RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFAIP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000118503

Ensembl transcript IDs: ENST00000237289.8, ENST00000420009.5, ENST00000421450.1, ENST00000433680.1, ENST00000612899.5, ENST00000614035.4, ENST00000615468.4, ENST00000619035.4, ENST00000620204.3, ENST00000621150.3

Found 848 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTCACCCCGGTGGGCCCCAGGGCCCATCCTCTGGTTGGGATGCTaGCACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTC +
Preference number: 1 (lower is better)
Translates to: GSPRWAPGPILWLGC*HSMQSSSLRQARMF
Trigger: GAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGATGGGCCCTGGGGCCCACCGGGGTGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR GCA 90 bp GGTGGGCCCCAGGGCCCATCCTCTGGTTGGGATGCTGACACTCCATaGAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: GGPQGPSSGWDADTP*RAPRCGRPGCSCRR
Trigger: CCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGATGGGCCCTGGGGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR GCA 90 bp GACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTaGAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTGCTTTGTGTGG +
Preference number: 1 (lower is better)
Translates to: DTPCRAPRCGRPGCS*RRPGRTWALRCFVW
Trigger: CCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR GCA 90 bp CCATCCTCTGGTTGGGATGCTGACACTCCATGCAGAGCTCCTCGCTaGGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGG +
Preference number: 1 (lower is better)
Translates to: PSSGWDADTPCRAPR*GRPGCSCRRPGRTW
Trigger: CCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CCA 90 bp CGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTaGGCCTTGAGGTGCTTTGTGTGGTTCGAGGCACATCTCTGCGCT +
Preference number: 1 (lower is better)
Translates to: RCGRPGCSCRRPGRT*ALRCFVWFEAHLCA
Trigger: AGCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CCA 90 bp GAGGCAGGCTTGGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTaGGGCGTGGCTGGCGTGAAGTTGCCGGGCGTTGTGGCAACGTTC +
Preference number: 1 (lower is better)
Translates to: EAGLALPGIQVPCVV*GVAGVKLPGVVATF
Trigger: GAACGTTGCCACAACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR TCA 90 bp GCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGGGCCTTaGGGTGCTTTGTGTGGTTCGAGGCACATCTCTGCGCTGGCTCGA +
Preference number: 1 (lower is better)
Translates to: AGQDVLAGGPGALGP*GALCGSRHISALAR
Trigger: TCGAGCCAGCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR GCA 90 bp CCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTaGTTTGTGTGGTTCGAGGCACATCTCTGCGCTGGCTCGATCTCA +
Preference number: 1 (lower is better)
Translates to: PGCSCRRPGRTWALR*FVWFEAHLCAGSIS
Trigger: TGAGATCGAGCCAGCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CCA 90 bp GGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTaGCGTGAAGTTGCCGGGCGTTGTGGCAACGTTCACAAAATCCGT +
Preference number: 1 (lower is better)
Translates to: GTSRDPSALCGLGRG*REVAGRCGNVHKIR
Trigger: ACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR CCA 90 bp CTTCCAAGGGTGCCGCATTCCCTCCCCAGGCACGGAATGGTGTTCTaGAACCTGGACGCTGTGGGACTGACTTTCCCTGAGGCAGCAGCA +
Preference number: 1 (lower is better)
Translates to: LPRVPHSLPRHGMVF*NLDAVGLTFPEAAA
Trigger: TGCTGCTGCCTCAGGGAAAGTCAGTCCCACAGCGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGAGGGAATGCGGCACCCTTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR TCA 90 bp TTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGTaGAGTTGCCGGGCGTTGTGGCAACGTTCACAAAATCCGTTGTGC +
Preference number: 1 (lower is better)
Translates to: FPGSKCLVWSGAWLA*SCRALWQRSQNPLC
Trigger: GCACAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR CCA 90 bp TCTTGCAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTGCTTTGTGTaGTTCGAGGCACATCTCTGCGCTGGCTCGATCTCAGTTGCTCTT +
Preference number: 1 (lower is better)
Translates to: SCRRPGRTWALRCFV*FEAHLCAGSISVAL
Trigger: AAGAGCAACTGAGATCGAGCCAGCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CCA 90 bp CTGCAGATCCCATTAAATGTCCTGGTAACATCCTGGAGGCAGGCTTaGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGG +
Preference number: 1 (lower is better)
Translates to: LQIPLNVLVTSWRQA*HFPGSKCLVWSGAW
