RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFRSF13C (Homo sapiens)

Ensembl gene IDs: ENSG00000159958

Ensembl transcript IDs: ENST00000291232.5

Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAAGCTGCCCAGGGCGAAGTCCAGGTCAGGAGGTTCTGACCCTGTaGAGGAGGGCAGGTAGGAGGCGGCTGACTGAGTGCACAGTGTCG +
Preference number: 1 (lower is better)
Translates to: GSCPGRSPGQEVLTL*RRAGRRRLTECTVS
Trigger: CGACACTGTGCACTCAGTCAGCCGCCTCCTACCTGCCCTCCTGCACAGGGTCAGAACCTCCTGACCTGGACTTCGCCCTGGGCAGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 90 bp GACCCTGAGAGAGCTACCTGCCAGCATGTTCCTTCAGCTCGAGTTTaGAGTCCAGCCCTGGAGGCTGCGCACCTCCTCCCAAATGCAGGC +
Preference number: 1 (lower is better)
Translates to: DPERATCQHVPSARV*SPALEAAHLLPNAG
Trigger: GCCTGCATTTGGGAGGAGGTGCGCAGCCTCCAGGGCTGGACTCCAAACTCGAGCTGAAGGAACATGCTGGCAGGTAGCTCTCTCAGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR GCA 90 bp TCGAGTTTGGAGTCCAGCCCTGGAGGCTGCGCACCTCCTCCCAAATaGAGGCTTGTGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCA +
Preference number: 1 (lower is better)
Translates to: SSLESSPGGCAPPPK*RLVALEAATGVKMA
Trigger: TGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCACAAGCCTGCATTTGGGAGGAGGTGCGCAGCCTCCAGGGCTGGACTCCAAACTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR GCA 90 bp GTCTTGGAGCAGCTGGAACCCCAGGTGGACCCTGAGAGAGCTACCTaGCAGCATGTTCCTTCAGCTCGAGTTTGGAGTCCAGCCCTGGAG +
Preference number: 1 (lower is better)
Translates to: VLEQLEPQVDPERAT*QHVPSARVWSPALE
Trigger: CTCCAGGGCTGGACTCCAAACTCGAGCTGAAGGAACATGCTGGCAGGTAGCTCTCTCAGGGTCCACCTGGGGTTCCAGCTGCTCCAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR GCA 90 bp GGAGTTCAAGGGACCTCATGTCCACCTGGTTCAAGGTCACACGCCTaGCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCCCT +
Preference number: 1 (lower is better)
Translates to: GVQGTSCPPGSRSHA*PGLYTKEPPVGPSP
Trigger: AGGGCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCTTGAACCAGGTGGACATGAGGTCCCTTGAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 90 bp GCCCTGGAGGCTGCGCACCTCCTCCCAAATGCAGGCTTGTGGCTCTaGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAG +
Preference number: 1 (lower is better)
Translates to: ALEAAHLLPNAGLWL*KLPLGSKWHLRFWQ
Trigger: CTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCACAAGCCTGCATTTGGGAGGAGGTGCGCAGCCTCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 90 bp CTACCTGCCAGCATGTTCCTTCAGCTCGAGTTTGGAGTCCAGCCCTaGAGGCTGCGCACCTCCTCCCAAATGCAGGCTTGTGGCTCTGGA +
Preference number: 1 (lower is better)
Translates to: LPASMFLQLEFGVQP*RLRTSSQMQACGSG
Trigger: TCCAGAGCCACAAGCCTGCATTTGGGAGGAGGTGCGCAGCCTCCAGGGCTGGACTCCAAACTCGAGCTGAAGGAACATGCTGGCAGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 90 bp AGTCCAGCCCTGGAGGCTGCGCACCTCCTCCCAAATGCAGGCTTGTaGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTC +
Preference number: 1 (lower is better)
Translates to: SPALEAAHLLPNAGL*LWKLPLGSKWHLRF
Trigger: GAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCACAAGCCTGCATTTGGGAGGAGGTGCGCAGCCTCCAGGGCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 90 bp TCAAGGGACCTCATGTCCACCTGGTTCAAGGTCACACGCCTGCCCTaGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCCCTTCCAT +
Preference number: 1 (lower is better)
Translates to: SRDLMSTWFKVTRLP*PLHKGASCRSQPFH
Trigger: ATGGAAGGGCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCTTGAACCAGGTGGACATGAGGTCCCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR GCA 90 bp AGGCTGCGCACCTCCTCCCAAATGCAGGCTTGTGGCTCTGGAAGCTaGCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTGGGC +
Preference number: 1 (lower is better)
Translates to: RLRTSSQMQACGSGS*HWGQNGILGSGRLG
Trigger: GCCCAATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCACAAGCCTGCATTTGGGAGGAGGTGCGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR GCA 90 bp TGCTCCCTTCCAAAGATGCTAAGCTGCAACAAGTTCCAAGGAAGCTaGCCAGGGCGAAGTCCAGGTCAGGAGGTTCTGACCCTGTGCAGG +
Preference number: 1 (lower is better)
Translates to: CSLPKMLSCNKFQGS*PGRSPGQEVLTLCR
Trigger: CCTGCACAGGGTCAGAACCTCCTGACCTGGACTTCGCCCTGGGCAGCTTCCTTGGAACTTGTTGCAGCTTAGCATCTTTGGAAGGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR TCA 90 bp GCAGAGTTAGCCTGGTCCCAGAAAGAGGGCATGTGCATGCTGGAGTaGAGAGCTGAATTTGATTTCCAAGCCCCTGGCTGGGGGTCCAGA +
Preference number: 1 (lower is better)
Translates to: AELAWSQKEGMCMLE*RAEFDFQAPGWGSR
Trigger: TCTGGACCCCCAGCCAGGGGCTTGGAAATCAAATTCAGCTCTTCACTCCAGCATGCACATGCCCTCTTTCTGGGACCAGGCTAACTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR TCA 90 bp GGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTaGAGCCAAAGGCAAGCACACCAAACTCCATGGGGGCTGAATGCT +
Preference number: 1 (lower is better)
Translates to: GAGLPPSRAVKDGEV*SQRQAHQTPWGLNA
Trigger: AGCATTCAGCCCCCATGGAGTTTGGTGTGCTTGCCTTTGGCTTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR TCA 90 bp AGGAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTaGGGTCTGAAGCCAAAGGCAAGCACACCAAACTCCATGGGGGCT +
Preference number: 1 (lower is better)
Translates to: RNRSWATTFKGCQRW*GLKPKASTPNSMGA
Trigger: AGCCCCCATGGAGTTTGGTGTGCTTGCCTTTGGCTTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR TCA 90 bp CTAAATGTGCTGTGTCTTGGAGCAGCTGGAACCCCAGGTGGACCCTaGGAGAGCTACCTGCCAGCATGTTCCTTCAGCTCGAGTTTGGAG +
Preference number: 1 (lower is better)
Translates to: LNVLCLGAAGTPGGP*ESYLPACSFSSSLE
Trigger: CTCCAAACTCGAGCTGAAGGAACATGCTGGCAGGTAGCTCTCTCAGGGTCCACCTGGGGTTCCAGCTGCTCCAAGACACAGCACATTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR TCA 90 bp CCCAGGGCCCAAGAGTGGGAAAACAGCACCCAGAACTCCACCTTCTaGCTCCTAGTCCAGTGCTCCCTTCCAAAGATGCTAAGCTGCAAC +
Preference number: 1 (lower is better)
Translates to: PRAQEWENSTQNSTF*LLVQCSLPKMLSCN
Trigger: GTTGCAGCTTAGCATCTTTGGAAGGGAGCACTGGACTAGGAGTCAGAAGGTGGAGTTCTGGGTGCTGTTTTCCCACTCTTGGGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR TCA 90 bp CTGAGATGGGTTCATGGAGCAAATAGCCAGGCAGAGACCTGGATGTaGGTGGCCACTGTCTTCCAAGCTGGGCACACAACAGGTCCTTGG +
Preference number: 1 (lower is better)
Translates to: LRWVHGANSQAETWM*VATVFQAGHTTGPW
