RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFRSF11A (Homo sapiens)

Ensembl gene IDs: ENSG00000141655

Ensembl transcript IDs: ENST00000269485.11, ENST00000586569.3, ENST00000587697.1, ENST00000592013.1, ENST00000616710.4, ENST00000617039.4, ENST00000639222.1

Found 737 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCTGCCCTCGCGAGCCCTGGCTCCGAGCTTCGGGCTCCCAGCCATaGGGGGCGCTCAAGCCTTGGCCCCGCCTTGCTCCTGCACCGGCC +
Preference number: 1 (lower is better)
Translates to: CCPREPWLRASGSQP*GALKPWPRLAPAPA
Trigger: GGCCGGTGCAGGAGCAAGGCGGGGCCAAGGCTTGAGCGCCCCCCATGGCTGGGAGCCCGAAGCTCGGAGCCAGGGCTCGCGAGGGCAGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616710.4
3UTR CCA 90 bp GTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTaGGGCAGAGGCTGCGGTGCTGCCCTCGCGAGCCCTGGCTCCGAG +
Preference number: 1 (lower is better)
Translates to: VVFLDCTDRSLGGRG*GRGCGAALASPGSE
Trigger: CTCGGAGCCAGGGCTCGCGAGGGCAGCACCGCAGCCTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR CCA 90 bp AGAATGCCGGGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTaGCCGGGGCTGGGGCAGAGGCTGCGGTGCTGCCCTCGCGAGCCC +
Preference number: 1 (lower is better)
Translates to: RMPGGLPRLYRSIPG*PGLGQRLRCCPREP
Trigger: GGGCTCGCGAGGGCAGCACCGCAGCCTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACCCGGCATTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR TCA 90 bp GTTGGTCCAGGGCGGCTCCCCCTGCACCACTTGGCTTGGCTTCAGTaGTCCCACCTAGACCCCGCCTGTGCTCACTGCTGGCACCGCCAC +
Preference number: 1 (lower is better)
Translates to: VGPGRLPLHHLAWLQ*SHLDPACAHCWHRH
Trigger: GTGGCGGTGCCAGCAGTGAGCACAGGCGGGGTCTAGGTGGGATCACTGAAGCCAAGCCAAGTGGTGCAGGGGGAGCCGCCCTGGACCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 90 bp GAAAAGCCCATTTCCTGGAAGGCAAAGTGGGCAGAGAATGCCGGGTaGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCT +
Preference number: 1 (lower is better)
Translates to: EKPISWKAKWAENAG*SSSTVPIDPWVAGA
Trigger: AGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACCCGGCATTCTCTGCCCACTTTGCCTTCCAGGAAATGGGCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR GCA 90 bp GGCAGGTTTCTGCTTGTTCTCAGGCTCGACACCACCATGAGAGCATaGCCAGCTAGGTGGCTGGAAGGATGGGAGACAGGTGGAGAGCAC +
Preference number: 1 (lower is better)
Translates to: GRFLLVLRLDTTMRA*PARWLEGWETGGEH
Trigger: GTGCTCTCCACCTGTCTCCCATCCTTCCAGCCACCTAGCTGGGCATGCTCTCATGGTGGTGTCGAGCCTGAGAACAAGCAGAAACCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 90 bp GGGGGTCAGAAATTCCACAGACAGCCCCTTCCCAGAAGCCTCCTCTaGCGCTTGGAGCAGAGCATTGTCTCGTCTTCTCTGCTCCGAACC +
Preference number: 1 (lower is better)
Translates to: GGQKFHRQPLPRSLL*RLEQSIVSSSLLRT
Trigger: GGTTCGGAGCAGAGAAGACGAGACAATGCTCTGCTCCAAGCGCCAGAGGAGGCTTCTGGGAAGGGGCTGTCTGTGGAATTTCTGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 90 bp CTGTGCAGAGCCATGCGGGTGGGTCAGGAGGAGCAGCAAGTCTTGTaGGTGTGCCTGCCCACTGGGACATTTATTCGGTCCTCCTCTTTG +
Preference number: 1 (lower is better)
Translates to: LCRAMRVGQEEQQVL*VCLPTGTFIRSSSL
Trigger: CAAAGAGGAGGACCGAATAAATGTCCCAGTGGGCAGGCACACCCACAAGACTTGCTGCTCCTCCTGACCCACCCGCATGGCTCTGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 90 bp AACAGTCCTGTCAACTGTGGAGAAGGTGCGTCCCTCCGACCTAGTTaGAAAGAGTGGGAAGGTGTCCCAGGTGGGCAGCAGAGCTTGGTT +
Preference number: 1 (lower is better)
Translates to: NSPVNCGEGASLRPS*KEWEGVPGGQQSLV
Trigger: AACCAAGCTCTGCTGCCCACCTGGGACACCTTCCCACTCTTTGCAACTAGGTCGGAGGGACGCACCTTCTCCACAGTTGACAGGACTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 90 bp GCCCAGTGTCAGGTCCCTCCTCTTCTCTGGCAAAGCTTTAGTGGTTaGAAGACTTCACCAGCAGGGCTCTGGGGGTCAGAAATTCCACAG +
Preference number: 1 (lower is better)
Translates to: AQCQVPPLLWQSFSG*KTSPAGLWGSEIPQ
Trigger: CTGTGGAATTTCTGACCCCCAGAGCCCTGCTGGTGAAGTCTTGCAACCACTAAAGCTTTGCCAGAGAAGAGGAGGGACCTGACACTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 90 bp AGAGCCATGCGGGTGGGTCAGGAGGAGCAGCAAGTCTTGTGGGTGTaGCTGCCCACTGGGACATTTATTCGGTCCTCCTCTTTGTTGAAA +
Preference number: 1 (lower is better)
Translates to: RAMRVGQEEQQVLWV*LPTGTFIRSSSLLK
Trigger: TTTCAACAAAGAGGAGGACCGAATAAATGTCCCAGTGGGCAGGCACACCCACAAGACTTGCTGCTCCTCCTGACCCACCCGCATGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 90 bp CTCTGGCAAAGCTTTAGTGGTTGCAAGACTTCACCAGCAGGGCTCTaGGGGTCAGAAATTCCACAGACAGCCCCTTCCCAGAAGCCTCCT +
Preference number: 1 (lower is better)
Translates to: LWQSFSGCKTSPAGL*GSEIPQTAPSQKPP
Trigger: AGGAGGCTTCTGGGAAGGGGCTGTCTGTGGAATTTCTGACCCCCAGAGCCCTGCTGGTGAAGTCTTGCAACCACTAAAGCTTTGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR TCA 90 bp CTGAGCATCCGTGGGCATGGGGACAGTCCTCATCAATTCACTTCCTaGAAAGCCCATTTCCTGGAAGGCAAAGTGGGCAGAGAATGCCGG +
Preference number: 1 (lower is better)
Translates to: LSIRGHGDSPHQFTS*KAHFLEGKVGRECR
Trigger: CCGGCATTCTCTGCCCACTTTGCCTTCCAGGAAATGGGCTTTTCAGGAAGTGAATTGATGAGGACTGTCCCCATGCCCACGGATGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR GCA 90 bp ATATGCTGCTCCCCCATCCCTTGGATCTGGGCTGCCTTTGTGACCTaGTTTGGCCCACAGAATGTGGCAGAAGTGACAGCATGCCAGTTA +
Preference number: 1 (lower is better)
Translates to: ICCSPIPWIWAAFVT*FGPQNVAEVTACQL
Trigger: TAACTGGCATGCTGTCACTTCTGCCACATTCTGTGGGCCAAAGCAGGTCACAAAGGCAGCCCAGATCCAAGGGATGGGGGAGCAGCATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 90 bp TGGGAAGGTGTCCCAGGTGGGCAGCAGAGCTTGGTTATAGTTACGTaGTCCGACATGATGACTGAGATGGCTCCTGAGCCCAGGAATGAA +
Preference number: 1 (lower is better)
Translates to: WEGVPGGQQSLVIVT*SDMMTEMAPEPRNE
Trigger: TTCATTCCTGGGCTCAGGAGCCATCTCAGTCATCATGTCGGACCACGTAACTATAACCAAGCTCTGCTGCCCACCTGGGACACCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR TCA 90 bp TCGACCGCTACCACCCCAGCATTTCCAGCAGGAGGGAAAAACCAGTaGTCCACAGTCATGCTCTTCAGCTGGGCATTTGTGGCCAGTAAA +
Preference number: 1 (lower is better)
Translates to: STATTPAFPAGGKNQ*STVMLFSWAFVASK
Trigger: TTTACTGGCCACAAATGCCCAGCTGAAGAGCATGACTGTGGATCACTGGTTTTTCCCTCCTGCTGGAAATGCTGGGGTGGTAGCGGTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR GCA 90 bp CCAAAAGCGGGTTATGCAACTTGTGCCCAGCGCAGCCCACAGCAATaGACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAACAA +
Preference number: 1 (lower is better)
Translates to: PKAGYATCAQRSPQQ*TRLTCHQRLSKSKQ
Trigger: TTGTTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 90 bp TTTGAATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTTGTaGCCAGCGCAGCCCACAGCAATGCACCAGACTCACATGCCATCA +
Preference number: 1 (lower is better)
Translates to: FECFVSSSKSGLCNL*PAQPTAMHQTHMPS
Trigger: TGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCATTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 90 bp CTCATCAATTCACTTCCTGAAAAGCCCATTTCCTGGAAGGCAAAGTaGGCAGAGAATGCCGGGTGGTCTTCCTCGACTGTACCGATCGAT +
Preference number: 1 (lower is better)
Translates to: LINSLPEKPISWKAK*AENAGWSSSTVPID
Trigger: ATCGATCGGTACAGTCGAGGAAGACCACCCGGCATTCTCTGCCCACTTTGCCTTCCAGGAAATGGGCTTTTCAGGAAGTGAATTGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR GCA 90 bp GCAACTTGTGCCCAGCGCAGCCCACAGCAATGCACCAGACTCACATaGCATCAGAGACTGTCAAAGAGCAAACAACTCAAAACTACGTTT +
Preference number: 1 (lower is better)
Translates to: ATCAQRSPQQCTRLT*HQRLSKSKQLKTTF
Trigger: AAACGTAGTTTTGAGTTGTTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCTGCGCTGGGCACAAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 90 bp ATGTCGTTTTTCTCACGACTTAAAGTCTATACAGCCTTTGTTTCCTaGGCTACCCCTGCCCGTGAGAAACCAAGAGCCTGGGTGAGAGCA +
Preference number: 1 (lower is better)
Translates to: MSFFSRLKVYTAFVS*ATPAREKPRAWVRA
Trigger: TGCTCTCACCCAGGCTCTTGGTTTCTCACGGGCAGGGGTAGCCCAGGAAACAAAGGCTGTATAGACTTTAAGTCGTGAGAAAAACGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR TCA 90 bp AGGACAGTCAGATCTCTACTACTGGAATCTTCTAGGAACTGCCAGTaGGTGCTTGGTTGTCTCTCATCTCACGTCATCCTCAAACCAGCC +
Preference number: 1 (lower is better)
Translates to: RTVRSLLLESSRNCQ*VLGCLSSHVILKPA
Trigger: GGCTGGTTTGAGGATGACGTGAGATGAGAGACAACCAAGCACTCACTGGCAGTTCCTAGAAGATTCCAGTAGTAGAGATCTGACTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR TCA 90 bp GCCAGTTTTATGAATGGGATGAAGGAAAGAGATGTTAGCCTAGCATaGGTTTCAACCTCACCCTGGGGTCAGGATAACTGGGTAAGAGGG +
Preference number: 1 (lower is better)
Translates to: ASFMNGMKERDVSLA*VSTSPWGQDNWVRG
Trigger: CCCTCTTACCCAGTTATCCTGACCCCAGGGTGAGGTTGAAACTCATGCTAGGCTAACATCTCTTTCCTTCATCCCATTCATAAAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 90 bp GAGACAGGGAGGGAAAGTAGTGTAGGACAGTCAGATCTCTACTACTaGAATCTTCTAGGAACTGCCAGTGAGTGCTTGGTTGTCTCTCAT +
Preference number: 1 (lower is better)
Translates to: ETGRESSVGQSDLYY*NLLGTASECLVVSH
Trigger: ATGAGAGACAACCAAGCACTCACTGGCAGTTCCTAGAAGATTCCAGTAGTAGAGATCTGACTGTCCTACACTACTTTCCCTCCCTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR TCA 90 bp CAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATaGCAAACTAGCCCACATAGCCTTTCAACCTTCACATCTGGCTAT +
Preference number: 1 (lower is better)
Translates to: QCVILPKRGEAPGIP*QTSPHSLSTFTSGY
Trigger: ATAGCCAGATGTGAAGGTTGAAAGGCTATGTGGGCTAGTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 90 bp ACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGTTCTTTATGTTaGCTAAGGAGTCCCATAAATTACAGAACTGTCCTGTGCTTCTCC +
Preference number: 1 (lower is better)
Translates to: TDPPGCAVISCSSLC*LRSPINYRTVLCFS
Trigger: GGAGAAGCACAGGACAGTTCTGTAATTTATGGGACTCCTTAGCCAACATAAAGAACTGCAGGAAATAACTGCACAGCCAGGAGGATCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR TCA 90 bp ATTTCCTTCCACCTGGAGCGTCCTCTAGGCTTCTCACAAGCGGGATaGTGCCAAGAGAAAGGCACCTTTAGGATAATAAGTTTTCTTAAA +
Preference number: 1 (lower is better)
Translates to: ISFHLERPLGFSQAG*CQEKGTFRIISFLK
Trigger: TTTAAGAAAACTTATTATCCTAAAGGTGCCTTTCTCTTGGCATCATCCCGCTTGTGAGAAGCCTAGAGGACGCTCCAGGTGGAAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR TCA 90 bp TCATGCTCTTCAGCTGGGCATTTGTGGCCAGTAAAGTCTGGGCAGTaGCTACTATTAGTGCTTTCTTTTATAACCTCCCAGATGTGCAAA +
Preference number: 1 (lower is better)
Translates to: SCSSAGHLWPVKSGQ*LLLVLSFITSQMCK
Trigger: TTTGCACATCTGGGAGGTTATAAAAGAAAGCACTAATAGTAGTCACTGCCCAGACTTTACTGGCCACAAATGCCCAGCTGAAGAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR CCA 90 bp TGCATTTTCTATCACACAGGGAAGAGGGTAGTGTCACCAGCTCCTTaGTTAGTACGAAGATCTGGTAACAGGCCTGTAATTTTGTCATTT +
Preference number: 1 (lower is better)
Translates to: CIFYHTGKRVVSPAP*LVRRSGNRPVILSF
Trigger: AAATGACAAAATTACAGGCCTGTTACCAGATCTTCGTACTAACCAAGGAGCTGGTGACACTACCCTCTTCCCTGTGTGATAGAAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 90 bp CACGTCATCCTCAAACCAGCCCTAAAGACTAATATTAGTACCTTCTaGTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTAGCTGCA +
Preference number: 1 (lower is better)
Translates to: HVILKPALKTNISTF*LRMLKTRLRSDVAA
Trigger: TGCAGCTACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATTAGTCTTTAGGGCTGGTTTGAGGATGACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 90 bp GCAAACAACTCAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTaGTCAAGCTCACCCTTGTATAATCGTAACAAGAGTTTGTTTGTT +
Preference number: 1 (lower is better)
Translates to: ANNSKLRFFHQRQHL*SSSPLYNRNKSLFV
Trigger: AACAAACAAACTCTTGTTACGATTATACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTGAGTTGTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR TCA 90 bp TCACCCTTGTATAATCGTAACAAGAGTTTGTTTGTTGAGCTGAGGTaGAGGGTGAACACTCGATCTTTTATCTGTTTATATGCAGGTTTC +
Preference number: 1 (lower is better)
Translates to: SPLYNRNKSLFVELR*RVNTRSFICLYAGF
Trigger: GAAACCTGCATATAAACAGATAAAAGATCGAGTGTTCACCCTTCACCTCAGCTCAACAAACAAACTCTTGTTACGATTATACAAGGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR GCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGGCAGGGGAGACATCTaGCCCAGTGCGGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEGRGDI*PSAAGC
Trigger: GCAGCCCGCCGCACTGGGGCAGATGTCTCCCCTGCC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGCTGGGTGGCCGGGGCTaGGGCAGAGGCTGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVLGGRG*GRGCGA
Trigger: AGCACCGCAGCCTCTGCCCCAGCCCCGGCCACCCAG...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGTACCGATCGATCCCTaGGTGGCCGGGGCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEVPIDP*VAGAGA
Trigger: TGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTAC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGTCGGGCTCCCAGCCATaGGGGGCGCTCAAGCCTTGG +
Preference number: 2 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAESGSQP*GALKPW
Trigger: CCAAGGCTTGAGCGCCCCCCATGGCTGGGAGCCCGA...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616710.4
3UTR-3UTR GCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGCCTTGGCCCCGCCTTaGTCCTGCACCGGCCTCGAG +
Preference number: 2 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVALAPP*SCTGLE
Trigger: CTCGAGGCCGGTGCAGGAGCAAGGCGGGGCCAAGGC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616710.4
3UTR-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGGGGCGCTCAAGCCTTaGCCCCGCCTTGCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVGALKP*PRLAPA
Trigger: TGCAGGAGCAAGGCGGGGCCAAGGCTTGAGCGCCCC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616710.4
3UTR-3UTR GCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGAGACATCTGCCCCAGTaGGGCGGGCTGCTGAGCATC +
Preference number: 2 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVRHLPQ*GGLLSI
Trigger: GATGCTCAGCAGCCCGCCGCACTGGGGCAGATGTCT...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGGCTGGGGCAGAGGCTaGGGTGCTGCCCTCGCGAGC +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVGWGRG*GAALAS
Trigger: GCTCGCGAGGGCAGCACCGCAGCCTCTGCCCCAGCC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGAAAGTGGGCAGAGAATaGCGGGTGGTCTTCCTCGAC +
Preference number: 2 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEKVGRE*RVVFLD
Trigger: GTCGAGGAAGACCACCCGGCATTCTCTGCCCACTTT...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTCTGGGTGGCCGGGGCTaGGGCAGAGGCTGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVLGGRG*GRGCGA
Trigger: AGCACCGCAGCCTCTGCCCCAGCCCCGGCCACCCAG...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGCACTGCACTCTAGCCTaGGCCAGAGCCAGGTTGCCA +
Preference number: 2 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVHCTLA*ARARLP
Trigger: TGGCAACCTGGCTCTGGCCCAGGCTAGAGTGCAGTG...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTAGTGCGGCGGGCTGCTaGGCATCCGTGGGCATGGGG +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVSAAGC*ASVGMG
Trigger: CCCCATGCCCACGGATGCTCAGCAGCCCGCCGCACT...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTGGGCAGAGGCTGCGGTaGTGCCCTCGCGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFGQRLR*CPREPW
Trigger: CCAGGGCTCGCGAGGGCAGCACCGCAGCCTCTGCCC...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGGGCTGGGGCAGAGGCTaGGGTGCTGCCCTCGCGAGC +
Preference number: 2 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQGWGRG*GAALAS
Trigger: GCTCGCGAGGGCAGCACCGCAGCCTCTGCCCCAGCC...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTCTGGGTGGCCGGGGCTaGGGCAGAGGCTGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFLGGRG*GRGCGA
Trigger: AGCACCGCAGCCTCTGCCCCAGCCCCGGCCACCCAG...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGCAGAGAATGCCGGGTaGTCTTCCTCGACTGTACCG +
Preference number: 2 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVAENAG*SSSTVP
Trigger: CGGTACAGTCGAGGAAGACCACCCGGCATTCTCTGC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTAGTGCGGCGGGCTGCTaGGCATCCGTGGGCATGGGG +
Preference number: 2 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFSAAGC*ASVGMG
Trigger: CCCCATGCCCACGGATGCTCAGCAGCCCGCCGCACT...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGTTACTGCTGCGAGTTTaGGGAGTGGCAGGGGAGACA +
Preference number: 2 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVLLLRV*GVAGET
Trigger: TGTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAA...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCCTGGGTGGCCGGGGCTaGGGCAGAGGCTGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCLGGRG*GRGCGA
Trigger: AGCACCGCAGCCTCTGCCCCAGCCCCGGCCACCCAG...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGGCAGGGGAGACATCTaGCCCAGTGCGGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAGRGDI*PSAAGC
Trigger: GCAGCCCGCCGCACTGGGGCAGATGTCTCCCCTGCC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCGCCCCGCCTTGCTCCTaGACCGGCCTCGAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCAPPCS*TGLEAF
Trigger: GAAGGCCTCGAGGCCGGTGCAGGAGCAAGGCGGGGC...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616710.4
3UTR-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGAGCATCCGTGGGCATaGGGACAGTCCTCATCAATT +
Preference number: 2 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVEHPWA*GQSSSI
Trigger: AATTGATGAGGACTGTCCCCATGCCCACGGATGCTC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGATCACTTGGATTGCTTaGGCCCAGGAGTTAGAGGCT +
Preference number: 2 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVITWIA*AQELEA
Trigger: AGCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGAT...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTCGTGGCCTGCAGCTGTaGTCCCAGCTACTCCGAAGG +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVRGLQL*SQLLRR
Trigger: CCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACG...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGCCACAAATTACTGCTaGGAGTTTGAGGAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVATNYC*EFEEWQ
Trigger: CTGCCACTCCTCAAACTCGCAGCAGTAATTTGTGGC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGTACCGATCGATCCCTaGGTGGCCGGGGCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAVPIDP*VAGAGA
Trigger: TGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTAC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGCCACGCAGTGCCCTGTaGTGGACAGATGGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKPRSAL*WTDGKG
Trigger: CCCCTTGCCATCTGTCCACCACAGGGCACTGCGTGG...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGCAGCCATGGGGGTGTTaGTCCAGGGCGGCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQQPWGC*SRAAPP
Trigger: AGGGGGAGCCGCCCTGGACCAACACCCCCATGGCTG...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR TCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTCGTGGCCTGCAGCTGTaGTCCCAGCTACTCCGAAGG +
Preference number: 2 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIRGLQL*SQLLRR
Trigger: CCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACG...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGAGACATCTGCCCCAGTaGGGCGGGCTGCTGAGCATC +
Preference number: 2 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQRHLPQ*GGLLSI
Trigger: GATGCTCAGCAGCCCGCCGCACTGGGGCAGATGTCT...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGCTGCTGAGCATCCGTaGGCATGGGGACAGTCCTCA +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVAAEHP*AWGQSS
Trigger: TGAGGACTGTCCCCATGCCCACGGATGCTCAGCAGC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTGGAGGAAGCTGGGCGTaGCCTGCAGCTGTGATCCCA +
Preference number: 2 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIGGSWA*PAAVIP
Trigger: TGGGATCACAGCTGCAGGCCACGCCCAGCTTCCTCC...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGGGAGGAAGCTGGGCGTaGCCTGCAGCTGTGATCCCA +
Preference number: 2 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQGGSWA*PAAVIP
Trigger: TGGGATCACAGCTGCAGGCCACGCCCAGCTTCCTCC...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGGAGCAGCAAGTCTTGTaGGTGTGCCTGCCCACTGGG +
Preference number: 2 (lower is better)
Translates to: MTEMAPEPRNEQVSETGREQQVL*VCLPTG
Trigger: CCCAGTGGGCAGGCACACCCACAAGACTTGCTGCTC...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR GCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAAGACATCTGCCCCAGTaGGGCGGGCTGCTGAGCATC +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPARHLPQ*GGLLSI
Trigger: GATGCTCAGCAGCCCGCCGCACTGGGGCAGATGTCT...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTGCTGCTGAGCATCCGTaGGCATGGGGACAGTCCTCA +
Preference number: 2 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFAAEHP*AWGQSS
Trigger: TGAGGACTGTCCCCATGCCCACGGATGCTCAGCAGC...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGGGCAGAGGCTGCGGTaGTGCCCTCGCGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYGQRLR*CPREPW
Trigger: CCAGGGCTCGCGAGGGCAGCACCGCAGCCTCTGCCC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGCGCAGCCCACAGCAATaGACCAGACTCACATGCCAT +
Preference number: 2 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKRSPQQ*TRLTCH
Trigger: ATGGCATGTGAGTCTGGTGCATTGCTGTGGGCTGCG...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR GCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACCAGGGCGGCTCCCCCTaGACCACTTGGCTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNQGGSP*TTWLGF
Trigger: GAAGCCAAGCCAAGTGGTGCAGGGGGAGCCGCCCTG...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTGCAGAGAATGCCGGGTaGTCTTCCTCGACTGTACCG +
Preference number: 2 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFAENAG*SSSTVP
Trigger: CGGTACAGTCGAGGAAGACCACCCGGCATTCTCTGC...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTTGCGAGTTTGAGGAGTaGCAGGGGAGACATCTGCCC +
Preference number: 2 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFCEFEE*QGRHLP
Trigger: GGGCAGATGTCTCCCCTGCCACTCCTCAAACTCGCA...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGGCAGAGCCATGCGGGTaGGTCAGGAGGAGCAGCAAG +
Preference number: 2 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKAEPCG*VRRSSK
Trigger: CTTGCTGCTCCTCCTGACCCACCCGCATGGCTCTGC...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR TCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTTTCTCACAAGCGGGATaGTGCCAAGAGAAAGGCACC +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVFSQAG*CQEKGT
Trigger: GGTGCCTTTCTCTTGGCATCATCCCGCTTGTGAGAA...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAGGCAGGGGAGACATCTaGCCCAGTGCGGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: INYRTVLCFSTENPNRPLGRGDI*PSAAGC
Trigger: GCAGCCCGCCGCACTGGGGCAGATGTCTCCCCTGCC...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATCGATCGATCCCTGGGTaGCCGGGGCTGGGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDRSIPG*PGLGQR
Trigger: CCTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCG...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCGCAGAGAATGCCGGGTaGTCTTCCTCGACTGTACCG +
Preference number: 2 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCAENAG*SSSTVP
Trigger: CGGTACAGTCGAGGAAGACCACCCGGCATTCTCTGC...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGAGCATCCGTGGGCATaGGGACAGTCCTCATCAATT +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVEHPWA*GQSSSI
Trigger: AATTGATGAGGACTGTCCCCATGCCCACGGATGCTC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGGCTGCTGAGCATCCGTaGGCATGGGGACAGTCCTCA +
