RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFRSF10B (Homo sapiens)

Ensembl gene IDs: ENSG00000120889

Ensembl transcript IDs: ENST00000276431.9, ENST00000347739.3, ENST00000518531.5, ENST00000519028.1, ENST00000519910.1, ENST00000523504.5

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCCGGTTCCAGCAGATGCTCTGACTCCCCGGGGGACAACATGTTaGCACCTGTTGGCTCTGCTGGCTCCTGGACTTCCATTTCCTGCT +
Preference number: 1 (lower is better)
Translates to: LPVPADALTPRGTTC*HLLALLAPGLPFPA
Trigger: AGCAGGAAATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGAACCGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR CCA 90 bp GCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTGATGTTGGATaGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACT +
Preference number: 1 (lower is better)
Translates to: AVKSYRMFHPLGDVG*ESFFQYRSCDNCGT
Trigger: AGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
3UTR TCA 90 bp AACAATGACATCCCAAACCAAATCTCAAAGTACGCACAAACGGAATaGTCCAGACATTTCCATAGTGTCCTTATTATCACATTCAGCTTA +
Preference number: 1 (lower is better)
Translates to: NNDIPNQISKYAQTE*SRHFHSVLIITFSL
Trigger: TAAGCTGAATGTGATAATAAGGACACTATGGAAATGTCTGGATCATTCCGTTTGTGCGTACTTTGAGATTTGGTTTGGGATGTCATTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
3UTR CAA 90 bp TCTGCCGGTTCCAGCAGATGCTCTGACTCCCCGGGGGACAACATGTaGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCCATTTCCTGC +
Preference number: 2 (lower is better)
Translates to: SAGSSRCSDSPGDNM*TPVGSAGSWTSISC
Trigger: GCAGGAAATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGAACCGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR TCA 90 bp TCTGACTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGTACTCACGATCTCATTaGGGACATTGTCCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: SDSPGDNMLTPVGSAGSWYSRSH*GHCPQP
Trigger: GGGCTGAGGACAATGTCCTCAATGAGATCGTGAGTA...CCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR TCA 90 bp CCACTTTATCAGCATCGTGTACAAGGTGTCCCTGTGGCCCGCTGCCTCAGCTTTGTGGCACTTTCCTACTaGCTGGAGTCCAGTTGGGCT +
Preference number: 2 (lower is better)
Translates to: PLYQHRVQGVPVARCLSFVALSY*LESSWA
Trigger: AGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCAC...AAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATAAAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR GCA 90 bp GGTGTGGACAGAGGCATCTCGCCCGGTTTTGTTGACCCACTTTATCAGCATCGTTGGACTTCCATTTCCTaGTCAGGGACCTGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: GVDRGISPGFVDPLYQHRWTSIS*SGTWVG
Trigger: GCCCACCCAGGTCCCTGAGCAGGAAATGGAAGTCCA...ACGATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR TCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTGGTGGGCAGACTGCTTaGGTCCAGGAATTCGAGACC +
Preference number: 2 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGGGQTA*VQEFET
Trigger: GGTCTCGAATTCCTGGACTCAAGCAGTCTGCCCACC...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR-3UTR TCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCGGGGGACAACATGTTaGCACCTGTTGGCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGRGTTC*HLLALL
Trigger: CAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCG...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR GCA 90 bp GGTGTGGACAGAGGCATCTCGCCCGGTTTTGTTGACCCACTTTATCAGCATCGTGGGACCTGGGTGGGCTaGAAGATACTCACGATCTCA +
Preference number: 2 (lower is better)
Translates to: GVDRGISPGFVDPLYQHRGTWVG*KILTIS
Trigger: TGAGATCGTGAGTATCTTGCAGCCCACCCAGGTCCC...ACGATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR GCA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGTCCCTGTGGCCCGCTaGCTCAGCTTTAGCCACCTT +
Preference number: 2 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCVPVAR*LSFSHL
Trigger: AAGGTGGCTAAAGCTGAGGCAGCGGGCCACAGGGAC...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR CCA 90 bp TCCAGCAGATGCTCTGACTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTGGATGTTCCATCCACTaGGTGATGTTGGATGGGAGA +
Preference number: 2 (lower is better)
Translates to: SSRCSDSPGDNMLTPVGSGCSIH*VMLDGR
Trigger: TCTCCCATCCAACATCACCCAGTGGATGGAACATCC...AGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR CCA 90 bp ACAAGTGGTCCTCAATCTTCTGCTTGGCAAGTCTCTCTCCCAGCGTCTCCAAGGCATGTTGACACCTGTTaGCTCTGCTGGCTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: TSGPQSSAWQVSLPASPRHVDTC*LCWLLD
Trigger: GTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATG...CCTTGGAGACGCTGGGAGAGAGACTTGCCAAGCAGAAGATTGAGGACCACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR CCA 90 bp CAGGGTGTGGACAGAGGCATCTCGCCCGGTTTTGTTGACCCACTTTATCAGCATACCTGTTGGCTCTGCTaGCTCCTGGACTTCCATTTC +
Preference number: 2 (lower is better)
Translates to: QGVDRGISPGFVDPLYQHTCWLC*LLDFHF
Trigger: GAAATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGT...ATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR CCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTTACAAGGTGTCCCTGTaGCCCGCTGCCTCAGCTTTA +
Preference number: 2 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGYKVSL*PAASAL
Trigger: TAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTA...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR TCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCCAGTACCGGTCATGTaGCAATTGTGGCACTTTCCT +
Preference number: 2 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGPVPVM*QLWHFP
Trigger: AGGAAAGTGCCACAATTGTCACATGACCGGTACTGG...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
3UTR-3UTR TCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGTGCCTTCTTCGCACTaGCACACTGTGTTTCTGGTC +
Preference number: 2 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTVPSSH*HTVFLV
Trigger: GACCAGAAACACAGTGTGTCAGTGCGAAGAAGGCAC...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR CCA 90 bp ACAAGTGGTCCTCAATCTTCTGCTTGGCAAGTCTCTCTCCCAGCGTCTCCAAGGCTGGGTGATGTTGGATaGGAGAGTTTCTTCCAGTAC +
Preference number: 2 (lower is better)
Translates to: TSGPQSSAWQVSLPASPRLGDVG*ESFFQY
Trigger: GTACTGGAAGAAACTCTCCCATCCAACATCACCCAG...CCTTGGAGACGCTGGGAGAGAGACTTGCCAAGCAGAAGATTGAGGACCACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR TCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATCCAGTACCGGTCATGTaGCAATTGTGGCACTTTCCT +
Preference number: 2 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHPVPVM*QLWHFP
Trigger: AGGAAAGTGCCACAATTGTCACATGACCGGTACTGG...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
3UTR-3UTR GCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTTCTTCCCGGAAGGTaGCTTCTTCGCACTGACACA +
Preference number: 2 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFLLPGR*LLRTDT
Trigger: TGTGTCAGTGCGAAGAAGGCACCTTCCGGGAAGAAG...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR GCA 90 bp GGTGTGGACAGAGGCATCTCGCCCGGTTTTGTTGACCCACTTTATCAGCATCGTAATCAAGACTACGGCTaGAACTGTGACTCCTATGAT +
Preference number: 2 (lower is better)
Translates to: GVDRGISPGFVDPLYQHRNQDYG*NCDSYD
Trigger: ATCATAGGAGTCACAGTTGCAGCCGTAGTCTTGATT...ACGATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR GCA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTAAAGGGCACCAAGTCTaGAAAGTCATCGAAGCACTG +
Preference number: 2 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCKGHQV*KVIEAL
Trigger: CAGTGCTTCGATGACTTTGCAGACTTGGTGCCCTTT...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR CCA 90 bp TTCTATCTCCTGAGCCCAAACAGGGCTCAAGTTCACTTGGGATATGACATAGACCATAGATGGGGGCTATaGGTGCAAATGAGACTGCCC +
Preference number: 2 (lower is better)
Translates to: FYLLSPNRAQVHLGYDIDHRWGL*VQMRLP
Trigger: GGGCAGTCTCATTTGCACCCATAGCCCCCATCTATG...GTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGGAGATAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR-3UTR CCA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTCCAGAGCTCAACAAGTaGTCCTCAATCTTCTGCTTG +
Preference number: 2 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCPELNK*SSIFCL
Trigger: CAAGCAGAAGATTGAGGACCACTTGTTGAGCTCTGG...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR TCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTTCATATAGTATCAAGTaGAGTCGGACAACGACTGTG +
Preference number: 2 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGSYSIK*SRTTTV
Trigger: CACAGTCGTTGTCCGACTTCACTTGATACTATATGA...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR-3UTR TCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATTACGCACAAACGGAATaGTCCAGACATTTCCATAGT +
Preference number: 2 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHYAQTE*SRHFHS
Trigger: ACTATGGAAATGTCTGGATCATTCCGTTTGTGCGTA...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
3UTR-3UTR TCA 90 bp CCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTATGGAGAAAGCCAAAGTACATCTaGGGGAGGGCTGGAACCCAG +
Preference number: 2 (lower is better)
Translates to: PGMTTCINDPSMTEILWRKPKYI*GRAGTQ
Trigger: CTGGGTTCCAGCCCTCCCTCAGATGTACTTTGGCTT...TCTCCATAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR-3UTR CCA 90 bp TTCTATCTCCTGAGCCCAAACAGGGCTCAAGTTCACTTGGGATATGACATAGACGGATCCAGTTCTCTTTaGTCCCGACTCATATGTAAA +
Preference number: 2 (lower is better)
Translates to: FYLLSPNRAQVHLGYDIDGSSSL*SRLICK
Trigger: TTTACATATGAGTCGGGACCAAAGAGAACTGGATCC...GTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGGAGATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR-3UTR TCA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTAACAGATAACCAGAAGTaGGCCGGGCCATCTACTCCT +