Trigger: CCAAGGACCTGTTGTGTGCCCAGCTTGGAAGACAGTGGCCACTCACATCCAGGTCTCTGCCTGGCTATTTGCTCCATGAACCCATCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 90 bp CCAAATGCAGGCTTGTGGCTCTGGAAGCTGCCACTGGGGTCAAAATaGCATCTTAGGTTCTGGCAGATTGGGCCAATCTCAGGGTTGACC +
Preference number: 1 (lower is better)
Translates to: PNAGLWLWKLPLGSK*HLRFWQIGPISGLT
Trigger: GGTCAACCCTGAGATTGGCCCAATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCACAAGCCTGCATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 90 bp AGCCCTTCCATGTTTATGGCTAAATGTGCTGTGTCTTGGAGCAGCTaGAACCCCAGGTGGACCCTGAGAGAGCTACCTGCCAGCATGTTC +
Preference number: 1 (lower is better)
Translates to: SPSMFMAKCAVSWSS*NPRWTLRELPASMF
Trigger: GAACATGCTGGCAGGTAGCTCTCTCAGGGTCCACCTGGGGTTCCAGCTGCTCCAAGACACAGCACATTTAGCCATAAACATGGAAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR GCA 90 bp TGTACTAAATCCCAAAGCAAGCGAACCCATGAATTGATTATTCACTaGTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCA +
Preference number: 1 (lower is better)
Translates to: CTKSQSKRTHELIIH*CHLHQFKSRTALRA
Trigger: TGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAATAATCAATTCATGGGTTCGCTTGCTTTGGGATTTAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR CCA 90 bp AGGTCACACGCCTGCCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCTTCCAAGCCCCTGGCTaGGGGTCCAGAGGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: RSHACPGLYTKEPPVGPSFQAPG*GSRGRA
Trigger: TGCCCTCCCTCTGGACCCCCAGCCAGGGGCTTGGAA...GCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR TCA 90 bp AGGTCACACGCCTGCCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCTCGGGGAGGACTGCCTaGGGCCAGGAGTTTGAGACT +
Preference number: 2 (lower is better)
Translates to: RSHACPGLYTKEPPVGPSSGRTA*GQEFET
Trigger: AGTCTCAAACTCCTGGCCTCAGGCAGTCCTCCCCGA...GCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR CCA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGTTTGGAGTCCAGCCCTaGAGGCTGCGCACCTCCTCC +
Preference number: 2 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQFGVQP*RLRTSS
Trigger: GGAGGAGGTGCGCAGCCTCCAGGGCTGGACTCCAAA...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR TCA 90 bp AGGTCACACGCCTGCCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCCCAGGAGGCGGAGCTTaGAGTGAGCCGAAATTGCGT +
Preference number: 2 (lower is better)
Translates to: RSHACPGLYTKEPPVGPSPGGGA*SEPKLR
Trigger: ACGCAATTTCGGCTCACTTCAAGCTCCGCCTCCTGG...GCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR TCA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGCAGGTAGGAGGCGGCTaGCTGAGTGCACAGTGTCGT +
Preference number: 2 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQQVGGG*LSAQCR
Trigger: ACGACACTGTGCACTCAGTCAGCCGCCTCCTACCTG...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CAA 90 bp TGGAGTCCAGCCCTGGAGGCTGCGCACCTCCTCCCAAATGCAGGCTaGTGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGG +
Preference number: 2 (lower is better)
Translates to: WSPALEAAHLLPNAG*WLWKLPLGSKWHLR
Trigger: CCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCACAAGCCTGCATTTGGGAGGAGGTGCGCAGCCTCCAGGGCTGGACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR CCA 90 bp AGGTCACACGCCTGCCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCATTAGCTGGGCAAGGTaGAGCACCTGTAGTCCCACC +
Preference number: 2 (lower is better)
Translates to: RSHACPGLYTKEPPVGPSISWAR*STCSPT
Trigger: GGTGGGACTACAGGTGCTCCACCTTGCCCAGCTAAT...GCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR CCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGAGCAGGCTTGTGGCTCTaGAAGCTGCCACTGGGGTCA +
Preference number: 2 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGAGLWL*KLPLGS
Trigger: TGACCCCAGTGGCAGCTTCCAGAGCCACAAGCCTGC...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR GCA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGGAAGTGAGCCGAAATTaGGTCACTGCACTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQEVSRN*VTALQP
Trigger: AGGCTGGAGTGCAGTGACGCAATTTCGGCTCACTTC...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR CCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGAGCACACCAAACTCCATaGGGGCTGAATGCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGAHQTP*GLNAVV
Trigger: GACCACAGCATTCAGCCCCCATGGAGTTTGGTGTGC...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR TCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGAAAACTCCATGGGGGCTaGATGCTGTGGTCTGTAGTG +
Preference number: 2 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGKLHGG*MLWSVV
Trigger: CACTACAGACCACAGCATTCAGCCCCCATGGAGTTT...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR TCA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGTGGGGTACAGATACCTaGGAATCAGCAAAATCCAGC +
Preference number: 2 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQWGTDT*ESAKSS
Trigger: GCTGGATTTTGCTGATTCTCAGGTATCTGTACCCCA...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR TCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTAGTGCCCCAGCCTTTTaGAGGCACAGGAACAGGAGC +
Preference number: 2 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQISAPAF*RHRNRS
Trigger: GCTCCTGTTCCTGTGCCTTCAAAAGGCTGGGGCACT...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR TCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTCTGAGGCCAGGAGTTTaGGACTGGCCTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGLRPGV*DWPGQH
Trigger: ATGTTGCCCAGGCCAGTCTCAAACTCCTGGCCTCAG...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR TCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGAAAAGCAGGACGGCTCTaGGGGCAGGTATTAAAGAAA +
Preference number: 2 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGKAGRL*GQVLKK
Trigger: TTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTT...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR CCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTAGTTTGAGACTGGCCTaGGCAACATACCGAGACCCT +
Preference number: 2 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQISLRLA*ATYRDP
Trigger: AGGGTCTCGGTATGTTGCCCAGGCCAGTCTCAAACT...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR TCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTAAAGATGGTGAGGTCTaGAGCCAAAGGCAAGCACAC +
Preference number: 2 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQIKDGEV*SQRQAH
