGQCRCLEGRV
Trigger: AACCCTGCCCTCCAGGCACCTACATTGCCCACCTCAATGGCCTAAGCAAGTGTCTGCAGTGCCAAATGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000355716.5
ENST00000409119.5
ENST00000426449.5
ENST00000434817.5
ENST00000435221.6
ENST00000442392.6
ENST00000451778.5
ENST00000463471.6
ENST00000466750.5
ENST00000482074.6
ENST00000496064.5
ENST00000621877.3
ENST00000625292.2
ENST00000625516.2
ENST00000625695.2
ENST00000626042.2
ENST00000626465.2
ENST00000628337.2
ENST00000629075.2
ENST00000629542.2
ENST00000630160.2
ENST00000631202.2
CDS CCA 72 bp TGGCTGTACTTGAAAGACTCAGGACCCTCAGAGAACTaGGAGCCCCCACCATGTACACCAGAAACACCAGCC +
Preference number: 6 (lower is better)
Translates to: WLYLKDSGPSEN*EPPPCTPETPA
Trigger: GGCTGGTGTTTCTGGTGTACATGGTGGGGGCTCCCAGTTCTCTGAGGGTCCTGAGTCTTTCAAGTACAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS CAA 72 bp GAAGTCTCAGGTCAGTTAGGGGCCCAGGGTCAGCATTaGAAGGTGTCCTCCCGAAGGTGGACAAAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: EVSGQLGAQGQH*KVSSRRWTKSR
Trigger: TCTGCTCTTTGTCCACCTTCGGGAGGACACCTTCAAATGCTGACCCTGGGCCCCTAACTGACCTGAGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS GCA 72 bp TACCTGGACGGAGACGATCACCTTGACTACATCACCTaGAATACACAGACACACAGGTCAGGGAGGGGCAGT +
Preference number: 6 (lower is better)
Translates to: YLDGDDHLDYIT*NTQTHRSGRGS
Trigger: ACTGCCCCTCCCTGACCTGTGTGTCTGTGTATTGCAGGTGATGTAGTCAAGGTGATCGTCTCCGTCCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS CAA 90 bp AGAAGCTCTGAAGTCTCAGGTCAGTTAGGGGCCCAGGGTCAGCATTaGAAGGTGTCCTCCCGAAGGTGGACAAAGAGCAGAGTGTTCACT +
Preference number: 6 (lower is better)
Translates to: RSSEVSGQLGAQGQH*KVSSRRWTKSRVFT
Trigger: AGTGAACACTCTGCTCTTTGTCCACCTTCGGGAGGACACCTTCAAATGCTGACCCTGGGCCCCTAACTGACCTGAGACTTCAGAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496064.5
ENST00000626465.2
CDS TCA 72 bp AGAGAAAGAGAAAGAGAAAGAGAATCCGCCTCGGTGTaGCAAGCTGTGCCTCAGAACCCGAGCAGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: RERERERESASV*QAVPQNPSSRR
Trigger: TCTCCTGCTGCTCGGGTTCTGAGGCACAGCTTGTCACACCGAGGCGGATTCTCTTTCTCTTTCTCTTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355716.5
ENST00000442392.6
ENST00000482074.6
ENST00000621877.3
ENST00000625516.2
ENST00000626042.2
CDS TCA 72 bp TTTACTGCTTTCAGTTTGAGGGGGTGGGTTCTTTCCTaGGCTACCGTGGCTGTACTTGAAAGACTCAGGACC +
Preference number: 6 (lower is better)
Translates to: FTAFSLRGWVLS*ATVAVLERLRT
Trigger: GGTCCTGAGTCTTTCAAGTACAGCCACGGTAGCTCAGGAAAGAACCCACCCCCTCAAACTGAAAGCAGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463471.6
ENST00000630160.2
CDS GCA 72 bp CAGGGTAAACTTCCCTTCCGAATAAAACCACCAGAATaGGGTCTGGCCAATTTCAGTCATAGACCCACCAGG +
Preference number: 6 (lower is better)
Translates to: QGKLPFRIKPPE*GLANFSHRPTR
Trigger: CCTGGTGGGTCTATGACTGAAATTGGCCAGACCGCATTCTGGTGGTTTTATTCGGAAGGGAAGTTTACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435221.6
ENST00000629542.2