Pregenerated sensors for TNFRSF10D (Homo sapiens)
Ensembl gene IDs: ENSG00000173530Ensembl transcript IDs: ENST00000312584.4
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCATGAGCCACCGCATGTaGCCTAAAACGACCCTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SNINVSLIKVGVSPNNPIMSHRM*PKTTLN Trigger: ATTAAGGGTCGTTTTAGGCCACATGCGGTGGCTCAT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGGACCATTGGTAAGCTaGCCCATATTGGATAGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SNINVSLIKVGVSPNNPIGPLVS*PILDSR Trigger: TCTACTATCCAATATGGGGCAGCTTACCAATGGTCC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| 3UTR-3UTR TCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCATGCAGCCAAGAATCTaGTATAAATTTCTCCCGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SNINVSLIKVGVSPNNPIMQPRI*YKFLPF Trigger: AAACGGGAGAAATTTATATCAGATTCTTGGCTGCAT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCCGCTGTCCTGGCTCCTaGATAGCGCCCTGCTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIRCPGS*IAPCSS Trigger: GCTCGAGCAGGGCGCTATCCAGGAGCCAGGACAGCG...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCCGTCCTGCCGGGGGATaGTGGCAGAGTCAACCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIRPAGG*WQSQPG Trigger: TCCGGGTTGACTCTGCCACCATCCCCCGGCAGGACG...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCTTCCCGACGCTGTCCTaGCTCCTGGATAGCGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIFPTLS*LLDSAL Trigger: CAGGGCGCTATCCAGGAGCCAGGACAGCGTCGGGAA...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGGGGTCCAGGAGCCATaGTCTGGTTCCCGACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIGVQEP*SGSRRC Trigger: ACAGCGTCGGGAACCAGACCATGGCTCCTGGACCCC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR TCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCCATCCAGCAAGGTGCTaGTGTCAGCGGAGTCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIHPARC*CQRSQR Trigger: ACGCTGACTCCGCTGACATCAGCACCTTGCTGGATG...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR GCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCCGTCCCCGTAGTTTGTaGGCGTGCAAAGGTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIRPRSL*ACKGSR Trigger: GCGAGAACCTTTGCACGCGCACAAACTACGGGGACG...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR GCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCCACTGTCTCCTCCGCTaGTGGGGTTTTCCCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIHCLLR*WGFPSG Trigger: TCCACTGGGAAAACCCCAGCAGCGGAGGAGACAGTG...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCCAAGCATCCCCAGGATaGTGGTCACTGTCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIQASPG*WSLSPP Trigger: CGGAGGAGACAGTGACCACCATCCTGGGGATGCTTG...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGAGCTGGGACCGGACTaGCTCTCTCTGAGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIELGPD*LSLSFE Trigger: CTCAAAGCTCAGAGAGAGCCAGTCCGGTCCCAGCTC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR TCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCACCTCCTCCACCACCTaGGCAGATGCCTTTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPITSSTT*ADAFEV Trigger: TACCTCAAAGGCATCTGCTCAGGTGGTGGAGGAGGT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR TCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCAGACAAGCTGCCCCTTaGGAAGCTGCCAGCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIRQAAP*EAASHQ Trigger: TTGATGGCTGGCAGCTTCTCAAGGGGCAGCTTGTCT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR TCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCCGGACTGGCTCTCTCTaGGCTTTGAGACCAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIRTGSL*ALRPSL Trigger: GAGACTTGGTCTCAAAGCTCAGAGAGAGCCAGTCCG...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR GCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCCGGAAAAGGACTCTGTaGACACGTTCGGGACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIRKRTL*TRSGPP Trigger: AGGAGGTCCCGAACGTGTGCACAGAGTCCTTTTCCG...