Pregenerated sensors for TNFRSF10C (Homo sapiens)
Ensembl gene IDs: ENSG00000173535Ensembl transcript IDs: ENST00000356864.4, ENST00000517558.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATaGTCCCTACGATGGTGCATGAGAGGTAATGAGAAGAGGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: VKSFKQTQSEAQLEL*SLRWCMRGNEKRQE Trigger: CTCCTGCCTCTTCTCATTACCTCTCATGCACCATCGTAGGGATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| 3UTR-3UTR GCA 90 bp | GCATTGGCACCAAATTCTTCAACACACTGGATATCATCCCAGGACGTACAATTATTTCATTCCGGAAGGTaGCTTCTTTACACTGACACA | + |
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Preference number: 2 (lower is better) Translates to: ALAPNSSTHWISSQDVQLFHSGR*LLYTDT Trigger: TGTGTCAGTGTAAAGAAGGCACCTTCCGGAATGAAA...TAATTGTACGTCCTGGGATGATATCCAGTGTGTTGAAGAATTTGGTGCCAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| 3UTR-3UTR CCA 90 bp | CACAGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCCTGGGGTTTCCACAGTaGCATTGGCACCAAATTCTT | + |
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Preference number: 2 (lower is better) Translates to: HSEVFQTNTIRSTIRTMILGFPQ*HWHQIL Trigger: AAGAATTTGGTGCCAATGCCACTGTGGAAACCCCAG...GATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| 3UTR-3UTR CCA 90 bp | CACAGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCAATTCTTCAACACACTaGATATCATCCCAGGACGTA | + |
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Preference number: 2 (lower is better) Translates to: HSEVFQTNTIRSTIRTMINSSTH*ISSQDV Trigger: TACGTCCTGGGATGATATCCAGTGTGTTGAAGAATT...GATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| 3UTR-3UTR CAA 90 bp | AGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCCCTCGTACAATTACTGACTaGGACTTCCCCACTAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: SEVFQTNTIRSTIRTMIPRTITD*DFPTRA Trigger: TGCCCTAGTGGGGAAGTCCAAGTCAGTAATTGTACG...AGGGATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR GCA 90 bp | CAATTACTGACTTGGACTTCCCCACTAGGGCACCTGCTACACTTCCGGCACATCTCCTGGGTCGCACCCTaGCTCGGCCATCAGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: QLLTWTSPLGHLLHFRHISWVAP*LGHQAA Trigger: GGCCGCCTGATGGCCGAGGCAGGGTGCGACCCAGGA...GATGTGCCGGAAGTGTAGCAGGTGCCCTAGTGGGGAAGTCCAAGTCAGTAATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | CATTGGCACCAAATTCTTCAACACACTGGATATCATCCCAGGACGTACAATTACCGCCGTCCTGGGTCCTaGGTCGCACCCTGCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: HWHQILQHTGYHPRTYNYRRPGS*VAPCLG Trigger: GCCGAGGCAGGGTGCGACCCAGGACCCAGGACGGCG...GTAATTGTACGTCCTGGGATGATATCCAGTGTGTTGAAGAATTTGGTGCCAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | CTGGATATCATCCCAGGACGTACAATTACTGACTTGGACTTCCCCACTAGGGCACTGAGTTCGTGCGCGTaGAGAGGTTCCCACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LDIIPGRTITDLDFPTRALSSCA*RGSHSC Trigger: GCAGCTGTGGGAACCTCTCCACGCGCACGAACTCAG...TGCCCTAGTGGGGAAGTCCAAGTCAGTAATTGTACGTCCTGGGATGATATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | CATTGGCACCAAATTCTTCAACACACTGGATATCATCCCAGGACGTACAATTACTTCCCGACGCCGTCCTaGGTCCTGGGTCGCACCCTG | + |
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Preference number: 4 (lower is better) Translates to: HWHQILQHTGYHPRTYNYFPTPS*VLGRTL Trigger: CAGGGTGCGACCCAGGACCCAGGACGGCGTCGGGAA...GTAATTGTACGTCCTGGGATGATATCCAGTGTGTTGAAGAATTTGGTGCCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | CAATTACTGACTTGGACTTCCCCACTAGGGCACCTGCTACACTTCCGGCACATCCTGGGGTTTCCACAGTaGCATTGGCACCAAATTCTT | + |
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Preference number: 4 (lower is better) Translates to: QLLTWTSPLGHLLHFRHILGFPQ*HWHQIL Trigger: AAGAATTTGGTGCCAATGCCACTGTGGAAACCCCAG...GATGTGCCGGAAGTGTAGCAGGTGCCCTAGTGGGGAAGTCCAAGTCAGTAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR TCA 90 bp | CAATTACTGACTTGGACTTCCCCACTAGGGCACCTGCTACACTTCCGGCACATCGCACAATTAGAACTATaGTCCCTACGATGGTGCATG | + |