Preference number: 2 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKAAEHP*AWGQSS
Trigger: TGAGGACTGTCCCCATGCCCACGGATGCTCAGCAGC...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCTGCGAGTTTGAGGAGTaGCAGGGGAGACATCTGCCC +
Preference number: 2 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCCEFEE*QGRHLP
Trigger: GGGCAGATGTCTCCCCTGCCACTCCTCAAACTCGCA...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTCTCCGAAGGTTGAGGTaGGAGGATCACTTGGATTGC +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVLRRLR*EDHLDC
Trigger: GCAATCCAAGTGATCCTCCCACCTCAACCTTCGGAG...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTGTAATCCCAGTACTTTaGGAGGCCGAGGCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIVIPVL*EAEAGG
Trigger: TCCTCCAGCCTCGGCCTCCCAAAGTACTGGGATTAC...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGGTAATCCCAGTACTTTaGGAGGCCGAGGCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQVIPVL*EAEAGG
Trigger: TCCTCCAGCCTCGGCCTCCCAAAGTACTGGGATTAC...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR CAA 90 bp CCTGCCCACTGGGACATTTATTCGGTCCTCCTCTTTGTTGAAACCTaGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGTTCCGCAGT +
Preference number: 2 (lower is better)
Translates to: PAHWDIYSVLLFVET*GDIGLFCRSRQFRS
Trigger: ACTGCGGAACTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAGGACCGAATAAATGTCCCAGTGGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR TCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATTACTGCTGCGAGTTTaGGGAGTGGCAGGGGAGACA +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPALLLRV*GVAGET
Trigger: TGTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAA...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGATCACTTGGATTGCTTaGGCCCAGGAGTTAGAGGCT +
Preference number: 2 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRITWIA*AQELEA
Trigger: AGCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGAT...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR TCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATGCTTACCAAGTACCTaGGTGCCTCTGCCAGCATGG +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPACLPST*VPLPAW
Trigger: CCATGCTGGCAGAGGCACTCAGGTACTTGGTAAGCA...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGTTCTCACAAGCGGGATaGTGCCAAGAGAAAGGCACC +
Preference number: 2 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQFSQAG*CQEKGT
Trigger: GGTGCCTTTCTCTTGGCATCATCCCGCTTGTGAGAA...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGGAGGGAAAAACCAGTaGTCCACAGTCATGCTCTTC +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVGGKNQ*STVMLF
Trigger: GAAGAGCATGACTGTGGATCACTGGTTTTTCCCTCC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGTCTAGGAACTGCCAGTaGGTGCTTGGTTGTCTCTCA +
Preference number: 2 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRSRNCQ*VLGCLS
Trigger: TGAGAGACAACCAAGCACTCACTGGCAGTTCCTAGA...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR TCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCCCTGCCCGCTGGAGATaGACGTGGAGTTACTGTTTC +
Preference number: 2 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCPARWR*TWSYCF
Trigger: GAAACAGTAACTCCACGTTCATCTCCAGCGGGCAGG...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616710.4
3UTR-3UTR GCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGGGCAGAGGCTGCGGTaGTGCCCTCGCGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: RYFNIHCSILLISLGRETGQRLR*CPREPW
Trigger: CCAGGGCTCGCGAGGGCAGCACCGCAGCCTCTGCCC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGGACATAGGATTGTTTTaGCGCAGTAGGCAGTTCCGC +
Preference number: 2 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRDIGLF*RSRQFR
Trigger: GCGGAACTGCCTACTGCGGCAAAACAATCCTATGTC...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAGTACCGATCGATCCCTaGGTGGCCGGGGCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: INYRTVLCFSTENPNRPLVPIDP*VAGAGA
Trigger: TGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTAC...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGGAGCATCCGTGGGCATaGGGACAGTCCTCATCAATT +
Preference number: 2 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQEHPWA*GQSSSI
Trigger: AATTGATGAGGACTGTCCCCATGCCCACGGATGCTC...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTCTCCGAAGGTTGAGGTaGGAGGATCACTTGGATTGC +
Preference number: 2 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFLRRLR*EDHLDC
Trigger: GCAATCCAAGTGATCCTCCCACCTCAACCTTCGGAG...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGATCACTTGGATTGCTTaGGCCCAGGAGTTAGAGGCT +
Preference number: 2 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQITWIA*AQELEA
Trigger: AGCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGAT...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATTCTCACAAGCGGGATaGTGCCAAGAGAAAGGCACC +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAFSQAG*CQEKGT
Trigger: GGTGCCTTTCTCTTGGCATCATCCCGCTTGTGAGAA...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTGGAGGGAAAAACCAGTaGTCCACAGTCATGCTCTTC +
Preference number: 2 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIGGKNQ*STVMLF
Trigger: GAAGAGCATGACTGTGGATCACTGGTTTTTCCCTCC...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTTTTGCGGGGAACCAGTaGTCACTGGGTAACAAAAGA +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVFAGNQ*SLGNKR
Trigger: TCTTTTGTTACCCAGTGAGCACTGGTTCCCCGCAAA...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGAGTGATCCACAGTCATaGTCTTCAGCTGGGCATTTG +
Preference number: 2 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKSDPQS*SSAGHL
Trigger: CAAATGCCCAGCTGAAGAGCATGACTGTGGATCACT...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTGAAAAGCCCATTTCCTaGAAGGCAAAGTGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFEKPIS*KAKWAE
Trigger: CTCTGCCCACTTTGCCTTCCAGGAAATGGGCTTTTC...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGGAAAAGCCCATTTCCTaGAAGGCAAAGTGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQEKPIS*KAKWAE
Trigger: CTCTGCCCACTTTGCCTTCCAGGAAATGGGCTTTTC...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCCTCCGAAGGTTGAGGTaGGAGGATCACTTGGATTGC +
Preference number: 2 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCLRRLR*EDHLDC
Trigger: GCAATCCAAGTGATCCTCCCACCTCAACCTTCGGAG...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACCCCATCCCTTGGATCTaGGCTGCCTTTGTGACCTGC +
Preference number: 2 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNPIPWI*AAFVTC
Trigger: GCAGGTCACAAAGGCAGCCCAGATCCAAGGGATGGG...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGTGTGCCAAAGGAATGTaGAAGCAGTACAGTAGGCTC +
Preference number: 2 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRCAKGM*KQYSRL
Trigger: GAGCCTACTGTACTGCTTCCACATTCCTTTGGCACA...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACGCCTCCTCTGGCGCTTaGAGCAGAGCATTGTCTCGT +
Preference number: 2 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNASSGA*SRALSR
Trigger: ACGAGACAATGCTCTGCTCCAAGCGCCAGAGGAGGC...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACCCCAGAAGCCTCCTCTaGCGCTTGGAGCAGAGCATT +
Preference number: 2 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNPRSLL*RLEQSI
Trigger: AATGCTCTGCTCCAAGCGCCAGAGGAGGCTTCTGGG...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR TCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTAACTTTATTCTTCCTTaGACTTCCCGGGCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVNFILP*TSRALS
Trigger: AGAAAGGGCCCGGGAAGTTCAAGGAAGAATAAAGTT...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTAAGTGCTCAGTGAGATaGCAGTCACAGCAGAAACTC +
Preference number: 2 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIKCSVR*QSQQKL
Trigger: GAGTTTCTGCTGTGACTGTCATCTCACTGAGCACTT...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGAAGCGAAGTGCTCAGTaGGATGACAGTCACAGCAGA +
Preference number: 2 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQKRSAQ*DDSHSR
Trigger: TCTGCTGTGACTGTCATCTCACTGAGCACTTCGCTT...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR TCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAAGCGAAGTGCTCAGTaGGATGACAGTCACAGCAGA +
Preference number: 2 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCKRSAQ*DDSHSR
Trigger: TCTGCTGTGACTGTCATCTCACTGAGCACTTCGCTT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAAAGCGAAGTGCTCAGTaGGATGACAGTCACAGCAGA +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAKRSAQ*DDSHSR
Trigger: TCTGCTGTGACTGTCATCTCACTGAGCACTTCGCTT...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGCAAGAGTTTGTTTGTTaGGCTGAGGTGAAGGGTGAA +
Preference number: 2 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKQEFVC*AEVKGE
Trigger: TTCACCCTTCACCTCAGCTCAACAAACAAACTCTTG...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR GCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATAGACATCTGCCCCAGTaGGGCGGGCTGCTGAGCATC +
Preference number: 2 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYRHLPQ*GGLLSI
Trigger: GATGCTCAGCAGCCCGCCGCACTGGGGCAGATGTCT...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGCCACAAATTACTGCTaGGAGTTTGAGGAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAATNYC*EFEEWQ
Trigger: CTGCCACTCCTCAAACTCGCAGCAGTAATTTGTGGC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGGCCACAAATTACTGCTaGGAGTTTGAGGAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQATNYC*EFEEWQ
Trigger: CTGCCACTCCTCAAACTCGCAGCAGTAATTTGTGGC...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR GCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTAGTGCCACAAATTACTaGTGCGAGTTTGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFSATNY*CEFEEW
Trigger: CCACTCCTCAAACTCGCAGCAGTAATTTGTGGCACT...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTGAGGATCACTTGGATTaGTTGAGCCCAGGAGTTAGA +
Preference number: 2 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFEDHLD*LSPGVR
Trigger: TCTAACTCCTGGGCTCAAGCAATCCAAGTGATCCTC...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGGATCCTCCTGGCTGTaGAGTTATTTCCTGCAGTTC +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAGSSWL*SYFLQF
Trigger: GAACTGCAGGAAATAACTGCACAGCCAGGAGGATCC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATTGAAGTTCATCACCTaGCCGCTGGAGATGAACGTG +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPALKFIT*PLEMNV
Trigger: CACGTTCATCTCCAGCGGGCAGGTGATGAACTTCAA...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616710.4
3UTR-3UTR CCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGTACCGATCGATCCCTaGGTGGCCGGGGCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: ISRYFNIHCSILLISLGRVPIDP*VAGAGA
Trigger: TGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTAC...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGGAAAAGCCCATTTCCTaGAAGGCAAAGTGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQEKPIS*KAKWAE
Trigger: CTCTGCCCACTTTGCCTTCCAGGAAATGGGCTTTTC...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGGTAACCTTGAACTCCTaGACTCAAGCATCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQVTLNS*TQASSC
Trigger: GCAGGAGGATGCTTGAGTCCAGGAGTTCAAGGTTAC...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAACCGGGTCATTGTAAATaGGTAAGCAAACCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKPGHCK*VSKPGQ
Trigger: CTGGCCTGGTTTGCTTACCCATTTACAATGACCCGG...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGCTTTGTGACCTGCTTTaGCCCACAGAATGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQLCDLL*PTECGR
Trigger: TCTGCCACATTCTGTGGGCCAAAGCAGGTCACAAAG...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGGTGTCCCTTTCATTGTaGGAATCTATAGTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRVSLSL*ESIVLC
Trigger: GCACAGCACTATAGATTCCCACAATGAAAGGGACAC...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR TCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTCATCAATTCACTTCCTaGAAAGCCCATTTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVHQFTS*KAHFLE
Trigger: TTCCAGGAAATGGGCTTTTCAGGAAGTGAATTGATG...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAAGTGCCACAAATTACTaGTGCGAGTTTGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPASATNY*CEFEEW
Trigger: CCACTCCTCAAACTCGCAGCAGTAATTTGTGGCACT...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCGAGGATCACTTGGATTaGTTGAGCCCAGGAGTTAGA +
Preference number: 2 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCEDHLD*LSPGVR
Trigger: TCTAACTCCTGGGCTCAAGCAATCCAAGTGATCCTC...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATGCTGCTGAGCATCCGTaGGCATGGGGACAGTCCTCA +
Preference number: 2 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDAAEHP*AWGQSS
Trigger: TGAGGACTGTCCCCATGCCCACGGATGCTCAGCAGC...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTACACTGCACTCTAGCCTaGGCCAGAGCCAGGTTGCCA +
Preference number: 2 (lower is better)
Translates to: INYRTVLCFSTENPNRPLHCTLA*ARARLP
Trigger: TGGCAACCTGGCTCTGGCCCAGGCTAGAGTGCAGTG...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATCACTGCACTCTAGCCTaGGCCAGAGCCAGGTTGCCA +
Preference number: 2 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYHCTLA*ARARLP
Trigger: TGGCAACCTGGCTCTGGCCCAGGCTAGAGTGCAGTG...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGGAACCAGTGCTCACTaGGTAACAAAAGATAAAACC +
Preference number: 2 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVGTSAH*VTKDKT
Trigger: GGTTTTATCTTTTGTTACCCAGTGAGCACTGGTTCC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCGTCATGCTCTTCAGCTaGGCATTTGTGGCCAGTAAA +
Preference number: 2 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCVMLFS*AFVASK
Trigger: TTTACTGGCCACAAATGCCCAGCTGAAGAGCATGAC...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGCGTGGCCTGCAGCTGTaGTCCCAGCTACTCCGAAGG +
Preference number: 2 (lower is better)
Translates to: ISRYFNIHCSILLISLGRRGLQL*SQLLRR
Trigger: CCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACG...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTCGTGGCCTGCAGCTGTaGTCCCAGCTACTCCGAAGG +
Preference number: 2 (lower is better)
Translates to: RYFNIHCSILLISLGRETRGLQL*SQLLRR
Trigger: CCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACG...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGGTAAAGTCTGGGCAGTaGCTACTATTAGTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQVKSGQ*LLLVLS
Trigger: AGAAAGCACTAATAGTAGTCACTGCCCAGACTTTAC...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGTTTGCGGGGAACCAGTaGTCACTGGGTAACAAAAGA +
Preference number: 2 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKFAGNQ*SLGNKR
Trigger: TCTTTTGTTACCCAGTGAGCACTGGTTCCCCGCAAA...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGCAGAGAATGCCGGGTaGTCTTCCTCGACTGTACCG +
Preference number: 2 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYAENAG*SSSTVP
Trigger: CGGTACAGTCGAGGAAGACCACCCGGCATTCTCTGC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATTGCGAGTTTGAGGAGTaGCAGGGGAGACATCTGCCC +
Preference number: 2 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYCEFEE*QGRHLP
Trigger: GGGCAGATGTCTCCCCTGCCACTCCTCAAACTCGCA...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACAGGCCTCAAGAAGCCTaGCAGGTTTCTGCTTGTTCT +
Preference number: 2 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNRPQEA*QVSACS
Trigger: AGAACAAGCAGAAACCTGCCAGGCTTCTTGAGGCCT...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR TCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCACATCAATTCACTTCCTaGAAAGCCCATTTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAHQFTS*KAHFLE
Trigger: TTCCAGGAAATGGGCTTTTCAGGAAGTGAATTGATG...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTATGCTTACCAAGTACCTaGGTGCCTCTGCCAGCATGG +
Preference number: 2 (lower is better)
Translates to: INYRTVLCFSTENPNRPLCLPST*VPLPAW
Trigger: CCATGCTGGCAGAGGCACTCAGGTACTTGGTAAGCA...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTGCTTACCAAGTACCTaGGTGCCTCTGCCAGCATGG +
Preference number: 2 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDCLPST*VPLPAW
Trigger: CCATGCTGGCAGAGGCACTCAGGTACTTGGTAAGCA...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGAACTTTATTCTTCCTTaGACTTCCCGGGCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKNFILP*TSRALS
Trigger: AGAAAGGGCCCGGGAAGTTCAAGGAAGAATAAAGTT...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR GCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAAAAGTGGGCAGAGAATaGCGGGTGGTCTTCCTCGAC +
Preference number: 2 (lower is better)
Translates to: INYRTVLCFSTENPNRPLKVGRE*RVVFLD
Trigger: GTCGAGGAAGACCACCCGGCATTCTCTGCCCACTTT...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACACACTGCACTCTAGCCTaGGCCAGAGCCAGGTTGCCA +
Preference number: 2 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTHCTLA*ARARLP
Trigger: TGGCAACCTGGCTCTGGCCCAGGCTAGAGTGCAGTG...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGTAATCCCAGTACTTTaGGAGGCCGAGGCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYVIPVL*EAEAGG
Trigger: TCCTCCAGCCTCGGCCTCCCAAAGTACTGGGATTAC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGTTTCAGCTCTTTCACTaGGTACCCAGGCTGTATTTT +
Preference number: 2 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQFQLFH*VPRLYF
Trigger: AAAATACAGCCTGGGTACCCAGTGAAAGAGCTGAAA...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CAA 90 bp AACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGTTCTTTATGTaGGCTAAGGAGTCCCATAAATTACAGAACTGTCCTGTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: NGSSWLCSYFLQFFM*AKESHKLQNCPVLL
Trigger: GAGAAGCACAGGACAGTTCTGTAATTTATGGGACTCCTTAGCCAACATAAAGAACTGCAGGAAATAACTGCACAGCCAGGAGGATCCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGGAATCTATAGTGCTGTaGATTAAGGGAATTCAATCA +
Preference number: 2 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKESIVL*IKGIQS
Trigger: TGATTGAATTCCCTTAATGCACAGCACTATAGATTC...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGCAAGCTGCAGCAACTTaGAGTTTTAGAAATTTGCTT +
Preference number: 2 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQQAAAT*SFRNLL
Trigger: AAGCAAATTTCTAAAACTCCAAGTTGCTGCAGCTTG...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGTTACTGCTGCGAGTTTaGGGAGTGGCAGGGGAGACA +
Preference number: 2 (lower is better)
Translates to: ISRYFNIHCSILLISLGRLLLRV*GVAGET
Trigger: TGTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAA...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCACATTTTTCAGAATATaGAAGTCCCACCACATGTTC +
Preference number: 2 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCTFFRI*KSHHMF
Trigger: GAACATGTGGTGGGACTTTCATATTCTGAAAAATGT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTTGCTTACCAAGTACCTaGGTGCCTCTGCCAGCATGG +
Preference number: 2 (lower is better)
Translates to: RYFNIHCSILLISLGRETCLPST*VPLPAW
Trigger: CCATGCTGGCAGAGGCACTCAGGTACTTGGTAAGCA...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTGGTGGTTTGTTACACTaGAATAATCCCATTTTCCCC +
Preference number: 2 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCGGLLH*NNPIFP
Trigger: GGGGAAAATGGGATTATTTCAGTGTAACAAACCACC...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR TCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACTGTCATGTCAGAAGATaGCAACTTTTGGGTCAACCA +
Preference number: 2 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNCHVRR*QLLGQP
Trigger: TGGTTGACCCAAAAGTTGTCATCTTCTGACATGACA...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAAAAGTGGGCAGAGAATaGCGGGTGGTCTTCCTCGAC +
Preference number: 2 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTKVGRE*RVVFLD
Trigger: GTCGAGGAAGACCACCCGGCATTCTCTGCCCACTTT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAGGATCCTCCTGGCTGTaGAGTTATTTCCTGCAGTTC +
Preference number: 2 (lower is better)
Translates to: INYRTVLCFSTENPNRPLGSSWL*SYFLQF
Trigger: GAACTGCAGGAAATAACTGCACAGCCAGGAGGATCC...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGAAAAGCCCATTTCCTaGAAGGCAAAGTGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYEKPIS*KAKWAE
Trigger: CTCTGCCCACTTTGCCTTCCAGGAAATGGGCTTTTC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAACCAACGGATCCTCCTaGCTGTGCAGTTATTTCCTG +
Preference number: 2 (lower is better)
Translates to: INYRTVLCFSTENPNRPLTNGSS*LCSYFL
Trigger: CAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGT...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATAGTGCCACAAATTACTaGTGCGAGTTTGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYSATNY*CEFEEW
Trigger: CCACTCCTCAAACTCGCAGCAGTAATTTGTGGCACT...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATGAGGATCACTTGGATTaGTTGAGCCCAGGAGTTAGA +
Preference number: 2 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDEDHLD*LSPGVR
Trigger: TCTAACTCCTGGGCTCAAGCAATCCAAGTGATCCTC...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGCTCCGAAGGTTGAGGTaGGAGGATCACTTGGATTGC +
Preference number: 2 (lower is better)
Translates to: ISRYFNIHCSILLISLGRLRRLR*EDHLDC
Trigger: GCAATCCAAGTGATCCTCCCACCTCAACCTTCGGAG...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTCATTCAAACTGCTCTTaGGAAATTCATTCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCHSNCS*EIHSSF
Trigger: GAAGGAAGAATGAATTTCTCAAGAGCAGTTTGAATG...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAGCCACAAATTACTGCTaGGAGTTTGAGGAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTATNYC*EFEEWQ
Trigger: CTGCCACTCCTCAAACTCGCAGCAGTAATTTGTGGC...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTAAGTGCTCAGTGAGATaGCAGTCACAGCAGAAACTC +
Preference number: 2 (lower is better)
Translates to: RYFNIHCSILLISLGRETKCSVR*QSQQKL
Trigger: GAGTTTCTGCTGTGACTGTCATCTCACTGAGCACTT...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTAGTGCCACAAATTACTaGTGCGAGTTTGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: RYFNIHCSILLISLGRETSATNY*CEFEEW
Trigger: CCACTCCTCAAACTCGCAGCAGTAATTTGTGGCACT...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR CAA 90 bp AAACCAGCCCTAAAGACTAATATTAGTACCTTCTGCTTACGCATGTaGAAAACAAGGCTAAGAAGTGATGTAGCTGCACAAGATAAGTCC +
Preference number: 2 (lower is better)
Translates to: KPALKTNISTFCLRM*KTRLRSDVAAQDKS
Trigger: GGACTTATCTTGTGCAGCTACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATTAGTCTTTAGGGCTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CAA 90 bp AGTAGCTTTATTTGTAATCTCCCCAAACAGGAAAGAACCCATATGTaGGTGAATAAACCGCAGTACATCCATACAATGGACTACTACTCA +
Preference number: 2 (lower is better)
Translates to: SSFICNLPKQERTHM*VNKPQYIHTMDYYS
Trigger: TGAGTAGTAGTCCATTGTATGGATGTACTGCGGTTTATTCACCAACATATGGGTTCTTTCCTGTTTGGGGAGATTACAAATAAAGCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR TCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACACATCAATTCACTTCCTaGAAAGCCCATTTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTHQFTS*KAHFLE