Trigger: GTGTGCTTGCCTTTGGCTTCAGACCTCACCATCTTT...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR GCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTCTGAAGCAGAAAGATTaGTTGAGCCCAGGCTGCAAT +
Preference number: 2 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGLKQKD*LSPGCN
Trigger: ATTGCAGCCTGGGCTCAAGCAATCTTTCTGCTTCAG...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR GCA 90 bp TCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTGGGCGAATTGATTATTCACTaGTGCCATTTGCATCAGTTT +
Preference number: 2 (lower is better)
Translates to: SGSCHWGQNGILGSGRLGELIIH*CHLHQF
Trigger: AAACTGATGCAAATGGCAGCAGTGAATAATCAATTC...GCCCAATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR TCA 72 bp CTGTGTCTTGGAGCAGCTGGAACCCCAGGTGGACCCTaGGAGAGCTACCTGCCAGCATGTTCCTTCAGCTCG +
Preference number: 3 (lower is better)
Translates to: LCLGAAGTPGGP*ESYLPACSFSS
Trigger: CGAGCTGAAGGAACATGCTGGCAGGTAGCTCTCTCAGGGTCCACCTGGGGTTCCAGCTGCTCCAAGACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR GCA 72 bp GGGACCTCATGTCCACCTGGTTCAAGGTCACACGCCTaGCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGT +
Preference number: 3 (lower is better)
Translates to: GTSCPPGSRSHA*PGLYTKEPPVG
Trigger: ACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCTTGAACCAGGTGGACATGAGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 72 bp CTCATGTCCACCTGGTTCAAGGTCACACGCCTGCCCTaGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: LMSTWFKVTRLP*PLHKGASCRSQ
Trigger: CTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCTTGAACCAGGTGGACATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR CAA 90 bp AGGTCACACGCCTGCCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCAGGCAGGAGAATCACTaGAACCAAGGAGTCGGAGGT +
Preference number: 3 (lower is better)
Translates to: RSHACPGLYTKEPPVGPSRQENH*NQGVGG
Trigger: ACCTCCGACTCCTTGGTTCAAGTGATTCTCCTGCCT...GCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR CAA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGGCTGAAGCAGAAAGATaGCTTGAGCCCAGGCTGCAA +
Preference number: 3 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQAEAER*LEPRLQ
Trigger: TTGCAGCCTGGGCTCAAGCAATCTTTCTGCTTCAGC...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR GCA 72 bp CAGCTGGAACCCCAGGTGGACCCTGAGAGAGCTACCTaGCAGCATGTTCCTTCAGCTCGAGTTTGGAGTCCA +
Preference number: 3 (lower is better)
Translates to: QLEPQVDPERAT*QHVPSARVWSP
Trigger: TGGACTCCAAACTCGAGCTGAAGGAACATGCTGGCAGGTAGCTCTCTCAGGGTCCACCTGGGGTTCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 72 bp GCTGCGCACCTCCTCCCAAATGCAGGCTTGTGGCTCTaGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGG +
Preference number: 3 (lower is better)
Translates to: AAHLLPNAGLWL*KLPLGSKWHLR
Trigger: CCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCACAAGCCTGCATTTGGGAGGAGGTGCGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 72 bp GAGAGAGAAGGGAGTTCAAGGGACCTCATGTCCACCTaGTTCAAGGTCACACGCCTGCCCTGGCCTCTACAC +
Preference number: 3 (lower is better)
Translates to: EREGSSRDLMST*FKVTRLPWPLH
Trigger: GTGTAGAGGCCAGGGCAGGCGTGTGACCTTGAACCAGGTGGACATGAGGTCCCTTGAACTCCCTTCTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR GCA 72 bp CCAAAGATGCTAAGCTGCAACAAGTTCCAAGGAAGCTaGCCAGGGCGAAGTCCAGGTCAGGAGGTTCTGACC +
Preference number: 3 (lower is better)
Translates to: PKMLSCNKFQGS*PGRSPGQEVLT
Trigger: GGTCAGAACCTCCTGACCTGGACTTCGCCCTGGGCAGCTTCCTTGGAACTTGTTGCAGCTTAGCATCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 72 bp AAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTaGCAGATTGGGCCAATCTCAGGGTTGACCCTGGGG +
Preference number: 3 (lower is better)
Translates to: KLPLGSKWHLRF*QIGPISGLTLG
Trigger: CCCCAGGGTCAACCCTGAGATTGGCCCAATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 72 bp ACTGAGTGCACAGTGTCGTCCAGGAGTGGAAAGAGATaGTCTTGTCCCCAGACCCCAGAGCAAGGAACACCA +
Preference number: 3 (lower is better)
Translates to: TECTVSSRSGKR*SCPQTPEQGTP
Trigger: TGGTGTTCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACACTGTGCACTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR TCA 72 bp CTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTaGAGCCAAAGGCAAGCACACCAAACTCCATGGGGG +
Preference number: 3 (lower is better)
Translates to: LPPSRAVKDGEV*SQRQAHQTPWG
Trigger: CCCCCATGGAGTTTGGTGTGCTTGCCTTTGGCTTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 72 bp ATGTTTATGGCTAAATGTGCTGTGTCTTGGAGCAGCTaGAACCCCAGGTGGACCCTGAGAGAGCTACCTGCC +
Preference number: 3 (lower is better)
Translates to: MFMAKCAVSWSS*NPRWTLRELPA
Trigger: GGCAGGTAGCTCTCTCAGGGTCCACCTGGGGTTCCAGCTGCTCCAAGACACAGCACATTTAGCCATAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR-3UTR CAA 90 bp TTGAAGGCACAGGAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGAGTGAAGAGCTGAATTaGATTTCCAAGCCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: LKAQEQELGYHLQGLSKMSEELN*ISKPLA
Trigger: AGCCAGGGGCTTGGAAATCAAATTCAGCTCTTCACT...CATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTCCTGTGCCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR TCA 72 bp CAAGAGTGGGAAAACAGCACCCAGAACTCCACCTTCTaGCTCCTAGTCCAGTGCTCCCTTCCAAAGATGCTA +
Preference number: 3 (lower is better)
Translates to: QEWENSTQNSTF*LLVQCSLPKML
Trigger: TAGCATCTTTGGAAGGGAGCACTGGACTAGGAGTCAGAAGGTGGAGTTCTGGGTGCTGTTTTCCCACTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR TCA 72 bp TCCTCCAGGTGCTCTTATGAAGATCAAATGAGGTATTaGTGTGACGGCTCTGGGTCTCAGTTTCCTCGTCTG +
Preference number: 3 (lower is better)
Translates to: SSRCSYEDQMRY*CDGSGSQFPRL
Trigger: CAGACGAGGAAACTGAGACCCAGAGCCGTCACATCAATACCTCATTTGATCTTCATAAGAGCACCTGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CCA 72 bp CAATTATGTAGAAAAATACACCACACACTCGAGGCCTaGGGTTACTGGACACGGGTCATTTCTTCCCTGACT +
Preference number: 3 (lower is better)
Translates to: QLCRKIHHTLEA*GYWTRVISSLT
Trigger: AGTCAGGGAAGAAATGACCCGTGTCCAGTAACCCCAGGCCTCGAGTGTGTGGTGTATTTTTCTACATAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR GCA 72 bp TCCCAAAGCAAGCGAACCCATGAATTGATTATTCACTaGTGCCATTTGCATCAGTTTAAAAGCAGGACGGCT +
Preference number: 3 (lower is better)
Translates to: SQSKRTHELIIH*CHLHQFKSRTA