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR GCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCACACCCTTCAGCTTCTaGCTGTTCCAGCAGACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPITPFSF*LFQQTL Trigger: CAGCGTCTGCTGGAACAGGCAGAAGCTGAAGGGTGT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCTGTCTCCTCCGCTGCTaGGGTTTTCCCAGTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPICLLRC*GFPSGT Trigger: AGTTCCACTGGGAAAACCCCAGCAGCGGAGGAGACA...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCACGCTGTGGCTCCTCTaGCAACTCTACAGTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPITLWLL*QLYSHT Trigger: GGTGTGACTGTAGAGTTGCCAGAGGAGCCACAGCGT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCTTCCAGCAGACGCTGTaGCTCCTCTGGCAACTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIFQQTL*LLWQLY Trigger: GTAGAGTTGCCAGAGGAGCCACAGCGTCTGCTGGAA...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR TCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGCTCTCTCTGAGCTTTaGGACCAAGTCTCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIALSEL*DQVSCT Trigger: TGTGCAGGAGACTTGGTCTCAAAGCTCAGAGAGAGC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR GCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCCGTAGTTTGTGCGCGTaGAAAGGTTCTCGCAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIRSLCA*KGSRSY Trigger: GTAGCTGCGAGAACCTTTGCACGCGCACAAACTACG...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR GCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCTGTGTCATCCAGAAGTaGAGGGGACAAGGTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPICVIQK*RGQGVG Trigger: TCCCACACCTTGTCCCCTGCACTTCTGGATGACACA...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGCTCAGAGACCTGGGTaGGCTGCAAGTATCTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIAQRPG*AASICY Trigger: GTAACAGATACTTGCAGCCCACCCAGGTCTCTGAGC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR GCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCACAAGTAAGACAAGCTaGCCCTTGAGAAGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPITSKTS*PLRSCQ Trigger: CTGGCAGCTTCTCAAGGGGCAGCTTGTCTTACTTGT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGAGAAGGGAGGAGGGTaGATCGAAAGCGCCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIEKGGG*IESAKN Trigger: ATTTTTGGCGCTTTCGATCCACCCTCCTCCCTTCTC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGACACACGGTGTCTCTaGTCGTGGTACAGGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIDTRCL*SWYRNF Trigger: AAAGTTCCTGTACCACGACCAGAGACACCGTGTGTC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR TCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCATTCATTTTTGCACTTaGTGTCACTCCGGGGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIIHFCT*CHSGAY Trigger: GTACGCCCCGGAGTGACATCAAGTGCAAAAATGAAT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR TCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCAACTGTAATGGCGCTTaGAAGAGAAGCTCTTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPINCNGA*KRSSSQ Trigger: CTGCGAAGAGCTTCTCTTTCAAGCGCCATTACAGTT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR TCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGTATATTCTGATCTATaGGATCCTGCTGGACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIVYSDL*DPAGHS Trigger: GGAGTGTCCAGCAGGATCTCATAGATCAGAATATAC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR TCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGAATTTCTTCCGACATaGAAAGCCAACCACAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIEFLPT*KANHNH Trigger: GTGGTTGTGGTTGGCTTTTCATGTCGGAAGAAATTC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR TCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCATGGACACAACAATCTaGATGTGCGAACTTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIMDTTI*MCELQA Trigger: TGCCTGAAGTTCGCACATTCAGATTGTTGTGTCCAT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCTTTTCCCAGTGGAACTaGCAGCTGATTCATTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIFSQWN*QLIHFC Trigger: GCAAAAATGAATCAGCTGCCAGTTCCACTGGGAAAA...