Trigger: TTCCAGGAAATGGGCTTTTCAGGAAGTGAATTGATG...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATACATTTTTCAGAATATaGAAGTCCCACCACATGTTC +
Preference number: 2 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDTFFRI*KSHHMF
Trigger: GAACATGTGGTGGGACTTTCATATTCTGAAAAATGT...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTAGAGTGTTTAGGGCTTTaGATGCTTTGTCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVECLGL*MLCLLF
Trigger: GAAGAGGAGACAAAGCATTCAAAGCCCTAAACACTC...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACATACAGAACTGTCCTGTaGTTCTCCACTGAAAATCCT +
Preference number: 2 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTYRTVL*FSTENP
Trigger: AGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTA...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGGAACCAGTGCTCACTaGGTAACAAAAGATAAAACC +
Preference number: 2 (lower is better)
Translates to: ISRYFNIHCSILLISLGRGTSAH*VTKDKT
Trigger: GGTTTTATCTTTTGTTACCCAGTGAGCACTGGTTCC...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAGGAACCAGTGCTCACTaGGTAACAAAAGATAAAACC +
Preference number: 2 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTGTSAH*VTKDKT
Trigger: GGTTTTATCTTTTGTTACCCAGTGAGCACTGGTTCC...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTATGCAGTTCTTTATGTTaGCTAAGGAGTCCCATAAAT +
Preference number: 2 (lower is better)
Translates to: INYRTVLCFSTENPNRPLCSSLC*LRSPIN
Trigger: ATTTATGGGACTCCTTAGCCAACATAAAGAACTGCA...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR TCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAACATTTTTCAGAATATaGAAGTCCCACCACATGTTC +
Preference number: 2 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTTFFRI*KSHHMF
Trigger: GAACATGTGGTGGGACTTTCATATTCTGAAAAATGT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACATGTGCAGTTATTTCCTaGAGTTCTTTATGTTGGCTA +
Preference number: 2 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTCAVIS*SSLCWL
Trigger: TAGCCAACATAAAGAACTGCAGGAAATAACTGCACA...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTCAAGCTGCAGCAACTTaGAGTTTTAGAAATTTGCTT +
Preference number: 2 (lower is better)
Translates to: RYFNIHCSILLISLGRETQAAAT*SFRNLL
Trigger: AAGCAAATTTCTAAAACTCCAAGTTGCTGCAGCTTG...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACATGCAGTTCTTTATGTTaGCTAAGGAGTCCCATAAAT +
Preference number: 2 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTCSSLC*LRSPIN
Trigger: ATTTATGGGACTCCTTAGCCAACATAAAGAACTGCA...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR CCA 72 bp CGCGAGCCCTGGCTCCGAGCTTCGGGCTCCCAGCCATaGGGGGCGCTCAAGCCTTGGCCCCGCCTTGCTCCT +
Preference number: 3 (lower is better)
Translates to: REPWLRASGSQP*GALKPWPRLAP
Trigger: AGGAGCAAGGCGGGGCCAAGGCTTGAGCGCCCCCCATGGCTGGGAGCCCGAAGCTCGGAGCCAGGGCTCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616710.4
3UTR TCA 72 bp GGGCGGCTCCCCCTGCACCACTTGGCTTGGCTTCAGTaGTCCCACCTAGACCCCGCCTGTGCTCACTGCTGG +
Preference number: 3 (lower is better)
Translates to: GRLPLHHLAWLQ*SHLDPACAHCW
Trigger: CCAGCAGTGAGCACAGGCGGGGTCTAGGTGGGATCACTGAAGCCAAGCCAAGTGGTGCAGGGGGAGCCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGGCAGCCATGGGGGTGTaGGTCCAGGGCGGCTCCCCC +
Preference number: 3 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKAAMGV*VQGGSP
Trigger: GGGGGAGCCGCCCTGGACCAACACCCCCATGGCTGC...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGGGGGCGCTCAAGCCTaGGCCCCGCCTTGCTCCTGC +
Preference number: 3 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVGGAQA*APPCSC
Trigger: GCAGGAGCAAGGCGGGGCCAAGGCTTGAGCGCCCCC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616710.4
3UTR CCA 72 bp ACATCTGCCCCAGTGCGGCGGGCTGCTGAGCATCCGTaGGCATGGGGACAGTCCTCATCAATTCACTTCCTG +
Preference number: 3 (lower is better)
Translates to: TSAPVRRAAEHP*AWGQSSSIHFL
Trigger: CAGGAAGTGAATTGATGAGGACTGTCCCCATGCCCACGGATGCTCAGCAGCCCGCCGCACTGGGGCAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR GCA 72 bp GGGGATATGCTGCTCCCCCATCCCTTGGATCTGGGCTaGCTTTGTGACCTGCTTTGGCCCACAGAATGTGGC +
Preference number: 3 (lower is better)
Translates to: GDMLLPHPLDLG*LCDLLWPTECG
Trigger: GCCACATTCTGTGGGCCAAAGCAGGTCACAAAGGCAGCCCAGATCCAAGGGATGGGGGAGCAGCATATCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR TCA 72 bp GCAGGTTTCTGCTTGTTCTCAGGCTCGACACCACCATaGGAGCATGCCCAGCTAGGTGGCTGGAAGGATGGG +
Preference number: 3 (lower is better)
Translates to: AGFCLFSGSTPP*EHAQLGGWKDG
Trigger: CCCATCCTTCCAGCCACCTAGCTGGGCATGCTCTCATGGTGGTGTCGAGCCTGAGAACAAGCAGAAACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR TCA 72 bp GGGCTACCCCTGCCCGTGAGAAACCAAGAGCCTGGGTaGGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCC +
Preference number: 3 (lower is better)
Translates to: GLPLPVRNQEPG*EQKLSLTPVPS
Trigger: GGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGGTTTCTCACGGGCAGGGGTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 72 bp CTGCTTGTTCTCAGGCTCGACACCACCATGAGAGCATaGCCAGCTAGGTGGCTGGAAGGATGGGAGACAGGT +
Preference number: 3 (lower is better)
Translates to: LLVLRLDTTMRA*PARWLEGWETG
Trigger: ACCTGTCTCCCATCCTTCCAGCCACCTAGCTGGGCATGCTCTCATGGTGGTGTCGAGCCTGAGAACAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 72 bp CTACTCCGAAGGTTGAGGTGGGAGGATCACTTGGATTaGTTGAGCCCAGGAGTTAGAGGCTGCACCGGGCTA +
Preference number: 3 (lower is better)
Translates to: LLRRLRWEDHLD*LSPGVRGCTGL
Trigger: TAGCCCGGTGCAGCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGATCCTCCCACCTCAACCTTCGGAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR CCA 72 bp ATTTCCTGGAAGGCAAAGTGGGCAGAGAATGCCGGGTaGTCTTCCTCGACTGTACCGATCGATCCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: ISWKAKWAENAG*SSSTVPIDPWV
Trigger: CACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACCCGGCATTCTCTGCCCACTTTGCCTTCCAGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR CCA 72 bp GTCCCAGGTGGGCAGCAGAGCTTGGTTATAGTTACGTaGTCCGACATGATGACTGAGATGGCTCCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: VPGGQQSLVIVT*SDMMTEMAPEP
Trigger: GGGCTCAGGAGCCATCTCAGTCATCATGTCGGACCACGTAACTATAACCAAGCTCTGCTGCCCACCTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 72 bp TCCTGGGCTACCCCTGCCCGTGAGAAACCAAGAGCCTaGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCC +
Preference number: 3 (lower is better)
Translates to: SWATPAREKPRA*VRAKAFIDSSA
Trigger: GGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGGTTTCTCACGGGCAGGGGTAGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 72 bp CAGGTCCCTCCTCTTCTCTGGCAAAGCTTTAGTGGTTaGAAGACTTCACCAGCAGGGCTCTGGGGGTCAGAA +
Preference number: 3 (lower is better)
Translates to: QVPPLLWQSFSG*KTSPAGLWGSE
Trigger: TTCTGACCCCCAGAGCCCTGCTGGTGAAGTCTTGCAACCACTAAAGCTTTGCCAGAGAAGAGGAGGGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 72 bp AGCTTTAGTGGTTGCAAGACTTCACCAGCAGGGCTCTaGGGGTCAGAAATTCCACAGACAGCCCCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: SFSGCKTSPAGL*GSEIPQTAPSQ
Trigger: CTGGGAAGGGGCTGTCTGTGGAATTTCTGACCCCCAGAGCCCTGCTGGTGAAGTCTTGCAACCACTAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGAGGTGGGAGGATCACTaGGATTGCTTGAGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKRWEDH*DCLSPG
Trigger: TCCTGGGCTCAAGCAATCCAAGTGATCCTCCCACCT...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 72 bp GGAGGAGCAGCAAGTCTTGTGGGTGTGCCTGCCCACTaGGACATTTATTCGGTCCTCCTCTTTGTTGAAACC +
Preference number: 3 (lower is better)
Translates to: GGAASLVGVPAH*DIYSVLLFVET
Trigger: GGTTTCAACAAAGAGGAGGACCGAATAAATGTCCCAGTGGGCAGGCACACCCACAAGACTTGCTGCTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGAGGTGGGAGGATCACTaGGATTGCTTGAGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQRWEDH*DCLSPG
Trigger: TCCTGGGCTCAAGCAATCCAAGTGATCCTCCCACCT...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATAGCCTTGGCCCCGCCTaGCTCCTGCACCGGCCTCGA +
Preference number: 3 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDSLGPA*LLHRPR
Trigger: TCGAGGCCGGTGCAGGAGCAAGGCGGGGCCAAGGCT...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616710.4
3UTR TCA 72 bp ACCACCCCAGCATTTCCAGCAGGAGGGAAAAACCAGTaGTCCACAGTCATGCTCTTCAGCTGGGCATTTGTG +
Preference number: 3 (lower is better)
Translates to: TTPAFPAGGKNQ*STVMLFSWAFV
Trigger: CACAAATGCCCAGCTGAAGAGCATGACTGTGGATCACTGGTTTTTCCCTCCTGCTGGAAATGCTGGGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR GCA 72 bp GCCCAGCGCAGCCCACAGCAATGCACCAGACTCACATaGCATCAGAGACTGTCAAAGAGCAAACAACTCAAA +
Preference number: 3 (lower is better)
Translates to: AQRSPQQCTRLT*HQRLSKSKQLK
Trigger: TTTGAGTTGTTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCTGCGCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAAATTACTGCTGCGAGTTaGAGGAGTGGCAGGGGAGAC +
Preference number: 3 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKITAAS*RSGRGD
Trigger: GTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAAT...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCTTCAGCTGGGCATTaGTGGCCAGTAAAGTCTGGG +
Preference number: 3 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVISSAGH*WPVKSG
Trigger: CCCAGACTTTACTGGCCACAAATGCCCAGCTGAAGA...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACAGCGGGTTATGCAACTaGTGCCCAGCGCAGCCCACA +
Preference number: 3 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNSGLCN*CPAQPT
Trigger: TGTGGGCTGCGCTGGGCACAAGTTGCATAACCCGCT...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGTCTTCAGCTGGGCATTaGTGGCCAGTAAAGTCTGGG +
Preference number: 3 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQSSAGH*WPVKSG
Trigger: CCCAGACTTTACTGGCCACAAATGCCCAGCTGAAGA...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 72 bp TTTGAATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATaGAACTTGTGCCCAGCGCAGCCCACAGCAATGCAC +
Preference number: 3 (lower is better)
Translates to: FECFVSSSKSGL*NLCPAQPTAMH
Trigger: GTGCATTGCTGTGGGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCATTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 72 bp TTCTCACGACTTAAAGTCTATACAGCCTTTGTTTCCTaGGCTACCCCTGCCCGTGAGAAACCAAGAGCCTGG +
Preference number: 3 (lower is better)
Translates to: FSRLKVYTAFVS*ATPAREKPRAW
Trigger: CCAGGCTCTTGGTTTCTCACGGGCAGGGGTAGCCCAGGAAACAAAGGCTGTATAGACTTTAAGTCGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGCAACTTTATTCTTCCTaGAACTTCCCGGGCCCTTTC +
Preference number: 3 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQQLYSS*NFPGPF
Trigger: GAAAGGGCCCGGGAAGTTCAAGGAAGAATAAAGTTG...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR TCA 72 bp TGCCCACTGGGACATTTATTCGGTCCTCCTCTTTGTTaGAACCTTGGGGGACATAGGATTGTTTTGCCGCAG +
Preference number: 3 (lower is better)
Translates to: CPLGHLFGPPLC*NLGGHRIVLPQ
Trigger: CTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAGGACCGAATAAATGTCCCAGTGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 72 bp TTCCAGCAGGAGGGAAAAACCAGTGATCCACAGTCATaGTCTTCAGCTGGGCATTTGTGGCCAGTAAAGTCT +
Preference number: 3 (lower is better)
Translates to: FQQEGKTSDPQS*SSAGHLWPVKS
Trigger: AGACTTTACTGGCCACAAATGCCCAGCTGAAGAGCATGACTGTGGATCACTGGTTTTTCCCTCCTGCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCCAACTTTATTCTTCCTaGAACTTCCCGGGCCCTTTC +
Preference number: 3 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCQLYSS*NFPGPF
Trigger: GAAAGGGCCCGGGAAGTTCAAGGAAGAATAAAGTTG...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAAAAGCTCACAGTAACCTaGAACTCCTGGACTCAAGCA +
Preference number: 3 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKKLTVT*NSWTQA
Trigger: TGCTTGAGTCCAGGAGTTCAAGGTTACTGTGAGCTT...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGCTCTTTGTTGAAACCTaGGGGGACATAGGATTGTTT +
Preference number: 3 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRLFVET*GDIGLF
Trigger: AAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAG...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR TCA 72 bp ATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATaGCAAACTAGCCCACATAGCCTTTCAACCTTCACA +
Preference number: 3 (lower is better)
Translates to: ILPKRGEAPGIP*QTSPHSLSTFT
Trigger: TGTGAAGGTTGAAAGGCTATGTGGGCTAGTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATATTACTGCTGCGAGTTaGAGGAGTGGCAGGGGAGAC +
Preference number: 3 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDITAAS*RSGRGD
Trigger: GTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAAT...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAATTACTGCTGCGAGTTaGAGGAGTGGCAGGGGAGAC +
Preference number: 3 (lower is better)
Translates to: INYRTVLCFSTENPNRPLITAAS*RSGRGD
Trigger: GTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAAT...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAACGATGATGTCGCCCTaGAAGTTCATCACCTGCCCG +
Preference number: 3 (lower is better)
Translates to: INYRTVLCFSTENPNRPLTMMSP*KFITCP
Trigger: CGGGCAGGTGATGAACTTCAAGGGCGACATCATCGT...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616710.4
3UTR TCA 72 bp ATGAATGGGATGAAGGAAAGAGATGTTAGCCTAGCATaGGTTTCAACCTCACCCTGGGGTCAGGATAACTGG +
Preference number: 3 (lower is better)
Translates to: MNGMKERDVSLA*VSTSPWGQDNW
Trigger: CCAGTTATCCTGACCCCAGGGTGAGGTTGAAACTCATGCTAGGCTAACATCTCTTTCCTTCATCCCATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR TCA 72 bp AGATCTCTACTACTGGAATCTTCTAGGAACTGCCAGTaGGTGCTTGGTTGTCTCTCATCTCACGTCATCCTC +
Preference number: 3 (lower is better)
Translates to: RSLLLESSRNCQ*VLGCLSSHVIL
Trigger: GAGGATGACGTGAGATGAGAGACAACCAAGCACTCACTGGCAGTTCCTAGAAGATTCCAGTAGTAGAGATCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 72 bp CTCTACTACTGGAATCTTCTAGGAACTGCCAGTGAGTaGTTGGTTGTCTCTCATCTCACGTCATCCTCAAAC +
Preference number: 3 (lower is better)
Translates to: LYYWNLLGTASE*LVVSHLTSSSN
Trigger: GTTTGAGGATGACGTGAGATGAGAGACAACCAAGCACTCACTGGCAGTTCCTAGAAGATTCCAGTAGTAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 72 bp TATCACACAGGGAAGAGGGTAGTGTCACCAGCTCCTTaGTTAGTACGAAGATCTGGTAACAGGCCTGTAATT +
Preference number: 3 (lower is better)
Translates to: YHTGKRVVSPAP*LVRRSGNRPVI
Trigger: AATTACAGGCCTGTTACCAGATCTTCGTACTAACCAAGGAGCTGGTGACACTACCCTCTTCCCTGTGTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAGATCACTTGGATTGCTaGAGCCCAGGAGTTAGAGGC +
Preference number: 3 (lower is better)
Translates to: INYRTVLCFSTENPNRPLDHLDC*SPGVRG
Trigger: GCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGATC...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTGGAGTTTTAGAAATTaGCTTACCAAGTACCTGAGT +
Preference number: 3 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIWSFRN*LTKYLS
Trigger: ACTCAGGTACTTGGTAAGCAAATTTCTAAAACTCCA...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR TCA 72 bp TCAGCTGGGCATTTGTGGCCAGTAAAGTCTGGGCAGTaGCTACTATTAGTGCTTTCTTTTATAACCTCCCAG +
Preference number: 3 (lower is better)
Translates to: SAGHLWPVKSGQ*LLLVLSFITSQ
Trigger: CTGGGAGGTTATAAAAGAAAGCACTAATAGTAGTCACTGCCCAGACTTTACTGGCCACAAATGCCCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR CCA 72 bp AGGGAAAGTAGTGTAGGACAGTCAGATCTCTACTACTaGAATCTTCTAGGAACTGCCAGTGAGTGCTTGGTT +
Preference number: 3 (lower is better)
Translates to: RESSVGQSDLYY*NLLGTASECLV
Trigger: AACCAAGCACTCACTGGCAGTTCCTAGAAGATTCCAGTAGTAGAGATCTGACTGTCCTACACTACTTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTAGGTGGGAGGATCACTaGGATTGCTTGAGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: RYFNIHCSILLISLGRETRWEDH*DCLSPG
Trigger: TCCTGGGCTCAAGCAATCCAAGTGATCCTCCCACCT...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACACAGCTACTCCGAAGGTaGAGGTGGGAGGATCACTTG +
Preference number: 3 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTQLLRR*RWEDHL
Trigger: CAAGTGATCCTCCCACCTCAACCTTCGGAGTAGCTG...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGCAGCTACTCCGAAGGTaGAGGTGGGAGGATCACTTG +
Preference number: 3 (lower is better)
Translates to: ISRYFNIHCSILLISLGRQLLRR*RWEDHL
Trigger: CAAGTGATCCTCCCACCTCAACCTTCGGAGTAGCTG...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGCCAAATCACCTATATTaGGCTCTGGAAAGAATTTTG +
Preference number: 3 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQPNHLY*ALERIL
Trigger: CAAAATTCTTTCCAGAGCCAAATATAGGTGATTTGG...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 72 bp TGGGTGTCCCTTTCATTGTGGGAATCTATAGTGCTGTaGATTAAGGGAATTCAATCACCAGAGAAGGAGCTA +
Preference number: 3 (lower is better)
Translates to: WVSLSLWESIVL*IKGIQSPEKEL
Trigger: TAGCTCCTTCTCTGGTGATTGAATTCCCTTAATGCACAGCACTATAGATTCCCACAATGAAAGGGACACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CCA 72 bp CCTGGCTGTGCAGTTATTTCCTGCAGTTCTTTATGTTaGCTAAGGAGTCCCATAAATTACAGAACTGTCCTG +
Preference number: 3 (lower is better)
Translates to: PGCAVISCSSLC*LRSPINYRTVL
Trigger: CAGGACAGTTCTGTAATTTATGGGACTCCTTAGCCAACATAAAGAACTGCAGGAAATAACTGCACAGCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR CCA 72 bp TTCCCTCAGTGTGTCATGTCAGAAGATGACAACTTTTaGGTCAACCATAACAGTCCTGTCAACTGTGGAGAA +
Preference number: 3 (lower is better)
Translates to: FPQCVMSEDDNF*VNHNSPVNCGE
Trigger: TTCTCCACAGTTGACAGGACTGTTATGGTTGACCCAAAAGTTGTCATCTTCTGACATGACACACTGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGATCACTTGGATTGCTaGAGCCCAGGAGTTAGAGGC +
Preference number: 3 (lower is better)
Translates to: ISRYFNIHCSILLISLGRDHLDC*SPGVRG
Trigger: GCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGATC...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTACAGCTACTCCGAAGGTaGAGGTGGGAGGATCACTTG +
Preference number: 3 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVQLLRR*RWEDHL
Trigger: CAAGTGATCCTCCCACCTCAACCTTCGGAGTAGCTG...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATCAACTTTATTCTTCCTaGAACTTCCCGGGCCCTTTC +
Preference number: 3 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDQLYSS*NFPGPF
Trigger: GAAAGGGCCCGGGAAGTTCAAGGAAGAATAAAGTTG...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGTCTTCAGCTGGGCATTaGTGGCCAGTAAAGTCTGGG +
Preference number: 3 (lower is better)
Translates to: ISRYFNIHCSILLISLGRSSAGH*WPVKSG
Trigger: CCCAGACTTTACTGGCCACAAATGCCCAGCTGAAGA...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR TCA 72 bp GTAATCTCCCCAAACAGGAAAGAACCCATATGTTGGTaGATAAACCGCAGTACATCCATACAATGGACTACT +
Preference number: 3 (lower is better)
Translates to: VISPNRKEPICW*INRSTSIQWTT
Trigger: AGTAGTCCATTGTATGGATGTACTGCGGTTTATTCACCAACATATGGGTTCTTTCCTGTTTGGGGAGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 72 bp GTGAAGGGTGAACACTCGATCTTTTATCTGTTTATATaGAGGTTTCTCTACCCCAAGGTATCTCACCAGTTT +
Preference number: 3 (lower is better)
Translates to: VKGEHSIFYLFI*RFLYPKVSHQF
Trigger: AAACTGGTGAGATACCTTGGGGTAGAGAAACCTGCATATAAACAGATAAAAGATCGAGTGTTCACCCTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 72 bp TCAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTaGTCAAGCTCACCCTTGTATAATCGTAACAAGAGT +
Preference number: 3 (lower is better)
Translates to: SKLRFFHQRQHL*SSSPLYNRNKS
Trigger: ACTCTTGTTACGATTATACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR-3UTR CAA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTATGGAGTTTTAGAAATTaGCTTACCAAGTACCTGAGT +
Preference number: 3 (lower is better)
Translates to: INYRTVLCFSTENPNRPLWSFRN*LTKYLS
Trigger: ACTCAGGTACTTGGTAAGCAAATTTCTAAAACTCCA...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR GCA 72 bp CTCAAACCAGCCCTAAAGACTAATATTAGTACCTTCTaGTTACGCATGTTGAAAACAAGGCTAAGAAGTGAT +
Preference number: 3 (lower is better)
Translates to: LKPALKTNISTF*LRMLKTRLRSD
Trigger: ATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATTAGTCTTTAGGGCTGGTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR TCA 72 bp GTCCAGGGAATGAGCAATAAGATACAAATGAACGGTTaGCACCATACCATAAAGATTAGGAATAAGCATATC +
Preference number: 3 (lower is better)
Translates to: VQGMSNKIQMNG*HHTIKIRNKHI
Trigger: GATATGCTTATTCCTAATCTTTATGGTATGGTGTCAACCGTTCATTTGTATCTTATTGCTCATTCCCTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGTGGAGTTTTAGAAATTaGCTTACCAAGTACCTGAGT +
Preference number: 3 (lower is better)
Translates to: ISRYFNIHCSILLISLGRWSFRN*LTKYLS
Trigger: ACTCAGGTACTTGGTAAGCAAATTTCTAAAACTCCA...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR-3UTR CAA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTAGCTCTGGAAAGAATTTaGACACAGCACTTAAATATG +
Preference number: 3 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVALERI*TQHLNM
Trigger: CATATTTAAGTGCTGTGTCAAAATTCTTTCCAGAGC...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR GCA 72 bp CTCTTTATCATGTTCCCCCTAATAACTGTTCATTACTaGTTCAGTTCATTTTGTTTACACTTGTCACATACA +
Preference number: 3 (lower is better)
Translates to: LFIMFPLITVHY*FSSFCLHLSHT
Trigger: TGTATGTGACAAGTGTAAACAAAATGAACTGAAGCAGTAATGAACAGTTATTAGGGGGAACATGATAAAGAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGGGCAGAGGCTGCGGTaGTGCCCTCGCGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQGQRLR*CPREPW
Trigger: CCAGGGCTCGCGAGGGCAGCACCGCAGCCTCTGCCC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGCTGGGTGGCCGGGGCTaGGGCAGAGGCTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQLGGRG*GRGCGA
Trigger: AGCACCGCAGCCTCTGCCCCAGCCCCGGCCACCCAG...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGCCCCGCCTTGCTCCTaGACCGGCCTCGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQAPPCS*TGLEAF
Trigger: GAAGGCCTCGAGGCCGGTGCAGGAGCAAGGCGGGGC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGCCTTGGCCCCGCCTTaGTCCTGCACCGGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQALAPP*SCTGLE
Trigger: CTCGAGGCCGGTGCAGGAGCAAGGCGGGGCCAAGGC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGGGCAGAGGCTGCGGTaGTGCCCTCGCGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEGQRLR*CPREPW
Trigger: CCAGGGCTCGCGAGGGCAGCACCGCAGCCTCTGCCC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGGCTGGGGCAGAGGCTaGGGTGCTGCCCTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEGWGRG*GAALAS
Trigger: GCTCGCGAGGGCAGCACCGCAGCCTCTGCCCCAGCC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGGCAGGGGAGACATCTaGCCCAGTGCGGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQGRGDI*PSAAGC
Trigger: GCAGCCCGCCGCACTGGGGCAGATGTCTCCCCTGCC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGTCGGGCTCCCAGCCATaGGGGGCGCTCAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQSGSQP*GALKPW
Trigger: CCAAGGCTTGAGCGCCCCCCATGGCTGGGAGCCCGA...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGCGATCGATCCCTGGGTaGCCGGGGCTGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAERSIPG*PGLGQR
Trigger: CCTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCG...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGGGCAGAGGCTGCGGTaGTGCCCTCGCGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVGQRLR*CPREPW