Trigger: AGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAATAATCAATTCATGGGTTCGCTTGCTTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR TCA 72 bp CTTGTACTAAATCCCAAAGCAAGCGAACCCATGAATTaGTTATTCACTGCTGCCATTTGCATCAGTTTAAAA +
Preference number: 3 (lower is better)
Translates to: LVLNPKASEPMN*LFTAAICISLK
Trigger: TTTTAAACTGATGCAAATGGCAGCAGTGAATAATCAATTCATGGGTTCGCTTGCTTTGGGATTTAGTACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp AGGTCACACGCCTGCCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCTCCTGGGCGCAGGGCTaGTGGCCCCGGCCGGTTTCG +
Preference number: 4 (lower is better)
Translates to: RSHACPGLYTKEPPVGPSSWAQG*WPRPVS
Trigger: CGAAACCGGCCGGGGCCAGCAGCCCTGCGCCCAGGA...GCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp AAGCTGCCCAGGGCGAAGTCCAGGTCAGGAGGTTCTGACCCTGTGCAGGAGGGCCAGGGCCGGCCGTCTTaGTGGTCACCAGTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: KLPRAKSRSGGSDPVQEGQGRPS*WSPVQW
Trigger: CCACTGAACTGGTGACCACCAAGACGGCCGGCCCTG...GCCCTCCTGCACAGGGTCAGAACCTCCTGACCTGGACTTCGCCCTGGGCAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp AAGCTGCCCAGGGCGAAGTCCAGGTCAGGAGGTTCTGACCCTGTGCAGGAGGGCCTTCCTGCCCTTCTCTaGGGACCACAGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KLPRAKSRSGGSDPVQEGLPALL*GPQARR
Trigger: CCTCCTGGCCTGTGGTCCCCAGAGAAGGGCAGGAAG...GCCCTCCTGCACAGGGTCAGAACCTCCTGACCTGGACTTCGCCCTGGGCAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGAGCCCTCGCCTCATGGTaGCGACGCCGCCGCACAAGC +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGALASW*RRRRTS
Trigger: GCTTGTGCGGCGGCGTCGGCACCATGAGGCGAGGGC...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp AGGTCACACGCCTGCCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCGCAGGGGCCACCTCCTaGCGGCTCCCTGCTATTGTT +
Preference number: 4 (lower is better)
Translates to: RSHACPGLYTKEPPVGPSAGATS*RLPAIV
Trigger: AACAATAGCAGGGAGCCGGCAGGAGGTGGCCCCTGC...GCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGACCTCACCCTGTCACCTaGCTCCCTGGGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGPHPVT*LPGGRG
Trigger: GCCCCTGCCCCCAGGGAGCCAGGTGACAGGGTGAGG...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGGCTGGCGGGGCCAGCTaGGACAGAGAGATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQAGGAS*DREMPK
Trigger: CTTGGGCATCTCTCTGTCCCAGCTGGCCCCGCCAGC...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp AAGCTGCCCAGGGCGAAGTCCAGGTCAGGAGGTTCTGACCCTGTGCAGGAGGGCCCAGGAGGCGGAGCTTaGAGTGAGCCGAAATTGCGT +
Preference number: 4 (lower is better)
Translates to: KLPRAKSRSGGSDPVQEGPGGGA*SEPKLR
Trigger: ACGCAATTTCGGCTCACTTCAAGCTCCGCCTCCTGG...GCCCTCCTGCACAGGGTCAGAACCTCCTGACCTGGACTTCGCCCTGGGCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGTGGAAGGGGAGTGGATaGCTGGGCCCATGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQWKGSG*LGPCGP
Trigger: AGGCCCACATGGGCCCAGCCATCCACTCCCCTTCCA...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp AGGTCACACGCCTGCCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCGGCCAATCTCAGGGTTaGCCCTGGGGTACAGATACC +
Preference number: 4 (lower is better)
Translates to: RSHACPGLYTKEPPVGPSGQSQG*PWGTDT
Trigger: GGTATCTGTACCCCAGGGTCAACCCTGAGATTGGCC...GCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCCACTGTGACGGTGGGTaGCCAGGGGGCTGGCACAGG +
Preference number: 4 (lower is better)
Translates to: KSRTALRAGIKEIEARPGHCDGG*PGGWHR
Trigger: CCTGTGCCAGCCCCCTGGTCACCCACCGTCACAGTG...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp TTGAAGGCACAGGAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGACCGACTCCTGCGGCTaGAGCGCCGTCCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: LKAQEQELGYHLQGLSKMTDSCG*SAVLGA
Trigger: TGCGCCCAGGACGGCGCTGCAGCCGCAGGAGTCGGT...CATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTCCTGTGCCTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTGCGCCCACCGACTCCTaGGGCTGCAGCGCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQIAPTDS*GCSAVL
Trigger: CAGGACGGCGCTGCAGCCGCAGGAGTCGGTGGGCGC...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp AAGCTGCCCAGGGCGAAGTCCAGGTCAGGAGGTTCTGACCCTGTGCAGGAGGGCGAGATGCCCAAGGTTTaGATGTCTGAGCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KLPRAKSRSGGSDPVQEGEMPKV*MSEPQR
Trigger: CCTCTGGGGCTCAGACATGCAAACCTTGGGCATCTC...GCCCTCCTGCACAGGGTCAGAACCTCCTGACCTGGACTTCGCCCTGGGCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGGCAGGCTTGTGGCTCTaGAAGCTGCCACTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQAGLWL*KLPLGS
Trigger: TGACCCCAGTGGCAGCTTCCAGAGCCACAAGCCTGC...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTTCCGTCGGGGGCCTCTaGGGAGGACGCGCCGCGAAG +
Preference number: 4 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGSVGGL*GGRAAK
Trigger: CTTCGCGGCGCGTCCTCCGCAGAGGCCCCCGACGGA...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGACTCCTGCCGGCTCCCTaGTATTGTTGCTCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGLLPAP*YCCSGP
Trigger: CGGCCCTGAGCAACAATAGCAGGGAGCCGGCAGGAG...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp AAGCTGCCCAGGGCGAAGTCCAGGTCAGGAGGTTCTGACCCTGTGCAGGAGGGCGCTGGGACAGAGAGATaGCCAAGGTTTGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: KLPRAKSRSGGSDPVQEGAGTER*PRFACL
Trigger: CAGACATGCAAACCTTGGGCATCTCTCTGTCCCAGC...GCCCTCCTGCACAGGGTCAGAACCTCCTGACCTGGACTTCGCCCTGGGCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAACCGCAGGCCACGCAGTaGCGGACCAGCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEPQATQ*RTSRSK
Trigger: CTTCGACCTGCTGGTCCGCCACTGCGTGGCCTGCGG...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGAAGGTGGGGTGGTTCCTaGGTCTTCCCCAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGRWGGS*VFPRRR
Trigger: CCTCCTCCTGGGGAAGACCCAGGAACCACCCCACCT...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGCAAGGTTTGCATGTCTaGGCCCCAGAGGGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQQGLHV*APEGFH
Trigger: GTGAAACCCCTCTGGGGCTCAGACATGCAAACCTTG...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp AGGTCACACGCCTGCCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCTCTAAGGTTCCTTCCTaGCCTTCTCTGGGGACCACA +
Preference number: 4 (lower is better)
Translates to: RSHACPGLYTKEPPVGPSSKVPS*PSLGTT