Trigger: CCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGATGTTACCAGGACATTTAATGGGATCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR GCA 90 bp CCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTaGTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACATCATC +
Preference number: 1 (lower is better)
Translates to: PVPAHLPSPKKFLAS*LVGEEEPWAESDII
Trigger: GATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CCA 90 bp GACATCATCCCTTGCCAGTTACAAGCTTTGCTTTCTAAGGCCACCTaGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGCACCAC +
Preference number: 1 (lower is better)
Translates to: DIIPCQLQALLSKAT*EHSRVTKPEHRGHH
Trigger: GTGGTGCCCACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGGGATGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CCA 90 bp GTGAACATGTTCAGTCTCAGCAGCCTCAGAATCACAGTCCATGGATaGTTCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGG +
Preference number: 1 (lower is better)
Translates to: VNMFSLSSLRITVHG*FCISAGSSGKEPGR
Trigger: CCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGCTGCTGAGACTGAACATGTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTaGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGC +
Preference number: 1 (lower is better)
Translates to: YLSSPAQTPLSPLLQ*QLRGSEDSTMMTDS
Trigger: GCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CCA 90 bp TTGAAGCAAGTACTGCAGATCCCATTAAATGTCCTGGTAACATCCTaGAGGCAGGCTTGGCACTTCCCGGGATCCAAGTGCCTTGTGTGG +
Preference number: 1 (lower is better)
Translates to: LKQVLQIPLNVLVTS*RQAWHFPGSKCLVW
Trigger: CCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGATGTTACCAGGACATTTAATGGGATCTGCAGTACTTGCTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR TCA 90 bp TTGCAGGAGGTGACCCACCTGTTTCCGGTTAGCCATACATCTGCTTaGACTGAAAGCATTCGTTGCAGTAGCCGTTGCACTTGGCATTGC +
Preference number: 1 (lower is better)
Translates to: LQEVTHLFPVSHTSA*TESIRCSSRCTWHC
Trigger: GCAATGCCAAGTGCAACGGCTACTGCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCTAACCGGAAACAGGTGGGTCACCTCCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR GCA 90 bp AACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTaGTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTG +
Preference number: 1 (lower is better)
Translates to: NLGLNLTSSLASYKL*FLRPPGNTPGLPNL
Trigger: CAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CCA 90 bp CCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTaGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGCTT +
Preference number: 1 (lower is better)
Translates to: PKKFLASCLVGEEEP*AESDIIPCQLQALL
Trigger: AAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR TCA 90 bp AACTACAAACACTCTCTGAATACGTCCATTTTCCCTGAGCTTCCTTaGGCTTCTTGCAGAGGGCCTCGCTGCCATGAGGATCTGGCTTCA +
Preference number: 1 (lower is better)
Translates to: NYKHSLNTSIFPELP*ASCRGPRCHEDLAS
Trigger: TGAAGCCAGATCCTCATGGCAGCGAGGCCCTCTGCAAGAAGCTCAAGGAAGCTCAGGGAAAATGGACGTATTCAGAGAGTGTTTGTAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR GCA 90 bp CCAGCAACAGAAAGAGATTTCCTCATACTCATGGTTACTGGCTTTTaGTGTCCCAATACCAGGGTACCATGGGATGCAGGGGACTTCCCA +
Preference number: 1 (lower is better)
Translates to: PATERDFLILMVTGF*CPNTRVPWDAGDFP
Trigger: TGGGAAGTCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTCTGTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
3UTR CCA 90 bp GGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTaGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTTCT +
Preference number: 1 (lower is better)
Translates to: GEASKSVSKRPIYSL*SGTCPQPDSKQGCS
Trigger: AGAACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR TCA 90 bp AAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTaGCTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATTT +
Preference number: 1 (lower is better)
Translates to: KEANLLPVVRNLPTA*LKARMFSQENTVAF
Trigger: AAATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR GCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTaGCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACA +
Preference number: 1 (lower is better)
Translates to: KSVSKRPIYSLWSGT*PQPDSKQGCSLRRT
Trigger: TGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CCA 90 bp AGAGAAACTGTAAGCCAGCAACAGAAAGAGATTTCCTCATACTCATaGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATG +
Preference number: 1 (lower is better)
Translates to: RETVSQQQKEISSYS*LLAFAVPIPGYHGM
Trigger: CATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTCTGTTGCTGGCTTACAGTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
3UTR TCA 90 bp CTTCTGTCCTTTTGGCCTCATGAAATCTCTGATTCTGAGCTTCAATaGAACACTTCTGGCAGTATCCTTCAAACATGGTGCTTCCAAGGG +
Preference number: 1 (lower is better)
Translates to: LLSFWPHEISDSELQ*NTSGSILQTWCFQG
Trigger: CCCTTGGAAGCACCATGTTTGAAGGATACTGCCAGAAGTGTTTCATTGAAGCTCAGAATCAGAGATTTCATGAGGCCAAAAGGACAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR GCA 90 bp AAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATaGAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAG +
Preference number: 1 (lower is better)
Translates to: KEKHETSMNMYVYLG*NSFFPGEASKSVSK
Trigger: CTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CCA 90 bp ATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTaGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCT +
Preference number: 1 (lower is better)
Translates to: IDEYVCIPWMQFLLS*GGKQKCIKEANLLP
Trigger: AGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR TCA 90 bp TTATTACATAGCTGGAGTTTCATAAGGAGAAGCACGAAACATCGATaGATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: LLHSWSFIRRSTKHR*ICMYTLDAIPSFLG
Trigger: CCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAGCTATGTAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CAA 90 bp GGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGGGCCTaGAGGTGCTTTGTGTGGTTCGAGGCACATCTCTGCGCTGGCTCG +
Preference number: 2 (lower is better)
Translates to: GRPGCSCRRPGRTWA*RCFVWFEAHLCAGS
Trigger: CGAGCCAGCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CAA 90 bp TCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTaGGGCCTTGAGGTGCTTTGTGTGGTTCGAGGCACATCTCTGCGC +
Preference number: 2 (lower is better)
Translates to: SLRQARMFLQEARAH*GLEVLCVVRGTSLR
Trigger: GCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp CCAAGGGTGCCGCATTCCCTCCCCAGGCACGGAATGGTGTTCTGGAACCTGGACGGAGTCCGTGCAGCTTaGGACAGGCAGCCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: PRVPHSLPRHGMVFWNLDGVRAA*DRQPAG
Trigger: CCCTGCTGGCTGCCTGTCTCAAGCTGCACGGACTCC...GTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGAGGGAATGCGGCACCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR GCA 90 bp TGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCCTGTGGTCAGGAACTTaGCCACAGCCTGACTCAAAG +
Preference number: 2 (lower is better)
Translates to: CRAPRCGRPGCSCRRPGRLWSGT*PQPDSK
Trigger: CTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAG...GCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp AGGGTGCCGCATTCCCTCCCCAGGCACGGAATGGTGTTCTGGAACCTGGACGCTAGGCCCGGGCGCACTTaGGCCTTGAGGTGCTTTGTG +
Preference number: 2 (lower is better)
Translates to: RVPHSLPRHGMVFWNLDARPGRT*ALRCFV
Trigger: CACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCT...AGCGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGAGGGAATGCGGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR CAA 90 bp GGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGTGAAGTaGCCGGGCGTTGTGGCAACGTTCACAAAATCCGTTGTGCTGCAC +
Preference number: 2 (lower is better)
Translates to: GIQVPCVVWGVAGVK*PGVVATFTKSVVLH
Trigger: GTGCAGCACAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR GCA 90 bp AGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCAACGATGCTGACACTCCATaGAGAGCTCCTCGCTGCGGC +
Preference number: 2 (lower is better)
Translates to: SSRCTWHCQNDHRRGPGNDADTP*RAPRCG
Trigger: GCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC...GTTGCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTAGCCCACTGTTGCAGTaGCAGCTGAGGGGTTCAGAG +
Preference number: 2 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPSPLLQ*QLRGSE
Trigger: CTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCT...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTGGCCCATCCTCTGGTTaGGATGCTGACACTCCATGC +
Preference number: 2 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPGPSSG*DADTPC