Trigger: CCAGGGCTCGCGAGGGCAGCACCGCAGCCTCTGCCC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGCAGCACTCGCAGTCCTaGCTCCAGTGGTACCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQQHSQS*LQWYPA
Trigger: GGCTGGGTACCACTGGAGCCAGGACTGCGAGTGCTG...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp CGCGGGCCGTTCCCCGCGAAGGAGTCTCGGCGCGCCAGGGTCTCCTCCTGCACCCTCCGAAGGTTGAGGTaGGAGGATCACTTGGATTGC +
Preference number: 4 (lower is better)
Translates to: RGPFPAKESRRARVSSCTLRRLR*EDHLDC
Trigger: GCAATCCAAGTGATCCTCCCACCTCAACCTTCGGAG...GGTGCAGGAGGAGACCCTGGCGCGCCGAGACTCCTTCGCGGGGAACGGCCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616710.4
CDS-3UTR TCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGGCTCGACACCACCATaGGAGCATGCCCAGCTAGGT +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQGSTPP*EHAQLG
Trigger: ACCTAGCTGGGCATGCTCTCATGGTGGTGTCGAGCC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp CGCGGGCCGTTCCCCGCGAAGGAGTCTCGGCGCGCCAGGGTCTCCTCCTGCACCGCCACAAATTACTGCTaGGAGTTTGAGGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RGPFPAKESRRARVSSCTATNYC*EFEEWQ
Trigger: CTGCCACTCCTCAAACTCGCAGCAGTAATTTGTGGC...GGTGCAGGAGGAGACCCTGGCGCGCCGAGACTCCTTCGCGGGGAACGGCCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616710.4
CDS-3UTR GCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGCCTGTGCAGACATCTaGCCAGTTGGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEACADI*PVGAGA
Trigger: AGCCCCAGCCCCAACTGGGCAGATGTCTGCACAGGC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGCACTGCACTCTAGCCTaGGCCAGAGCCAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQHCTLA*ARARLP
Trigger: TGGCAACCTGGCTCTGGCCCAGGCTAGAGTGCAGTG...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
3UTR CAA 72 bp TGTTGGTCCAGGGCGGCTCCCCCTGCACCACTTGGCTaGGCTTCAGTGATCCCACCTAGACCCCGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: CWSRAAPPAPLG*ASVIPPRPRLC
Trigger: GCACAGGCGGGGTCTAGGTGGGATCACTGAAGCCAAGCCAAGTGGTGCAGGGGGAGCCGCCCTGGACCAACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp CGCGGGCCGTTCCCCGCGAAGGAGTCTCGGCGCGCCAGGGTCTCCTCCTGCACCAGTGATCCACAGTCATaGTCTTCAGCTGGGCATTTG +
Preference number: 4 (lower is better)
Translates to: RGPFPAKESRRARVSSCTSDPQS*SSAGHL
Trigger: CAAATGCCCAGCTGAAGAGCATGACTGTGGATCACT...GGTGCAGGAGGAGACCCTGGCGCGCCGAGACTCCTTCGCGGGGAACGGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616710.4
CDS-3UTR TCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGCGTGGCCTGCAGCTGTaGTCCCAGCTACTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVRGLQL*SQLLRR
Trigger: CCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACG...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGGGGCTCAGTGCAGTTaGAGCTTTCTGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQGAQCS*SFLNPL
Trigger: CAGTGGGTTCAGAAAGCTGCAACTGCACTGAGCCCC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGAGTCCAATCAGTCCTaGACAGGGGCTCAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQESNQS*TGAQCS
Trigger: ACTGCACTGAGCCCCTGTGCAGGACTGATTGGACTC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGCAGAGAATGCCGGGTaGTCTTCCTCGACTGTACCG +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEAENAG*SSSTVP
Trigger: CGGTACAGTCGAGGAAGACCACCCGGCATTCTCTGC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGTAATCCCAGTACTTTaGGAGGCCGAGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQVIPVL*EAEAGG
Trigger: TCCTCCAGCCTCGGCCTCCCAAAGTACTGGGATTAC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGCCCAGAAGCCTCCTCTaGCGCTTGGAGCAGAGCATT +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEPRSLL*RLEQSI
Trigger: AATGCTCTGCTCCAAGCGCCAGAGGAGGCTTCTGGG...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGCCTAGTTGCAAAGAGTaGGAAGGTGTCCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQPSCKE*EGVPGG
Trigger: CCCACCTGGGACACCTTCCCACTCTTTGCAACTAGG...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp CGCGGGCCGTTCCCCGCGAAGGAGTCTCGGCGCGCCAGGGTCTCCTCCTGCACCCATCAATTCACTTCCTaGAAAGCCCATTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: RGPFPAKESRRARVSSCTHQFTS*KAHFLE
Trigger: TTCCAGGAAATGGGCTTTTCAGGAAGTGAATTGATG...GGTGCAGGAGGAGACCCTGGCGCGCCGAGACTCCTTCGCGGGGAACGGCCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616710.4
CDS-3UTR TCA 90 bp CGCGGGCCGTTCCCCGCGAAGGAGTCTCGGCGCGCCAGGGTCTCCTCCTGCACCCAGCTGAGTAAAATGTaGGTAGGAAACATGATACTC +
Preference number: 4 (lower is better)
Translates to: RGPFPAKESRRARVSSCTQLSKM*VGNMIL
Trigger: GAGTATCATGTTTCCTACTCACATTTTACTCAGCTG...GGTGCAGGAGGAGACCCTGGCGCGCCGAGACTCCTTCGCGGGGAACGGCCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616710.4
CDS-3UTR GCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGTTGAAGTTCATCACCTaGCCGCTGGAGATGAACGTG +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQLKFIT*PLEMNV
Trigger: CACGTTCATCTCCAGCGGGCAGGTGATGAACTTCAA...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGCCCCGCCTTGCTCCTaGACCGGCCTCGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVAPPCS*TGLEAF
Trigger: GAAGGCCTCGAGGCCGGTGCAGGAGCAAGGCGGGGC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGGGCAGGGGAGACATCTaGCCCAGTGCGGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKGRGDI*PSAAGC
Trigger: GCAGCCCGCCGCACTGGGGCAGATGTCTCCCCTGCC...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGGCAGGGGAGACATCTaGCCCAGTGCGGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVGRGDI*PSAAGC
Trigger: GCAGCCCGCCGCACTGGGGCAGATGTCTCCCCTGCC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGGGTTATGCAACTTGTaGCCAGCGCAGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVGLCNL*PAQPTA
Trigger: TGCTGTGGGCTGCGCTGGGCACAAGTTGCATAACCC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGCTGGGTGGCCGGGGCTaGGGCAGAGGCTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQLGGRG*GRGCGA
Trigger: AGCACCGCAGCCTCTGCCCCAGCCCCGGCCACCCAG...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGTCCCCGTGAAGCACTaGCTTAAACTGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQVPVKH*LKLSFS
Trigger: GGAGAATGACAGTTTAAGCCAGTGCTTCACGGGGAC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGCCTCAAGAAGCCTaGCAGGTTTCTGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQRPQEA*QVSACS
Trigger: AGAACAAGCAGAAACCTGCCAGGCTTCTTGAGGCCT...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGCCTCCTCTGGCGCTTaGAGCAGAGCATTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVASSGA*SRALSR
Trigger: ACGAGACAATGCTCTGCTCCAAGCGCCAGAGGAGGC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGACAGCCTTTGTTTCCTaGGCTACCCCTGCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVTAFVS*ATPARE
Trigger: CTCACGGGCAGGGGTAGCCCAGGAAACAAAGGCTGT...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTAGTGCGGCGGGCTGCTaGGCATCCGTGGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVISAAGC*ASVGMG
Trigger: CCCCATGCCCACGGATGCTCAGCAGCCCGCCGCACT...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGGAGGGAAAAACCAGTaGTCCACAGTCATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEGGKNQ*STVMLF
Trigger: GAAGAGCATGACTGTGGATCACTGGTTTTTCCCTCC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGCGCGCACTCGGTGTTaGGGCGGCAGCACTCGCAGT +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVARTRC*GGSTRS
Trigger: ACTGCGAGTGCTGCCGCCGCAACACCGAGTGCGCGC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGTTGAGCTGCAACGGGTaGTGGGCGCCCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQLSCNG*WAPRPG
Trigger: GCCGGGCCTGGGCGCCCAGCACCCGTTGCAGCTCAA...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGATCAGAGAAGTAGCCTaGAAGGCAAGGTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQIREVA*KARFAH
Trigger: GTGTGCAAACCTTGCCTTGCAGGCTACTTCTCTGAT...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGGCCTTGGCCCCGCCTTaGTCCTGCACCGGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQALAPP*SCTGLE
Trigger: CTCGAGGCCGGTGCAGGAGCAAGGCGGGGCCAAGGC...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGGCTGGGGCAGAGGCTaGGGTGCTGCCCTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAGWGRG*GAALAS
Trigger: GCTCGCGAGGGCAGCACCGCAGCCTCTGCCCCAGCC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAAGGCTGGGGCAGAGGCTaGGGTGCTGCCCTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKGWGRG*GAALAS
Trigger: GCTCGCGAGGGCAGCACCGCAGCCTCTGCCCCAGCC...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGCCACAAATTACTGCTaGGAGTTTGAGGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEATNYC*EFEEWQ
Trigger: CTGCCACTCCTCAAACTCGCAGCAGTAATTTGTGGC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGAGGATCACTTGGATTaGTTGAGCCCAGGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQEDHLD*LSPGVR
Trigger: TCTAACTCCTGGGCTCAAGCAATCCAAGTGATCCTC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGTTTGCGGGGAACCAGTaGTCACTGGGTAACAAAAGA +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQFAGNQ*SLGNKR
Trigger: TCTTTTGTTACCCAGTGAGCACTGGTTCCCCGCAAA...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAAGGGGCTGGGGCTGGCTaGCCAGTGCGGGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKGAGAG*PVRAMA
Trigger: GGCCATTGCCCGCACTGGGCAGCCAGCCCCAGCCCC...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGTCTGCATTTGTCCGTaGAGGAAAAGGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQVCICP*RKRHQR
Trigger: TCTCTGATGCCTTTTCCTCCACGGACAAATGCAGAC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGTACCGATCGATCCCTaGGTGGCCGGGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVVPIDP*VAGAGA
Trigger: TGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTAC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGTAACCTTGAACTCCTaGACTCAAGCATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEVTLNS*TQASSC
Trigger: GCAGGAGGATGCTTGAGTCCAGGAGTTCAAGGTTAC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTTGTGCCCAGCGCAGCCCAGCCATGGGGGTGTTaGTCCAGGGCGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: MLCLLFQKRVMQLVPSAAQPWGC*SRAAPP
Trigger: AGGGGGAGCCGCCCTGGACCAACACCCCCATGGCTG...GGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGTTCTCACAAGCGGGATaGTGCCAAGAGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVFSQAG*CQEKGT
Trigger: GGTGCCTTTCTCTTGGCATCATCCCGCTTGTGAGAA...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTGCGCGCACTCGGTGTTaGGGCGGCAGCACTCGCAGT +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIARTRC*GGSTRS
Trigger: ACTGCGAGTGCTGCCGCCGCAACACCGAGTGCGCGC...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCTTGAGCTGCAACGGGTaGTGGGCGCCCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCLSCNG*WAPRPG
Trigger: GCCGGGCCTGGGCGCCCAGCACCCGTTGCAGCTCAA...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGTTTGCGGGGAACCAGTaGTCACTGGGTAACAAAAGA +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEFAGNQ*SLGNKR
Trigger: TCTTTTGTTACCCAGTGAGCACTGGTTCCCCGCAAA...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGAGTGATCCACAGTCATaGTCTTCAGCTGGGCATTTG +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAESDPQS*SSAGHL
Trigger: CAAATGCCCAGCTGAAGAGCATGACTGTGGATCACT...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGCATAATGCTTCTCACTaGTACATGGAGGAGCGATCT +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQHNASH*YMEERS
Trigger: AGATCGCTCCTCCATGTACCAGTGAGAAGCATTATG...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTTCGGGCTCCCAGCCATaGGGGGCGCTCAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFSGSQP*GALKPW
Trigger: CCAAGGCTTGAGCGCCCCCCATGGCTGGGAGCCCGA...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTGTACCGATCGATCCCTaGGTGGCCGGGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFVPIDP*VAGAGA
Trigger: TGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTAC...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGAGAAACCAAGAGCCTaGGTGAGAGCAAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEEKPRA*VRAKAF
Trigger: GAAAGCTTTTGCTCTCACCCAGGCTCTTGGTTTCTC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGCATCAATTCACTTCCTaGAAAGCCCATTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQHQFTS*KAHFLE
Trigger: TTCCAGGAAATGGGCTTTTCAGGAAGTGAATTGATG...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGAGTGCGGCGGGCTGCTaGGCATCCGTGGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKSAAGC*ASVGMG
Trigger: CCCCATGCCCACGGATGCTCAGCAGCCCGCCGCACT...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGTAAAGTCTGGGCAGTaGCTACTATTAGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQVKSGQ*LLLVLS
Trigger: AGAAAGCACTAATAGTAGTCACTGCCCAGACTTTAC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGACACAACTGTCACCTaGGGACTCCTTATCTCCACT +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVDTTVT*GLLIST
Trigger: AGTGGAGATAAGGAGTCCTCAGGTGACAGTTGTGTC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGGTGGTTTGTTACACTaGAATAATCCCATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQGGLLH*NNPIFP
Trigger: GGGGAAAATGGGATTATTTCAGTGTAACAAACCACC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGAGTGTTTAGGGCTTTaGATGCTTTGTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEECLGL*MLCLLF
Trigger: GAAGAGGAGACAAAGCATTCAAAGCCCTAAACACTC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGGATCCTCCTGGCTGTaGAGTTATTTCCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVGSSWL*SYFLQF
Trigger: GAACTGCAGGAAATAACTGCACAGCCAGGAGGATCC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGTGCCTGCAAAACGTCTaGATTTTCTATCACACAGGG +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAECLQNV*IFYHTG
Trigger: CCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCA...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTCAGTCCTGGCTCCAGTaGTACCCAGCCGTGCACGCG +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFQSWLQ*YPAVHA
Trigger: CGCGTGCACGGCTGGGTACCACTGGAGCCAGGACTG...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTCAGCACTCGCAGTCCTaGCTCCAGTGGTACCCAGCC +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVQHSQS*LQWYPA
Trigger: GGCTGGGTACCACTGGAGCCAGGACTGCGAGTGCTG...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGGGGCGCTCAAGCCTTaGCCCCGCCTTGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAGALKP*PRLAPA
Trigger: TGCAGGAGCAAGGCGGGGCCAAGGCTTGAGCGCCCC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGATGGGGTTCATTTGGTaGTTTTCTAGCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEMGFIW*FSSWQR
Trigger: TCTCTGCCAGCTAGAAAACCACCAAATGAACCCCAT...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGCCAGATGCAGGGGACTaGCCACCAGGGGAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRPDAGD*PPGELP
Trigger: TGGAAGCTCCCCTGGTGGCCAGTCCCCTGCATCTGG...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGCAGTGGGGCAGCCATaGGGGTGTTGGTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAAVGQP*GCWSRA
Trigger: CGCCCTGGACCAACACCCCCATGGCTGCCCCACTGC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGAAGTGCTCAGTGAGATaGCAGTCACAGCAGAAACTC +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVKCSVR*QSQQKL
Trigger: GAGTTTCTGCTGTGACTGTCATCTCACTGAGCACTT...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGATCAGAGAAGTAGCCTaGAAGGCAAGGTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVIREVA*KARFAH
Trigger: GTGTGCAAACCTTGCCTTGCAGGCTACTTCTCTGAT...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTAGACATCTGCCCCAGTaGGGCGGGCTGCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFRHLPQ*GGLLSI
Trigger: GATGCTCAGCAGCCCGCCGCACTGGGGCAGATGTCT...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTAGACATCTGCCCCAGTaGGGCGGGCTGCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIRHLPQ*GGLLSI
Trigger: GATGCTCAGCAGCCCGCCGCACTGGGGCAGATGTCT...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTAAGCTGGGCGTGGCCTaGAGCTGTGATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVKLGVA*SCDPSY
Trigger: GTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTT...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAACCTAGACCCCGCCTGTaGTCACTGCTGGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKPRPRL*SLLAPP
Trigger: TGGCGGTGCCAGCAGTGAGCACAGGCGGGGTCTAGG...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGCAGGGCGGCTCCCCCTaGACCACTTGGCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQQGGSP*TTWLGF
Trigger: GAAGCCAAGCCAAGTGGTGCAGGGGGAGCCGCCCTG...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCAGCACTCGCAGTCCTaGCTCCAGTGGTACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFQHSQS*LQWYPA
Trigger: GGCTGGGTACCACTGGAGCCAGGACTGCGAGTGCTG...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTTGTGCCCAGCGCAGCCGCTGCTGAGCATCCGTaGGCATGGGGACAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: MLCLLFQKRVMQLVPSAAAAEHP*AWGQSS
Trigger: TGAGGACTGTCCCCATGCCCACGGATGCTCAGCAGC...GGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTGGAGGAAGCTGGGCGTaGCCTGCAGCTGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFGGSWA*PAAVIP
Trigger: TGGGATCACAGCTGCAGGCCACGCCCAGCTTCCTCC...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTTGTGCCCAGCGCAGCCGAGCAGCAAGTCTTGTaGGTGTGCCTGCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: MLCLLFQKRVMQLVPSAAEQQVL*VCLPTG
Trigger: CCCAGTGGGCAGGCACACCCACAAGACTTGCTGCTC...GGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGTCAGATCTCTACTACTaGAATCTTCTAGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAESDLYY*NLLGTA
Trigger: GGCAGTTCCTAGAAGATTCCAGTAGTAGAGATCTGA...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCATGGAGGAGCGATCTaGAAAGCCACCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFHGGAI*KATCSR
Trigger: CCGGCTGCAGGTGGCTTTGCAGATCGCTCCTCCATG...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGACATCTGCCCCAGTaGGGCGGGCTGCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCRHLPQ*GGLLSI
Trigger: GATGCTCAGCAGCCCGCCGCACTGGGGCAGATGTCT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTGGTTCCGGCAGCCTGTaGAGACATCTGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFGSGSL*RHLPSW
Trigger: CCAACTGGGCAGATGTCTGCACAGGCTGCCGGAACC...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCTGGCCTCCGTCCTaGTGGCTTCTTCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFLWPPS*WLLLQG
Trigger: CCCCTGAAGAAGAAGCCAGCAGGACGGAGGCCAGAG...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAAAGCTGTGCAGAGCCATaGGGGTGGGTCAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKSCAEP*GWVRRS
Trigger: GCTCCTCCTGACCCACCCGCATGGCTCTGCACAGCT...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGGCAGAGAATGCCGGGTaGTCTTCCTCGACTGTACCG +
Preference number: 4 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRAENAG*SSSTVP
Trigger: CGGTACAGTCGAGGAAGACCACCCGGCATTCTCTGC...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGGGAGGAAGCTGGGCGTaGCCTGCAGCTGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQGGSWA*PAAVIP
Trigger: TGGGATCACAGCTGCAGGCCACGCCCAGCTTCCTCC...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGGAGGAAGCTGGGCGTaGCCTGCAGCTGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAGGSWA*PAAVIP
Trigger: TGGGATCACAGCTGCAGGCCACGCCCAGCTTCCTCC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGACAGTAACTGGTCTGTaGGCTGGGAGGGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRTVTGL*AGRACP
Trigger: TGGACAGGCCCTCCCAGCCCACAGACCAGTTACTGT...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGGCCCAGTGCGGGCAATaGCCACTGTCCACCTCTTTT +
Preference number: 4 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRAQCGQ*PLSTSF
Trigger: AAAAGAGGTGGACAGTGGCCATTGCCCGCACTGGGC...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTTGTGCCCAGCGCAGCCTGGCCTCCGTCCTGCTaGCTTCTTCTTCAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: MLCLLFQKRVMQLVPSAAWPPSC*LLLQGE
Trigger: TTCCCCCTGAAGAAGAAGCCAGCAGGACGGAGGCCA...GGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGAGGATGGGAGACAGGTaGAGAGCACACAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQRMGDR*RAHSLA
Trigger: GGCCAGGCTGTGTGCTCTCCACCTGTCTCCCATCCT...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGATTTCTCTGTCCCATaGTGTTCTACTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVDFSVP*CSTLFP
Trigger: TGGAAAGAGAGTAGAACATCATGGGACAGAGAAATC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp ATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTTGTGCCCAGCGCAGCCCCTGCCCGCTGGAGATaGACGTGGAGTTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: MLCLLFQKRVMQLVPSAAPARWR*TWSYCF
Trigger: GAAACAGTAACTCCACGTTCATCTCCAGCGGGCAGG...GGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGCATCAATTCACTTCCTaGAAAGCCCATTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVHQFTS*KAHFLE
Trigger: TTCCAGGAAATGGGCTTTTCAGGAAGTGAATTGATG...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTTTACTGCTGCGAGTTTaGGGAGTGGCAGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVLLLRV*GVAGET
Trigger: TGTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAA...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCACATGGAGGAGCGATCTaGAAAGCCACCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAHGGAI*KATCSR
Trigger: CCGGCTGCAGGTGGCTTTGCAGATCGCTCCTCCATG...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCCTGAGTAGCCAGGACTaGAGGTGCACACCACCGTGC +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCLSSQD*RCTPPC
Trigger: GCACGGTGGTGTGCACCTGCAGTCCTGGCTACTCAG...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp ATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTTGTGCCCAGCGCAGCCTTGTCTCGTCTTCTCTaGTCCGAACCCTCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: MLCLLFQKRVMQLVPSAALSRLL*SEPSSA
Trigger: AGCGCTGGAGGGTTCGGAGCAGAGAAGACGAGACAA...GGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTTGCTGGCACCGCCACTaGCCAGTGTCAGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCCWHRH*PVSGPS
Trigger: GGAGGGACCTGACACTGGGCAGTGGCGGTGCCAGCA...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGCACATTTCCATTTGGTaGTTTTCTAGCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVHISIW*FSSWQR
Trigger: TCTCTGCCAGCTAGAAAACCACCAAATGGAAATGTG...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269485.11
CDS-3UTR CCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTGCGAGTTTGAGGAGTaGCAGGGGAGACATCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVICEFEE*QGRHLP
Trigger: GGGCAGATGTCTCCCCTGCCACTCCTCAAACTCGCA...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGGAACCAGTGCTCACTaGGTAACAAAAGATAAAACC +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVGTSAH*VTKDKT
Trigger: GGTTTTATCTTTTGTTACCCAGTGAGCACTGGTTCC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTGTGAGGAACAGTAACTaGTCTGTGGGCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFVRNSN*SVGWEG
Trigger: GCCCTCCCAGCCCACAGACCAGTTACTGTTCCTCAC...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCCCATCCCTTGGATCTaGGCTGCCTTTGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFPIPWI*AAFVTC