Preference number: 2 (lower is better)
Translates to: KTPGMTTCINDPSMTEILTDNQK*AGPSTP
Trigger: AGGAGTAGATGGCCCGGCTCACTTCTGGTTATCTGT...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR-3UTR CCA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTATCCCAGCTATTTGGATaGCTGAGGTGGGAGAATCGC +
Preference number: 2 (lower is better)
Translates to: KTPGMTTCINDPSMTEILSQLFG*LRWENR
Trigger: GCGATTCTCCCACCTCAGCCATCCAAATAGCTGGGA...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR CAA 90 bp GATTTTGTCTTCTATCTCCTGAGCCCAAACAGGGCTCAAGTTCACTaGGGATATGACATAGACCCTATTGTTATGTGTGATCTAACCCAT +
Preference number: 2 (lower is better)
Translates to: DFVFYLLSPNRAQVH*GYDIDPIVMCDLTH
Trigger: ATGGGTTAGATCACACATAACAATAGGGTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGGAGATAGAAGACAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR TCA 72 bp CCCAGCCTGTCCATAGATGGGGGCTATGGGTGCAAATaGGACTGCCCAGGTAGGGACCAGCCACACACAGGA +
Preference number: 3 (lower is better)
Translates to: PSLSIDGGYGCK*DCPGRDQPHTG
Trigger: TCCTGTGTGTGGCTGGTCCCTACCTGGGCAGTCTCATTTGCACCCATAGCCCCCATCTATGGACAGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR TCA 72 bp CCAGCAGATGCTCTGACTCCCCGGGGGACAACATGTTaGCACCTGTTGGCTCTGCTGGCTCCTGGACTTCCA +
Preference number: 3 (lower is better)
Translates to: PADALTPRGTTC*HLLALLAPGLP
Trigger: TGGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR CCA 72 bp CAAGCATGGGGGCTCACGCCTCTAATTCCACCGCTTTaGGAGTCTGAGGTGGGCAGACTGCTTGAGTCCAGG +
Preference number: 3 (lower is better)
Translates to: QAWGLTPLIPPL*ESEVGRLLESR
Trigger: CCTGGACTCAAGCAGTCTGCCCACCTCAGACTCCCAAAGCGGTGGAATTAGAGGCGTGAGCCCCCATGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR-3UTR CAA 90 bp CAGGGTGTGGACAGAGGCATCTCGCCCGGTTTTGTTGACCCACTTTATCAGCATCCGGGGGACAACATGTaGACACCTGTTGGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: QGVDRGISPGFVDPLYQHPGDNM*TPVGSA
Trigger: AGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGG...ATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR TCA 72 bp GCAGGGTGTGGACAGAGGCATCTCGCCCGGTTTTGTTaGCCCACTTTATCAGCATCGTGTACAAGGTGTCCC +
Preference number: 3 (lower is better)
Translates to: AGCGQRHLARFC*PTLSASCTRCP
Trigger: GGGACACCTTGTACACGATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR CAA 90 bp TCCAGCAGATGCTCTGACTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTATCCACTGGGTGATGTaGGATGGGAGAGTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: SSRCSDSPGDNMLTPVGSIHWVM*DGRVSS
Trigger: GGAAGAAACTCTCCCATCCAACATCACCCAGTGGAT...AGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR CAA 90 bp CCACTTTATCAGCATCGTGTACAAGGTGTCCCTGTGGCCCGCTGCCTCAGCTTTGCCACCTTTATCTCATaGTCCATGAGGCCCAACTTC +
Preference number: 3 (lower is better)
Translates to: PLYQHRVQGVPVARCLSFATFIS*SMRPNF
Trigger: GAAGTTGGGCCTCATGGACAATGAGATAAAGGTGGC...AAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATAAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR CCA 72 bp ACCCACTTTATCAGCATCGTGTACAAGGTGTCCCTGTaGCCCGCTGCCTCAGCTTTAGCCACCTTTATCTCA +
Preference number: 3 (lower is better)
Translates to: THFISIVYKVSL*PAASALATFIS
Trigger: TGAGATAAAGGTGGCTAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATAAAGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR GCA 72 bp TATCAGCATCGTGTACAAGGTGTCCCTGTGGCCCGCTaGCTCAGCTTTAGCCACCTTTATCTCATTGTCCAT +
Preference number: 3 (lower is better)
Translates to: YQHRVQGVPVAR*LSFSHLYLIVH
Trigger: ATGGACAATGAGATAAAGGTGGCTAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR CAA 90 bp CACTTTATCAGCATCGTGTACAAGGTGTCCCTGTGGCCCGCTGCCTCAGCTTTAATGATGCCTGATTCTTaGTGGACACATTCGATGTCA +
Preference number: 3 (lower is better)
Translates to: HFISIVYKVSLWPAASALMMPDS*WTHSMS
Trigger: TGACATCGAATGTGTCCACAAAGAATCAGGCATCAT...TAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR-3UTR CAA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTATACTCACGATCTCATaGAGGACATTGTCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCILTIS*RTLSSA
Trigger: GGCTGAGGACAATGTCCTCAATGAGATCGTGAGTAT...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
3UTR TCA 72 bp TGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTaGCAATTGTGGCACTTTCCTACTGACTGGAGTCCA +
Preference number: 3 (lower is better)
Translates to: CWMGEFLPVPVM*QLWHFPTDWSP
Trigger: TGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
3UTR TCA 72 bp TGCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTaGTGTTGGATGGGAGAGTTTCTTCCAGTACCGGTC +
Preference number: 3 (lower is better)
Translates to: CSEKLQDVPSTG*CWMGEFLPVPV
Trigger: GACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
3UTR-3UTR CAA 90 bp TTCTATCTCCTGAGCCCAAACAGGGCTCAAGTTCACTTGGGATATGACATAGACATCCACTGGGTGATGTaGGATGGGAGAGTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: FYLLSPNRAQVHLGYDIDIHWVM*DGRVSS
Trigger: GGAAGAAACTCTCCCATCCAACATCACCCAGTGGAT...GTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGGAGATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR CCA 72 bp ACACTATACTATGGCTGTCCTGTGTCACATGCTATTTaGCCTGGGGATATAGCAAAGCCTAATGTAACTAAA +
Preference number: 3 (lower is better)
Translates to: TLYYGCPVSHAI*PGDIAKPNVTK
Trigger: TTTAGTTACATTAGGCTTTGCTATATCCCCAGGCCAAATAGCATGTGACACAGGACAGCCATAGTATAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR-3UTR CAA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTACATATACTTGTAAGGTaGTCCAGTTCAAAAGACTGG +
Preference number: 3 (lower is better)
Translates to: KTPGMTTCINDPSMTEILHILVR*SSSKDW
Trigger: CCAGTCTTTTGAACTGGACAACCTTACAAGTATATG...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp CCGGGGGACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCCATTTGTGGGCGCAGAGATTaGGGGGTTCTCCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: PGDNMLTPVGSAGSWTSICGRRD*GVLRPR
Trigger: ACGCGGCCGGAGAACCCCGCAATCTCTGCGCCCACA...AATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp ACAAGTGGTCCTCAATCTTCTGCTTGGCAAGTCTCTCTCCCAGCGTCTCCAAGGCGCCTCCCTGGGTCCTaGGCCGTGCCTTTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: TSGPQSSAWQVSLPASPRRLPGS*AVPFPG
Trigger: GCCCGGAAAAGGCACGGCCCAGGACCCAGGGAGGCG...CCTTGGAGACGCTGGGAGAGAGACTTGCCAAGCAGAAGATTGAGGACCACTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp GGGAGTCTGAGGTGGGCAGACTGCTTGAGTCCAGGAATTCGAGACCACCCTGAGGGGGCCGCTCTCTGCTaGGGAGCTAGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GSLRWADCLSPGIRDHPEGAALC*GARSCW
Trigger: CCAACAAGACCTAGCTCCCCAGCAGAGAGCGGCCCC...CTCAGGGTGGTCTCGAATTCCTGGACTCAAGCAGTCTGCCCACCTCAGACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCGCCTCCCTGGGTCCTaGGCCGTGCCTTTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGRLPGS*AVPFPG
Trigger: GCCCGGAAAAGGCACGGCCCAGGACCCAGGGAGGCG...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCTCCCCGCGCCTCCCTaGGTCCTGGGCCGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGLPAPP*VLGRAF
Trigger: AAAGGCACGGCCCAGGACCCAGGGAGGCGCGGGGAG...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
3UTR CAA 72 bp TCCAGCAGATGCTCTGACTCCCCGGGGGACAACATGTaGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: SSRCSDSPGDNM*TPVGSAGSWTS
Trigger: GGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR TCA 90 bp CCGGGGGACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCCATTGGCCCAACTTCCTCATaGGCGGCTCCCAGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PGDNMLTPVGSAGSWTSIGPTSS*AAPRSQ
Trigger: TTGACTCCTGGGAGCCGCTCATGAGGAAGTTGGGCC...AATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp CTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCCGTCGGTGTATTTTGTaGGCGCAGAGATTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: LPGGQHVDTCWLCWLLDFRRCIL*AQRLRG
Trigger: ACCCCGCAATCTCTGCGCCCACAAAATACACCGACG...GAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTCGCCTCCCTGGGTCCTaGGCCGTGCCTTTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCRLPGS*AVPFPG
Trigger: GCCCGGAAAAGGCACGGCCCAGGACCCAGGGAGGCG...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCCTGGGTCCTGGGCCGTaGCTTTTCCGGGCCCCCGAA +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTLGPGP*LFRAPE
Trigger: TTCGGGGGCCCGGAAAAGGCACGGCCCAGGACCCAG...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTCTCCCCGCGCCTCCCTaGGTCCTGGGCCGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTILPAPP*VLGRAF
Trigger: AAAGGCACGGCCCAGGACCCAGGGAGGCGCGGGGAG...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CCGGGGGACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCCATTGCTCAGGGACCTGGGTaGGCTGCAAGATACTCACGA +
Preference number: 4 (lower is better)
Translates to: PGDNMLTPVGSAGSWTSIAQGPG*AARYSR
Trigger: TCGTGAGTATCTTGCAGCCCACCCAGGTCCCTGAGC...AATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp CACTTTATCAGCATCGTGTACAAGGTGTCCCTGTGGCCCGCTGCCTCAGCTTTAGCATCCAGCAGGGTGTaGACAGAGGCATCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: HFISIVYKVSLWPAASALASSRV*TEASRP
Trigger: CGGGCGAGATGCCTCTGTCCACACCCTGCTGGATGC...TAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATAAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp GGGAGTCTGAGGTGGGCAGACTGCTTGAGTCCAGGAATTCGAGACCACCCTGAGTCCCCCTTGATGCCATaGCAGACGTGGGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: GSLRWADCLSPGIRDHPESPLMP*QTWETD