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Preference number: 4 (lower is better) Translates to: QLLTWTSPLGHLLHFRHIAQLEL*SLRWCM Trigger: CATGCACCATCGTAGGGATCATAGTTCTAATTGTGC...GATGTGCCGGAAGTGTAGCAGGTGCCCTAGTGGGGAAGTCCAAGTCAGTAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR GCA 90 bp | GCATTGGCACCAAATTCTTCAACACACTGGATATCATCCCAGGACGTACAATTACGTTGGCTGAGTTCGTaGGCGTGGAGAGGTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ALAPNSSTHWISSQDVQLRWLSS*AWRGSH Trigger: GTGGGAACCTCTCCACGCGCACGAACTCAGCCAACG...TAATTGTACGTCCTGGGATGATATCCAGTGTGTTGAAGAATTTGGTGCCAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR TCA 90 bp | CATTGGCACCAAATTCTTCAACACACTGGATATCATCCCAGGACGTACAATTACTCAGAAATCGTTGGCTaGGTTCGTGCGCGTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: HWHQILQHTGYHPRTYNYSEIVG*VRARGE Trigger: CTCTCCACGCGCACGAACTCAGCCAACGATTTCTGA...GTAATTGTACGTCCTGGGATGATATCCAGTGTGTTGAAGAATTTGGTGCCAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | CAATTACTGACTTGGACTTCCCCACTAGGGCACCTGCTACACTTCCGGCACATCAATTCTTCAACACACTaGATATCATCCCAGGACGTA | + |
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Preference number: 4 (lower is better) Translates to: QLLTWTSPLGHLLHFRHINSSTH*ISSQDV Trigger: TACGTCCTGGGATGATATCCAGTGTGTTGAAGAATT...GATGTGCCGGAAGTGTAGCAGGTGCCCTAGTGGGGAAGTCCAAGTCAGTAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | CACAGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCTGGGGATCCGGGCCATaGTATGGTTCCCGACGCCGT | + |
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Preference number: 4 (lower is better) Translates to: HSEVFQTNTIRSTIRTMIWGSGP*YGSRRR Trigger: ACGGCGTCGGGAACCATACCATGGCCCGGATCCCCA...GATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR TCA 90 bp | CATTGGCACCAAATTCTTCAACACACTGGATATCATCCCAGGACGTACAATTACGTATGTTCTGATCTATaGGATCTGGCAGCAGGACCG | + |
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Preference number: 4 (lower is better) Translates to: HWHQILQHTGYHPRTYNYVCSDL*DLAAGP Trigger: CGGTCCTGCTGCCAGATCTCATAGATCAGAACATAC...GTAATTGTACGTCCTGGGATGATATCCAGTGTGTTGAAGAATTTGGTGCCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | CATTGGCACCAAATTCTTCAACACACTGGATATCATCCCAGGACGTACAATTACTCTATCAGAAATCGTTaGCTGAGTTCGTGCGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: HWHQILQHTGYHPRTYNYSIRNR*LSSCAW Trigger: CCACGCGCACGAACTCAGCCAACGATTTCTGATAGA...GTAATTGTACGTCCTGGGATGATATCCAGTGTGTTGAAGAATTTGGTGCCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | CATTGGCACCAAATTCTTCAACACACTGGATATCATCCCAGGACGTACAATTACTGTCTCTTCAGCAGCTaGGGTTTCCACAGTGGCATT | + |
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Preference number: 4 (lower is better) Translates to: HWHQILQHTGYHPRTYNYCLFSS*GFHSGI Trigger: AATGCCACTGTGGAAACCCCAGCTGCTGAAGAGACA...GTAATTGTACGTCCTGGGATGATATCCAGTGTGTTGAAGAATTTGGTGCCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | CATTGGCACCAAATTCTTCAACACACTGGATATCATCCCAGGACGTACAATTACGTACAATTACTGACTTaGACTTCCCCACTAGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: HWHQILQHTGYHPRTYNYVQLLT*TSPLGH Trigger: GTGCCCTAGTGGGGAAGTCCAAGTCAGTAATTGTAC...GTAATTGTACGTCCTGGGATGATATCCAGTGTGTTGAAGAATTTGGTGCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR GCA 90 bp | CACAGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCCGCTCCTTCACCCCTTaGATCTCTGGTCAAACTCCC | + |
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Preference number: 4 (lower is better) Translates to: HSEVFQTNTIRSTIRTMIRSFTP*ISGQTP Trigger: GGGAGTTTGACCAGAGATGCAAGGGGTGAAGGAGCG...GATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR TCA 90 bp | CACAGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCCCCTACGATGGTGCATaGGAGGTAATGAGAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: HSEVFQTNTIRSTIRTMIPYDGA*EVMRRG Trigger: GCCTCTTCTCATTACCTCTCATGCACCATCGTAGGG...GATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | AGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCCCTCGAACTTTAGGGTCTTaGGGATCCGGGCCATGGTAT | + |