Trigger: GCATGGAGTGTCAGCATCCCAACCAGAGGATGGGCC...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp CTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGTGAAGTTGGTCCATGGATGGTTCTaGATTTCTGCCGGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: LPGIQVPCVVWGVAGVKLVHGWF*ISAGSS
Trigger: TGAGGACCCGGCAGAAATGCAGAACCATCCATGGAC...CAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CCA 90 bp AGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCAACAGCCCACTGTTGCAGTaGCAGCTGAGGGGTTCAGAG +
Preference number: 2 (lower is better)
Translates to: SSRCTWHCQNDHRRGPGNSPLLQ*QLRGSE
Trigger: CTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCT...GTTGCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp GGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTGCAGTAGCCGTTGCACTTaGCATTGCCAAAATGATCAC +
Preference number: 2 (lower is better)
Translates to: GRPGCSCRRPGRTWALRCSSRCT*HCQNDH
Trigger: GTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT...GCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp TGCAGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCGCGAGGGATCTGACTTaGAACGCTGGTGACAGGAAG +
Preference number: 2 (lower is better)
Translates to: CSSRCTWHCQNDHRRGPGARDLT*NAGDRK
Trigger: CTTCCTGTCACCAGCGTTCCAAGTCAGATCCCTCGC...GCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR TCA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACCCGGGTTACCAAACCTaGGCATCGTGGGCACCACGA +
Preference number: 2 (lower is better)
Translates to: KFLASCLVGEEEPWAESDPGYQT*ASWAPR
Trigger: TCGTGGTGCCCACGATGCTCAGGTTTGGTAACCCGG...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp GGAATGGTGTTCTGGAACCTGGACGCTGTGGGACTGACTTTCCCTGAGGCAGCAAGGGCCTCGCTGCCATaGGGATCTGGCTTCACATCT +
Preference number: 2 (lower is better)
Translates to: GMVFWNLDAVGLTFPEAARASLP*GSGFTS
Trigger: AGATGTGAAGCCAGATCCTCATGGCAGCGAGGCCCT...TGCTGCCTCAGGGAAAGTCAGTCCCACAGCGTCCAGGTTCCAGAACACCATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR TCA 90 bp CTGGAGGCAGGCTTGGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCTACGTCCATTTTCCCTaGGCTTCCTTGAGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: LEAGLALPGIQVPCVVWGYVHFP*ASLSFL
Trigger: CAAGAAGCTCAAGGAAGCTCAGGGAAAATGGACGTA...GCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR GCA 90 bp GGGGAGGTGGAATGGCTCTGGCTTCTCCAACCCACGCGACTTGTGTGTCTTTTCTGCAGAGGGCCTCGCTaGCATGAGGATCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: GEVEWLWLLQPTRLVCLFCRGPR*HEDLAS
Trigger: TGAAGCCAGATCCTCATGGCAGCGAGGCCCTCTGCA...GAAAAGACACACAAGTCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCGGAGAGGAGGAACCTTaGGCTGAATCTGACATCATC +
Preference number: 2 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFGEEEP*AESDII
Trigger: GATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp CTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATGCACGGAAGGTTCCATaGGATTCTGGGCGTGCCCCT +
Preference number: 2 (lower is better)
Translates to: LHFCRVLRKGTGQVGKNHARKVP*DSGRAP
Trigger: AGGGGCACGCCCAGAATCCCATGGAACCTTCCGTGC...ATGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR CAA 90 bp ACTGCAGATCCCATTAAATGTCCTGGTAACATCCTGGAGGCAGGCTaGGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTG +
Preference number: 2 (lower is better)
Translates to: TADPIKCPGNILEAG*ALPGIQVPCVVWGV
Trigger: CACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGATGTTACCAGGACATTTAATGGGATCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR TCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGCTCTGGTTGGGATGCTaGCACTCCATGCAGAGCTCC +
Preference number: 2 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSLWLGC*HSMQSS
Trigger: GGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAG...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAAGGCCAGGATGTTCTTaGAGGAGGCCCGGGCGCACT +
Preference number: 2 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQRPGCS*RRPGRT
Trigger: AGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCT...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp CCCACGCGACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGCAGAGCTCCTCGCTaGGGCAGGCCAGGATGTTCT +
Preference number: 2 (lower is better)
Translates to: PTRLVCLFPFSAKTMKQSCRAPR*GRPGCS