Trigger: GCAGGTCACAAAGGCAGCCCAGATCCAAGGGATGGG...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGTTGGTTATAGTTACGTaGTCCGACATGATGACTGAG +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVLVIVT*SDMMTE
Trigger: CTCAGTCATCATGTCGGACCACGTAACTATAACCAA...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTCAGTCCTGTCAACTGTaGAGAAGGTGCGTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFQSCQL*RRCVPP
Trigger: CGGAGGGACGCACCTTCTCCACAGTTGACAGGACTG...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTCCTCCTGAAGGGGCCTaGACCTATAATGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIPPEGA*TYNATS
Trigger: GGAGGTGGCATTATAGGTCCAGGCCCCTTCAGGAGG...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CAA 72 bp TGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTaGTGCCCAGCGCAGCCCACAGCAATGCACCAGACT +
Preference number: 4 (lower is better)
Translates to: CFVSSSKSGLCN*CPAQPTAMHQT
Trigger: AGTCTGGTGCATTGCTGTGGGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAACACTGTGTCCTTGTTaGGCTGCAACGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPATLCPC*AATGAG
Trigger: CCCAGCACCCGTTGCAGCTCAACAAGGACACAGTGT...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGACACTGTGTCCTTGTTaGGCTGCAACGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQTLCPC*AATGAG
Trigger: CCCAGCACCCGTTGCAGCTCAACAAGGACACAGTGT...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCACACTGTGTCCTTGTTaGGCTGCAACGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCTLCPC*AATGAG
Trigger: CCCAGCACCCGTTGCAGCTCAACAAGGACACAGTGT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAAGTGCGGCGGGCTGCTaGGCATCCGTGGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLSAAGC*ASVGMG
Trigger: CCCCATGCCCACGGATGCTCAGCAGCCCGCCGCACT...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGTTACTGCTGCGAGTTTaGGGAGTGGCAGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQLLLRV*GVAGET
Trigger: TGTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAA...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACCGTGGCCTGCAGCTGTaGTCCCAGCTACTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNRGLQL*SQLLRR
Trigger: CCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACG...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTTGCTTACCAAGTACCTaGGTGCCTCTGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFCLPST*VPLPAW
Trigger: CCATGCTGGCAGAGGCACTCAGGTACTTGGTAAGCA...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTTGCTTACCAAGTACCTaGGTGCCTCTGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFCLPST*VPLPAW
Trigger: CCATGCTGGCAGAGGCACTCAGGTACTTGGTAAGCA...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGTGCTTACCAAGTACCTaGGTGCCTCTGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQCLPST*VPLPAW
Trigger: CCATGCTGGCAGAGGCACTCAGGTACTTGGTAAGCA...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGCAAACGCCAAAGATaGTGGCAGCCACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCSKRQR*WQPPGP
Trigger: TGGCCCTGGTGGCTGCCATCATCTTTGGCGTTTGCT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAAGCAAACGCCAAAGATaGTGGCAGCCACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPASKRQR*WQPPGP
Trigger: TGGCCCTGGTGGCTGCCATCATCTTTGGCGTTTGCT...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTATTGAGCTGCAACGGGTaGTGGGCGCCCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLLSCNG*WAPRPG
Trigger: GCCGGGCCTGGGCGCCCAGCACCCGTTGCAGCTCAA...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGCCCCGCCTTGCTCCTaGACCGGCCTCGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYAPPCS*TGLEAF
Trigger: GAAGGCCTCGAGGCCGGTGCAGGAGCAAGGCGGGGC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTAAAGTGGGCAGAGAATaGCGGGTGGTCTTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFKVGRE*RVVFLD
Trigger: GTCGAGGAAGACCACCCGGCATTCTCTGCCCACTTT...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTAAAGTGGGCAGAGAATaGCGGGTGGTCTTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFKVGRE*RVVFLD
Trigger: GTCGAGGAAGACCACCCGGCATTCTCTGCCCACTTT...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGCACCTCCTACACATGTaGCCTGACAGACACCACCTT +
Preference number: 4 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKHLLHM*PDRHHL
Trigger: AAGGTGGTGTCTGTCAGGGCACATGTGTAGGAGGTG...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCGCAGCCCACAGCAATaGACCAGACTCACATGCCAT +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFRSPQQ*TRLTCH
Trigger: ATGGCATGTGAGTCTGGTGCATTGCTGTGGGCTGCG...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTACGATCGATCCCTGGGTaGCCGGGGCTGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLRSIPG*PGLGQR
Trigger: CCTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCG...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTAACTGGTCTGTGGGCTaGGAGGGCCTGTCCATGTAT +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFNWSVG*EGLSMY
Trigger: ATACATGGACAGGCCCTCCCAGCCCACAGACCAGTT...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTTTCTCACAAGCGGGATaGTGCCAAGAGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFFSQAG*CQEKGT
Trigger: GGTGCCTTTCTCTTGGCATCATCCCGCTTGTGAGAA...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTTCTCACAAGCGGGATaGTGCCAAGAGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIFSQAG*CQEKGT
Trigger: GGTGCCTTTCTCTTGGCATCATCCCGCTTGTGAGAA...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTTTGCCGTGTGTGTACTaGCACAACTGTCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFLPCVY*HNCHLR
Trigger: CCTCAGGTGACAGTTGTGTCAGTACACACACGGCAA...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGTCACATGCTCCCTGCTaGCCAAAGTTTGCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQSHAPC*PKFAVC
Trigger: ACACACGGCAAACTTTGGTCAGCAGGGAGCATGTGA...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTGGTCTTGCTGACCAATaGGAGCATCCTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIGLADQ*EHPGIF
Trigger: GAAGATGCCAGGATGCTCTCATTGGTCAGCAAGACC...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAGGCTGGGGCAGAGGCTaGGGTGCTGCCCTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTGWGRG*GAALAS
Trigger: GCTCGCGAGGGCAGCACCGCAGCCTCTGCCCCAGCC...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACAAGCTGGGCGTGGCCTaGAGCTGTGATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNKLGVA*SCDPSY
Trigger: GTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTT...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGTGTGCAGTTATTTCCTaGAGTTCTTTATGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVCAVIS*SSLCWL
Trigger: TAGCCAACATAAAGAACTGCAGGAAATAACTGCACA...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGGGAACTGCCAGTGAGTaGTTGGTTGTCTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKGTASE*LVVSHL
Trigger: GAGATGAGAGACAACCAAGCACTCACTGGCAGTTCC...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTTCCCTCCGACCTAGTTaGAAAGAGTGGGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFSLRPS*KEWEGV
Trigger: GACACCTTCCCACTCTTTGCAACTAGGTCGGAGGGA...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGAGACATGTACTTTCCTaGTTCACATTTGTTACAGCA +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVRHVLS*FTFVTA
Trigger: TGCTGTAACAAATGTGAACCAGGAAAGTACATGTCT...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAGGGGCGCTCAAGCCTTaGCCCCGCCTTGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLGALKP*PRLAPA
Trigger: TGCAGGAGCAAGGCGGGGCCAAGGCTTGAGCGCCCC...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTCTGGGTGGCCGGGGCTaGGGCAGAGGCTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETLGGRG*GRGCGA
Trigger: AGCACCGCAGCCTCTGCCCCAGCCCCGGCCACCCAG...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACACTGGGTGGCCGGGGCTaGGGCAGAGGCTGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTLGGRG*GRGCGA
Trigger: AGCACCGCAGCCTCTGCCCCAGCCCCGGCCACCCAG...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCGTAATCCCAGTACTTTaGGAGGCCGAGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCVIPVL*EAEAGG
Trigger: TCCTCCAGCCTCGGCCTCCCAAAGTACTGGGATTAC...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGTGCAGTTCTTTATGTTaGCTAAGGAGTCCCATAAAT +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVCSSLC*LRSPIN
Trigger: ATTTATGGGACTCCTTAGCCAACATAAAGAACTGCA...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGCCGGGTCATTGTAAATaGGTAAGCAAACCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKPGHCK*VSKPGQ
Trigger: CTGGCCTGGTTTGCTTACCCATTTACAATGACCCGG...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGTCCCTCCTCTTCTCTaGCAAAGCTTTAGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVVPPLL*QSFSGC
Trigger: GCAACCACTAAAGCTTTGCCAGAGAAGAGGAGGGAC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAAGTGCGGCGGGCTGCTaGGCATCCGTGGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTSAAGC*ASVGMG
Trigger: CCCCATGCCCACGGATGCTCAGCAGCCCGCCGCACT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTATCACTTGGATTGCTTaGGCCCAGGAGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIITWIA*AQELEA
Trigger: AGCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGAT...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGTGCTTACCAAGTACCTaGGTGCCTCTGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKCLPST*VPLPAW
Trigger: CCATGCTGGCAGAGGCACTCAGGTACTTGGTAAGCA...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCTTCTCACAAGCGGGATaGTGCCAAGAGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCFSQAG*CQEKGT
Trigger: GGTGCCTTTCTCTTGGCATCATCCCGCTTGTGAGAA...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTGGAGGGAAAAACCAGTaGTCCACAGTCATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFGGKNQ*STVMLF
Trigger: GAAGAGCATGACTGTGGATCACTGGTTTTTCCCTCC...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGGGAGGGAAAAACCAGTaGTCCACAGTCATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQGGKNQ*STVMLF
Trigger: GAAGAGCATGACTGTGGATCACTGGTTTTTCCCTCC...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTAAGCGAAGTGCTCAGTaGGATGACAGTCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIKRSAQ*DDSHSR
Trigger: TCTGCTGTGACTGTCATCTCACTGAGCACTTCGCTT...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAATGCTTCCAGGCTCAGTaGGGAACAGTAACTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKCFQAQ*GTVTGL
Trigger: CAGACCAGTTACTGTTCCTCACTGAGCCTGGAAGCA...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCGGCCACCAGGGCCTTaGCTGTATCACAAACTTTAT +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFRPPGP*LYHKLY
Trigger: ATAAAGTTTGTGATACAGGCAAGGCCCTGGTGGCCG...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTCGGCCACCAGGGCCTTaGCTGTATCACAAACTTTAT +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFRPPGP*LYHKLY
Trigger: ATAAAGTTTGTGATACAGGCAAGGCCCTGGTGGCCG...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGTTGAGCTGCAACGGGTaGTGGGCGCCCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRLSCNG*WAPRPG
Trigger: GCCGGGCCTGGGCGCCCAGCACCCGTTGCAGCTCAA...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTCTGGCAGAGAAGAACTaGAAACCGCATCGGATTTCT +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVLAEKN*KPHRIS
Trigger: AGAAATCCGATGCGGTTTGCAGTTCTTCTCTGCCAG...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTTGAAGTTCATCACCTaGCCGCTGGAGATGAACGTG +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVILKFIT*PLEMNV
Trigger: CACGTTCATCTCCAGCGGGCAGGTGATGAACTTCAA...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGCCTTGGCCCCGCCTTaGTCCTGCACCGGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRALAPP*SCTGLE
Trigger: CTCGAGGCCGGTGCAGGAGCAAGGCGGGGCCAAGGC...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTGGATCCTCCTGGCTGTaGAGTTATTTCCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFGSSWL*SYFLQF
Trigger: GAACTGCAGGAAATAACTGCACAGCCAGGAGGATCC...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGCATCTGGCTATTCTTTaGGCCCTACATGTTGCCTAC +
Preference number: 4 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKHLAIL*ALHVAY
Trigger: GTAGGCAACATGTAGGGCGCAAAGAATAGCCAGATG...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGCGATCGATCCCTGGGTaGCCGGGGCTGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRRSIPG*PGLGQR
Trigger: CCTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCG...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCGAGCATCCGTGGGCATaGGGACAGTCCTCATCAATT +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCEHPWA*GQSSSI
Trigger: AATTGATGAGGACTGTCCCCATGCCCACGGATGCTC...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACTGCGAGTTTGAGGAGTaGCAGGGGAGACATCTGCCC +
Preference number: 4 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNCEFEE*QGRHLP
Trigger: GGGCAGATGTCTCCCCTGCCACTCCTCAAACTCGCA...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGTCATGCTCTTCAGCTaGGCATTTGTGGCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVVMLFS*AFVASK
Trigger: TTTACTGGCCACAAATGCCCAGCTGAAGAGCATGAC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACTGCTCCCCCATCCCTTaGATCTGGGCTGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNCSPIP*IWAAFV
Trigger: CACAAAGGCAGCCCAGATCCAAGGGATGGGGGAGCA...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTTCCCCCTGCACCACTTaGCTTGGCTTCAGTGATCCC +
Preference number: 4 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCSPCTT*LGFSDP
Trigger: GGGATCACTGAAGCCAAGCCAAGTGGTGCAGGGGGA...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTGTTTCAACCTCACCCTaGGGTCAGGATAACTGGGTA +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFVSTSP*GQDNWV
Trigger: TACCCAGTTATCCTGACCCCAGGGTGAGGTTGAAAC...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGGGAAATGGGAACTTTaGGATGTTGAAATATTCTAT +
Preference number: 4 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVGKWEL*DVEIFY
Trigger: ATAGAATATTTCAACATCCCAAAGTTCCCATTTCCC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATCACTTGGATTGCTTaGGCCCAGGAGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCITWIA*AQELEA
Trigger: AGCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGAT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTACGTGGCCTGCAGCTGTaGTCCCAGCTACTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLRGLQL*SQLLRR
Trigger: CCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACG...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATCTAGGAACTGCCAGTaGGTGCTTGGTTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPASRNCQ*VLGCLS
Trigger: TGAGAGACAACCAAGCACTCACTGGCAGTTCCTAGA...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAGGCTACCCCTGCCCGTaGGAAACCAAGAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLGYPCP*ETKSLG
Trigger: ACCCAGGCTCTTGGTTTCTCACGGGCAGGGGTAGCC...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTCTGGCAGAGAAGAACTaGAAACCGCATCGGATTTCT +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFLAEKN*KPHRIS
Trigger: AGAAATCCGATGCGGTTTGCAGTTCTTCTCTGCCAG...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTAGTGCCACAAATTACTaGTGCGAGTTTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVISATNY*CEFEEW
Trigger: CCACTCCTCAAACTCGCAGCAGTAATTTGTGGCACT...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTTTGCGGGGAACCAGTaGTCACTGGGTAACAAAAGA +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIFAGNQ*SLGNKR
Trigger: TCTTTTGTTACCCAGTGAGCACTGGTTCCCCGCAAA...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGCTGCTGACCAAAGTTTaGCGTGTGTGTACTGACACA +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQLLTKV*RVCTDT
Trigger: TGTGTCAGTACACACACGGCAAACTTTGGTCAGCAG...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGCAAAGACAGCACCTTTaGTCAAGCTCACCCTTGTAT +
Preference number: 4 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRQRQHL*SSSPLY
Trigger: ATACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTG...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTCAAAGCTTTAGTGGTTaGAAGACTTCACCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFQSFSG*KTSPAG
Trigger: CCCTGCTGGTGAAGTCTTGCAACCACTAAAGCTTTG...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTTGTGCCCAGCGCAGCCCATAATGCTTCTCACTaGTACATGGAGGAGCGATCT +
Preference number: 4 (lower is better)
Translates to: MLCLLFQKRVMQLVPSAAHNASH*YMEERS
Trigger: AGATCGCTCCTCCATGTACCAGTGAGAAGCATTATG...GGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTACAGCACTCGCAGTCCTaGCTCCAGTGGTACCCAGCC +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLQHSQS*LQWYPA
Trigger: GGCTGGGTACCACTGGAGCCAGGACTGCGAGTGCTG...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTTGGTGGTTTTCTAGCTaGCAGAGAAGAACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVWWFSS*QRRTAN
Trigger: GTTTGCAGTTCTTCTCTGCCAGCTAGAAAACCACCA...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGGGGCGCTCAAGCCTTaGCCCCGCCTTGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETGALKP*PRLAPA
Trigger: TGCAGGAGCAAGGCGGGGCCAAGGCTTGAGCGCCCC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTTCGGGCTCCCAGCCATaGGGGGCGCTCAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETSGSQP*GALKPW
Trigger: CCAAGGCTTGAGCGCCCCCCATGGCTGGGAGCCCGA...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGTACCGATCGATCCCTaGGTGGCCGGGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETVPIDP*VAGAGA
Trigger: TGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTAC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCGAAAAGCCCATTTCCTaGAAGGCAAAGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCEKPIS*KAKWAE
Trigger: CTCTGCCCACTTTGCCTTCCAGGAAATGGGCTTTTC...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCCTTTGTGACCTGCTTTaGCCCACAGAATGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCLCDLL*PTECGR
Trigger: TCTGCCACATTCTGTGGGCCAAAGCAGGTCACAAAG...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATCCACGCAGTGCCCTGTaGTGGACAGATGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYPRSAL*WTDGKG
Trigger: CCCCTTGCCATCTGTCCACCACAGGGCACTGCGTGG...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGCAGAGCCATGCGGGTaGGTCAGGAGGAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYAEPCG*VRRSSK
Trigger: CTTGCTGCTCCTCCTGACCCACCCGCATGGCTCTGC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCACCTCCTCTGAGCCGGTaGTCAATGTGTTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAPPLSR*SMCYSS
Trigger: GGAAGAATAACACATTGACCACCGGCTCAGAGGAGG...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGAAGCGAAGTGCTCAGTaGGATGACAGTCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKKRSAQ*DDSHSR
Trigger: TCTGCTGTGACTGTCATCTCACTGAGCACTTCGCTT...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTGCAGTTGCAGCTTTCTaGACCCACTGTGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCAVAAF*THCALC
Trigger: ACACAGAGCACAGTGGGTTCAGAAAGCTGCAACTGC...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGCAAGAGTTTGTTTGTTaGGCTGAGGTGAAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQQEFVC*AEVKGE
Trigger: TTCACCCTTCACCTCAGCTCAACAAACAAACTCTTG...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTATTGGCTTGGCTTCAGTaGTCCCACCTAGACCCCGCC +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLLAWLQ*SHLDPA
Trigger: GGCGGGGTCTAGGTGGGATCACTGAAGCCAAGCCAA...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGGCACCAGGAATACCATaGCAAACTAGCCCACATAGC +
Preference number: 4 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKAPGIP*QTSPHS
Trigger: GCTATGTGGGCTAGTTTGTCATGGTATTCCTGGTGC...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATCAGAGAAGTAGCCTaGAAGGCAAGGTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCIREVA*KARFAH
Trigger: GTGTGCAAACCTTGCCTTGCAGGCTACTTCTCTGAT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGTGCCACAAATTACTaGTGCGAGTTTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCSATNY*CEFEEW
Trigger: CCACTCCTCAAACTCGCAGCAGTAATTTGTGGCACT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATAAGCTGGGCGTGGCCTaGAGCTGTGATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYKLGVA*SCDPSY
Trigger: GTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTT...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCTTTGCGGGGAACCAGTaGTCACTGGGTAACAAAAGA +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCFAGNQ*SLGNKR
Trigger: TCTTTTGTTACCCAGTGAGCACTGGTTCCCCGCAAA...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGTGATCCACAGTCATaGTCTTCAGCTGGGCATTTG +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCSDPQS*SSAGHL
Trigger: CAAATGCCCAGCTGAAGAGCATGACTGTGGATCACT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTGAATGCACTCTTCTCTaGAGCATTTTACTCCACGCA +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFECTLL*SILLHA
Trigger: TGCGTGGAGTAAAATGCTGCAGAGAAGAGTGCATTC...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGGACATAGGATTGTTTTaGCGCAGTAGGCAGTTCCGC +
Preference number: 4 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKDIGLF*RSRQFR
Trigger: GCGGAACTGCCTACTGCGGCAAAACAATCCTATGTC...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGTCTTGTGGGTGTGCCTaGCCACTGGGACATTTATTC +
Preference number: 4 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKSCGCA*PLGHLF
Trigger: GAATAAATGTCCCAGTGGGCAGGCACACCCACAAGA...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAAGTCATGAACCAGGTCTaGCTGCAAAACGTCTGCATT +
Preference number: 4 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKVMNQV*LQNVCI
Trigger: AATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGCATAATGCTTCTCACTaGTACATGGAGGAGCGATCT +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQHNASH*YMEERS
Trigger: AGATCGCTCCTCCATGTACCAGTGAGAAGCATTATG...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTCAGTCCTGGCTCCAGTaGTACCCAGCCGTGCACGCG +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETQSWLQ*YPAVHA
Trigger: CGCGTGCACGGCTGGGTACCACTGGAGCCAGGACTG...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACACAGTCCTGGCTCCAGTaGTACCCAGCCGTGCACGCG +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTQSWLQ*YPAVHA
Trigger: CGCGTGCACGGCTGGGTACCACTGGAGCCAGGACTG...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCGTCTGCATTTGTCCGTaGAGGAAAAGGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCVCICP*RKRHQR
Trigger: TCTCTGATGCCTTTTCCTCCACGGACAAATGCAGAC...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTAGGGGCGCTCAAGCCTTaGCCCCGCCTTGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVGALKP*PRLAPA
Trigger: TGCAGGAGCAAGGCGGGGCCAAGGCTTGAGCGCCCC...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAGCTGCTGAGCATCCGTaGGCATGGGGACAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLAAEHP*AWGQSS