Trigger: TGTGGTCCCCAGAGAAGGGCAGGAAGGAACCTTAGA...GCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCCTTGTCCAGGGGCTCTaGGGCGTCCTTGTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: KSRTALRAGIKEIEARPGLVQGL*GVLVSV
Trigger: GACGGAGACAAGGACGCCCCAGAGCCCCTGGACAAG...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp TCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTGGGCTTCCAAGCCCCTGGCTaGGGGTCCAGAGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SGSCHWGQNGILGSGRLGFQAPG*GSRGRA
Trigger: TGCCCTCCCTCTGGACCCCCAGCCAGGGGCTTGGAA...GCCCAATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCTTTGGAGTCCAGCCCTaGAGGCTGCGCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KSRTALRAGIKEIEARPGFGVQP*RLRTSS
Trigger: GGAGGAGGTGCGCAGCCTCCAGGGCTGGACTCCAAA...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGACACACACTCGAGGCCTaGGGTTACTGGACACGGGTC +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGHTLEA*GYWTRV
Trigger: GACCCGTGTCCAGTAACCCCAGGCCTCGAGTGTGTG...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp AGGCAAGCACACCAAACTCCATGGGGGCTGAATGCTGTGGTCTGTAGTGTCTGTACCCCAGGTGGACCCTaGGAGAGCTACCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RQAHQTPWGLNAVVCSVCTPGGP*ESYLPA
Trigger: TGCTGGCAGGTAGCTCTCTCAGGGTCCACCTGGGGT...ACAGACACTACAGACCACAGCATTCAGCCCCCATGGAGTTTGGTGTGCTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGAGGGGTTTTCACCTGCTaGGCTAACCCTGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGGVFTC*ANPGCS
Trigger: GCTACAGCCAGGGTTAGCTCAGCAGGTGAAAACCCC...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp AGGTCACACGCCTGCCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCGGGTCATTTCTTCCCTaGCTACATCATGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: RSHACPGLYTKEPPVGPSGSFLP*LHHGFR
Trigger: CCGGAATCCATGATGTAGTCAGGGAAGAAATGACCC...GCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCGCTCCCTGCTATTGTTaGTCAGGGCCGGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: KSRTALRAGIKEIEARPGAPCYC*SGPAVL
Trigger: CAAGACGGCCGGCCCTGAGCAACAATAGCAGGGAGC...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp AGGCAAGCACACCAAACTCCATGGGGGCTGAATGCTGTGGTCTGTAGTGTCTGTTCCAGCCCTGGAGGCTaGGCACCTCCTCCCAAATGC +
Preference number: 4 (lower is better)
Translates to: RQAHQTPWGLNAVVCSVCSSPGG*APPPKC
Trigger: GCATTTGGGAGGAGGTGCGCAGCCTCCAGGGCTGGA...ACAGACACTACAGACCACAGCATTCAGCCCCCATGGAGTTTGGTGTGCTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGAAGGCGGCTGACTGAGTaGACAGTGTCGTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGRRLTE*TVSSRS
Trigger: ACTCCTGGACGACACTGTGCACTCAGTCAGCCGCCT...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGAGTTTGAGACTGGCCTaGGCAACATACCGAGACCCT +
Preference number: 4 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQSLRLA*ATYRDP
Trigger: AGGGTCTCGGTATGTTGCCCAGGCCAGTCTCAAACT...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGACCTTCAGCTCGAGTTTaGAGTCCAGCCCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGPSARV*SPALEA
Trigger: AGCCTCCAGGGCTGGACTCCAAACTCGAGCTGAAGG...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCGTCACACGCCTGCCCTaGCCTCTACACAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KSRTALRAGIKEIEARPGVTRLP*PLHKGA
Trigger: GGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGAC...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTAGGGGAGTGGATGGCTaGGCCCATGTGGGCCTGACC +
Preference number: 4 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQIRGVDG*AHVGLT
Trigger: GGTCAGGCCCACATGGGCCCAGCCATCCACTCCCCT...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp TTGAAGGCACAGGAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGCAGGTAGGAGGCGGCTaGCTGAGTGCACAGTGTCGT +
Preference number: 4 (lower is better)
Translates to: LKAQEQELGYHLQGLSKMQVGGG*LSAQCR
Trigger: ACGACACTGTGCACTCAGTCAGCCGCCTCCTACCTG...CATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTCCTGTGCCTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGAGCAGAGACCTGGATGTaGGTGGCCACTGTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGAETWM*VATVFQ
Trigger: TTGGAAGACAGTGGCCACTCACATCCAGGTCTCTGC...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAAGACACTGTGGCCAGGTaGGGTGGTTCCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEDTVAR*GGSWVF
Trigger: GAAGACCCAGGAACCACCCCACCTGGCCACAGTGTC...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCGGGGCTGGCACAGGATaGCCAAATAAGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: KSRTALRAGIKEIEARPGGAGTG*PNKPST
Trigger: AGTGCTGGGCTTATTTGGCCATCCTGTGCCAGCCCC...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTCTGAGTCCAGAGGCCTaGCAAGGGACAGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQILSPEA*QGTGGA
Trigger: TGCCCCTCCTGTCCCTTGCCAGGCCTCTGGACTCAG...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTGTGGGGCAGATGGGGTaGCCAGGAGCAGCTCAGACT +
Preference number: 4 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQIVGQMG*PGAAQT
Trigger: AGTCTGAGCTGCTCCTGGCCACCCCATCTGCCCCAC...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp AGGCAAGCACACCAAACTCCATGGGGGCTGAATGCTGTGGTCTGTAGTGTCTGTAGTGCCCCAGCCTTTTaGAGGCACAGGAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: RQAHQTPWGLNAVVCSVCSAPAF*RHRNRS
Trigger: GCTCCTGTTCCTGTGCCTTCAAAAGGCTGGGGCACT...ACAGACACTACAGACCACAGCATTCAGCCCCCATGGAGTTTGGTGTGCTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp AGGCAAGCACACCAAACTCCATGGGGGCTGAATGCTGTGGTCTGTAGTGTCTGTCTGAGGCCAGGAGTTTaGGACTGGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: RQAHQTPWGLNAVVCSVCLRPGV*DWPGQH
Trigger: ATGTTGCCCAGGCCAGTCTCAAACTCCTGGCCTCAG...ACAGACACTACAGACCACAGCATTCAGCCCCCATGGAGTTTGGTGTGCTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAATGGTCACCAGTTCAGTaGAGCCCAGCTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEWSPVQ*SPALWL
Trigger: CAGCCACAGAGCTGGGCTCCACTGAACTGGTGACCA...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCGCACACCAAACTCCATaGGGGCTGAATGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: KSRTALRAGIKEIEARPGAHQTP*GLNAVV
Trigger: GACCACAGCATTCAGCCCCCATGGAGTTTGGTGTGC...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAACACAGGAACAGGAGCTaGGCTACCACCTTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEHRNRS*ATTFKG