Trigger: ATCTGTCTCCCACGTCTGCCATGGCATCAAGGGGGA...CTCAGGGTGGTCTCGAATTCCTGGACTCAAGCAGTCTGCCCACCTCAGACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp CTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCCCGTCTTCTGAGATATaGTGTCCAACAGCAGGACCG +
Preference number: 4 (lower is better)
Translates to: LPGGQHVDTCWLCWLLDFPSSEI*CPTAGP
Trigger: CGGTCCTGCTGTTGGACACCATATCTCAGAAGACGG...GAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR TCA 90 bp GGGAGTCTGAGGTGGGCAGACTGCTTGAGTCCAGGAATTCGAGACCACCCTGAGCGGGCCATCTACTCCTaGGATGGCAACCATTTCACA +
Preference number: 4 (lower is better)
Translates to: GSLRWADCLSPGIRDHPERAIYS*DGNHFT
Trigger: TGTGAAATGGTTGCCATCTCAGGAGTAGATGGCCCG...CTCAGGGTGGTCTCGAATTCCTGGACTCAAGCAGTCTGCCCACCTCAGACTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp TCTGACTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGTGTTTCTGGTCGTGGTaGAGGGACTTAGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: SDSPGDNMLTPVGSAGSWCFWSW*RDLAPL
Trigger: AAGTGGAGCTAAGTCCCTGCACCACGACCAGAAACA...CCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTGCATCCAGCAGGGTGTaGACAGAGGCATCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGASSRV*TEASRP
Trigger: CGGGCGAGATGCCTCTGTCCACACCCTGCTGGATGC...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTGGCCCAACTTCCTCATaGGCGGCTCCCAGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGGPTSS*AAPRSQ
Trigger: TTGACTCCTGGGAGCCGCTCATGAGGAAGTTGGGCC...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp CACACAGGACTTCACGTGGATCCAGTTCTCTTTGGTCCCGACTCATATGTAAACTGTGGGCGCAGAGATTaGGGGGTTCTCCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: HTGLHVDPVLFGPDSYVNCGRRD*GVLRPR
Trigger: ACGCGGCCGGAGAACCCCGCAATCTCTGCGCCCACA...GTTTACATATGAGTCGGGACCAAAGAGAACTGGATCCACGTGAAGTCCTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp ATGCCAAGTGCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTGATGTTGGACTGGGTCCTGGGCCGTaGCTTTTCCGGGCCCCCGAA +
Preference number: 4 (lower is better)
Translates to: MPSAVKSYRMFHPLGDVGLGPGP*LFRAPE
Trigger: TTCGGGGGCCCGGAAAAGGCACGGCCCAGGACCCAG...TCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGCACTTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TCCAGCAGATGCTCTGACTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTCTTCTTCCCGGAAGGTaGCTTCTTCGCACTGACACA +
Preference number: 4 (lower is better)
Translates to: SSRCSDSPGDNMLTPVGSLLPGR*LLRTDT
Trigger: TGTGTCAGTGCGAAGAAGGCACCTTCCGGGAAGAAG...AGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR GCA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCCGGTTCCAGCAGATaGTCTGACTCCCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVAGSSR*SDSPGD
Trigger: GTCCCCCGGGGAGTCAGAGCATCTGCTGGAACCGGC...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TCCAGCAGATGCTCTGACTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTAGACCTTTCAGCTTCTaGCGGTTCCAGCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: SSRCSDSPGDNMLTPVGSRPFSF*RFQQML
Trigger: GAGCATCTGCTGGAACCGGCAGAAGCTGAAAGGTCT...AGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTGGGGCCGCTCTCTGCTaGGGAGCTAGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFGAALC*GARSCW
Trigger: CCAACAAGACCTAGCTCCCCAGCAGAGAGCGGCCCC...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR CCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTGGACCTCTTTTGTTGTaGGGCCGCTCTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGGPLLL*GRSLLG
Trigger: CCCCAGCAGAGAGCGGCCCCACAACAAAAGAGGTCC...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR CCA 90 bp TCCAGCAGATGCTCTGACTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTACCTGTTGGCTCTGCTaGCTCCTGGACTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: SSRCSDSPGDNMLTPVGSTCWLC*LLDFHF
Trigger: GAAATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGT...AGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR TCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTGTCCCCACCACCACCTaGGCAGATGCCTTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGVPTTT*ADAFQV
Trigger: TACCTGAAAGGCATCTGCTCAGGTGGTGGTGGGGAC...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTTTCCAGCAGATGCTCTaGCTCCCCGGGGGACAACAT +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGFQQML*LPGGQH
Trigger: ATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGAA...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGCCCAACTTCCTCATaGGCGGCTCCCAGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTGPTSS*AAPRSQ
Trigger: TTGACTCCTGGGAGCCGCTCATGAGGAAGTTGGGCC...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp GACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCCATTTCCTGCGTGGCACTTTCCTACTaGCTGGAGTCCAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: DNMLTPVGSAGSWTSISCVALSY*LESSWA
Trigger: AGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCAC...GCAGGAAATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR TCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTGGCTATGGGTGCAAATaGGACTGCCCAGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGGYGCK*DCPGRD
Trigger: GTCCCTACCTGGGCAGTCTCATTTGCACCCATAGCC...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTTGTGGGCGCAGAGATTaGGGGGTTCTCCGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTCGRRD*GVLRPR
Trigger: ACGCGGCCGGAGAACCCCGCAATCTCTGCGCCCACA...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATTGTGGGGCCGCTCTCTaGTGGGGAGCTAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHCGAAL*WGARSC
Trigger: ACAAGACCTAGCTCCCCAGCAGAGAGCGGCCCCACA...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR GCA 90 bp TTCTATCTCCTGAGCCCAAACAGGGCTCAAGTTCACTTGGGATATGACATAGACGCCGGTTCCAGCAGATaGTCTGACTCCCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: FYLLSPNRAQVHLGYDIDAGSSR*SDSPGD
Trigger: GTCCCCCGGGGAGTCAGAGCATCTGCTGGAACCGGC...GTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGGAGATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGTCCCTGTGGCCCGCTaGCTCAGCTTTAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTVPVAR*LSFSHL
Trigger: AAGGTGGCTAAAGCTGAGGCAGCGGGCCACAGGGAC...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTGGACCTCTTTTGTTGTaGGGCCGCTCTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFGPLLL*GRSLLG
Trigger: CCCCAGCAGAGAGCGGCCCCACAACAAAAGAGGTCC...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR CCA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCATCCAGCAGGGTGTaGACAGAGGCATCTCGCCCG +
Preference number: 4 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVASSRV*TEASRP
Trigger: CGGGCGAGATGCCTCTGTCCACACCCTGCTGGATGC...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCGACCTGGGACCGGACTaGCACCTTCTGAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFDLGPD*HLLSPE
Trigger: CTCAGGGCTCAGAAGGTGCCAGTCCGGTCCCAGGTC...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCCGGGGGACAACATGTTaGCACCTGTTGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTRGTTC*HLLALL
Trigger: CAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCG...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTCGGGGGACAACATGTTaGCACCTGTTGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCRGTTC*HLLALL
Trigger: CAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCG...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCCAGCAGATGCTCTaGCTCCCCGGGGGACAACAT +
Preference number: 4 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFFQQML*LPGGQH
Trigger: ATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGAA...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp CCACTTTATCAGCATCGTGTACAAGGTGTCCCTGTGGCCCGCTGCCTCAGCTTTCCAGTACCGGTCATGTaGCAATTGTGGCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: PLYQHRVQGVPVARCLSFPVPVM*QLWHFP
Trigger: AGGAAAGTGCCACAATTGTCACATGACCGGTACTGG...AAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATAAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR GCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTTGTGGGGCCGCTCTCTaGTGGGGAGCTAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTICGAAL*WGARSC
Trigger: ACAAGACCTAGCTCCCCAGCAGAGAGCGGCCCCACA...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR GCA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGTCCCTGTGGCCCGCTaGCTCAGCTTTAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVVPVAR*LSFSHL
Trigger: AAGGTGGCTAAAGCTGAGGCAGCGGGCCACAGGGAC...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATCCAGGAGGCGGAGGTTaGACTGAGCCAAGATCGTAC +
Preference number: 4 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHPGGGG*TEPRSY
Trigger: GTACGATCTTGGCTCAGTGCAACCTCCGCCTCCTGG...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCCGTCTCCTCCACAGCTaGGACTTCCCCACTGTGCTT +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTRLLHS*DFPTVL
Trigger: AAGCACAGTGGGGAAGTCCCAGCTGTGGAGGAGACG...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp CAGGGTGTGGACAGAGGCATCTCGCCCGGTTTTGTTGACCCACTTTATCAGCATCCTCAATCTTCTGCTTaGCAAGTCTCTCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: QGVDRGISPGFVDPLYQHPQSSA*QVSLPA
Trigger: CGCTGGGAGAGAGACTTGCCAAGCAGAAGATTGAGG...ATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR TCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCTAGGTCTTGTTGGGTaGTCAGAGCAGACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGLGLVG*SEQTQL