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Preference number: 4 (lower is better) Translates to: SEVFQTNTIRSTIRTMIPRTLGS*GSGPWY Trigger: ATACCATGGCCCGGATCCCCAAGACCCTAAAGTTCG...AGGGATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | AGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCCCTCTGATCTATGAGATCTaGCAGCAGGACCGCGACGAT | + |
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Preference number: 4 (lower is better) Translates to: SEVFQTNTIRSTIRTMIPLIYEI*QQDRDD Trigger: ATCGTCGCGGTCCTGCTGCCAGATCTCATAGATCAG...AGGGATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CCA 90 bp | AGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCCCTCACCCCTTGCATCTCTaGTCAAACTCCCAAAAATCT | + |
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Preference number: 4 (lower is better) Translates to: SEVFQTNTIRSTIRTMIPHPLHL*SNSQKS Trigger: AGATTTTTGGGAGTTTGACCAGAGATGCAAGGGGTG...AGGGATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR GCA 90 bp | AGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCCCTTTTCATTCCGGAAGGTaGCTTCTTTACACTGACACA | + |
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Preference number: 4 (lower is better) Translates to: SEVFQTNTIRSTIRTMIPFHSGR*LLYTDT Trigger: TGTGTCAGTGTAAAGAAGGCACCTTCCGGAATGAAA...AGGGATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CAA 90 bp | CAATTACTGACTTGGACTTCCCCACTAGGGCACCTGCTACACTTCCGGCACATCATCTATCAGAAATCGTaGGCTGAGTTCGTGCGCGTG | + |
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Preference number: 5 (lower is better) Translates to: QLLTWTSPLGHLLHFRHIIYQKS*AEFVRV Trigger: CACGCGCACGAACTCAGCCAACGATTTCTGATAGAT...GATGTGCCGGAAGTGTAGCAGGTGCCCTAGTGGGGAAGTCCAAGTCAGTAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CAA 90 bp | CTGGATATCATCCCAGGACGTACAATTACTGACTTGGACTTCCCCACTAGGGCAACGAACTTTAGGGTCTaGGGGATCCGGGCCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: LDIIPGRTITDLDFPTRATNFRV*GIRAMV Trigger: TACCATGGCCCGGATCCCCAAGACCCTAAAGTTCGT...TGCCCTAGTGGGGAAGTCCAAGTCAGTAATTGTACGTCCTGGGATGATATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CAA 90 bp | AGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCCCTGCGCTCCTTCACCCCTaGCATCTCTGGTCAAACTCC | + |
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Preference number: 5 (lower is better) Translates to: SEVFQTNTIRSTIRTMIPALLHP*HLWSNS Trigger: GGAGTTTGACCAGAGATGCAAGGGGTGAAGGAGCGC...AGGGATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CAA 90 bp | CATTGGCACCAAATTCTTCAACACACTGGATATCATCCCAGGACGTACAATTACGTTTCCACAGTGGCATaGGCACCAAATTCTTCAACA | + |
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Preference number: 5 (lower is better) Translates to: HWHQILQHTGYHPRTYNYVSTVA*APNSST Trigger: TGTTGAAGAATTTGGTGCCAATGCCACTGTGGAAAC...GTAATTGTACGTCCTGGGATGATATCCAGTGTGTTGAAGAATTTGGTGCCAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS-3UTR CAA 90 bp | CACAGTGAAGTCTTTCAAACAAACACAATCAGAAGCACAATTAGAACTATGATCCGTACAATTACTGACTaGGACTTCCCCACTAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: HSEVFQTNTIRSTIRTMIRTITD*DFPTRA Trigger: TGCCCTAGTGGGGAAGTCCAAGTCAGTAATTGTACG...GATCATAGTTCTAATTGTGCTTCTGATTGTGTTTGTTTGAAAGACTTCACTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517558.1 |
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| CDS GCA 72 bp | GAGTTCCCTAACGGTAGGAAGCGCTCCTTCACCCCTTaGATCTCTGGTCAAACTCCCAAAAATCTATCAGAA | + |
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Preference number: 6 (lower is better) Translates to: EFPNGRKRSFTP*ISGQTPKNLSE Trigger: TTCTGATAGATTTTTGGGAGTTTGACCAGAGATGCAAGGGGTGAAGGAGCGCTTCCTACCGTTAGGGAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000356864.4 ENST00000517558.1 |
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