Trigger: AGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA...GGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGTCGCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp GATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCATCACAGTCCATGGATaGTTCTGCATTTCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: DADTPCRAPRCGRPGCSCITVHG*FCISAG
Trigger: CCCGGCAGAAATGCAGAACCATCCATGGACTGTGAT...GCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp TCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATGTTGCAGTGGCAGCTaGGGGGTTCAGAGGATAGCA +
Preference number: 2 (lower is better)
Translates to: SAFLPGPQERNRAGREKPCCSGS*GVQRIA
Trigger: TGCTATCCTCTGAACCCCTCAGCTGCCACTGCAACA...TGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp CTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAAGTTGGCATTGCCAAAATaGTCACAGGCGGGGGCCCGG +
Preference number: 2 (lower is better)
Translates to: LRITVHGWFCISAGSSGKLALPK*SQAGAR
Trigger: CCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAA...CTTTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp GATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCTTATCTTTCCTCTCCTaGTCAGACACCCTTAAGCCC +
Preference number: 2 (lower is better)
Translates to: DADTPCRAPRCGRPGCSCLSFLS*SDTLKP
Trigger: GGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATAA...GCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGTGCAGAGGGCCTCGCTaGCATGAGGATCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLCRGPR*HEDLAS
Trigger: TGAAGCCAGATCCTCATGGCAGCGAGGCCCTCTGCA...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp AGGGTGCCGCATTCCCTCCCCAGGCACGGAATGGTGTTCTGGAACCTGGACGCTCAATTCCTTCTTTCCTaGGGAGGCAAGCAAAAGTGT +
Preference number: 2 (lower is better)
Translates to: RVPHSLPRHGMVFWNLDAQFLLS*GGKQKC
Trigger: ACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTG...AGCGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGAGGGAATGCGGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGCCATGGTCCCAGCCTTaGACGGGGATTTCTATCACC +
Preference number: 2 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSPWSQP*TGISIT
Trigger: GGTGATAGAAATCCCCGTCCAAGGCTGGGACCATGG...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR CAA 90 bp TCAGAGGATAGCACCATGATGACTGACAGCTCGAGGCCCCACTTCTaGCAGGAGGTGACCCACCTGTTTCCGGTTAGCCATACATCTGCT +
Preference number: 2 (lower is better)
Translates to: SEDSTMMTDSSRPHF*QEVTHLFPVSHTSA
Trigger: AGCAGATGTATGGCTAACCGGAAACAGGTGGGTCACCTCCTGCAAGAAGTGGGGCCTCGAGCTGTCAGTCATCATGGTGCTATCCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCCCGGGTTACCAAACCTaGGCATCGTGGGCACCACGA +
Preference number: 2 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRPGYQT*ASWAPR
Trigger: TCGTGGTGCCCACGATGCTCAGGTTTGGTAACCCGG...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp GCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAATCTCAGCCAAGACGATaGAGCAGTCCTGATGCGCAG +
Preference number: 2 (lower is better)
Translates to: ASESQSMDGSAFLPGPQESQPRR*SSPDAQ
Trigger: CTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGA...TTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCGATTCTGAGCTTCAATaGAACACTTCTGGCAGTATC +
Preference number: 2 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFDSELQ*NTSGSI
Trigger: GATACTGCCAGAAGTGTTTCATTGAAGCTCAGAATC...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAAGCTGCACATTCAGTGTaGAGGGGCAGCCGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQAAHSV*RGSRGS
Trigger: GGAGCCCCGGCTGCCCCTTCACACTGAATGTGCAGC...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR GCA 90 bp CTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATGTCCATGGATGGTTCTaGATTTCTGCCGGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: LHFCRVLRKGTGQVGKNHVHGWF*ISAGSS
Trigger: TGAGGACCCGGCAGAAATGCAGAACCATCCATGGAC...ATGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp GGGGAGGTGGAATGGCTCTGGCTTCTCCAACCCACGCGACTTGTGTGTCTTTTCTGGCTCGATCTCAGTTaGTCTTCTGTCCTTTTGGCC +
Preference number: 2 (lower is better)
Translates to: GEVEWLWLLQPTRLVCLFWLDLS*SSVLLA
Trigger: GGCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCA...GAAAAGACACACAAGTCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGCTCTGTGGCAAGAATaGGGGGAGGGGCTCCGGACG +
Preference number: 2 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCALWQE*GEGLRT