Trigger: CAGCTGAGTCTGCTCTGATCACCCAACAAGACCTAG...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR TCA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGTCCCCACCACCACCTaGGCAGATGCCTTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVVPTTT*ADAFQV
Trigger: TACCTGAAAGGCATCTGCTCAGGTGGTGGTGGGGAC...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCGTCCCCACCACCACCTaGGCAGATGCCTTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFVPTTT*ADAFQV
Trigger: TACCTGAAAGGCATCTGCTCAGGTGGTGGTGGGGAC...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTCGGGGGACAACATGTTaGCACCTGTTGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTIRGTTC*HLLALL
Trigger: CAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCG...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCTTCCAGCAGATGCTCTaGCTCCCCGGGGGACAACAT +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFFQQML*LPGGQH
Trigger: ATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGAA...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGGCACTTTCCTACTaGCTGGAGTCCAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHVALSY*LESSWA
Trigger: AGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCAC...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTGTGGCACTTTCCTACTaGCTGGAGTCCAGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFVALSY*LESSWA
Trigger: AGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCAC...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGGTGGGCAGACTGCTTaGGTCCAGGAATTCGAGACC +
Preference number: 4 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVGGQTA*VQEFET
Trigger: GGTCTCGAATTCCTGGACTCAAGCAGTCTGCCCACC...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp GGGAGTCTGAGGTGGGCAGACTGCTTGAGTCCAGGAATTCGAGACCACCCTGAGGAAGTTGCCAATCATTaGAGCCAAAGTACATCTGAG +
Preference number: 4 (lower is better)
Translates to: GSLRWADCLSPGIRDHPEEVANH*SQSTSE
Trigger: CTCAGATGTACTTTGGCTTCAATGATTGGCAACTTC...CTCAGGGTGGTCTCGAATTCCTGGACTCAAGCAGTCTGCCCACCTCAGACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGCCAAGGTGGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVPRWIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCACCTTGG...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGGACCTGGGTGGGCTaGAAGATACTCACGATCTCA +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTGTWVG*KILTIS
Trigger: TGAGATCGTGAGTATCTTGCAGCCCACCCAGGTCCC...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTTGGACTTCCATTTCCTaGTCAGGGACCTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTIWTSIS*SGTWVG
Trigger: GCCCACCCAGGTCCCTGAGCAGGAAATGGAAGTCCA...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTAGACCTTTCAGCTTCTaGCGGTTCCAGCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGRPFSF*RFQQML
Trigger: GAGCATCTGCTGGAACCGGCAGAAGCTGAAAGGTCT...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp CAGGGTGTGGACAGAGGCATCTCGCCCGGTTTTGTTGACCCACTTTATCAGCATTGGTCCTCAATCTTCTaGTTGGCAAGTCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QGVDRGISPGFVDPLYQHWSSIF*LASLSP
Trigger: GGGAGAGAGACTTGCCAAGCAGAAGATTGAGGACCA...ATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGCTCAGGGACCTGGGTaGGCTGCAAGATACTCACGA +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTIAQGPG*AARYSR
Trigger: TCGTGAGTATCTTGCAGCCCACCCAGGTCCCTGAGC...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGGCTCTGCTGGCTCCTaGACTTCCATTTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHGSAGS*TSISCS
Trigger: TGAGCAGGAAATGGAAGTCCAGGAGCCAGCAGAGCC...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTGGCTCTGCTGGCTCCTaGACTTCCATTTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFGSAGS*TSISCS
Trigger: TGAGCAGGAAATGGAAGTCCAGGAGCCAGCAGAGCC...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCCATGTTGACACCTGTTaGCTCTGCTGGCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTHVDTC*LCWLLD
Trigger: GTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATG...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CAGGGTGTGGACAGAGGCATCTCGCCCGGTTTTGTTGACCCACTTTATCAGCATGGATGTTCCATCCACTaGGTGATGTTGGATGGGAGA +
Preference number: 4 (lower is better)
Translates to: QGVDRGISPGFVDPLYQHGCSIH*VMLDGR
Trigger: TCTCCCATCCAACATCACCCAGTGGATGGAACATCC...ATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR TCA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTCTAGGTCTTGTTGGGTaGTCAGAGCAGACTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFLGLVG*SEQTQL
Trigger: CAGCTGAGTCTGCTCTGATCACCCAACAAGACCTAG...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR TCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATCTCGCCCGGTTTTGTTaGCCCACTTTATCAGCATCG +
Preference number: 4 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHLARFC*PTLSAS
Trigger: CGATGCTGATAAAGTGGGTCAACAAAACCGGGCGAG...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCAAGCCAAAGTACATCTaGGGGAGGGCTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFKPKYI*GRAGTQ
Trigger: CTGGGTTCCAGCCCTCCCTCAGATGTACTTTGGCTT...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp GACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCCATTTCCTGCATCTCTACCGTCTTCTaGGATATGGTGTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: DNMLTPVGSAGSWTSISCISTVF*DMVSNS
Trigger: GCTGTTGGACACCATATCTCAGAAGACGGTAGAGAT...GCAGGAAATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR GCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATCTTCTTCCCGGAAGGTaGCTTCTTCGCACTGACACA +
Preference number: 4 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHLLPGR*LLRTDT
Trigger: TGTGTCAGTGCGAAGAAGGCACCTTCCGGGAAGAAG...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTCTTCTTCCCGGAAGGTaGCTTCTTCGCACTGACACA +
Preference number: 4 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCLLPGR*LLRTDT
Trigger: TGTGTCAGTGCGAAGAAGGCACCTTCCGGGAAGAAG...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGGGACCTGGGTGGGCTaGAAGATACTCACGATCTCA +
Preference number: 4 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVGTWVG*KILTIS
Trigger: TGAGATCGTGAGTATCTTGCAGCCCACCCAGGTCCC...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTTGGACTTCCATTTCCTaGTCAGGGACCTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTWTSIS*SGTWVG
Trigger: GCCCACCCAGGTCCCTGAGCAGGAAATGGAAGTCCA...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TCTGCAAAGTCATCGAAGCACTGTCTCAGAGTCTCAGTGGGATCACCTTCATTTTGGACTTCCATTTCCTaGTCAGGGACCTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SAKSSKHCLRVSVGSPSFWTSIS*SGTWVG
Trigger: GCCCACCCAGGTCCCTGAGCAGGAAATGGAAGTCCA...AAATGAAGGTGATCCCACTGAGACTCTGAGACAGTGCTTCGATGACTTTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR GCA 90 bp GACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCCATTTCCTGCAAAGGGCACCAAGTCTaGAAAGTCATCGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: DNMLTPVGSAGSWTSISCKGHQV*KVIEAL
Trigger: CAGTGCTTCGATGACTTTGCAGACTTGGTGCCCTTT...GCAGGAAATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCGTCGGTGTATTTTGTaGGCGCAGAGATTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFRRCIL*AQRLRG
Trigger: ACCCCGCAATCTCTGCGCCCACAAAATACACCGACG...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTGGAGCTAGGTCTTGTTaGGTGATCAGAGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGGARSC*VIRADS
Trigger: TGAGTCTGCTCTGATCACCCAACAAGACCTAGCTCC...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR CCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCACCTGAATCACACCTaGTGCAGCGCAAGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGHLNHT*CSASRK
Trigger: TTTTCTGCTTGCGCTGCACCAGGTGTGATTCAGGTG...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCGCTCAGGGACCTGGGTaGGCTGCAAGATACTCACGA +
Preference number: 4 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFAQGPG*AARYSR
Trigger: TCGTGAGTATCTTGCAGCCCACCCAGGTCCCTGAGC...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGGCTCTGCTGGCTCCTaGACTTCCATTTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTIGSAGS*TSISCS
Trigger: TGAGCAGGAAATGGAAGTCCAGGAGCCAGCAGAGCC...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CACTTTATCAGCATCGTGTACAAGGTGTCCCTGTGGCCCGCTGCCTCAGCTTTAGTCTCAGAGTCTCAGTaGGATCACCTTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: HFISIVYKVSLWPAASALVSESQ*DHLHLL
Trigger: CAGCAAATGAAGGTGATCCCACTGAGACTCTGAGAC...TAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGTACAAGGTGTCCCTGTaGCCCGCTGCCTCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVYKVSL*PAASAL
Trigger: TAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTA...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp ACAGCCACAATCAAGACTACGGCTGCAACTGTGACTCCTATGATGATGCCTGATTACAAGGTGTCCCTGTaGCCCGCTGCCTCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: TATIKTTAATVTPMMMPDYKVSL*PAASAL
Trigger: TAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTA...ATCAGGCATCATCATAGGAGTCACAGTTGCAGCCGTAGTCTTGATTGTGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTCCTCAATCTTCTGCTTaGCAAGTCTCTCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFPQSSA*QVSLPA
Trigger: CGCTGGGAGAGAGACTTGCCAAGCAGAAGATTGAGG...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp GACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCCATTTCCTGCCCAGAGCTCAACAAGTaGTCCTCAATCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: DNMLTPVGSAGSWTSISCPELNK*SSIFCL