Trigger: TGAGGACTGTCCCCATGCCCACGGATGCTCAGCAGC...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGTCATGCTCTTCAGCTaGGCATTTGTGGCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAVMLFS*AFVASK
Trigger: TTTACTGGCCACAAATGCCCAGCTGAAGAGCATGAC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGATGGGGTTCATTTGGTaGTTTTCTAGCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQMGFIW*FSSWQR
Trigger: TCTCTGCCAGCTAGAAAACCACCAAATGAACCCCAT...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAAGACATCTGCCCAGTTaGGGCTGGGGCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTRHLPS*GWGWLP
Trigger: GGGCAGCCAGCCCCAGCCCCAACTGGGCAGATGTCT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTTTTCAGCTCTTTCACTaGGTACCCAGGCTGTATTTT +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVFQLFH*VPRLYF
Trigger: AAAATACAGCCTGGGTACCCAGTGAAAGAGCTGAAA...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGTGTCACCAGCTCCTTaGTTAGTACGAAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAVSPAP*LVRRSG
Trigger: ACCAGATCTTCGTACTAACCAAGGAGCTGGTGACAC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CAA 72 bp TGGGACATTTATTCGGTCCTCCTCTTTGTTGAAACCTaGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: WDIYSVLLFVET*GDIGLFCRSRQ
Trigger: CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAGGACCGAATAAATGTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATACACTGTGTCCTTGTTaGGCTGCAACGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDTLCPC*AATGAG
Trigger: CCCAGCACCCGTTGCAGCTCAACAAGGACACAGTGT...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAACTTTATTCTTCCTTaGACTTCCCGGGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCNFILP*TSRALS
Trigger: AGAAAGGGCCCGGGAAGTTCAAGGAAGAATAAAGTT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAAAACTTTATTCTTCCTTaGACTTCCCGGGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKNFILP*TSRALS
Trigger: AGAAAGGGCCCGGGAAGTTCAAGGAAGAATAAAGTT...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAAACTTTATTCTTCCTTaGACTTCCCGGGCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPANFILP*TSRALS
Trigger: AGAAAGGGCCCGGGAAGTTCAAGGAAGAATAAAGTT...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGAAGTGCTCAGTGAGATaGCAGTCACAGCAGAAACTC +
Preference number: 4 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKKCSVR*QSQQKL
Trigger: GAGTTTCTGCTGTGACTGTCATCTCACTGAGCACTT...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTATCTGGGCTGCCTTTGTaGCCTGCTTTGGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLSGLPL*PALAHR
Trigger: TCTGTGGGCCAAAGCAGGTCACAAAGGCAGCCCAGA...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGATCAGAGAAGTAGCCTaGAAGGCAAGGTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKIREVA*KARFAH
Trigger: GTGTGCAAACCTTGCCTTGCAGGCTACTTCTCTGAT...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACTTGAAGTTCATCACCTaGCCGCTGGAGATGAACGTG +
Preference number: 4 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNLKFIT*PLEMNV
Trigger: CACGTTCATCTCCAGCGGGCAGGTGATGAACTTCAA...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTACAGGGGGAAGGCCCATaGCATAGGCGCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVQGEGP*HRRTGA
Trigger: TGCCCCAGTGCGCCTATGGCATGGGCCTTCCCCCTG...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTGAAAAGCCCATTTCCTaGAAGGCAAAGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCEKPIS*KAKWAE
Trigger: CTCTGCCCACTTTGCCTTCCAGGAAATGGGCTTTTC...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTGCGAGTTTGAGGAGTaGCAGGGGAGACATCTGCCC +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDCEFEE*QGRHLP
Trigger: GGGCAGATGTCTCCCCTGCCACTCCTCAAACTCGCA...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGGAGGAAGCTGGGCGTaGCCTGCAGCTGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETGGSWA*PAAVIP
Trigger: TGGGATCACAGCTGCAGGCCACGCCCAGCTTCCTCC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTGGAACCAGTGCTCACTaGGTAACAAAAGATAAAACC +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFGTSAH*VTKDKT
Trigger: GGTTTTATCTTTTGTTACCCAGTGAGCACTGGTTCC...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTACCAACGGATCCTCCTaGCTGTGCAGTTATTTCCTG +
Preference number: 4 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCTNGSS*LCSYFL
Trigger: CAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGT...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATCAAGGGTCCACGTTTTaGGGAACCCACGAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYQGSTF*GTHEGF
Trigger: GAACCCCTCGTGGGTTCCCCAAAACGTGGACCCTTG...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTACCTCGGGCTGGTCTCTaGCCTCCGTCCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVPRAGL*PPSCWL
Trigger: AAGCCAGCAGGACGGAGGCCAGAGACCAGCCCGAGG...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTCTGCCAGTGAGTGCTTaGTTGTCTCTCATCTCACGT +
Preference number: 4 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCLPVSA*LSLISR
Trigger: ACGTGAGATGAGAGACAACCAAGCACTCACTGGCAG...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATCCTGCCCGCTGGAGATaGACGTGGAGTTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDPARWR*TWSYCF
Trigger: GAAACAGTAACTCCACGTTCATCTCCAGCGGGCAGG...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATTTACTGCTGCGAGTTTaGGGAGTGGCAGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYLLLRV*GVAGET
Trigger: TGTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAA...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTGCAATAAGATACAAATaGACGGTTGACACCATACCA +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIAIRYK*TVDTIP
Trigger: TGGTATGGTGTCAACCGTTCATTTGTATCTTATTGC...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTGCAATAAGATACAAATaGACGGTTGACACCATACCA +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFAIRYK*TVDTIP
Trigger: TGGTATGGTGTCAACCGTTCATTTGTATCTTATTGC...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCAGCTGAGTAAAATGTaGGTAGGAAACATGATACTC +
Preference number: 4 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFQLSKM*VGNMIL
Trigger: GAGTATCATGTTTCCTACTCACATTTTACTCAGCTG...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGCAGCTGAGTAAAATGTaGGTAGGAAACATGATACTC +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQQLSKM*VGNMIL
Trigger: GAGTATCATGTTTCCTACTCACATTTTACTCAGCTG...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACACATGGAGGAGCGATCTaGAAAGCCACCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTHGGAI*KATCSR
Trigger: CCGGCTGCAGGTGGCTTTGCAGATCGCTCCTCCATG...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTAAGCTGGGCGTGGCCTaGAGCTGTGATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETKLGVA*SCDPSY
Trigger: GTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTT...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTTGCACCAGACTCACATaGCATCAGAGACTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCCTRLT*HQRLSK
Trigger: CTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCA...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAGCTGCTGAGCATCCGTaGGCATGGGGACAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTAAEHP*AWGQSS
Trigger: TGAGGACTGTCCCCATGCCCACGGATGCTCAGCAGC...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGCACTGCACTCTAGCCTaGGCCAGAGCCAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRHCTLA*ARARLP
Trigger: TGGCAACCTGGCTCTGGCCCAGGCTAGAGTGCAGTG...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATGTAATCCCAGTACTTTaGGAGGCCGAGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDVIPVL*EAEAGG
Trigger: TCCTCCAGCCTCGGCCTCCCAAAGTACTGGGATTAC...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTTGCAGTTCTTTATGTTaGCTAAGGAGTCCCATAAAT +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVCSSLC*LRSPIN
Trigger: ATTTATGGGACTCCTTAGCCAACATAAAGAACTGCA...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGAACATGGGGTTCATTTaGTGGTTTTCTAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKNMGFI*WFSSWQ
Trigger: CTGCCAGCTAGAAAACCACCAAATGAACCCCATGTT...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACGACACCACCTTGATCTaGGTAGCACATATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNDTTLI*VAHIFW
Trigger: CCAGAAGATATGTGCTACCCAGATCAAGGTGGTGTC...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGCCCAGCTAGGTGGCTaGAAGGATGGGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRAQLGG*KDGRQV
Trigger: CACCTGTCTCCCATCCTTCCAGCCACCTAGCTGGGC...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTCTCAAGGACATTATGTaGAAAGAAGCCAGACTCAAA +
Preference number: 4 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVILKDIM*KEARLK
Trigger: TTTGAGTCTGGCTTCTTTCCACATAATGTCCTTGAG...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CAA 72 bp TGTCGTTTTTCTCACGACTTAAAGTCTATACAGCCTTaGTTTCCTGGGCTACCCCTGCCCGTGAGAAACCAA +
Preference number: 4 (lower is better)
Translates to: CRFSHDLKSIQP*FPGLPLPVRNQ
Trigger: TTGGTTTCTCACGGGCAGGGGTAGCCCAGGAAACAAAGGCTGTATAGACTTTAAGTCGTGAGAAAAACGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTACATTTTTCAGAATATaGAAGTCCCACCACATGTTC +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFTFFRI*KSHHMF
Trigger: GAACATGTGGTGGGACTTTCATATTCTGAAAAATGT...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATCTATCTCGGTCTTGCTaGCCAATGAGAGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDLSRSC*PMRASW
Trigger: CCAGGATGCTCTCATTGGTCAGCAAGACCGAGATAG...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTATGCTCTGTGTCCCCGTaGAGCACTGGCTTAAACTGT +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLCSVSP*STGLNC
Trigger: ACAGTTTAAGCCAGTGCTTCACGGGGACACAGAGCA...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGGTCCTCCTCTTTGTTaGAACCTTGGGGGACATAGG +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYGPPLC*NLGGHR
Trigger: CCTATGTCCCCCAAGGTTTCAACAAAGAGGAGGACC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGTGTGCAGTTATTTCCTaGAGTTCTTTATGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQCAVIS*SSLCWL
Trigger: TAGCCAACATAAAGAACTGCAGGAAATAACTGCACA...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAACTTTTCAGTTTTCTGTaGCAAAGGAATGTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKLFSFL*QRNVEA
Trigger: TGCTTCCACATTCCTTTGGCACAGAAAACTGAAAAG...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGAGCATCCGTGGGCATaGGGACAGTCCTCATCAATT +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYEHPWA*GQSSSI
Trigger: AATTGATGAGGACTGTCCCCATGCCCACGGATGCTC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTCAAGCTGCAGCAACTTaGAGTTTTAGAAATTTGCTT +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFQAAAT*SFRNLL
Trigger: AAGCAAATTTCTAAAACTCCAAGTTGCTGCAGCTTG...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTTGCAGTTCTTTATGTTaGCTAAGGAGTCCCATAAAT +
Preference number: 4 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFCSSLC*LRSPIN
Trigger: ATTTATGGGACTCCTTAGCCAACATAAAGAACTGCA...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTGAAAAGGTGAAACTATaGGAAGAGAGAACAGATAAT +
Preference number: 4 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVEKVKL*EERTDN
Trigger: ATTATCTGTTCTCTCTTCCCATAGTTTCACCTTTTC...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTCCTGCCCGCTGGAGATaGACGTGGAGTTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETPARWR*TWSYCF
Trigger: GAAACAGTAACTCCACGTTCATCTCCAGCGGGCAGG...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATATCACTTGGATTGCTTaGGCCCAGGAGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDITWIA*AQELEA
Trigger: AGCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGAT...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTAAGCAAACGCCAAAGATaGTGGCAGCCACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVSKRQR*WQPPGP
Trigger: TGGCCCTGGTGGCTGCCATCATCTTTGGCGTTTGCT...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATCTGTGGGCATCTGTCTaGAGCTGTCTTCCTCTATCT +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDLWASV*SCLPLS
Trigger: AGATAGAGGAAGACAGCTTCAGACAGATGCCCACAG...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGATGTTAGCCTAGCATaGGTTTCAACCTCACCCTGG +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYDVSLA*VSTSPW
Trigger: CCAGGGTGAGGTTGAAACTCATGCTAGGCTAACATC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGAAAGTGGGCAGAGAATaGCGGGTGGTCTTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRKVGRE*RVVFLD
Trigger: GTCGAGGAAGACCACCCGGCATTCTCTGCCCACTTT...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGCCACAAATTACTGCTaGGAGTTTGAGGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYATNYC*EFEEWQ
Trigger: CTGCCACTCCTCAAACTCGCAGCAGTAATTTGTGGC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTTACAGAACTGTCCTGTaGTTCTCCACTGAAAATCCT +
Preference number: 4 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCYRTVL*FSTENP
Trigger: AGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTA...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCTGTGCAGTTATTTCCTaGAGTTCTTTATGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCCAVIS*SSLCWL
Trigger: TAGCCAACATAAAGAACTGCAGGAAATAACTGCACA...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTAGGCATCTTCGCCTTGTaGGTAGGGACCACCTCCTAC +
Preference number: 4 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVGIFAL*VGTTSY
Trigger: GTAGGAGGTGGTCCCTACGCACAAGGCGAAGATGCC...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATAGAACAGATAATGGTTaGCAGGGGCTAGGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYRTDNG*QGLGVV
Trigger: CACTACCCCTAGCCCCTGGCAACCATTATCTGTTCT...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATGAAAAGCCCATTTCCTaGAAGGCAAAGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDEKPIS*KAKWAE
Trigger: CTCTGCCCACTTTGCCTTCCAGGAAATGGGCTTTTC...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCACAAGCTGCAGCAACTTaGAGTTTTAGAAATTTGCTT +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAQAAAT*SFRNLL
Trigger: AAGCAAATTTCTAAAACTCCAAGTTGCTGCAGCTTG...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATGCAGTTCTTTATGTTaGCTAAGGAGTCCCATAAAT +
Preference number: 4 (lower is better)
Translates to: MTVNSHQRILLAVQLFPACSSLC*LRSPIN
Trigger: ATTTATGGGACTCCTTAGCCAACATAAAGAACTGCA...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATACCAACGGATCCTCCTaGCTGTGCAGTTATTTCCTG +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDTNGSS*LCSYFL
Trigger: CAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGT...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTTTTCAGCTCTTTCACTaGGTACCCAGGCTGTATTTT +
Preference number: 4 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCFQLFH*VPRLYF
Trigger: AAAATACAGCCTGGGTACCCAGTGAAAGAGCTGAAA...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGGTGTGCCTGCCCACTaGGACATTTATTCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETGVPAH*DIYSVL
Trigger: GAGGACCGAATAAATGTCCCAGTGGGCAGGCACACC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp CAAAACTACGTTTCTTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTTGTGCAATAAGATACAAATaGACGGTTGACACCATACCA +
Preference number: 4 (lower is better)
Translates to: QNYVSSTKDSTFAQAHPCAIRYK*TVDTIP
Trigger: TGGTATGGTGTCAACCGTTCATTTGTATCTTATTGC...ACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAAGAAACGTAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGCATTCAAACTGCTCTTaGGAAATTCATTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKHSNCS*EIHSSF
Trigger: GAAGGAAGAATGAATTTCTCAAGAGCAGTTTGAATG...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATGGGGAAGGGATTGACTaGAAAGGGAAATGGGAACTT +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDGEGID*KGKWEL
Trigger: AAGTTCCCATTTCCCTTTTCAGTCAATCCCTTCCCC...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTCAAGTCTTGTGGGTGTaGCTGCCCACTGGGACATTT +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETQVLWV*LPTGTF
Trigger: AAATGTCCCAGTGGGCAGGCACACCCACAAGACTTG...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAGAGCATCCGTGGGCATaGGGACAGTCCTCATCAATT +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTEHPWA*GQSSSI
Trigger: AATTGATGAGGACTGTCCCCATGCCCACGGATGCTC...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTAAGGAAGAGAGAAAACTaGACTCACAGCTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLRKREN*THSCAE
Trigger: CTCTGCACAGCTGTGAGTCCAGTTTTCTCTCTTCCT...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp TCAATGTGTTATTCTTCCCAAACGGGGAGAGGCACCAGGAATACCATGACAAACGAAGATGACAACTTTTaGGTCAACCATAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: SMCYSSQTGRGTRNTMTNEDDNF*VNHNSP
Trigger: AGGACTGTTATGGTTGACCCAAAAGTTGTCATCTTC...GTTTGTCATGGTATTCCTGGTGCCTCTCCCCGTTTGGGAAGAATAACACATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAATGTGAAGTTATATTaGGTAAGTCTACTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCNVKLY*VSLLPS
Trigger: TGAGGGAAGTAGACTTACCCAATATAACTTCACATT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
3UTR CAA 72 bp TTCCACCAAAGACAGCACCTTTGCTCAAGCTCACCCTaGTATAATCGTAACAAGAGTTTGTTTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FHQRQHLCSSSP*YNRNKSLFVEL
Trigger: CAGCTCAACAAACAAACTCTTGTTACGATTATACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGATCACTTGGATTGCTTaGGCCCAGGAGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRITWIA*AQELEA
Trigger: AGCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGAT...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACATTGAAGTTCATCACCTaGCCGCTGGAGATGAACGTG +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTLKFIT*PLEMNV
Trigger: CACGTTCATCTCCAGCGGGCAGGTGATGAACTTCAA...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGGATCCTCCTGGCTGTaGAGTTATTTCCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRGSSWL*SYFLQF
Trigger: GAACTGCAGGAAATAACTGCACAGCCAGGAGGATCC...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTAAGCCTGGCAGGTTTCTaGTTGTTCTCAGGCTCGACA +
Preference number: 4 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVSLAGF*LFSGST
Trigger: TGTCGAGCCTGAGAACAAGCAGAAACCTGCCAGGCT...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTATGGTGGTTTTCTAGCTaGCAGAGAAGAACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLWWFSS*QRRTAN
Trigger: GTTTGCAGTTCTTCTCTGCCAGCTAGAAAACCACCA...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGAAAAGCCCATTTCCTaGAAGGCAAAGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETEKPIS*KAKWAE
Trigger: CTCTGCCCACTTTGCCTTCCAGGAAATGGGCTTTTC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTACCAACGGATCCTCCTaGCTGTGCAGTTATTTCCTG +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETTNGSS*LCSYFL
Trigger: CAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGT...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAACCAACGGATCCTCCTaGCTGTGCAGTTATTTCCTG +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTTNGSS*LCSYFL
Trigger: CAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATAACATGGGGTTCATTTaGTGGTTTTCTAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYNMGFI*WFSSWQ
Trigger: CTGCCAGCTAGAAAACCACCAAATGAACCCCATGTT...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTATTCAACCTTCACATCTaGCTATTCTTTGCGCCCTAC +
Preference number: 4 (lower is better)
Translates to: INYRTVLCFSTENPNRPLFNLHI*LFFAPY
Trigger: GTAGGGCGCAAAGAATAGCCAGATGTGAAGGTTGAA...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATCATCAATTCACTTCCTaGAAAGCCCATTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDHQFTS*KAHFLE
Trigger: TTCCAGGAAATGGGCTTTTCAGGAAGTGAATTGATG...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATGTAAAGTCTGGGCAGTaGCTACTATTAGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDVKSGQ*LLLVLS
Trigger: AGAAAGCACTAATAGTAGTCACTGCCCAGACTTTAC...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAAAGTGCTCAGTGAGATaGCAGTCACAGCAGAAACTC +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTKCSVR*QSQQKL
Trigger: GAGTTTCTGCTGTGACTGTCATCTCACTGAGCACTT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGAAGTGCTCAGTGAGATaGCAGTCACAGCAGAAACTC +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRKCSVR*QSQQKL
Trigger: GAGTTTCTGCTGTGACTGTCATCTCACTGAGCACTT...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAAGCAAAAGCTTTCATTaGCTCCAGTGCCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTSKSFH*LQCPPE
Trigger: TTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACACTGGCAGAGAAGAACTaGAAACCGCATCGGATTTCT +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTLAEKN*KPHRIS
Trigger: AGAAATCCGATGCGGTTTGCAGTTCTTCTCTGCCAG...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAAGTGCCACAAATTACTaGTGCGAGTTTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTSATNY*CEFEEW
Trigger: CCACTCCTCAAACTCGCAGCAGTAATTTGTGGCACT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAGAGGATCACTTGGATTaGTTGAGCCCAGGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTEDHLD*LSPGVR
Trigger: TCTAACTCCTGGGCTCAAGCAATCCAAGTGATCCTC...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAGGATCACTTGGATTaGTTGAGCCCAGGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGREDHLD*LSPGVR
Trigger: TCTAACTCCTGGGCTCAAGCAATCCAAGTGATCCTC...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTAGTGATCCACAGTCATaGTCTTCAGCTGGGCATTTG +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETSDPQS*SSAGHL
Trigger: CAAATGCCCAGCTGAAGAGCATGACTGTGGATCACT...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAGTCTGCATTTGTCCGTaGAGGAAAAGGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTVCICP*RKRHQR
Trigger: TCTCTGATGCCTTTTCCTCCACGGACAAATGCAGAC...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGTCTGCATTTGTCCGTaGAGGAAAAGGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETVCICP*RKRHQR
Trigger: TCTCTGATGCCTTTTCCTCCACGGACAAATGCAGAC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGGAACCAGTGCTCACTaGGTAACAAAAGATAAAACC +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYGTSAH*VTKDKT
Trigger: GGTTTTATCTTTTGTTACCCAGTGAGCACTGGTTCC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGTCATGCTCTTCAGCTaGGCATTTGTGGCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRVMLFS*AFVASK
Trigger: TTTACTGGCCACAAATGCCCAGCTGAAGAGCATGAC...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTACAGAGAAAGGAGGTGTaGATTTGCTTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVQRKEV*ICFQAQ
Trigger: CTGAGCCTGGAAGCAAATCCACACCTCCTTTCTCTG...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTTTCAGCTCTTTCACTaGGTACCCAGGCTGTATTTT +
Preference number: 4 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDFQLFH*VPRLYF
Trigger: AAAATACAGCCTGGGTACCCAGTGAAAGAGCTGAAA...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACATGTGCCAAAGGAATGTaGAAGCAGTACAGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTCAKGM*KQYSRL