Trigger: CGTCCGGAGCCCCTCCCCGCATTCTTGCCACAGAGC...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CCA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGGGAGGGGAGGTGGAATaGCTCTGGCTTCTCCAACCC +
Preference number: 2 (lower is better)
Translates to: EEEPWAESDIIPCQLQALGGEVE*LWLLQP
Trigger: GGGTTGGAGAAGCCAGAGCCATTCCACCTCCCCTCC...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp GGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTGCTATGTATGTATACCTTaGATGCAATTCCTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: GRPGCSCRRPGRTWALRCYVCIP*MQFLLS
Trigger: GGAAAGAAGGAATTGCATCCAAGGTATACATACATA...GCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAAACGATGAAGCAGTCCTaGTGCGCAGGGTGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQTMKQS*CAGCRG
Trigger: GCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGT...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACCACATTTTACATCCATaGGAGAAAGCTGGGGCACGG +
Preference number: 2 (lower is better)
Translates to: KFLASCLVGEEEPWAESDHILHP*EKAGAR
Trigger: CCGTGCCCCAGCTTTCTCTCATGGATGTAAAATGTG...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR TCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCGGGTGTTCACAGACATaGAGAAGGGGCAGTTGGGCG +
Preference number: 2 (lower is better)
Translates to: KCIKEANLLPVVRNLPTAGCSQT*RRGSWA
Trigger: CGCCCAACTGCCCCTTCTTCATGTCTGTGAACACCC...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR GCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTCAGGGTACCATGGGATaGAGGGGACTTCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCQGTMG*RGLPSP
Trigger: GGGGCTGGGAAGTCCCCTGCATCCCATGGTACCCTG...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
3UTR-3UTR GCA 90 bp GCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAATTCGAGGCACATCTCTaGGCTGGCTCGATCTCAGTT +
Preference number: 2 (lower is better)
Translates to: ASESQSMDGSAFLPGPQEFEAHL*AGSISV
Trigger: AACTGAGATCGAGCCAGCGCAGAGATGTGCCTCGAA...TTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp CTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAAGCTTTCTAAGGCCACCTaGGAACACTCCCGGGTTACC +
Preference number: 2 (lower is better)
Translates to: LRITVHGWFCISAGSSGKLSKAT*EHSRVT
Trigger: GGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG...CTTTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp TCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCAGGAGAGGAGGAACCTTaGGCTGAATCTGACATCATC +
Preference number: 2 (lower is better)
Translates to: SAFLPGPQERNRAGREKPGEEEP*AESDII
Trigger: GATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC...TGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTGAGGTGGAATGGCTCTaGCTTCTCCAACCCACGCGA +
Preference number: 2 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLEVEWL*LLQPTR
Trigger: TCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTC...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCAGGCCCGGGCGCACTTaGGCCTTGAGGTGCTTTGTG +
Preference number: 2 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSRPGRT*ALRCFV
Trigger: CACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCT...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCGGCCCATCCTCTGGTTaGGATGCTGACACTCCATGC +
Preference number: 2 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRGPSSG*DADTPC
Trigger: GCATGGAGTGTCAGCATCCCAACCAGAGGATGGGCC...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CAA 90 bp AGAGCTTATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTaGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACT +
Preference number: 2 (lower is better)
Translates to: RAYLSSPAQTPLSPL*QWQLRGSEDSTMMT
Trigger: AGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATAAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGTTGCAGTGGCAGCTaGGGGGTTCAGAGGATAGCA +
Preference number: 2 (lower is better)
Translates to: KCIKEANLLPVVRNLPTACCSGS*GVQRIA
Trigger: TGCTATCCTCTGAACCCCTCAGCTGCCACTGCAACA...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGGAGCCGCGAGGGATCTaGCTTGGAACGCTGGTGACA +
Preference number: 2 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQEPRGI*LGTLVT
Trigger: TGTCACCAGCGTTCCAAGTCAGATCCCTCGCGGCTC...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR GCA 90 bp GGAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTAAGTTCCTGGCCTCCTaGTTGGTAGGAGAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: GEEEPWAESDIIPCQLQAKFLAS*LVGEEE