Trigger: CAAGCAGAAGATTGAGGACCACTTGTTGAGCTCTGG...GCAGGAAATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp GACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCCATTTCCTGCCTGGGTGATGTTGGATaGGAGAGTTTCTTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: DNMLTPVGSAGSWTSISCLGDVG*ESFFQY
Trigger: GTACTGGAAGAAACTCTCCCATCCAACATCACCCAG...GCAGGAAATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR TCA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTATCTCTACCGTCTTCTaGGATATGGTGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFISTVF*DMVSRW
Trigger: CCACCTGGACACCATATCTCAGAAGACGGTAGAGAT...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR TCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCTACTCACGATCTCATTaGGGACATTGTCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTYSRSH*GHCPQP
Trigger: GGGCTGAGGACAATGTCCTCAATGAGATCGTGAGTA...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTCTCGCCCGGTTTTGTTaGCCCACTTTATCAGCATCG +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTILARFC*PTLSAS
Trigger: CGATGCTGATAAAGTGGGTCAACAAAACCGGGCGAG...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCCCAGTACCGGTCATGTaGCAATTGTGGCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTPVPVM*QLWHFP
Trigger: AGGAAAGTGCCACAATTGTCACATGACCGGTACTGG...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTGGAACCCAGACAGTaGCATCTTACAGGGGACTTC +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFLEPRQ*HLTGDF
Trigger: GAAGTCCCCTGTAAGATGTCACTGTCTGGGTTCCAG...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTAAAGGGCACCAAGTCTaGAAAGTCATCGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGKGHQV*KVIEAL
Trigger: CAGTGCTTCGATGACTTTGCAGACTTGGTGCCCTTT...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGCTGAGGTGGGCAGACTaGTTGAGTCCAGGAATTCGA +
Preference number: 4 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVLRWAD*LSPGIR
Trigger: TCGAATTCCTGGACTCAAGCAGTCTGCCCACCTCAG...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp TTCTATCTCCTGAGCCCAAACAGGGCTCAAGTTCACTTGGGATATGACATAGACCGTCGGTGTATTTTGTaGGCGCAGAGATTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: FYLLSPNRAQVHLGYDIDRRCIL*AQRLRG
Trigger: ACCCCGCAATCTCTGCGCCCACAAAATACACCGACG...GTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGGAGATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTAGTCTCTCAGGCCCGTaGGTTTCAGCCCTTAAAGTA +
Preference number: 4 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFSLSGP*VSALKV
Trigger: TACTTTAAGGGCTGAAACCCACGGGCCTGAGAGACT...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCCGTCTTCTGAGATATaGTGTCCAGGTGGACACAAT +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGPSSEI*CPGGHN
Trigger: ATTGTGTCCACCTGGACACCATATCTCAGAAGACGG...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR CCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATCACCTGAATCACACCTaGTGCAGCGCAAGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHHLNHT*CSASRK
Trigger: TTTTCTGCTTGCGCTGCACCAGGTGTGATTCAGGTG...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp ATGCCAAGTGCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTGATGTTGGACATGTTGACACCTGTTaGCTCTGCTGGCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: MPSAVKSYRMFHPLGDVGHVDTC*LCWLLD
Trigger: GTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATG...TCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGCACTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp TTCTATCTCCTGAGCCCAAACAGGGCTCAAGTTCACTTGGGATATGACATAGACTACAAGGTGTCCCTGTaGCCCGCTGCCTCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: FYLLSPNRAQVHLGYDIDYKVSL*PAASAL
Trigger: TAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTA...GTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGGAGATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTGGATGTTCCATCCACTaGGTGATGTTGGATGGGAGA +
Preference number: 4 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFGCSIH*VMLDGR
Trigger: TCTCCCATCCAACATCACCCAGTGGATGGAACATCC...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CACACAGGACTTCACGTGGATCCAGTTCTCTTTGGTCCCGACTCATATGTAAACCATAGATGGGGGCTATaGGTGCAAATGAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: HTGLHVDPVLFGPDSYVNHRWGL*VQMRLP
Trigger: GGGCAGTCTCATTTGCACCCATAGCCCCCATCTATG...GTTTACATATGAGTCGGGACCAAAGAGAACTGGATCCACGTGAAGTCCTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTATGCCATGGCAGACGTaGGAGACAGATTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGMPWQT*ETDFVF
Trigger: GAAGACAAAATCTGTCTCCCACGTCTGCCATGGCAT...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTTTTAAAAGAATAGCTTaGCCTGGCTGGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGFKRIA*PGWWLT
Trigger: CGTGAGCCACCAGCCAGGCCAAGCTATTCTTTTAAA...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCTACTCACGATCTCATTaGGGACATTGTCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFYSRSH*GHCPQP
Trigger: GGGCTGAGGACAATGTCCTCAATGAGATCGTGAGTA...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp TTCTATCTCCTGAGCCCAAACAGGGCTCAAGTTCACTTGGGATATGACATAGACCTCGCCCGGTTTTGTTaGCCCACTTTATCAGCATCG +
Preference number: 4 (lower is better)
Translates to: FYLLSPNRAQVHLGYDIDLARFC*PTLSAS
Trigger: CGATGCTGATAAAGTGGGTCAACAAAACCGGGCGAG...GTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGGAGATAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp ATGCCAAGTGCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTGATGTTGGAACAGATAACCAGAAGTaGGCCGGGCCATCTACTCCT +
Preference number: 4 (lower is better)
Translates to: MPSAVKSYRMFHPLGDVGTDNQK*AGPSTP
Trigger: AGGAGTAGATGGCCCGGCTCACTTCTGGTTATCTGT...TCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGCACTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTACGGACTGGCACCTTCTaGGCCCTGAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: KTPGMTTCINDPSMTEILRTGTF*ALRLSV
Trigger: GACGCTCAGCCTCAGGGCTCAGAAGGTGCCAGTCCG...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTAGACCTTTCAGCTTCTaGCGGTTCCAGCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTRPFSF*RFQQML
Trigger: GAGCATCTGCTGGAACCGGCAGAAGCTGAAAGGTCT...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATAAAGGGCACCAAGTCTaGAAAGTCATCGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHKGHQV*KVIEAL
Trigger: CAGTGCTTCGATGACTTTGCAGACTTGGTGCCCTTT...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCCCGTCTTCTGAGATATaGTGTCCAGGTGGACACAAT +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTPSSEI*CPGGHN
Trigger: ATTGTGTCCACCTGGACACCATATCTCAGAAGACGG...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR CCA 90 bp ATGCCAAGTGCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTGATGTTGGAACCTGTTGGCTCTGCTaGCTCCTGGACTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: MPSAVKSYRMFHPLGDVGTCWLC*LLDFHF
Trigger: GAAATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGT...TCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGCACTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTACCTGTTGGCTCTGCTaGCTCCTGGACTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTTCWLC*LLDFHF
Trigger: GAAATGGAAGTCCAGGAGCCAGCAGAGCCAACAGGT...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGTCTCAGAGTCTCAGTaGGATCACCTTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCVSESQ*DHLHLL
Trigger: CAGCAAATGAAGGTGATCCCACTGAGACTCTGAGAC...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTGTCTCAGAGTCTCAGTaGGATCACCTTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFVSESQ*DHLHLL
Trigger: CAGCAAATGAAGGTGATCCCACTGAGACTCTGAGAC...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTCCTCAATCTTCTGCTTaGCAAGTCTCTCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTPQSSA*QVSLPA
Trigger: CGCTGGGAGAGAGACTTGCCAAGCAGAAGATTGAGG...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCCCAGAGCTCAACAAGTaGTCCTCAATCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTPELNK*SSIFCL
Trigger: CAAGCAGAAGATTGAGGACCACTTGTTGAGCTCTGG...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp TTCTATCTCCTGAGCCCAAACAGGGCTCAAGTTCACTTGGGATATGACATAGACTCCCAGCTATTTGGATaGCTGAGGTGGGAGAATCGC +
Preference number: 4 (lower is better)
Translates to: FYLLSPNRAQVHLGYDIDSQLFG*LRWENR
Trigger: GCGATTCTCCCACCTCAGCCATCCAAATAGCTGGGA...GTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGGAGATAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCATCTCTACCGTCTTCTaGGATATGGTGTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFISTVF*DMVSRW
Trigger: CCACCTGGACACCATATCTCAGAAGACGGTAGAGAT...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR TCA 90 bp TCTGCAAAGTCATCGAAGCACTGTCTCAGAGTCTCAGTGGGATCACCTTCATTTTACTCACGATCTCATTaGGGACATTGTCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SAKSSKHCLRVSVGSPSFYSRSH*GHCPQP
Trigger: GGGCTGAGGACAATGTCCTCAATGAGATCGTGAGTA...AAATGAAGGTGATCCCACTGAGACTCTGAGACAGTGCTTCGATGACTTTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR TCA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGAAGGTCTGACTTCCTaGAGAGAATCACACTTAGGA +
Preference number: 4 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCEGLTS*RESHLG