Trigger: GCCCTTGAAGGTGGTAGCCCAGCTCCTGTTCCTGTG...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGTGGCATCTTAGGTTCTaGCAGATTGGGCCAATCTCA +
Preference number: 4 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQWHLRF*QIGPIS
Trigger: TGAGATTGGCCCAATCTGCCAGAACCTAAGATGCCA...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCGACCTCATGTCCACCTaGTTCAAGGTCACACGCCTG +
Preference number: 4 (lower is better)
Translates to: KSRTALRAGIKEIEARPGDLMST*FKVTRL
Trigger: CAGGCGTGTGACCTTGAACCAGGTGGACATGAGGTC...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp TCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTGGGCCCCAGGGCCCAAGAGTaGGAAAACAGCACCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SGSCHWGQNGILGSGRLGPRAQE*ENSTQN
Trigger: GTTCTGGGTGCTGTTTTCCCACTCTTGGGCCCTGGG...GCCCAATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGACACTGTCTTCCAAGCTaGGCACACAACAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGHCLPS*AHNRSL
Trigger: CAAGGACCTGTTGTGTGCCCAGCTTGGAAGACAGTG...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTAAACTTCCTACCGGCTaGCGGGGCCAGCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGKLPTG*RGQLGQ
Trigger: CTGTCCCAGCTGGCCCCGCCAGCCGGTAGGAAGTTT...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTTCGGGGAGGACTGCCTaGGGCCAGGAGTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGSGRTA*GQEFET
Trigger: AGTCTCAAACTCCTGGCCTCAGGCAGTCCTCCCCGA...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCGAAGTGAGCCGAAATTaGGTCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KSRTALRAGIKEIEARPGEVSRN*VTALQP
Trigger: AGGCTGGAGTGCAGTGACGCAATTTCGGCTCACTTC...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp TTGAAGGCACAGGAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGCACCTCCTCCCAAATaGAGGCTTGTGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LKAQEQELGYHLQGLSKMAPPPK*RLVALE
Trigger: TTCCAGAGCCACAAGCCTGCATTTGGGAGGAGGTGC...CATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTCCTGTGCCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTGAGGTTCTGACCCTGTaGAGGAGGGCAGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGEVLTL*RRAGRR
Trigger: CCTCCTACCTGCCCTCCTGCACAGGGTCAGAACCTC...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAAAAGTTCCAAGGAAGCTaGCCAGGGCGAAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEKFQGS*PGRSPG
Trigger: ACCTGGACTTCGCCCTGGGCAGCTTCCTTGGAACTT...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTGCCAGGCAGGAGCTGTaGCATCAGAGATTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGARQEL*HQRFPE
Trigger: CTCCGGGAATCTCTGATGCCACAGCTCCTGCCTGGC...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAAATTAGCTGGGCAAGGTaGAGCACCTGTAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEISWAR*STCSPT
Trigger: GGTGGGACTACAGGTGCTCCACCTTGCCCAGCTAAT...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAACCAAATGCAGGCTTGTaGCTCTGGAAGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEPNAGL*LWKLPL
Trigger: CAGTGGCAGCTTCCAGAGCCACAAGCCTGCATTTGG...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTGTGTCTTGGAGCAGCTaGAACCCCAGGTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGVSWSS*NPRWTL
Trigger: CAGGGTCCACCTGGGGTTCCAGCTGCTCCAAGACAC...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGACAGGGGCATCTGAGATaGGTTCATGGAGCAAATAGC +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGQGHLR*VHGANS
Trigger: GCTATTTGCTCCATGAACCCATCTCAGATGCCCCTG...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAAAAACTCCATGGGGGCTaGATGCTGTGGTCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEKLHGG*MLWSVV
Trigger: CACTACAGACCACAGCATTCAGCCCCCATGGAGTTT...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTCAGAACTCCACCTTCTaGCTCCTAGTCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQIQNSTF*LLVQCS
Trigger: GGAGCACTGGACTAGGAGTCAGAAGGTGGAGTTCTG...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTCTACTGCTTGTCACTTaGCCTCACCCTGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQILLLVT*PHPVTW
Trigger: CCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAG...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTTCAAGGTCACACGCCTaGCCTGGCCTCTACACAAAG +
Preference number: 4 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQISRSHA*PGLYTK
Trigger: CTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCTTGA...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCAAAGCAGGACGGCTCTaGGGGCAGGTATTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: KSRTALRAGIKEIEARPGKAGRL*GQVLKK
Trigger: TTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTT...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTCTCTCCCACACCTACTaGTTGTCACTTGACCTCACC +
Preference number: 4 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQILSHTY*LSLDLT
Trigger: GGTGAGGTCAAGTGACAAGCAGTAGGTGTGGGAGAG...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAAAGTGTCGTCCAGGAGTaGAAAGAGATGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSESVVQE*KEMVLS
Trigger: GGACAAGACCATCTCTTTCCACTCCTGGACGACACT...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTGGCTGTCAAAGATGGTaGGGTCTGAAGCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGGCQRW*GLKPKA
Trigger: TGCCTTTGGCTTCAGACCTCACCATCTTTGACAGCC...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGAAGCGAACCCATGAATTaGTTATTCACTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGSEPMN*LFTAAI
Trigger: AATGGCAGCAGTGAATAATCAATTCATGGGTTCGCT...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAATGGGGTACAGATACCTaGGAATCAGCAAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEWGTDT*ESAKSS
Trigger: GCTGGATTTTGCTGATTCTCAGGTATCTGTACCCCA...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp AGGCAAGCACACCAAACTCCATGGGGGCTGAATGCTGTGGTCTGTAGTGTCTGTAATGAGGTATTGATGTaGCGGCTCTGGGTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: RQAHQTPWGLNAVVCSVCNEVLM*RLWVSV
Trigger: AACTGAGACCCAGAGCCGTCACATCAATACCTCATT...ACAGACACTACAGACCACAGCATTCAGCCCCCATGGAGTTTGGTGTGCTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGACTCCAGGTGCTCTTATaGAGATCAAATGAGGTATTG +