Trigger: TTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT...AGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGATGCTGACACTCCATaGAGAGCTCCTCGCTGCGGC +
Preference number: 2 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCDADTP*RAPRCG
Trigger: GCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp ACCTGTTTCCGGTTAGCCATACATCTGCTTGAACTGAAAGCATTCGTTGCAGTAGGCAGCCGGGGCTCCTaGACTTCATGGCAGTGGTCT +
Preference number: 2 (lower is better)
Translates to: TCFRLAIHLLELKAFVAVGSRGS*TSWQWS
Trigger: AGACCACTGCCATGAAGTGCAGGAGCCCCGGCTGCC...TACTGCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCTAACCGGAAACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR GCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGCTGGAGGAGGCCTCTaGTGTAGTCCTTTTGAAGCA +
Preference number: 2 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQAGGGL*CSPFEA
Trigger: TGCTTCAAAAGGACTACAGCAGAGGCCTCCTCCAGC...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CCA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAAGCCCACTGTTGCAGTaGCAGCTGAGGGGTTCAGAG +
Preference number: 2 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPSPLLQ*QLRGSE
Trigger: CTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCT...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGAGGGGAGGTGGAATaGCTCTGGCTTCTCCAACCC +
Preference number: 2 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCGGEVE*LWLLQP
Trigger: GGGTTGGAGAAGCCAGAGCCATTCCACCTCCCCTCC...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp TATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTGGCACATCTCTGCGCTaGCTCGATCTCAGTTGCTCT +
Preference number: 2 (lower is better)
Translates to: YQRGQFTPCGQELAHSLTGTSLR*LDLSCS
Trigger: AGAGCAACTGAGATCGAGCCAGCGCAGAGATGTGCC...AGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp GGAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTCCATGAGAGAAAGCTaGGGCACGGAAGGTTCCATG +
Preference number: 2 (lower is better)
Translates to: GEEEPWAESDIIPCQLQASMRES*GTEGSM
Trigger: CATGGAACCTTCCGTGCCCCAGCTTTCTCTCATGGA...AGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR CAA 90 bp GAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTaGCTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCT +
Preference number: 2 (lower is better)
Translates to: EPWAESDIIPCQLQA*LSKATWEHSRVTKP
Trigger: AGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CAA 90 bp GCCAGCAACAGAAAGAGATTTCCTCATACTCATGGTTACTGGCTTTaGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGACTTCCC +
Preference number: 2 (lower is better)
Translates to: ASNRKRFPHTHGYWL*LSQYQGTMGCRGLP
Trigger: GGGAAGTCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTCTGTTGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
3UTR-3UTR TCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGACGATGAAGCAGTCCTaGTGCGCAGGGTGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKTMKQS*CAGCRG
Trigger: GCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGT...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGAGGGCCTCGCTGCCATaGGGATCTGGCTTCACATCT +
Preference number: 2 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQRASLP*GSGFTS
Trigger: AGATGTGAAGCCAGATCCTCATGGCAGCGAGGCCCT...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTCTCTGGTTGGGATGCTaGCACTCCATGCAGAGCTCC +
Preference number: 2 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCLWLGC*HSMQSS
Trigger: GGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAG...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATTGGCTCGATCTCAGTTaGTCTTCTGTCCTTTTGGCC +
Preference number: 2 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHWLDLS*SSVLLA
Trigger: GGCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCA...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGGCCAGGATGTTCTTaGAGGAGGCCCGGGCGCACT +
Preference number: 2 (lower is better)
Translates to: SMNMYVYLGCNSFFPGEARPGCS*RRPGRT
Trigger: AGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCT...TGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TGCAAGCAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATGCAGAGCTCCTCGCTaGGGCAGGCCAGGATGTTCT +