Trigger: TCCTAAGTGTGATTCTCTTCAGGAAGTCAGACCTTC...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp ATGCCAAGTGCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTGATGTTGGACCAGTACCGGTCATGTaGCAATTGTGGCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: MPSAVKSYRMFHPLGDVGPVPVM*QLWHFP
Trigger: AGGAAAGTGCCACAATTGTCACATGACCGGTACTGG...TCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGCACTTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTCCCTATTGTTATGTGTaGTCTAACCCATCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCPYCYV*SNPSAS
Trigger: AGAGGCAGATGGGTTAGATCACACATAACAATAGGG...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp ATGCCAAGTGCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTGATGTTGGATTGTCTTCTATCTCCTaGGCCCAAACAGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: MPSAVKSYRMFHPLGDVGLSSIS*AQTGLK
Trigger: CTTGAGCCCTGTTTGGGCTCAGGAGATAGAAGACAA...TCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGCACTTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTAGTCCTGTCCATATTTaGAGGAGATGCAATCTCTAC +
Preference number: 4 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGSPVHI*RRCNLY
Trigger: GTAGAGATTGCATCTCCTGCAAATATGGACAGGACT...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTCTGAATCACACCTGGTaGAGCGCAAGCAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTLNHTW*SASRKG
Trigger: TCCTTTTCTGCTTGCGCTGCACCAGGTGTGATTCAG...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCCTGAATCACACCTGGTaGAGCGCAAGCAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFLNHTW*SASRKG
Trigger: TCCTTTTCTGCTTGCGCTGCACCAGGTGTGATTCAG...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTTGTTTCTGGTCGTGGTaGAGGGACTTAGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTCFWSW*RDLAPL
Trigger: AAGTGGAGCTAAGTCCCTGCACCACGACCAGAAACA...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp ATGCCAAGTGCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTGATGTTGGATGGTCCTCAATCTTCTaGTTGGCAAGTCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: MPSAVKSYRMFHPLGDVGWSSIF*LASLSP
Trigger: GGGAGAGAGACTTGCCAAGCAGAAGATTGAGGACCA...TCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGCACTTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCTGGTCCTCAATCTTCTaGTTGGCAAGTCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFWSSIF*LASLSP
Trigger: GGGAGAGAGACTTGCCAAGCAGAAGATTGAGGACCA...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTGTCCTGTGTCACATaGTATTTGGCCTGGGGATAT +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFLSCVT*YLAWGY
Trigger: ATATCCCCAGGCCAAATAGCATGTGACACAGGACAG...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCAGTCTCTCAGGCCCGTaGGTTTCAGCCCTTAAAGTA +
Preference number: 4 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFSLSGP*VSALKV
Trigger: TACTTTAAGGGCTGAAACCCACGGGCCTGAGAGACT...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGCTAGGTCTTGTTaGGTGATCAGAGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTGARSC*VIRADS
Trigger: TGAGTCTGCTCTGATCACCCAACAAGACCTAGCTCC...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR CCA 90 bp TCTGCAAAGTCATCGAAGCACTGTCTCAGAGTCTCAGTGGGATCACCTTCATTTCACCTGAATCACACCTaGTGCAGCGCAAGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SAKSSKHCLRVSVGSPSFHLNHT*CSASRK
Trigger: TTTTCTGCTTGCGCTGCACCAGGTGTGATTCAGGTG...AAATGAAGGTGATCCCACTGAGACTCTGAGACAGTGCTTCGATGACTTTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCCAGAGCTCAACAAGTaGTCCTCAATCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFPELNK*SSIFCL
Trigger: CAAGCAGAAGATTGAGGACCACTTGTTGAGCTCTGG...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTCTGGGTGATGTTGGATaGGAGAGTTTCTTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTILGDVG*ESFFQY
Trigger: GTACTGGAAGAAACTCTCCCATCCAACATCACCCAG...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTGGGTGATGTTGGATaGGAGAGTTTCTTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFLGDVG*ESFFQY
Trigger: GTACTGGAAGAAACTCTCCCATCCAACATCACCCAG...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTACACAGGACTTCACGTaGATCCAGTTCTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTITQDFT*IQFSLV
Trigger: GACCAAAGAGAACTGGATCCACGTGAAGTCCTGTGT...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATTGGAGAAGGGTTTGCTaGAAAGAGGCTGAAATGGTT +
Preference number: 4 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHWRRVC*KEAEMV
Trigger: AACCATTTCAGCCTCTTTCCAGCAAACCCTTCTCCA...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGAAGGTCTGACTTCCTaGAGAGAATCACACTTAGGA +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTIEGLTS*RESHLG
Trigger: TCCTAAGTGTGATTCTCTTCAGGAAGTCAGACCTTC...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTCATATTTGCAGGAGATaGAATCTCTACCGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCHICRR*NLYRLL
Trigger: CAGAAGACGGTAGAGATTGCATCTCCTGCAAATATG...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCCATATTTGCAGGAGATaGAATCTCTACCGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTHICRR*NLYRLL
Trigger: CAGAAGACGGTAGAGATTGCATCTCCTGCAAATATG...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATTCCAGTGAGTaGTATAGTCCTGTCCATATT +
Preference number: 4 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTGHSSE*YSPVHI
Trigger: AATATGGACAGGACTATAGCACTCACTGGAATGACC...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TTCTATCTCCTGAGCCCAAACAGGGCTCAAGTTCACTTGGGATATGACATAGACGGCCCCTGTAGAAGTTaGCAATCATTGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: FYLLSPNRAQVHLGYDIDGPCRS*QSLKPK
Trigger: CTTTGGCTTCAATGATTGGCAACTTCTACAGGGGCC...GTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGGAGATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp CCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTATGGAGACATGTTGACACCTGTTaGCTCTGCTGGCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PGMTTCINDPSMTEILWRHVDTC*LCWLLD
Trigger: GTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATG...TCTCCATAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATATCACACTTAGGACATaGCAGAGTCTGCATTACCTT +
Preference number: 4 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHITLRT*QSLHYL
Trigger: AAGGTAATGCAGACTCTGCCATGTCCTAAGTGTGAT...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp CCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTATGGAGACATCTGAGGGAGGGCTaGAACCCAGACAGTGACATC +
Preference number: 4 (lower is better)
Translates to: PGMTTCINDPSMTEILWRHLREG*NPDSDI
Trigger: GATGTCACTGTCTGGGTTCCAGCCCTCCCTCAGATG...TCTCCATAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGGATCCAGTTCTCTTTaGTCCCGACTCATATGTAAA +
Preference number: 4 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHGSSSL*SRLICK
Trigger: TTTACATATGAGTCGGGACCAAAGAGAACTGGATCC...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGAGTCCTGTCCATATTTaGAGGAGATGCAATCTCTAC +
Preference number: 4 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVSPVHI*RRCNLY
Trigger: GTAGAGATTGCATCTCCTGCAAATATGGACAGGACT...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTCCTGGAATGACTACCTaGATAAATGATCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTIPGMTT*INDPSM
Trigger: CATGGAAGGATCATTTATGCAGGTAGTCATTCCAGG...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCATCACACTTAGGACATaGCAGAGTCTGCATTACCTT +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFITLRT*QSLHYL
Trigger: AAGGTAATGCAGACTCTGCCATGTCCTAAGTGTGAT...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CCA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCAACGACTGTGTAGATaGATCTTACAATGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFQRLCR*ILQCSP
Trigger: TGGGCTACATTGTAAGATCCATCTACACAGTCGTTG...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp ACAGCCACAATCAAGACTACGGCTGCAACTGTGACTCCTATGATGATGCCTGATTACCTTCTAGATACATaGACTTTCCAGAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: TATIKTTAATVTPMMMPDYLLDT*TFQSST
Trigger: TGTTGAGCTCTGGAAAGTTCATGTATCTAGAAGGTA...ATCAGGCATCATCATAGGAGTCACAGTTGCAGCCGTAGTCTTGATTGTGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR GCA 90 bp ATGCCAAGTGCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTGATGTTGGACATATTTGCAGGAGATaGAATCTCTACCGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: MPSAVKSYRMFHPLGDVGHICRR*NLYRLL
Trigger: CAGAAGACGGTAGAGATTGCATCTCCTGCAAATATG...TCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGCACTTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCAGTCCTGTCCATATTTaGAGGAGATGCAATCTCTAC +
Preference number: 4 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFSPVHI*RRCNLY
Trigger: GTAGAGATTGCATCTCCTGCAAATATGGACAGGACT...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp ATGCCAAGTGCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTGATGTTGGAGGTCATTCCAGTGAGTaGTATAGTCCTGTCCATATT +
Preference number: 4 (lower is better)
Translates to: MPSAVKSYRMFHPLGDVGGHSSE*YSPVHI
Trigger: AATATGGACAGGACTATAGCACTCACTGGAATGACC...TCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGCACTTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGTCATTCCAGTGAGTaGTATAGTCCTGTCCATATT +
Preference number: 4 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTGHSSE*YSPVHI
Trigger: AATATGGACAGGACTATAGCACTCACTGGAATGACC...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTAATCAAGACTACGGCTaGAACTGTGACTCCTATGAT +