Trigger: GAGCCTACTGTACTGCTTCCACATTCCTTTGGCACA...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGCTGCTGCTGCTTAAATaGAGACAGTCTCTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRLLLLK*RQSLRA
Trigger: GGCTCTTAGAGACTGTCTCCATTTAAGCAGCAGCAG...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR TCA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATGCAATAAGATACAAATaGACGGTTGACACCATACCA +
Preference number: 4 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYAIRYK*TVDTIP
Trigger: TGGTATGGTGTCAACCGTTCATTTGTATCTTATTGC...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGCATAATGCTTCTCACTaGTACATGGAGGAGCGATCT +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRHNASH*YMEERS
Trigger: AGATCGCTCCTCCATGTACCAGTGAGAAGCATTATG...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTATGGGGTTCATTTGGTaGTTTTCTAGCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETMGFIW*FSSWQR
Trigger: TCTCTGCCAGCTAGAAAACCACCAAATGAACCCCAT...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAAACATGGGGTTCATTTaGTGGTTTTCTAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTNMGFI*WFSSWQ
Trigger: CTGCCAGCTAGAAAACCACCAAATGAACCCCATGTT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGTAAAGTCTGGGCAGTaGCTACTATTAGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETVKSGQ*LLLVLS
Trigger: AGAAAGCACTAATAGTAGTCACTGCCCAGACTTTAC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGTGTCATGTCAGAAGATaGCAACTTTTGGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRCHVRR*QLLGQP
Trigger: TGGTTGACCCAAAAGTTGTCATCTTCTGACATGACA...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTTACAGAACTGTCCTGTaGTTCTCCACTGAAAATCCT +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETYRTVL*FSTENP
Trigger: AGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTA...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CCA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGGAACCAGTGCTCACTaGGTAACAAAAGATAAAACC +
Preference number: 4 (lower is better)
Translates to: RYFNIHCSILLISLGRETGTSAH*VTKDKT
Trigger: GGTTTTATCTTTTGTTACCCAGTGAGCACTGGTTCC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR GCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGGTAAGATGTTTTACTaGTGCTGCTTAAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRGKMFY*CCLNGD
Trigger: GTCTCCATTTAAGCAGCAGCAGTAAAACATCTTACC...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CCA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGCAAGCTGCAGCAACTTaGAGTTTTAGAAATTTGCTT +
Preference number: 4 (lower is better)
Translates to: ISRYFNIHCSILLISLGRQAAAT*SFRNLL
Trigger: AAGCAAATTTCTAAAACTCCAAGTTGCTGCAGCTTG...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR TCA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTAACATTTTTCAGAATATaGAAGTCCCACCACATGTTC +
Preference number: 4 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVTFFRI*KSHHMF
Trigger: GAACATGTGGTGGGACTTTCATATTCTGAAAAATGT...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAGAATCTATAGTGCTGTaGATTAAGGGAATTCAATCA +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTESIVL*IKGIQS
Trigger: TGATTGAATTCCCTTAATGCACAGCACTATAGATTC...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACATTTTATCTGTTTATATaGAGGTTTCTCTACCCCAAG +
Preference number: 4 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTFYLFI*RFLYPK
Trigger: CTTGGGGTAGAGAAACCTGCATATAAACAGATAAAA...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR GCA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTAAAGATGTTTTACTGCTaGTGCTTAAATGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVKMFYC*CLNGDS
Trigger: ACTGTCTCCATTTAAGCAGCAGCAGTAAAACATCTT...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS GCA 90 bp GCTGCAACGGGTGCTGGGCGCCCAGGCCCGGCGCGCACTCGGTGTTaGGGCGGCAGCACTCGCAGTCCTGGCTCCAGTGGTACCCAGCCG +
Preference number: 5 (lower is better)
Translates to: AATGAGRPGPARTRC*GGSTRSPGSSGTQP
Trigger: CGGCTGGGTACCACTGGAGCCAGGACTGCGAGTGCTGCCGCCGCAACACCGAGTGCGCGCCGGGCCTGGGCGCCCAGCACCCGTTGCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
ENST00000639222.1
CDS-3UTR CAA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGGCGCGCACTCGGTGTaGCGGCGGCAGCACTCGCAG +
Preference number: 5 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEGAHSV*RRQHSQ
Trigger: CTGCGAGTGCTGCCGCCGCAACACCGAGTGCGCGCC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGCCTTGGCCCCGCCTaGCTCCTGCACCGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQSLGPA*LLHRPR
Trigger: TCGAGGCCGGTGCAGGAGCAAGGCGGGGCCAAGGCT...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS TCA 90 bp GGACTGGCCACCAGGGGAGCTTCCAGACCCGGCACCTGCCCTCGCTaGGCTTGGGAGCCTCCCATCAGCCCCATCCTCGGGCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: GLATRGASRPGTCPR*AWEPPISPILGLVS
Trigger: AGAGACCAGCCCGAGGATGGGGCTGATGGGAGGCTCCCAAGCTCAGCGAGGGCAGGTGCCGGGTCTGGAAGCTCCCCTGGTGGCCAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGGCGCGCACTCGGTGTaGCGGCGGCAGCACTCGCAG +
Preference number: 5 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVGAHSV*RRQHSQ
Trigger: CTGCGAGTGCTGCCGCCGCAACACCGAGTGCGCGCC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGAGCCTTGGCCCCGCCTaGCTCCTGCACCGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVSLGPA*LLHRPR
Trigger: TCGAGGCCGGTGCAGGAGCAAGGCGGGGCCAAGGCT...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS GCA 90 bp GCCTCCCATCAGCCCCATCCTCGGGCTGGTCTCTGGCCTCCGTCCTaGTGGCTTCTTCTTCAGGGGGAAGGCCCATGCCATAGGCGCACT +
Preference number: 5 (lower is better)
Translates to: ASHQPHPRAGLWPPS*WLLLQGEGPCHRRT
Trigger: AGTGCGCCTATGGCATGGGCCTTCCCCCTGAAGAAGAAGCCAGCAGGACGGAGGCCAGAGACCAGCCCGAGGATGGGGCTGATGGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGCTGCCCTCGCTGAGCTaGGGAGCCTCCCATCAGCCC +
Preference number: 5 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVLPSLS*GASHQP
Trigger: GGGCTGATGGGAGGCTCCCAAGCTCAGCGAGGGCAG...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGCACACTGTGTCCTTGTaGAGCTGCAACGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQHTVSL*SCNGCW
Trigger: CCAGCACCCGTTGCAGCTCAACAAGGACACAGTGTG...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGAGGAGCAGCAAGTCTaGTGGGTGTGCCTGCCCACT +
Preference number: 5 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEEEQQV*WVCLPT
Trigger: AGTGGGCAGGCACACCCACAAGACTTGCTGCTCCTC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGTTGCACACTGTGTCCTaGTTGAGCTGCAACGGGTGC +
Preference number: 5 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQLHTVS*LSCNGC
Trigger: GCACCCGTTGCAGCTCAACAAGGACACAGTGTGCAA...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGGCTTGGAGCAGAGCATaGTCTCGTCTTCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQAWSRA*SRLLCS
Trigger: GGAGCAGAGAAGACGAGACAATGCTCTGCTCCAAGC...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS GCA 90 bp CTTCAGGGTGAAATCCAGTGCTTCTCCAATGTGCGCAGAATCACCTaGAGCCGGGCGAGCAGCGCGCAGAGCAGCAGCAGCGCGAACAGC +
Preference number: 5 (lower is better)
Translates to: LQGEIQCFSNVRRIT*SRASSAQSSSSANS
Trigger: GCTGTTCGCGCTGCTGCTGCTCTGCGCGCTGCTCGCCCGGCTGCAGGTGATTCTGCGCACATTGGAGAAGCACTGGATTTCACCCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592013.1
CDS-3UTR CAA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGGGCGCGCACTCGGTGTaGCGGCGGCAGCACTCGCAG +
Preference number: 5 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRGAHSV*RRQHSQ
Trigger: CTGCGAGTGCTGCCGCCGCAACACCGAGTGCGCGCC...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGTTGCACACTGTGTCCTaGTTGAGCTGCAACGGGTGC +
Preference number: 5 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAELHTVS*LSCNGC
Trigger: GCACCCGTTGCAGCTCAACAAGGACACAGTGTGCAA...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGGGGGGCGCTCAAGCCTaGGCCCCGCCTTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKGGAQA*APPCSC
Trigger: GCAGGAGCAAGGCGGGGCCAAGGCTTGAGCGCCCCC...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGCACACTGTGTCCTTGTaGAGCTGCAACGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVHTVSL*SCNGCW
Trigger: CCAGCACCCGTTGCAGCTCAACAAGGACACAGTGTG...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGAGCCTTGGCCCCGCCTaGCTCCTGCACCGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRSLGPA*LLHRPR
Trigger: TCGAGGCCGGTGCAGGAGCAAGGCGGGGCCAAGGCT...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGGGGGGCGCTCAAGCCTaGGCCCCGCCTTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQGGAQA*APPCSC
Trigger: GCAGGAGCAAGGCGGGGCCAAGGCTTGAGCGCCCCC...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGGATCACTTGGATTGCTaGAGCCCAGGAGTTAGAGGC +
Preference number: 5 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEDHLDC*SPGVRG
Trigger: GCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGATC...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTGCAGCCATGGGGGTGTaGGTCCAGGGCGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFAAMGV*VQGGSP
Trigger: GGGGGAGCCGCCCTGGACCAACACCCCCATGGCTGC...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGTTTCCTGGTTCACATTaGTTACAGCACCGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQFPGSH*LQHRPR
Trigger: TCTGGGACGGTGCTGTAACAAATGTGAACCAGGAAA...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGGCGCGCACTCGGTGTaGCGGCGGCAGCACTCGCAG +
Preference number: 5 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAGAHSV*RRQHSQ
Trigger: CTGCGAGTGCTGCCGCCGCAACACCGAGTGCGCGCC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGGTCCAGGGTCTGCATTaGTCCGTGGAGGAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVVQGLH*SVEEKA
Trigger: TGCCTTTTCCTCCACGGACAAATGCAGACCCTGGAC...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGACGATGATGTCGCCCTaGAAGTTCATCACCTGCCCG +
Preference number: 5 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVTMMSP*KFITCP
Trigger: CGGGCAGGTGATGAACTTCAAGGGCGACATCATCGT...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTAGCCTTGGCCCCGCCTaGCTCCTGCACCGGCCTCGA +
Preference number: 5 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFSLGPA*LLHRPR
Trigger: TCGAGGCCGGTGCAGGAGCAAGGCGGGGCCAAGGCT...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCAGGGGGCGCTCAAGCCTaGGCCCCGCCTTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAGGAQA*APPCSC
Trigger: GCAGGAGCAAGGCGGGGCCAAGGCTTGAGCGCCCCC...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGAGGTGGGAGGATCACTaGGATTGCTTGAGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVRWEDH*DCLSPG
Trigger: TCCTGGGCTCAAGCAATCCAAGTGATCCTCCCACCT...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGTGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGCAACTTTATTCTTCCTaGAACTTCCCGGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: GGLPRLYRSIPGWPGLGQQLYSS*NFPGPF
Trigger: GAAAGGGCCCGGGAAGTTCAAGGAAGAATAAAGTTG...CTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGCGGCCACAAGCCTCATaGATCCAGTGCCACAAATTA +
Preference number: 5 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAERPQAS*IQCHKL
Trigger: TAATTTGTGGCACTGGATCAATGAGGCTTGTGGCCG...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586569.3
ENST00000616710.4
CDS GCA 90 bp CCAGGAGTCCCCAAAGTGACGGAAGGAGGAAGCATTCCCCTTACCTaGTGCCCTCCCTTCCTTCACTGCCCAGCCTTCAGGGTGAAATCC +
Preference number: 5 (lower is better)
Translates to: PGVPKVTEGGSIPLT*CPPFLHCPAFRVKS
Trigger: GGATTTCACCCTGAAGGCTGGGCAGTGAAGGAAGGGAGGGCAGCAGGTAAGGGGAATGCTTCCTCCTTCCGTCACTTTGGGGACTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592013.1
CDS CCA 90 bp GTTACAGCACCGTCCCAGATGCTCATAATGCTTCTCACTGGTACATaGAGGAGCGATCTGCAAAGCCACCTGCAGCCGGGCGAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: VTAPSQMLIMLLTGT*RSDLQSHLQPGEQR
Trigger: GCGCTGCTCGCCCGGCTGCAGGTGGCTTTGCAGATCGCTCCTCCATGTACCAGTGAGAAGCATTATGAGCATCTGGGACGGTGCTGTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
ENST00000639222.1
CDS-3UTR CAA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGTTTCCTGGTTCACATTaGTTACAGCACCGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEFPGSH*LQHRPR
Trigger: TCTGGGACGGTGCTGTAACAAATGTGAACCAGGAAA...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGTCTTCAGCTGGGCATTaGTGGCCAGTAAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVSSAGH*WPVKSG
Trigger: CCCAGACTTTACTGGCCACAAATGCCCAGCTGAAGA...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGAAGCTCACAGTAACCTaGAACTCCTGGACTCAAGCA +
Preference number: 5 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAEKLTVT*NSWTQA
Trigger: TGCTTGAGTCCAGGAGTTCAAGGTTACTGTGAGCTT...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS TCA 90 bp CCAGGGGTTCAGAGAAAGGAGGTGTGGATTTGCTTCCAGGCTCAGTaGGGAACAGTAACTGGTCTGTGGGCTGGGAGGGCCTGTCCATGT +
Preference number: 5 (lower is better)
Translates to: PGVQRKEVWICFQAQ*GTVTGLWAGRACPC
Trigger: ACATGGACAGGCCCTCCCAGCCCACAGACCAGTTACTGTTCCTCACTGAGCCTGGAAGCAAATCCACACCTCCTTTCTCTGAACCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGCTGCTCCCCCATCCCTaGGATCTGGGCTGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKLLPHP*DLGCLC
Trigger: ACAAAGGCAGCCCAGATCCAAGGGATGGGGGAGCAG...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGACATCTGGCTATTCTTaGCGCCCTACATGTTGCCTA +
Preference number: 5 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVTSGYS*RPTCCL
Trigger: TAGGCAACATGTAGGGCGCAAAGAATAGCCAGATGT...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTCACACTGTGTCCTTGTaGAGCTGCAACGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVHTVSL*SCNGCW
Trigger: CCAGCACCCGTTGCAGCTCAACAAGGACACAGTGTG...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TGGTCTTCCTCGACTGTACCGATCGATCCCTGGGTGGCCGGGGCTGGGGCAGAGAATGGTTTCCTCCATTaGTATAACATCTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: WSSSTVPIDPWVAGAGAENGFLH*YNISLW
Trigger: CCACAGAGAGATGTTATACAAATGGAGGAAACCATT...CTCTGCCCCAGCCCCGGCCACCCAGGGATCGATCGGTACAGTCGAGGAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAACCTGGCATCTTCGCCTaGTGCGTAGGGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKPGIFA*CVGTTS
Trigger: GGAGGTGGTCCCTACGCACAAGGCGAAGATGCCAGG...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTGCAAGGGTCCACGTTTaGGGGAACCCACGAGGGGTT +
Preference number: 5 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFARVHV*GNPRGV
Trigger: AACCCCTCGTGGGTTCCCCAAAACGTGGACCCTTGC...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS TCA 90 bp CATCTGTCTGAAGCTGTCTTCCTCTATCTCGGTCTTGCTGACCAATaGGAGCATCCTGGCATCTTCGCCTTGTGCGTAGGGACCACCTCC +
Preference number: 5 (lower is better)
Translates to: HLSEAVFLYLGLADQ*EHPGIFALCVGTTS
Trigger: GGAGGTGGTCCCTACGCACAAGGCGAAGATGCCAGGATGCTCTCATTGGTCAGCAAGACCGAGATAGAGGAAGACAGCTTCAGACAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS GCA 90 bp TCCTGGCATCTTCGCCTTGTGCGTAGGGACCACCTCCTACACATGTaGCCTGACAGACACCACCTTGATCTGGGTAGCACATATCTTCTG +
Preference number: 5 (lower is better)
Translates to: SWHLRLVRRDHLLHM*PDRHHLDLGSTYLL
Trigger: CAGAAGATATGTGCTACCCAGATCAAGGTGGTGTCTGTCAGGGCACATGTGTAGGAGGTGGTCCCTACGCACAAGGCGAAGATGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS CCA 90 bp CACATTTGTTACAGCACCGTCCCAGATGCTCATAATGCTTCTCACTaGTACATGGAGGAGCGATCTGCAAAGCCACCTGCAGCCGGGCGA +
Preference number: 5 (lower is better)
Translates to: HICYSTVPDAHNASH*YMEERSAKPPAAGR
Trigger: TCGCCCGGCTGCAGGTGGCTTTGCAGATCGCTCCTCCATGTACCAGTGAGAAGCATTATGAGCATCTGGGACGGTGCTGTAACAAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
ENST00000639222.1
CDS-3UTR CAA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGTTGCACACTGTGTCCTaGTTGAGCTGCAACGGGTGC +
Preference number: 5 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRLHTVS*LSCNGC
Trigger: GCACCCGTTGCAGCTCAACAAGGACACAGTGTGCAA...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGGTCCAGGGTCTGCATTaGTCCGTGGAGGAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRVQGLH*SVEEKA
Trigger: TGCCTTTTCCTCCACGGACAAATGCAGACCCTGGAC...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGACGATGATGTCGCCCTaGAAGTTCATCACCTGCCCG +
Preference number: 5 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKTMMSP*KFITCP
Trigger: CGGGCAGGTGATGAACTTCAAGGGCGACATCATCGT...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp ATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTTGTGCCCAGCGCAGCCATTACTGCTGCGAGTTaGAGGAGTGGCAGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: MLCLLFQKRVMQLVPSAAITAAS*RSGRGD
Trigger: GTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAAT...GGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGCCTGCACCACTTGGCTaGGCTTCAGTGATCCCACCT +
Preference number: 5 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQPAPLG*ASVIPP
Trigger: AGGTGGGATCACTGAAGCCAAGCCAAGTGGTGCAGG...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS TCA 90 bp CACCTTCACATGCTCCCTGCTGACCAAAGTTTGCCGTGTGTGTACTaGCACAACTGTCACCTGAGGACTCCTTATCTCCACTTAGGCGGC +
Preference number: 5 (lower is better)
Translates to: HLHMLPADQSLPCVY*HNCHLRTPYLHLGG
Trigger: GCCGCCTAAGTGGAGATAAGGAGTCCTCAGGTGACAGTTGTGTCAGTACACACACGGCAAACTTTGGTCAGCAGGGAGCATGTGAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS GCA 90 bp GGGTCTGCATTTGTCCGTGGAGGAAAAGGCATCAGAGAAGTAGCCTaGAAGGCAAGGTTTGCACACTGTGTCCTTGTTGAGCTGCAACGG +
Preference number: 5 (lower is better)
Translates to: GSAFVRGGKGIREVA*KARFAHCVLVELQR
Trigger: CCGTTGCAGCTCAACAAGGACACAGTGTGCAAACCTTGCCTTGCAGGCTACTTCTCTGATGCCTTTTCCTCCACGGACAAATGCAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
ENST00000639222.1
CDS CCA 90 bp GATTTGCTTCCAGGCTCAGTGAGGAACAGTAACTGGTCTGTGGGCTaGGAGGGCCTGTCCATGTATTCATCTTCTGTGGGCATCTGTCTG +
Preference number: 5 (lower is better)
Translates to: DLLPGSVRNSNWSVG*EGLSMYSSSVGICL
Trigger: CAGACAGATGCCCACAGAAGATGAATACATGGACAGGCCCTCCCAGCCCACAGACCAGTTACTGTTCCTCACTGAGCCTGGAAGCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGCCTGCAAGGCAAGGTTaGCACACTGTGTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKPARQG*HTVSLL
Trigger: CAACAAGGACACAGTGTGCAAACCTTGCCTTGCAGG...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTCCTGCAAGGCAAGGTTaGCACACTGTGTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVPARQG*HTVSLL
Trigger: CAACAAGGACACAGTGTGCAAACCTTGCCTTGCAGG...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTGTCCAGGGTCTGCATTaGTCCGTGGAGGAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFVQGLH*SVEEKA
Trigger: TGCCTTTTCCTCCACGGACAAATGCAGACCCTGGAC...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTACGATGATGTCGCCCTaGAAGTTCATCACCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFTMMSP*KFITCP
Trigger: CGGGCAGGTGATGAACTTCAAGGGCGACATCATCGT...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTATTACTGCTGCGAGTTaGAGGAGTGGCAGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFITAAS*RSGRGD
Trigger: GTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAAT...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTAGGTGGGAGGATCACTaGGATTGCTTGAGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIRWEDH*DCLSPG
Trigger: TCCTGGGCTCAAGCAATCCAAGTGATCCTCCCACCT...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTCAGCTACTCCGAAGGTaGAGGTGGGAGGATCACTTG +
Preference number: 5 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFQLLRR*RWEDHL
Trigger: CAAGTGATCCTCCCACCTCAACCTTCGGAGTAGCTG...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCAGCTACTCCGAAGGTaGAGGTGGGAGGATCACTTG +
Preference number: 5 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFQLLRR*RWEDHL
Trigger: CAAGTGATCCTCCCACCTCAACCTTCGGAGTAGCTG...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTTGTGCCCAGCGCAGCCAAAGGAGGTGTGGATTaGCTTCCAGGCTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: MLCLLFQKRVMQLVPSAAKGGVD*LPGSVR
Trigger: CCTCACTGAGCCTGGAAGCAAATCCACACCTCCTTT...GGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp AAGGGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTTTGGGGGACATAGGATaGTTTTGCCGCAGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: KGRNDGKFPPTDPPGCAVLGDIG*FCRSRQ
Trigger: CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAA...AACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS GCA 90 bp GGGTCTGCATTTGTCCGTGGAGGAAAAGGCATCAGAGAAGTAGCCTaGAAGGCAAGGTTTGCACACTGTGTCCTTGTTGAGCTGCACTGT +
Preference number: 5 (lower is better)
Translates to: GSAFVRGGKGIREVA*KARFAHCVLVELHC
Trigger: ACAGTGCAGCTCAACAAGGACACAGTGTGCAAACCTTGCCTTGCAGGCTACTTCTCTGATGCCTTTTCCTCCACGGACAAATGCAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587697.1
CDS CCA 90 bp AAAGGAGGTGTGGATTTGCTTCCAGGCTCAGTGAGGAACAGTAACTaGTCTGTGGGCTGGGAGGGCCTGTCCATGTATTCATCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: KGGVDLLPGSVRNSN*SVGWEGLSMYSSSV
Trigger: CACAGAAGATGAATACATGGACAGGCCCTCCCAGCCCACAGACCAGTTACTGTTCCTCACTGAGCCTGGAAGCAAATCCACACCTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTACGGCCACCAGGGCCTaGCCTGTATCACAAACTTTA +
Preference number: 5 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFTATRA*PVSQTL
Trigger: TAAAGTTTGTGATACAGGCAAGGCCCTGGTGGCCGT...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCCAAGGAAGGTACAGTaGGTCCAGGGTCTGCATTTG +
Preference number: 5 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFPRKVQ*VQGLHL
Trigger: CAAATGCAGACCCTGGACCAACTGTACCTTCCTTGG...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGCCAAGGAAGGTACAGTaGGTCCAGGGTCTGCATTTG +
Preference number: 5 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQPRKVQ*VQGLHL
Trigger: CAAATGCAGACCCTGGACCAACTGTACCTTCCTTGG...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATTACTGCTGCGAGTTaGAGGAGTGGCAGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCITAAS*RSGRGD
Trigger: GTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAAT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCCATCTTTGATCACTTGGATTGCTaGAGCCCAGGAGTTAGAGGC +
Preference number: 5 (lower is better)
Translates to: SRALSFQEPHVLFIFSIFDHLDC*SPGVRG
Trigger: GCCTCTAACTCCTGGGCTCAAGCAATCCAAGTGATC...AAAGATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCACAGCTACTCCGAAGGTaGAGGTGGGAGGATCACTTG +
Preference number: 5 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAQLLRR*RWEDHL
Trigger: CAAGTGATCCTCCCACCTCAACCTTCGGAGTAGCTG...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCCAGCTACTCCGAAGGTaGAGGTGGGAGGATCACTTG +
Preference number: 5 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCQLLRR*RWEDHL
Trigger: CAAGTGATCCTCCCACCTCAACCTTCGGAGTAGCTG...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGTCTTCAGCTGGGCATTaGTGGCCAGTAAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQSSAGH*WPVKSG
Trigger: CCCAGACTTTACTGGCCACAAATGCCCAGCTGAAGA...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGAAGCTGGGCGTGGCCTGCAGCTGTGATCCCAGCTACTCCGAAGGTTGAGGTGCTGCTTCAGTTCATTTaGTTTACACTTGTCACATAC +