Preference number: 4 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGLQVLL*RSNEVL
Trigger: CAATACCTCATTTGATCTTCATAAGAGCACCTGGAG...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp TTGAAGGCACAGGAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGCTGAAGCAGAAAGATTaGTTGAGCCCAGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LKAQEQELGYHLQGLSKMLKQKD*LSPGCN
Trigger: ATTGCAGCCTGGGCTCAAGCAATCTTTCTGCTTCAG...CATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTCCTGTGCCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTAGGAGTGGAAAGAGATaGTCTTGTCCCCAGACCCCA +
Preference number: 4 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGRSGKR*SCPQTP
Trigger: TGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCT...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp TTGAAGGCACAGGAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGTCCCTGACTACATCATaGATTCCGGTCCAGAACTTC +
Preference number: 4 (lower is better)
Translates to: LKAQEQELGYHLQGLSKMSLTTS*IPVQNF
Trigger: GAAGTTCTGGACCGGAATCCATGATGTAGTCAGGGA...CATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTCCTGTGCCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTAAAGATGGTGAGGTCTaGAGCCAAAGGCAAGCACAC +
Preference number: 4 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGKDGEV*SQRQAH
Trigger: GTGTGCTTGCCTTTGGCTTCAGACCTCACCATCTTT...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCAAGCAAGCGAACCCATaGATTGATTATTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: KSRTALRAGIKEIEARPGKQANP*IDYSLL
Trigger: CAGCAGTGAATAATCAATTCATGGGTTCGCTTGCTT...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAACCAGGAGGAGAACCTTaGATACAACCCCTCATTTTT +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEPGGEP*IQPLIF
Trigger: AAAAATGAGGGGTTGTATGCAAGGTTCTCCTCCTGG...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTCCACTGGGGTCAAAATaGCATCTTAGGTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGPLGSK*HLRFWQ
Trigger: CTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGG...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CAA 72 bp CATCTTAGGTTCTGGCAGATTGGGCCAATCTCAGGGTaGACCCTGGGGTACAGATACCTGAGAATCAGCAAA +
Preference number: 4 (lower is better)
Translates to: HLRFWQIGPISG*TLGYRYLRISK
Trigger: TTTGCTGATTCTCAGGTATCTGTACCCCAGGGTCAACCCTGAGATTGGCCCAATCTGCCAGAACCTAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR TCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTCAGGCAGAAAACATCTaGTGCACAGAACAGAACATG +
Preference number: 4 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQIQAENI*CTEQNM
Trigger: CATGTTCTGTTCTGTGCATCAGATGTTTTCTGCCTG...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp ATTATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCACCTGAGAGAGCTACCTaGCAGCATGTTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: IIHCCHLHQFKSRTALRAPERAT*QHVPSA
Trigger: AGCTGAAGGAACATGCTGGCAGGTAGCTCTCTCAGG...TGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTCCAAAGATGCTAAGCTaGAACAAGTTCCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQIPKMLS*NKFQGS
Trigger: GCTTCCTTGGAACTTGTTGCAGCTTAGCATCTTTGG...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAGGTTCTGGAAGCTGCCACTaGGGTCAAAATGGCATCTTA +
Preference number: 4 (lower is better)
Translates to: IHCCHLHQFKSRTALRAGSGSCH*GQNGIL
Trigger: TAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGA...ACCTGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CCA 90 bp ATTATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAAGACCTGGATGTGAGTaGCCACTGTCTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: IIHCCHLHQFKSRTALRARPGCE*PLSSKL
Trigger: CAGCTTGGAAGACAGTGGCCACTCACATCCAGGTCT...TGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAATTCACTGCTGCCATTTaGATCAGTTTAAAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEFTAAI*ISLKAG
Trigger: TCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAA...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR GCA 90 bp AGGCAAGCACACCAAACTCCATGGGGGCTGAATGCTGTGGTCTGTAGTGTCTGTGAATTGATTATTCACTaGTGCCATTTGCATCAGTTT +
Preference number: 4 (lower is better)
Translates to: RQAHQTPWGLNAVVCSVCELIIH*CHLHQF
Trigger: AAACTGATGCAAATGGCAGCAGTGAATAATCAATTC...ACAGACACTACAGACCACAGCATTCAGCCCCCATGGAGTTTGGTGTGCTTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
3UTR CAA 72 bp TCTTGTACTAAATCCCAAAGCAAGCGAACCCATGAATaGATTATTCACTGCTGCCATTTGCATCAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: SCTKSQSKRTHE*IIHCCHLHQFK
Trigger: TTTAAACTGATGCAAATGGCAGCAGTGAATAATCAATTCATGGGTTCGCTTGCTTTGGGATTTAGTACAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS CCA 90 bp GCCGGTTTCGGCCGCGGCGTGCGCAGGAGCCCGCAGGCCACGCAGTaGCGGACCAGCAGGTCGAAGCACTCGGCCGGGACGCAGGGCGTG +
Preference number: 5 (lower is better)
Translates to: AGFGRGVRRSPQATQ*RTSRSKHSAGTQGV
Trigger: CACGCCCTGCGTCCCGGCCGAGTGCTTCGACCTGCTGGTCCGCCACTGCGTGGCCTGCGGGCTCCTGCGCACGCCGCGGCCGAAACCGGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp AAGCTGCCCAGGGCGAAGTCCAGGTCAGGAGGTTCTGACCCTGTGCAGGAGGGCTCAGGGCCGGCCGTCTaGGTGGTCACCAGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: KLPRAKSRSGGSDPVQEGSGPAV*VVTSSV
Trigger: CACTGAACTGGTGACCACCAAGACGGCCGGCCCTGA...GCCCTCCTGCACAGGGTCAGAACCTCCTGACCTGGACTTCGCCCTGGGCAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGGCCGGCTCCCTGCTATaGTTGCTCAGGGCCGGCCGT +
Preference number: 5 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQAGSLL*LLRAGR
Trigger: ACGGCCGGCCCTGAGCAACAATAGCAGGGAGCCGGC...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp TTGAAGGCACAGGAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGGCTCTGGGGCGTCCTaGTCTCCGTCGGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LKAQEQELGYHLQGLSKMGSGAS*SPSGAS
Trigger: AGAGGCCCCCGACGGAGACAAGGACGCCCCAGAGCC...CATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTCCTGTGCCTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp AAGCTGCCCAGGGCGAAGTCCAGGTCAGGAGGTTCTGACCCTGTGCAGGAGGGCGCTGAAGCAGAAAGATaGCTTGAGCCCAGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: KLPRAKSRSGGSDPVQEGAEAER*LEPRLQ