Preference number: 4 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTNQDYG*NCDSYD
Trigger: ATCATAGGAGTCACAGTTGCAGCCGTAGTCTTGATT...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR GCA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCAATCAAGACTACGGCTaGAACTGTGACTCCTATGAT +
Preference number: 4 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFNQDYG*NCDSYD
Trigger: ATCATAGGAGTCACAGTTGCAGCCGTAGTCTTGATT...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTAGTGCCTTCTTCGCACTaGCACACTGTGTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: KTPGMTTCINDPSMTEILVPSSH*HTVFLV
Trigger: GACCAGAAACACAGTGTGTCAGTGCGAAGAAGGCAC...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCTACCTTCTAGATACATaGACTTTCCAGAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFYLLDT*TFQSST
Trigger: TGTTGAGCTCTGGAAAGTTCATGTATCTAGAAGGTA...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR TCA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTAGTTCACTTGGGATATaGCATAGACCCTATTGTTAT +
Preference number: 4 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTISSLGI*HRPYCY
Trigger: ATAACAATAGGGTCTATGTCATATCCCAAGTGAACT...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTACAGCCTGTCCATAGATaGGGGCTATGGGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: KTPGMTTCINDPSMTEILQPVHR*GLWVQM
Trigger: CATTTGCACCCATAGCCCCCATCTATGGACAGGCTG...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276431.9
3UTR CAA 72 bp TTCTATCTCCTGAGCCCAAACAGGGCTCAAGTTCACTaGGGATATGACATAGACCCTATTGTTATGTGTGAT +
Preference number: 4 (lower is better)
Translates to: FYLLSPNRAQVH*GYDIDPIVMCD
Trigger: ATCACACATAACAATAGGGTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGGAGATAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTAGGATGTTCCATCCACTaGGTGATGTTGGATGGGAGA +
Preference number: 4 (lower is better)
Translates to: KTPGMTTCINDPSMTEILGCSIH*VMLDGR
Trigger: TCTCCCATCCAACATCACCCAGTGGATGGAACATCC...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp CCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTATGGAGATACGCACAAACGGAATaGTCCAGACATTTCCATAGT +
Preference number: 4 (lower is better)
Translates to: PGMTTCINDPSMTEILWRYAQTE*SRHFHS
Trigger: ACTATGGAAATGTCTGGATCATTCCGTTTGTGCGTA...TCTCCATAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTAATAGTGAGCCAAGATTaGACCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KTPGMTTCINDPSMTEILIVSQD*TIALQP
Trigger: AGGCTGGAGTGCAATGGTGCAATCTTGGCTCACTAT...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp CCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTATGGAGATACCTTCTAGATACATaGACTTTCCAGAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: PGMTTCINDPSMTEILWRYLLDT*TFQSST
Trigger: TGTTGAGCTCTGGAAAGTTCATGTATCTAGAAGGTA...TCTCCATAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR TCA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTAACAGACACAACAGTCTaGATGTGTGATCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: KTPGMTTCINDPSMTEILTDTTV*MCDLQA
Trigger: TGCCTGAAGATCACACATTCAGACTGTTGTGTCTGT...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR GCA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTAAATCAAGACTACGGCTaGAACTGTGACTCCTATGAT +
Preference number: 4 (lower is better)
Translates to: KTPGMTTCINDPSMTEILNQDYG*NCDSYD
Trigger: ATCATAGGAGTCACAGTTGCAGCCGTAGTCTTGATT...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CCA 90 bp CCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTATGGAGAAAGACCAAAAACTCCTaGAATGACTACCTGCATAAA +
Preference number: 4 (lower is better)
Translates to: PGMTTCINDPSMTEILWRKTKNS*NDYLHK
Trigger: TTTATGCAGGTAGTCATTCCAGGAGTTTTTGGTCTT...TCTCCATAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CAA 90 bp CTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGACTTCGGCGTTCTGTCCCCGTaGTTCCATGGCGGTAGGGAA +
Preference number: 5 (lower is better)
Translates to: LPGGQHVDTCWLCWLLDFGVLSP*FHGGRE
Trigger: TTCCCTACCGCCATGGAACAACGGGGACAGAACGCC...GAAGTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CAA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATTTGTGGGCGCAGAGATaGCGGGGTTCTCCGGCCGCG +
Preference number: 5 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHLWAQR*RGSPAA
Trigger: CGCGGCCGGAGAACCCCGCAATCTCTGCGCCCACAA...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTTTGTGGGCGCAGAGATaGCGGGGTTCTCCGGCCGCG +
Preference number: 5 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTILWAQR*RGSPAA
Trigger: CGCGGCCGGAGAACCCCGCAATCTCTGCGCCCACAA...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp TCTGACTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGGCCACCTTTATCTCATaGTCCATGAGGCCCAACTTC +
Preference number: 5 (lower is better)
Translates to: SDSPGDNMLTPVGSAGSWATFIS*SMRPNF
Trigger: GAAGTTGGGCCTCATGGACAATGAGATAAAGGTGGC...CCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CAA 90 bp TCTGACTCCCCGGGGGACAACATGTTGACACCTGTTGGCTCTGCTGGCTCCTGGTCTCGCCCGGTTTTGTaGACCCACTTTATCAGCATC +
Preference number: 5 (lower is better)
Translates to: SDSPGDNMLTPVGSAGSWSRPVL*THFISI
Trigger: GATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGA...CCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CAA 90 bp GGGAGTCTGAGGTGGGCAGACTGCTTGAGTCCAGGAATTCGAGACCACCCTGAGTCCTCAATCTTCTGCTaGGCAAGTCTCTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: GSLRWADCLSPGIRDHPESSIFC*ASLSPS
Trigger: GCTGGGAGAGAGACTTGCCAAGCAGAAGATTGAGGA...CTCAGGGTGGTCTCGAATTCCTGGACTCAAGCAGTCTGCCCACCTCAGACTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CAA 90 bp GGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTGGCGTTCTGTCCCCGTaGTTCCATGGCGGTAGGGAA +
Preference number: 5 (lower is better)
Translates to: GCSIHWVMLDGRVSSSTGGVLSP*FHGGRE
Trigger: TTCCCTACCGCCATGGAACAACGGGGACAGAACGCC...ACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp CACTTTATCAGCATCGTGTACAAGGTGTCCCTGTGGCCCGCTGCCTCAGCTTTACCGGGGGACAACATGTaGACACCTGTTGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: HFISIVYKVSLWPAASALPGDNM*TPVGSA
Trigger: AGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGG...TAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CAA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGGCGTTCTGTCCCCGTaGTTCCATGGCGGTAGGGAA +
Preference number: 5 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCGVLSP*FHGGRE
Trigger: TTCCCTACCGCCATGGAACAACGGGGACAGAACGCC...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCTGGACCTCTTTTGTaGTGGGGCCGCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVAGPLL*WGRSLL
Trigger: CAGCAGAGAGCGGCCCCACAACAAAAGAGGTCCAGC...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR CAA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCGGGGCTGGACCTCTTTaGTTGTGGGGCCGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFGAGPL*LWGRSL
Trigger: CAGAGAGCGGCCCCACAACAAAAGAGGTCCAGCCCC...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR CAA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCCCGGGGGACAACATGTaGACACCTGTTGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTPGDNM*TPVGSA
Trigger: AGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGG...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp CACTTTATCAGCATCGTGTACAAGGTGTCCCTGTGGCCCGCTGCCTCAGCTTTAGCATCTCGCCCGGTTTaGTTGACCCACTTTATCAGC +
Preference number: 5 (lower is better)
Translates to: HFISIVYKVSLWPAASALASRPV*LTHFIS
Trigger: GCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGC...TAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATAAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CAA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTCATCGTCGGTGTATTTaGTGGGCGCAGAGATTGCGG +
Preference number: 5 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFHRRCI*WAQRLR
Trigger: CCGCAATCTCTGCGCCCACAAAATACACCGACGATG...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCGCTGGACCTCTTTTGTaGTGGGGCCGCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFAGPLL*WGRSLL
Trigger: CAGCAGAGAGCGGCCCCACAACAAAAGAGGTCCAGC...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000347739.3
CDS-3UTR CAA 90 bp CCACTTTATCAGCATCGTGTACAAGGTGTCCCTGTGGCCCGCTGCCTCAGCTTTATACTCACGATCTCATaGAGGACATTGTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PLYQHRVQGVPVARCLSFILTIS*RTLSSA
Trigger: GGCTGAGGACAATGTCCTCAATGAGATCGTGAGTAT...AAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATAAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CAA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTCCGGGGGACAACATGTaGACACCTGTTGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTIPGDNM*TPVGSA
Trigger: AGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGG...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp GGTGTGGACAGAGGCATCTCGCCCGGTTTTGTTGACCCACTTTATCAGCATCGTATCCACTGGGTGATGTaGGATGGGAGAGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: GVDRGISPGFVDPLYQHRIHWVM*DGRVSS
Trigger: GGAAGAAACTCTCCCATCCAACATCACCCAGTGGAT...ACGATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS CCA 90 bp TTGTTCCATGGCGGTAGGGAACGCTCTTATAGTCTCTCAGGCCCGTaGGTTTCAGCCCTTAAAGTAGATCGGGCATCGTCGGTGTATTTT +
Preference number: 5 (lower is better)
Translates to: LFHGGRERSYSLSGP*VSALKVDRASSVYF
Trigger: AAAATACACCGACGATGCCCGATCTACTTTAAGGGCTGAAACCCACGGGCCTGAGAGACTATAAGAGCGTTCCCTACCGCCATGGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000519028.1