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGTGTTATGTGCTATTTaGCCCGGGTATAAAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SNINVSLIKVGVSPNNPIVLCAI*PGYKAK Trigger: TTTTGCTTTATACCCGGGCCAAATAGCACATAACAC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS TCA 90 bp | CTCGAGCGCTCGAGGCGGTCGGGACGCTTTGTCCCCAAAGTCCCATaGGAAGGGAGGAGGGTGGATCGAAAGCGCCAAAAATCAATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LERSRRSGRFVPKVP*EGRRVDRKRQKSIR Trigger: TCTGATTGATTTTTGGCGCTTTCGATCCACCCTCCTCCCTTCTCATGGGACTTTGGGGACAAAGCGTCCCGACCGCCTCGAGCGCTCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CAA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGGCGGTCGGGACGCTTaGTCCCCAAAGTCCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SNINVSLIKVGVSPNNPIGGRDA*SPKSHE Trigger: CTCATGGGACTTTGGGGACAAAGCGTCCCGACCGCC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CAA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGTCTCGTTGCGGGCATaGTCCTCCGCCCCAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SNINVSLIKVGVSPNNPIVSLRA*SSAPGT Trigger: AGTTCCTGGGGCGGAGGACAATGCCCGCAACGAGAC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CAA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGTCCTTCTTCCAGTGTaGCCGAGGCATCCAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SNINVSLIKVGVSPNNPIVLLPV*PRHPAR Trigger: CCTTGCTGGATGCCTCGGCAACACTGGAAGAAGGAC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CAA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCAATCGTCCCCGTAGTTaGTGCGCGTGCAAAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SNINVSLIKVGVSPNNPINRPRS*CACKGS Trigger: AGAACCTTTGCACGCGCACAAACTACGGGGACGATT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CAA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCACGAACTTAAGGATCTaGGGGTCCAGGAGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SNINVSLIKVGVSPNNPITNLRI*GSRSHG Trigger: ACCATGGCTCCTGGACCCCAAGATCCTTAAGTTCGT...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CAA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGATTCATTTTTGCACTaGATGTCACTCCGGGGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: SNINVSLIKVGVSPNNPIDSFLH*MSLRGV Trigger: TACGCCCCGGAGTGACATCAAGTGCAAAAATGAATC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS-3UTR CAA 90 bp | AGCAATATAAATGTTTCTCTAATTAAGGTGGGGGTAAGCCCCAATAATCCTATCGCAGCTGATTCATTTTaGCACTTGATGTCACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SNINVSLIKVGVSPNNPIAADSF*HLMSLR Trigger: CCGGAGTGACATCAAGTGCAAAAATGAATCAGCTGC...GATAGGATTATTGGGGCTTACCCCCACCTTAATTAGAGAAACATTTATATTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS CAA 72 bp | GCGCCCTGCTCGAGCGCTCGAGGCGGTCGGGACGCTTaGTCCCCAAAGTCCCATGAGAAGGGAGGAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: APCSSARGGRDA*SPKSHEKGGGW Trigger: CCACCCTCCTCCCTTCTCATGGGACTTTGGGGACAAAGCGTCCCGACCGCCTCGAGCGCTCGAGCAGGGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS CAA 90 bp | TCCTGGATAGCGCCCTGCTCGAGCGCTCGAGGCGGTCGGGACGCTTaGTCCCCAAAGTCCCATGAGAAGGGAGGAGGGTGGATCGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SWIAPCSSARGGRDA*SPKSHEKGGGWIES Trigger: GCTTTCGATCCACCCTCCTCCCTTCTCATGGGACTTTGGGGACAAAGCGTCCCGACCGCCTCGAGCGCTCGAGCAGGGCGCTATCCAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS TCA 72 bp | TCGAGGCGGTCGGGACGCTTTGTCCCCAAAGTCCCATaGGAAGGGAGGAGGGTGGATCGAAAGCGCCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SRRSGRFVPKVP*EGRRVDRKRQK Trigger: TTTTTGGCGCTTTCGATCCACCCTCCTCCCTTCTCATGGGACTTTGGGGACAAAGCGTCCCGACCGCCTCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||
| CDS CCA 72 bp | GCTTTGTCCCCAAAGTCCCATGAGAAGGGAGGAGGGTaGATCGAAAGCGCCAAAAATCAATCAGAAATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: ALSPKSHEKGGG*IESAKNQSEIV Trigger: GACGATTTCTGATTGATTTTTGGCGCTTTCGATCCACCCTCCTCCCTTCTCATGGGACTTTGGGGACAAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312584.4 |
||