Trigger: TTGCAGCCTGGGCTCAAGCAATCTTTCTGCTTCAGC...GCCCTCCTGCACAGGGTCAGAACCTCCTGACCTGGACTTCGCCCTGGGCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp AGGTCACACGCCTGCCCTGGCCTCTACACAAAGGAGCCTCCTGTAGGTCCCAGCTCCCACACCTACTGCTaGTCACTTGACCTCACCCTG +
Preference number: 5 (lower is better)
Translates to: RSHACPGLYTKEPPVGPSSHTYC*SLDLTL
Trigger: CAGGGTGAGGTCAAGTGACAAGCAGTAGGTGTGGGA...GCTGGGACCTACAGGAGGCTCCTTTGTGTAGAGGCCAGGGCAGGCGTGTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp AAAAGCAGGACGGCTCTGAGGGCAGGTATTAAAGAAATAGAGGCCAGGCCCGGCGGCTCCCTGCTATTGTaGCTCAGGGCCGGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: KSRTALRAGIKEIEARPGGSLLL*LRAGRL
Trigger: AAGACGGCCGGCCCTGAGCAACAATAGCAGGGAGCC...GCCGGGCCTGGCCTCTATTTCTTTAATACCTGCCCTCAGAGCCGTCCTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGGCACACAACAGGTCCTaGGGACAGGAAGCACTGAGT +
Preference number: 5 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQAHNRS*GQEALS
Trigger: ACTCAGTGCTTCCTGTCCCAAGGACCTGTTGTGTGC...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp AAGCTGCCCAGGGCGAAGTCCAGGTCAGGAGGTTCTGACCCTGTGCAGGAGGGCGCCAGGAGGAGAACCTaGCATACAACCCCTCATTTT +
Preference number: 5 (lower is better)
Translates to: KLPRAKSRSGGSDPVQEGARRRT*HTTPHF
Trigger: AAAATGAGGGGTTGTATGCAAGGTTCTCCTCCTGGC...GCCCTCCTGCACAGGGTCAGAACCTCCTGACCTGGACTTCGCCCTGGGCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp GTGTCGTCCAGGAGTGGAAAGAGATGGTCTTGTCCCCAGACCCCAGAGCAAGGAGGGCCAATCTCAGGGTaGACCCTGGGGTACAGATAC +
Preference number: 5 (lower is better)
Translates to: VSSRSGKRWSCPQTPEQGGPISG*TLGYRY
Trigger: GTATCTGTACCCCAGGGTCAACCCTGAGATTGGCCC...TCCTTGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCACTCCTGGACGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp TTGAAGGCACAGGAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGACAGAATGATGACCTaGTCCAGGGGCTCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: LKAQEQELGYHLQGLSKMDRMMT*SRGSGA
Trigger: CGCCCCAGAGCCCCTGGACAAGGTCATCATTCTGTC...CATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTCCTGTGCCTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTCTCCCAAATGCAGGCTaGTGGCTCTGGAAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQILPNAG*WLWKLP
Trigger: TGGCAGCTTCCAGAGCCACAAGCCTGCATTTGGGAG...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp GAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGGTGAGGTCTGAACCTACTGCTTGTCACTaGACCTCACCCTGTCACCTG +
Preference number: 5 (lower is better)
Translates to: EQELGYHLQGLSKMVRSEPTACH*TSPCHL
Trigger: CAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGG...TTCAGACCTCACCATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp TTGAAGGCACAGGAACAGGAGCTGGGCTACCACCTTCAAGGGCTGTCAAAGATGAGGCAGGAGAATCACTaGAACCAAGGAGTCGGAGGT +
Preference number: 5 (lower is better)
Translates to: LKAQEQELGYHLQGLSKMRQENH*NQGVGG
Trigger: ACCTCCGACTCCTTGGTTCAAGTGATTCTCCTGCCT...CATCTTTGACAGCCCTTGAAGGTGGTAGCCCAGCTCCTGTTCCTGTGCCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp ACACCTACTGCTTGTCACTTGACCTCACCCTGTCACCTGGCTCCCTGGGGGCAGTCCAGAACTTCCAGATaGTCTACAAAATGCCTATCT +
Preference number: 5 (lower is better)
Translates to: TPTACHLTSPCHLAPWGQSRTSR*STKCLS
Trigger: AGATAGGCATTTTGTAGACAATCTGGAAGTTCTGGA...CTGCCCCCAGGGAGCCAGGTGACAGGGTGAGGTCAAGTGACAAGCAGTAGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp ATTATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCATGGAAAGAGATGGTCTaGTCCCCAGACCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: IIHCCHLHQFKSRTALRAWKEMV*SPDPRA
Trigger: TGCTCTGGGGTCTGGGGACAAGACCATCTCTTTCCA...TGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp TGGCTCTGGAAGCTGCCACTGGGGTCAAAATGGCATCTTAGGTTCTGGCAGATTATTCACTGCTGCCATTaGCATCAGTTTAAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: WLWKLPLGSKWHLRFWQIIHCCH*HQFKSR
Trigger: CCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAAT...AATCTGCCAGAACCTAAGATGCCATTTTGACCCCAGTGGCAGCTTCCAGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS-3UTR CAA 90 bp ATTATTCACTGCTGCCATTTGCATCAGTTTAAAAGCAGGACGGCTCTGAGGGCAAAGCGAACCCATGAATaGATTATTCACTGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: IIHCCHLHQFKSRTALRAKRTHE*IIHCCH
Trigger: ATGGCAGCAGTGAATAATCAATTCATGGGTTCGCTT...TGCCCTCAGAGCCGTCCTGCTTTTAAACTGATGCAAATGGCAGCAGTGAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS GCA 72 bp CAGGGCTGCTGGCCCCGGCCGGTTTCGGCCGCGGCGTaGGCAGGAGCCCGCAGGCCACGCAGTGGCGGACCA +
Preference number: 6 (lower is better)
Translates to: QGCWPRPVSAAA*AGARRPRSGGP
Trigger: TGGTCCGCCACTGCGTGGCCTGCGGGCTCCTGCGCACGCCGCGGCCGAAACCGGCCGGGGCCAGCAGCCCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS GCA 72 bp ACTCCTGCGGCTGCAGCGCCGTCCTGGGCGCAGGGCTaGTGGCCCCGGCCGGTTTCGGCCGCGGCGTGCGCA +
Preference number: 6 (lower is better)
Translates to: TPAAAAPSWAQG*WPRPVSAAACA
Trigger: TGCGCACGCCGCGGCCGAAACCGGCCGGGGCCAGCAGCCCTGCGCCCAGGACGGCGCTGCAGCCGCAGGAGT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS GCA 72 bp GGGCTCTGGGGCGTCCTTGTCTCCGTCGGGGGCCTCTaGGGAGGACGCGCCGCGAAGCCGCCGCTGTCGCCG +
Preference number: 6 (lower is better)
Translates to: GLWGVLVSVGGL*GGRAAKPPLSP
Trigger: CGGCGACAGCGGCGGCTTCGCGGCGCGTCCTCCGCAGAGGCCCCCGACGGAGACAAGGACGCCCCAGAGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS CCA 72 bp GGCCGCGGCGTGCGCAGGAGCCCGCAGGCCACGCAGTaGCGGACCAGCAGGTCGAAGCACTCGGCCGGGACG +
Preference number: 6 (lower is better)
Translates to: GRGVRRSPQATQ*RTSRSKHSAGT
Trigger: CGTCCCGGCCGAGTGCTTCGACCTGCTGGTCCGCCACTGCGTGGCCTGCGGGCTCCTGCGCACGCCGCGGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS GCA 72 bp GCTCACCAGACCCACCAGGACCAGCGCCAGGACCAGTaGCAGGCCCAGCAGCGCGGGGGCGCCAAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: AHQTHQDQRQDQ*QAQQRGGAKEQ
Trigger: CTGCTCTTTGGCGCCCCCGCGCTGCTGGGCCTGGCACTGGTCCTGGCGCTGGTCCTGGTGGGTCTGGTGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291232.5
CDS CAA 72 bp GTGGCATCAGAGATTCCCGGAGACAGAATGATGACCTaGTCCAGGGGCTCTGGGGCGTCCTTGTCTCCGTCG +
Preference number: 6 (lower is better)
Translates to: VASEIPGDRMMT*SRGSGASLSPS
Trigger: CGACGGAGACAAGGACGCCCCAGAGCCCCTGGACAAGGTCATCATTCTGTCTCCGGGAATCTCTGATGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291232.5