Preference number: 5 (lower is better)
Translates to: GSWAWPAAVIPATPKVEVLLQFI*FTLVTY
Trigger: GTATGTGACAAGTGTAAACAAAATGAACTGAAGCAG...CACCTCAACCTTCGGAGTAGCTGGGATCACAGCTGCAGGCCACGCCCAGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATGCTTTGTCTCCTCTTCCAAAAGCGGGTTATGCAACTTGTGCCCAGCGCAGCCTCCTCTATCTCGGTCTaGCTGACCAATGAGAGCATC +
Preference number: 5 (lower is better)
Translates to: MLCLLFQKRVMQLVPSAASSISV*LTNESI
Trigger: GATGCTCTCATTGGTCAGCAAGACCGAGATAGAGGA...GGCTGCGCTGGGCACAAGTTGCATAACCCGCTTTTGGAAGAGGAGACAAAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCACTGGCAGGTTTCTGCTaGTTCTCAGGCTCGACACCA +
Preference number: 5 (lower is better)
Translates to: MTVNSHQRILLAVQLFPALAGFC*FSGSTP
Trigger: TGGTGTCGAGCCTGAGAACAAGCAGAAACCTGCCAG...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp ATGACTGAGATGGCTCCTGAGCCCAGGAATGAACAAGTGTCAGAGACAGGGAGGAAGTCTATACAGCCTTaGTTTCCTGGGCTACCCCTG +
Preference number: 5 (lower is better)
Translates to: MTEMAPEPRNEQVSETGRKSIQP*FPGLPL
Trigger: CAGGGGTAGCCCAGGAAACAAAGGCTGTATAGACTT...CCTCCCTGTCTCTGACACTTGTTCATTCCTGGGCTCAGGAGCCATCTCAGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCACCTGCAAGGCAAGGTTaGCACACTGTGTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAPARQG*HTVSLL
Trigger: CAACAAGGACACAGTGTGCAAACCTTGCCTTGCAGG...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCCCAAGGAAGGTACAGTaGGTCCAGGGTCTGCATTTG +
Preference number: 5 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCPRKVQ*VQGLHL
Trigger: CAAATGCAGACCCTGGACCAACTGTACCTTCCTTGG...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAACCAAGGAAGGTACAGTaGGTCCAGGGTCTGCATTTG +
Preference number: 5 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKPRKVQ*VQGLHL
Trigger: CAAATGCAGACCCTGGACCAACTGTACCTTCCTTGG...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATCTTCAGCTGGGCATTaGTGGCCAGTAAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: MTVNSHQRILLAVQLFPASSAGH*WPVKSG
Trigger: CCCAGACTTTACTGGCCACAAATGCCCAGCTGAAGA...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTGACAGACACCACCTaGATCTGGGTAGCACATATC +
Preference number: 5 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFLTDTT*IWVAHI
Trigger: GATATGTGCTACCCAGATCAAGGTGGTGTCTGTCAG...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGAGGGGCTCAGTGCAGTaGCAGCTTTCTGAACCCACT +
Preference number: 5 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKRGSVQ*QLSEPT
Trigger: AGTGGGTTCAGAAAGCTGCAACTGCACTGAGCCCCT...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS TCA 90 bp GCTGGCAGAGAAGAACTGCAAACCGCATCGGATTTCTCTGTCCCATaGTGTTCTACTCTCTTTCCAAGGAAGGTACAGTTGGTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: AGREELQTASDFSVP*CSTLFPRKVQLVQG
Trigger: ACCCTGGACCAACTGTACCTTCCTTGGAAAGAGAGTAGAACATCATGGGACAGAGAAATCCGATGCGGTTTGCAGTTCTTCTCTGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000587697.1
ENST00000616710.4
ENST00000617039.4
ENST00000639222.1
CDS TCA 90 bp TCTGACCCCAGCAGTGAGTTATGGAACCACGCTCAGAAAGGTAACTaGCTTGATGTCAGGCCACTAACACTGGTATGTGATGTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: SDPSSELWNHAQKGN*LDVRPLTLVCDVQV
Trigger: GACCTGGACATCACATACCAGTGTTAGTGGCCTGACATCAAGTCAGTTACCTTTCTGAGCGTGGTTCCATAACTCACTGCTGGGGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587697.1
CDS-3UTR CAA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTCAACTTTATTCTTCCTaGAACTTCCCGGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIQLYSS*NFPGPF
Trigger: GAAAGGGCCCGGGAAGTTCAAGGAAGAATAAAGTTG...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AGCCCACAGCAATGCACCAGACTCACATGCCATCAGAGACTGTCAAAGAGCAAACGAGGTCTCACTCCATaGCCCAGTTTGATCTCTAAC +
Preference number: 5 (lower is better)
Translates to: SPQQCTRLTCHQRLSKSKRGLTP*PSLISN
Trigger: GTTAGAGATCAAACTGGGCAATGGAGTGAGACCTCG...TTTGCTCTTTGACAGTCTCTGATGGCATGTGAGTCTGGTGCATTGCTGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp CTCCTCTTTGTTGAAACCTTGGGGGACATAGGATTGTTTTGCCGCAGTAGGCAGCCAAAGACAGCACCTTaGCTCAAGCTCACCCTTGTA +
Preference number: 5 (lower is better)
Translates to: LLFVETLGDIGLFCRSRQPKTAP*LKLTLV
Trigger: TACAAGGGTGAGCTTGAGCAAAGGTGCTGTCTTTGG...CTGCCTACTGCGGCAAAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATTCGGTCCTCCTCTTaGTTGAAACCTTGGGGGACA +
Preference number: 5 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCIRSSS*LKPWGT
Trigger: TGTCCCCCAAGGTTTCAACAAAGAGGAGGACCGAAT...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATTTCCTGGTTCACATTaGTTACAGCACCGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAFPGSH*LQHRPR
Trigger: TCTGGGACGGTGCTGTAACAAATGTGAACCAGGAAA...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATCACACTGTGTCCTTGTaGAGCTGCAACGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYHTVSL*SCNGCW
Trigger: CCAGCACCCGTTGCAGCTCAACAAGGACACAGTGTG...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp CCAAGAGCCTGGGTGAGAGCAAAAGCTTTCATTGACTCCAGTGCCCTCCTGAAGAATGGTTTCCTCCATTaGTATAACATCTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: PRAWVRAKAFIDSSALLKNGFLH*YNISLW
Trigger: CCACAGAGAGATGTTATACAAATGGAGGAAACCATT...CTTCAGGAGGGCACTGGAGTCAATGAAAGCTTTTGCTCTCACCCAGGCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GGCAGGAATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTAGAGTGTTTAGGGCTTaGAATGCTTTGTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GRNDGKFPPTDPPGCAVIRVFRA*NALSPL
Trigger: AAGAGGAGACAAAGCATTCAAAGCCCTAAACACTCT...AATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATTCCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTCTCTTTGTTGAAACCTaGGGGGACATAGGATTGTTT +
Preference number: 5 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFLFVET*GDIGLF
Trigger: AAACAATCCTATGTCCCCCAAGGTTTCAACAAAGAG...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp ATAAATTACAGAACTGTCCTGTGCTTCTCCACTGAAAATCCTAATCGACCGCTATTGCACACTGTGTCCTaGTTGAGCTGCAACGGGTGC +
Preference number: 5 (lower is better)
Translates to: INYRTVLCFSTENPNRPLLHTVS*LSCNGC
Trigger: GCACCCGTTGCAGCTCAACAAGGACACAGTGTGCAA...TAGCGGTCGATTAGGATTTTCAGTGGAGAAGCACAGGACAGTTCTGTAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATGTCCAGGGTCTGCATTaGTCCGTGGAGGAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDVQGLH*SVEEKA
Trigger: TGCCTTTTCCTCCACGGACAAATGCAGACCCTGGAC...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATACGATGATGTCGCCCTaGAAGTTCATCACCTGCCCG +
Preference number: 5 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDTMMSP*KFITCP
Trigger: CGGGCAGGTGATGAACTTCAAGGGCGACATCATCGT...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATATTACTGCTGCGAGTTaGAGGAGTGGCAGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYITAAS*RSGRGD
Trigger: GTCTCCCCTGCCACTCCTCAAACTCGCAGCAGTAAT...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGAGCGGGTTATGCAACTaGTGCCCAGCGCAGCCCACA +
Preference number: 5 (lower is better)
Translates to: ISRYFNIHCSILLISLGRSGLCN*CPAQPT
Trigger: TGTGGGCTGCGCTGGGCACAAGTTGCATAACCCGCT...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCGAAAGAACCCATATGTaGGTGAATAAACCGCAGTAC +
Preference number: 5 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCERTHM*VNKPQY
Trigger: GTACTGCGGTTTATTCACCAACATATGGGTTCTTTC...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp TCCTTGAACTTCCCGGGCCCTTTCTTTCCAGGAGCCCCATGTCCTGTTCATTTTTGGAGTTTTAGAAATTaGCTTACCAAGTACCTGAGT +
Preference number: 5 (lower is better)
Translates to: SLNFPGPFFPGAPCPVHFWSFRN*LTKYLS
Trigger: ACTCAGGTACTTGGTAAGCAAATTTCTAAAACTCCA...AAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGGAAGTTCAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp TGCTTCTCCACTGAAAATCCTAATCGACCGCTACCACCCCAGCATTTCCAGCAGTGGAGTTTTAGAAATTaGCTTACCAAGTACCTGAGT +
Preference number: 5 (lower is better)
Translates to: CFSTENPNRPLPPQHFQQWSFRN*LTKYLS
Trigger: ACTCAGGTACTTGGTAAGCAAATTTCTAAAACTCCA...CTGCTGGAAATGCTGGGGTGGTAGCGGTCGATTAGGATTTTCAGTGGAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCTGGAGTTTTAGAAATTaGCTTACCAAGTACCTGAGT +
Preference number: 5 (lower is better)
Translates to: NDGKFPPTDPPGCAVISCWSFRN*LTKYLS
Trigger: ACTCAGGTACTTGGTAAGCAAATTTCTAAAACTCCA...GCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATGACGGTAAATTCCCACCAACGGATCCTCCTGGCTGTGCAGTTATTTCCTGCATGGAGTTTTAGAAATTaGCTTACCAAGTACCTGAGT +
Preference number: 5 (lower is better)
Translates to: MTVNSHQRILLAVQLFPAWSFRN*LTKYLS
Trigger: ACTCAGGTACTTGGTAAGCAAATTTCTAAAACTCCA...TGCAGGAAATAACTGCACAGCCAGGAGGATCCGTTGGTGGGAATTTACCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGGTGGGCAGCAGAGCTaGGTTATAGTTACGTGGTCC +
Preference number: 5 (lower is better)
Translates to: RYFNIHCSILLISLGRETGGQQS*VIVTWS
Trigger: GGACCACGTAACTATAACCAAGCTCTGCTGCCCACC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GTCATGAACCAGGTCTGCCTGCAAAACGTCTGCATTTTCTATCACACAGGGAAGACTCTACACGACAAATaGGAAAAGGTGAAACTATGG +
Preference number: 5 (lower is better)
Translates to: VMNQVCLQNVCIFYHTGKTLHDK*EKVKLW
Trigger: CCATAGTTTCACCTTTTCCAATTTGTCGTGTAGAGT...CTTCCCTGTGTGATAGAAAATGCAGACGTTTTGCAGGCAGACCTGGTTCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTCCTGCAAGGCAAGGTTaGCACACTGTGTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RYFNIHCSILLISLGRETPARQG*HTVSLL
Trigger: CAACAAGGACACAGTGTGCAAACCTTGCCTTGCAGG...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATTGGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATAGGGCTTTGAATGCTTaGTCTCCTCTTCCAAAAGCG +
Preference number: 5 (lower is better)
Translates to: IGKWNVFHFYKANPQMHDRALNA*SPLPKA
Trigger: CGCTTTTGGAAGAGGAGACAAAGCATTCAAAGCCCT...ATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGACTGCCAGTGAGTGCTaGGTTGTCTCTCATCTCACG +
Preference number: 5 (lower is better)
Translates to: ISRYFNIHCSILLISLGRTASEC*VVSHLT
Trigger: CGTGAGATGAGAGACAACCAAGCACTCACTGGCAGT...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAAGTGTCACCAGCTCCTaGGTTAGTACGAAGATCTGG +
Preference number: 5 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTSVTSS*VSTKIW
Trigger: CCAGATCTTCGTACTAACCAAGGAGCTGGTGACACT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACATTTCCTGGTTCACATTaGTTACAGCACCGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTFPGSH*LQHRPR
Trigger: TCTGGGACGGTGCTGTAACAAATGTGAACCAGGAAA...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACACAACTTTATTCTTCCTaGAACTTCCCGGGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTQLYSS*NFPGPF
Trigger: GAAAGGGCCCGGGAAGTTCAAGGAAGAATAAAGTTG...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTACGGCCACAAGCCTCATaGATCCAGTGCCACAAATTA +
Preference number: 5 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVRPQAS*IQCHKL
Trigger: TAATTTGTGGCACTGGATCAATGAGGCTTGTGGCCG...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp AATATTAGTACCTTCTGCTTACGCATGTTGAAAACAAGGCTAAGAAGTGATGTACCAGTGAGTGCTTGGTaGTCTCTCATCTCACGTCAT +
Preference number: 5 (lower is better)
Translates to: NISTFCLRMLKTRLRSDVPVSAW*SLISRH
Trigger: ATGACGTGAGATGAGAGACAACCAAGCACTCACTGG...TACATCACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAAGGTACTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GGAAAATGGAATGTTTTCCACTTCTACAAGGCTAACCCACAGATGCACGATTATCTGCTTCAGTTCATTTaGTTTACACTTGTCACATAC +
Preference number: 5 (lower is better)
Translates to: GKWNVFHFYKANPQMHDYLLQFI*FTLVTY
Trigger: GTATGTGACAAGTGTAAACAAAATGAACTGAAGCAG...ATAATCGTGCATCTGTGGGTTAGCCTTGTAGAAGTGGAAAACATTCCATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAACTGTCCACCTCTTTTaGCAAGTAGTTTTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTTVHLF*QVVFRG
Trigger: TCCTCTGAAAACTACTTGCAAAAAGAGGTGGACAGT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTTGCTCAAGCTCACCCTaGTATAATCGTAACAAGAGT +
Preference number: 5 (lower is better)
Translates to: RYFNIHCSILLISLGRETCSSSP*YNRNKS
Trigger: ACTCTTGTTACGATTATACAAGGGTGAGCTTGAGCA...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAAATGGTTTCCTCCATTaGTATAACATCTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTNGFLH*YNISLW
Trigger: CCACAGAGAGATGTTATACAAATGGAGGAAACCATT...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTTTCTGCTTACGCATGTaGAAAACAAGGCTAAGAAGT +
Preference number: 5 (lower is better)
Translates to: RYFNIHCSILLISLGRETFCLRM*KTRLRS
Trigger: ACTTCTTAGCCTTGTTTTCAACATGCGTAAGCAGAA...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS-3UTR CAA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTCTGCTTCAGTTCATTTaGTTTACACTTGTCACATAC +
Preference number: 5 (lower is better)
Translates to: RYFNIHCSILLISLGRETLLQFI*FTLVTY
Trigger: GTATGTGACAAGTGTAAACAAAATGAACTGAAGCAG...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGATACAAATGAACGGTaGACACCATACCATAAAGAT +
Preference number: 5 (lower is better)
Translates to: RYFNIHCSILLISLGRETDTNER*TPYHKD
Trigger: ATCTTTATGGTATGGTGTCAACCGTTCATTTGTATC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp ATCTCAAGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGATACAAATGAACGGTaGACACCATACCATAAAGAT +
Preference number: 5 (lower is better)
Translates to: ISRYFNIHCSILLISLGRDTNER*TPYHKD
Trigger: ATCTTTATGGTATGGTGTCAACCGTTCATTTGTATC...CCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCTTGAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp GCTTCAGTTCATTTTGTTTACACTTGTCACATACATCTCTACAGTACACAGACAGATACAAATGAACGGTaGACACCATACCATAAAGAT +
Preference number: 5 (lower is better)
Translates to: ASVHFVYTCHIHLYSTQTDTNER*TPYHKD
Trigger: ATCTTTATGGTATGGTGTCAACCGTTCATTTGTATC...TGTCTGTGTACTGTAGAGATGTATGTGACAAGTGTAAACAAAATGAACTGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
CDS-3UTR CAA 90 bp AGGTACTTTAACATTCACTGTAGCATACTTCTAATATCTCTGGGTAGGGAAACTGCTCTGGAAAGAATTTaGACACAGCACTTAAATATG +
Preference number: 5 (lower is better)
Translates to: RYFNIHCSILLISLGRETALERI*TQHLNM
Trigger: CATATTTAAGTGCTGTGTCAAAATTCTTTCCAGAGC...AGTTTCCCTACCCAGAGATATTAGAAGTATGCTACAGTGAATGTTAAAGTACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS CAA 90 bp AGCTGCAACGGGTGCTGGGCGCCCAGGCCCGGCGCGCACTCGGTGTaGCGGCGGCAGCACTCGCAGTCCTGGCTCCAGTGGTACCCAGCC +
Preference number: 6 (lower is better)
Translates to: SCNGCWAPRPGAHSV*RRQHSQSWLQWYPA
Trigger: GGCTGGGTACCACTGGAGCCAGGACTGCGAGTGCTGCCGCCGCAACACCGAGTGCGCGCCGGGCCTGGGCGCCCAGCACCCGTTGCAGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
ENST00000639222.1
CDS CCA 72 bp GCGCACTCGGTGTTGCGGCGGCAGCACTCGCAGTCCTaGCTCCAGTGGTACCCAGCCGTGCACGCGCAGCGC +
Preference number: 6 (lower is better)
Translates to: AHSVLRRQHSQS*LQWYPAVHAQR
Trigger: GCGCTGCGCGTGCACGGCTGGGTACCACTGGAGCCAGGACTGCGAGTGCTGCCGCCGCAACACCGAGTGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
ENST00000639222.1
CDS CAA 90 bp GGCCACCAGGGGAGCTTCCAGACCCGGCACCTGCCCTCGCTGAGCTaGGGAGCCTCCCATCAGCCCCATCCTCGGGCTGGTCTCTGGCCT +
Preference number: 6 (lower is better)
Translates to: GHQGSFQTRHLPSLS*GASHQPHPRAGLWP
Trigger: AGGCCAGAGACCAGCCCGAGGATGGGGCTGATGGGAGGCTCCCAAGCTCAGCGAGGGCAGGTGCCGGGTCTGGAAGCTCCCCTGGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS TCA 72 bp ACCAGGGGAGCTTCCAGACCCGGCACCTGCCCTCGCTaGGCTTGGGAGCCTCCCATCAGCCCCATCCTCGGG +
Preference number: 6 (lower is better)
Translates to: TRGASRPGTCPR*AWEPPISPILG
Trigger: CCCGAGGATGGGGCTGATGGGAGGCTCCCAAGCTCAGCGAGGGCAGGTGCCGGGTCTGGAAGCTCCCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS GCA 72 bp TGCACCCCCGGCTGGAGGCCACGTCCCTCTAGGCTCTaGCTCCATGCTGGGGCTGCACGAACTGCTCAGGCC +
Preference number: 6 (lower is better)
Translates to: CTPGWRPRPSRL*LHAGAARTAQA
Trigger: GGCCTGAGCAGTTCGTGCAGCCCCAGCATGGAGGCAGAGCCTAGAGGGACGTGGCCTCCAGCCGGGGGTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592013.1
CDS GCA 72 bp CAGCCCCATCCTCGGGCTGGTCTCTGGCCTCCGTCCTaGTGGCTTCTTCTTCAGGGGGAAGGCCCATGCCAT +
Preference number: 6 (lower is better)
Translates to: QPHPRAGLWPPS*WLLLQGEGPCH
Trigger: ATGGCATGGGCCTTCCCCCTGAAGAAGAAGCCAGCAGGACGGAGGCCAGAGACCAGCCCGAGGATGGGGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS GCA 72 bp CCAGCCTTCAGGGTGAAATCCAGTGCTTCTCCAATGTaGGCAGAATCACCTGCAGCCGGGCGAGCAGCGCGC +
Preference number: 6 (lower is better)
Translates to: PAFRVKSSASPM*AESPAAGRAAR
Trigger: GCGCGCTGCTCGCCCGGCTGCAGGTGATTCTGCGCACATTGGAGAAGCACTGGATTTCACCCTGAAGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592013.1
CDS CCA 72 bp TTACTGTTTCCAGTCACATTTCCAGATGCAGGGGACTaGCCACCAGGGGAGCTTCCAGACCCGGCACCTGCC +
Preference number: 6 (lower is better)
Translates to: LLFPVTFPDAGD*PPGELPDPAPA
Trigger: GGCAGGTGCCGGGTCTGGAAGCTCCCCTGGTGGCCAGTCCCCTGCATCTGGAAATGTGACTGGAAACAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS TCA 72 bp AGTCCTGCACAGGGGCTCAGTGCAGTTGCAGCTTTCTaGACCCACTGTGCTCTGTGTCCCCGTGAAGCACTG +
Preference number: 6 (lower is better)
Translates to: SPAQGLSAVAAF*THCALCPREAL
Trigger: CAGTGCTTCACGGGGACACAGAGCACAGTGGGTTCAGAAAGCTGCAACTGCACTGAGCCCCTGTGCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS GCA 72 bp GAGTCCAATCAGTCCTGCACAGGGGCTCAGTGCAGTTaGAGCTTTCTGAACCCACTGTGCTCTGTGTCCCCG +
Preference number: 6 (lower is better)
Translates to: ESNQSCTGAQCS*SFLNPLCSVSP
Trigger: CGGGGACACAGAGCACAGTGGGTTCAGAAAGCTGCAACTGCACTGAGCCCCTGTGCAGGACTGATTGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS CCA 72 bp CCGTCCCAGATGCTCATAATGCTTCTCACTGGTACATaGAGGAGCGATCTGCAAAGCCACCTGCAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: PSQMLIMLLTGT*RSDLQSHLQPG
Trigger: GCCCGGCTGCAGGTGGCTTTGCAGATCGCTCCTCCATGTACCAGTGAGAAGCATTATGAGCATCTGGGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
ENST00000639222.1
CDS TCA 72 bp GCTGCCCTCCCTTCCTTCACTGCCCAGCCTTCAGGGTaGAATCCAGTGCTTCTCCAATGTGCGCAGAATCAC +
Preference number: 6 (lower is better)
Translates to: AALPSFTAQPSG*NPVLLQCAQNH
Trigger: GTGATTCTGCGCACATTGGAGAAGCACTGGATTTCACCCTGAAGGCTGGGCAGTGAAGGAAGGGAGGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592013.1
CDS GCA 72 bp CTTCGCCTTGTGCGTAGGGACCACCTCCTACACATGTaGCCTGACAGACACCACCTTGATCTGGGTAGCACA +
Preference number: 6 (lower is better)
Translates to: LRLVRRDHLLHM*PDRHHLDLGST
Trigger: TGTGCTACCCAGATCAAGGTGGTGTCTGTCAGGGCACATGTGTAGGAGGTGGTCCCTACGCACAAGGCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS CCA 72 bp CCAGGCTCAGTGAGGAACAGTAACTGGTCTGTGGGCTaGGAGGGCCTGTCCATGTATTCATCTTCTGTGGGC +
Preference number: 6 (lower is better)
Translates to: PGSVRNSNWSVG*EGLSMYSSSVG
Trigger: GCCCACAGAAGATGAATACATGGACAGGCCCTCCCAGCCCACAGACCAGTTACTGTTCCTCACTGAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS CCA 72 bp TCTCTTCTTTTCCGTAGTAGAAGCCAACAAGCCCTGTaGTCACTTCTGAGAGTGCACCCCCGGCTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: SLLFRSRSQQAL*SLLRVHPRLEA
Trigger: GGCCTCCAGCCGGGGGTGCACTCTCAGAAGTGACCACAGGGCTTGTTGGCTTCTACTACGGAAAAGAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592013.1
CDS TCA 72 bp GAAGCTGTCTTCCTCTATCTCGGTCTTGCTGACCAATaGGAGCATCCTGGCATCTTCGCCTTGTGCGTAGGG +
Preference number: 6 (lower is better)
Translates to: EAVFLYLGLADQ*EHPGIFALCVG
Trigger: CCCTACGCACAAGGCGAAGATGCCAGGATGCTCTCATTGGTCAGCAAGACCGAGATAGAGGAAGACAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS CCA 72 bp TACAGCACCGTCCCAGATGCTCATAATGCTTCTCACTaGTACATGGAGGAGCGATCTGCAAAGCCACCTGCA +
Preference number: 6 (lower is better)
Translates to: YSTVPDAHNASH*YMEERSAKPPA
Trigger: TGCAGGTGGCTTTGCAGATCGCTCCTCCATGTACCAGTGAGAAGCATTATGAGCATCTGGGACGGTGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
ENST00000639222.1
CDS TCA 72 bp ATGCTCCCTGCTGACCAAAGTTTGCCGTGTGTGTACTaGCACAACTGTCACCTGAGGACTCCTTATCTCCAC +
Preference number: 6 (lower is better)
Translates to: MLPADQSLPCVY*HNCHLRTPYLH
Trigger: GTGGAGATAAGGAGTCCTCAGGTGACAGTTGTGTCAGTACACACACGGCAAACTTTGGTCAGCAGGGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS CAA 72 bp GACTCCTTATCTCCACTTAGGCGGCCACAAGCCTCATaGATCCAGTGCCACAAATTAGCTGTGAGTGCTTTC +
Preference number: 6 (lower is better)
Translates to: DSLSPLRRPQAS*IQCHKLAVSAF
Trigger: GAAAGCACTCACAGCTAATTTGTGGCACTGGATCAATGAGGCTTGTGGCCGCCTAAGTGGAGATAAGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS CAA 72 bp ACCACCTCCTACACATGTGCCCTGACAGACACCACCTaGATCTGGGTAGCACATATCTTCTGGAAATGTCTT +
Preference number: 6 (lower is better)
Translates to: TTSYTCALTDTT*IWVAHIFWKCL
Trigger: AAGACATTTCCAGAAGATATGTGCTACCCAGATCAAGGTGGTGTCTGTCAGGGCACATGTGTAGGAGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586569.3
CDS CAA 72 bp CTTTCCTTATCTCCACTTAGGCGGCCACAAGCCTCATaGATCCAGTGCCACAAATTAGCTGTGAGTGCTTTC +
Preference number: 6 (lower is better)
Translates to: LSLSPLRRPQAS*IQCHKLAVSAF
Trigger: GAAAGCACTCACAGCTAATTTGTGGCACTGGATCAATGAGGCTTGTGGCCGCCTAAGTGGAGATAAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639222.1
CDS CAA 90 bp AAGGGCAAGGCCGGTTGTTTCCTCAATACAGTAATTAGGATGGCTTaGACTTGTCCTTATGTTACGATGCACCCCTATTTCCACAGGCTC +
Preference number: 6 (lower is better)
Translates to: KGKAGCFLNTVIRMA*TCPYVTMHPYFHRL
Trigger: GAGCCTGTGGAAATAGGGGTGCATCGTAACATAAGGACAAGTCAAAGCCATCCTAATTACTGTATTGAGGAAACAACCGGCCTTGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592013.1
CDS TCA 72 bp TATGTTACGATGCACCCCTATTTCCACAGGCTCCAGTaGATGCCCCTTTATTCTCCCAGTGTGAAAGCCTTT +
Preference number: 6 (lower is better)
Translates to: YVTMHPYFHRLQ*MPLYSPSVKAF
Trigger: AAAGGCTTTCACACTGGGAGAATAAAGGGGCATTCACTGGAGCCTGTGGAAATAGGGGTGCATCGTAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592013.1
CDS CAA 72 bp ATTTCCTTATCTCCACTTAGGCGGCCACAAGCCTCATaGATCCAGTGCCACAAATTAGCTGTGAGTGCTTTC +
Preference number: 6 (lower is better)
Translates to: ISLSPLRRPQAS*IQCHKLAVSAF
Trigger: GAAAGCACTCACAGCTAATTTGTGGCACTGGATCAATGAGGCTTGTGGCCGCCTAAGTGGAGATAAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616710.4
CDS TCA 72 bp GAAGAACTGCAAACCGCATCGGATTTCTCTGTCCCATaGTGTTCTACTCTCTTTCCAAGGAAGGTACAGTTG +
Preference number: 6 (lower is better)
Translates to: EELQTASDFSVP*CSTLFPRKVQL
Trigger: CAACTGTACCTTCCTTGGAAAGAGAGTAGAACATCATGGGACAGAGAAATCCGATGCGGTTTGCAGTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269485.11
ENST00000586569.3
ENST00000587697.1
ENST00000616710.4
ENST00000617039.4
ENST00000639222.1
CDS TCA 72 bp AGCAGTGAGTTATGGAACCACGCTCAGAAAGGTAACTaGCTTGATGTCAGGCCACTAACACTGGTATGTGAT +
Preference number: 6 (lower is better)
Translates to: SSELWNHAQKGN*LDVRPLTLVCD
Trigger: ATCACATACCAGTGTTAGTGGCCTGACATCAAGTCAGTTACCTTTCTGAGCGTGGTTCCATAACTCACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587697.1
CDS CCA 72 bp CAAGTAAACATGGGGTTCATTTGGTGGTTTTCTAGCTaGCAGAGAAGAACTGCAAACCGCATCGGATTTCTC +
Preference number: 6 (lower is better)
Translates to: QVNMGFIWWFSS*QRRTANRIGFL
Trigger: GAGAAATCCGATGCGGTTTGCAGTTCTTCTCTGCCAGCTAGAAAACCACCAAATGAACCCCATGTTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586569.3
ENST00000616710.4
ENST00000617039.4
ENST00000639222.1