ENST00000523504.5
CDS CCA 90 bp GATACCATCCTAGCAGGAAGGCTCCAGAAGGACAGAGCCTTGAACTaGAGGCACCCAATGCCTCTCTGTGGAATAAAGAACAAGGAAGTG +
Preference number: 5 (lower is better)
Translates to: DTILAGRLQKDRALN*RHPMPLCGIKNKEV
Trigger: CACTTCCTTGTTCTTTATTCCACAGAGAGGCATTGGGTGCCTCCAGTTCAAGGCTCTGTCCTTCTGGAGCCTTCCTGCTAGGATGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519028.1
CDS-3UTR CAA 90 bp ACAGCCACAATCAAGACTACGGCTGCAACTGTGACTCCTATGATGATGCCTGATCATCGTCGGTGTATTTaGTGGGCGCAGAGATTGCGG +
Preference number: 5 (lower is better)
Translates to: TATIKTTAATVTPMMMPDHRRCI*WAQRLR
Trigger: CCGCAATCTCTGCGCCCACAAAATACACCGACGATG...ATCAGGCATCATCATAGGAGTCACAGTTGCAGCCGTAGTCTTGATTGTGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CAA 90 bp TTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTTCCTCAATCTTCTGCTaGGCAAGTCTCTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: FHPLGDVGWESFFQYRSCSSIFC*ASLSPS
Trigger: GCTGGGAGAGAGACTTGCCAAGCAGAAGATTGAGGA...ACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp CACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTAGGTGGGCAGACTGCTaGAGTCCAGGAATTCGAGAC +
Preference number: 5 (lower is better)
Translates to: HWVMLDGRVSSSTGHVTIRWADC*SPGIRD
Trigger: GTCTCGAATTCCTGGACTCAAGCAGTCTGCCCACCT...AATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS GCA 90 bp CACACCTGGTGCAGCGCAAGCAGAAAAGGAGGTCATTCCAGTGAGTaGTATAGTCCTGTCCATATTTGCAGGAGATGCAATCTCTACCGT +
Preference number: 5 (lower is better)
Translates to: HTWCSASRKGGHSSE*YSPVHICRRCNLYR
Trigger: ACGGTAGAGATTGCATCTCCTGCAAATATGGACAGGACTATAGCACTCACTGGAATGACCTCCTTTTCTGCTTGCGCTGCACCAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000518531.5
ENST00000519910.1
ENST00000523504.5
CDS-3UTR CAA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCCATCGTCGGTGTATTTaGTGGGCGCAGAGATTGCGG +
Preference number: 5 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFHRRCI*WAQRLR
Trigger: CCGCAATCTCTGCGCCCACAAAATACACCGACGATG...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTGCCACCTTTATCTCATaGTCCATGAGGCCCAACTTC +
Preference number: 5 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFATFIS*SMRPNF
Trigger: GAAGTTGGGCCTCATGGACAATGAGATAAAGGTGGC...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp CGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTATCCACTGGGTGATGTaGGATGGGAGAGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RSCDNCGTFLLTGVQLGFIHWVM*DGRVSS
Trigger: GGAAGAAACTCTCCCATCCAACATCACCCAGTGGAT...AAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCATCCACTGGGTGATGTaGGATGGGAGAGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTIHWVM*DGRVSS
Trigger: GGAAGAAACTCTCCCATCCAACATCACCCAGTGGAT...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp TGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATATACTCACGATCTCATaGAGGACATTGTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: CSIHWVMLDGRVSSSTGHILTIS*RTLSSA
Trigger: GGCTGAGGACAATGTCCTCAATGAGATCGTGAGTAT...ATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp TGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGTCTCGCCCGGTTTTGTaGACCCACTTTATCAGCATC +
Preference number: 5 (lower is better)
Translates to: WVMLDGRVSSSTGHVTIVSRPVL*THFISI
Trigger: GATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGA...CACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTGCATCTCGCCCGGTTTaGTTGACCCACTTTATCAGC +
Preference number: 5 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTASRPV*LTHFIS
Trigger: GCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGC...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp TCTGCAAAGTCATCGAAGCACTGTCTCAGAGTCTCAGTGGGATCACCTTCATTTTCCTCAATCTTCTGCTaGGCAAGTCTCTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SAKSSKHCLRVSVGSPSFSSIFC*ASLSPS
Trigger: GCTGGGAGAGAGACTTGCCAAGCAGAAGATTGAGGA...AAATGAAGGTGATCCCACTGAGACTCTGAGACAGTGCTTCGATGACTTTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CAA 90 bp CAGGGTGTGGACAGAGGCATCTCGCCCGGTTTTGTTGACCCACTTTATCAGCATATGATGCCTGATTCTTaGTGGACACATTCGATGTCA +
Preference number: 5 (lower is better)
Translates to: QGVDRGISPGFVDPLYQHMMPDS*WTHSMS
Trigger: TGACATCGAATGTGTCCACAAAGAATCAGGCATCAT...ATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS-3UTR CAA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTAGGGGCTGGACCTCTTTaGTTGTGGGGCCGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: KTPGMTTCINDPSMTEILGAGPL*LWGRSL
Trigger: CAGAGAGCGGCCCCACAACAAAAGAGGTCCAGCCCC...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CAA 90 bp ATGCCAAGTGCAGTGAAAAGTTACAGGATGTTCCATCCACTGGGTGATGTTGGATCTCGCCCGGTTTTGTaGACCCACTTTATCAGCATC +
Preference number: 5 (lower is better)
Translates to: MPSAVKSYRMFHPLGDVGSRPVL*THFISI
Trigger: GATGCTGATAAAGTGGGTCAACAAAACCGGGCGAGA...TCCAACATCACCCAGTGGATGGAACATCCTGTAACTTTTCACTGCACTTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp ACAGGATGTTCCATCCACTGGGTGATGTTGGATGGGAGAGTTTCTTCCAGTACCTGTGTCACATGCTATTaGGCCTGGGGATATAGCAAA +
Preference number: 5 (lower is better)
Translates to: TGCSIHWVMLDGRVSSSTCVTCY*AWGYSK
Trigger: TTTGCTATATCCCCAGGCCAAATAGCATGTGACACA...GGTACTGGAAGAAACTCTCCCATCCAACATCACCCAGTGGATGGAACATCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CAA 90 bp TCATGTGACAATTGTGGCACTTTCCTACTGACTGGAGTCCAGTTGGGCTTTTTCATACTCACGATCTCATaGAGGACATTGTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: SCDNCGTFLLTGVQLGFFILTIS*RTLSSA
Trigger: GGCTGAGGACAATGTCCTCAATGAGATCGTGAGTAT...GAAAAAGCCCAACTGGACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp GTTGGATGGGAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCATGATGCCTGATTCTTaGTGGACACATTCGATGTCA +
Preference number: 5 (lower is better)
Translates to: VGWESFFQYRSCDNCGTFMMPDS*WTHSMS
Trigger: TGACATCGAATGTGTCCACAAAGAATCAGGCATCAT...GAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347739.3
ENST00000523504.5
CDS-3UTR CAA 90 bp AAAACTCCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTAGCATCTCGCCCGGTTTaGTTGACCCACTTTATCAGC +
Preference number: 5 (lower is better)
Translates to: KTPGMTTCINDPSMTEILASRPV*LTHFIS
Trigger: GCTGATAAAGTGGGTCAACAAAACCGGGCGAGATGC...TAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CAA 90 bp GAGAGTTTCTTCCAGTACCGGTCATGTGACAATTGTGGCACTTTCCTACTGACTCATATACTTGTAAGGTaGTCCAGTTCAAAAGACTGG +
Preference number: 5 (lower is better)
Translates to: ESFFQYRSCDNCGTFLLTHILVR*SSSKDW
Trigger: CCAGTCTTTTGAACTGGACAACCTTACAAGTATATG...AGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS-3UTR CAA 90 bp CCTGGAATGACTACCTGCATAAATGATCCTTCCATGACTGAAATACTATGGAGAAGGGCTCAAGTTCACTaGGGATATGACATAGACCCT +
Preference number: 5 (lower is better)
Translates to: PGMTTCINDPSMTEILWRRAQVH*GYDIDP
Trigger: AGGGTCTATGTCATATCCCAAGTGAACTTGAGCCCT...TCTCCATAGTATTTCAGTCATGGAAGGATCATTTATGCAGGTAGTCATTCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276431.9
CDS TCA 72 bp GGGCCGCTCTCTGCTGGGGAGCTAGGTCTTGTTGGGTaGTCAGAGCAGACTCAGCTGAGACCAACAGCAGGA +
Preference number: 6 (lower is better)
Translates to: GPLSAGELGLVG*SEQTQLRPTAG
Trigger: TCCTGCTGTTGGTCTCAGCTGAGTCTGCTCTGATCACCCAACAAGACCTAGCTCCCCAGCAGAGAGCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000519028.1
CDS CCA 72 bp GGGCTGGACCTCTTTTGTTGTGGGGCCGCTCTCTGCTaGGGAGCTAGGTCTTGTTGGGTGATCAGAGCAGAC +
Preference number: 6 (lower is better)
Translates to: GLDLFCCGAALC*GARSCWVIRAD
Trigger: GTCTGCTCTGATCACCCAACAAGACCTAGCTCCCCAGCAGAGAGCGGCCCCACAACAAAAGAGGTCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000519028.1
ENST00000519910.1
CDS TCA 72 bp GGGCCGCTCTCTGCTGGGGAGCTAGGTCTTGTTGGGTaGTCAGAGCAGACTCAGCTGAGACCTGCATCTCAT +
Preference number: 6 (lower is better)
Translates to: GPLSAGELGLVG*SEQTQLRPASH
Trigger: ATGAGATGCAGGTCTCAGCTGAGTCTGCTCTGATCACCCAACAAGACCTAGCTCCCCAGCAGAGAGCGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519910.1
CDS GCA 72 bp TCGGGCATCGTCGGTGTATTTTGTGGGCGCAGAGATTaGGGGGTTCTCCGGCCGCGTGCTGATTTATGTGTC +
Preference number: 6 (lower is better)
Translates to: SGIVGVFCGRRD*GVLRPRADLCV
Trigger: GACACATAAATCAGCACGCGGCCGGAGAACCCCGCAATCTCTGCGCCCACAAAATACACCGACGATGCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276431.9
ENST00000523504.5
CDS CCA 72 bp GGCGGTAGGGAACGCTCTTATAGTCTCTCAGGCCCGTaGGTTTCAGCCCTTAAAGTAGATCGGGCATCGTCG +
Preference number: 6 (lower is better)
Translates to: GGRERSYSLSGP*VSALKVDRASS
Trigger: CGACGATGCCCGATCTACTTTAAGGGCTGAAACCCACGGGCCTGAGAGACTATAAGAGCGTTCCCTACCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000519028.1
ENST00000523504.5
CDS TCA 72 bp TCCATATTTGCAGGAGATGCAATCTCTACCGTCTTCTaGGATATGGTGTCCAACAGCAGGACCGCGGCGACA +
Preference number: 6 (lower is better)
Translates to: SIFAGDAISTVF*DMVSNSRTAAT
Trigger: TGTCGCCGCGGTCCTGCTGTTGGACACCATATCTCAGAAGACGGTAGAGATTGCATCTCCTGCAAATATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523504.5
CDS GCA 72 bp TGCAGCGCAAGCAGAAAAGGAGGTCATTCCAGTGAGTaGTATAGTCCTGTCCATATTTGCAGGAGATGCAAT +
Preference number: 6 (lower is better)
Translates to: CSASRKGGHSSE*YSPVHICRRCN
Trigger: ATTGCATCTCCTGCAAATATGGACAGGACTATAGCACTCACTGGAATGACCTCCTTTTCTGCTTGCGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276431.9
ENST00000347739.3
ENST00000518531.5
ENST00000519910.1
ENST00000523504.5