Preference number: 2 (lower is better)
Translates to: CKQCIHKLMPQQQPENRLCRAPR*GRPGCS
Trigger: AGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA...TAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp ACCTGTTTCCGGTTAGCCATACATCTGCTTGAACTGAAAGCATTCGTTGCAGTATTCCCGGGATCCAAGTaGCTTGTGTGGTCTGGGGCG +
Preference number: 2 (lower is better)
Translates to: TCFRLAIHLLELKAFVAVFPGSK*LVWSGA
Trigger: CGCCCCAGACCACACAAGGCACTTGGATCCCGGGAA...TACTGCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCTAACCGGAAACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CCA 90 bp CAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGAGGTGGAATGGCTCTaGCTTCTCCAACCCACGCGA +
Preference number: 2 (lower is better)
Translates to: QKCIKEANLLPVVRNLPTEVEWL*LLQPTR
Trigger: TCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTC...TGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAGGCACATCTCTGCGCTaGCTCGATCTCAGTTGCTCT +
Preference number: 2 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPGTSLR*LDLSCS
Trigger: AGAGCAACTGAGATCGAGCCAGCGCAGAGATGTGCC...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp TATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAACCGGGTTACCAAACCTaGGCATCGTGGGCACCACGA +
Preference number: 2 (lower is better)
Translates to: YTLDAIPSFLGRQAKVYQPGYQT*ASWAPR
Trigger: TCGTGGTGCCCACGATGCTCAGGTTTGGTAACCCGG...TTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATGGCGCACTTGGGCCTTaGGGTGCTTTGTGTGGTTCG +
Preference number: 2 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHGALGP*GALCGS
Trigger: CGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCC...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp GCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAAGCCATACATCTGCTTaGACTGAAAGCATTCGTTGC +
Preference number: 2 (lower is better)
Translates to: ASESQSMDGSAFLPGPQESHTSA*TESIRC
Trigger: GCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCT...TTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCGCGGCATTGATGAGATaGGTTGTGCCATGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSAALMR*VVPWSQ
Trigger: CTGGGACCATGGCACAACTCATCTCATCAATGCCGC...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR TCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGTGGCAGTGGTCTCACTaGACAGAAAAGGGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQWQWSH*TEKGWV
Trigger: CACCCAGCCCTTTTCTGTTCAGTGAGACCACTGCCA...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR GCA 90 bp TGCTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGTCTGACATCATCCCTTaGCAGTTACAAGCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: CFLRPPGNTPGLPNLSIVSDIIP*QLQALL
Trigger: AAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGA...CACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGAGCTTCATCCAACTTTaGGGCATTGATGAGATGAGT +
Preference number: 2 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSSFIQL*GIDEMS
Trigger: ACTCATCTCATCAATGCCGCAAAGTTGGATGAAGCT...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR GCA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTATGGGATTCTGGGCGTaGCCCTCTCTCCTCCCCTGC +
Preference number: 2 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPMGFWA*PSLLPC
Trigger: GCAGGGGAGGAGAGAGGGGCACGCCCAGAATCCCAT...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCGGAGAGGAGGAACCTTaGGCTGAATCTGACATCATC +
Preference number: 2 (lower is better)
Translates to: KCIKEANLLPVVRNLPTAGEEEP*AESDII
Trigger: GATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATGGAGGGGAGGTGGAATaGCTCTGGCTTCTCCAACCC +
Preference number: 2 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHGGEVE*LWLLQP
Trigger: GGGTTGGAGAAGCCAGAGCCATTCCACCTCCCCTCC...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp TCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCACATACTCATGGTTACTaGCTTTTGCTGTCCCAATAC +
Preference number: 2 (lower is better)
Translates to: SAFLPGPQERNRAGREKPHTHGY*LLLSQY
Trigger: GTATTGGGACAGCAAAAGCCAGTAACCATGAGTATG...TGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
3UTR-3UTR TCA 90 bp AGCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAGATTCTGAGCTTCAATaGAACACTTCTGGCAGTATC +
Preference number: 2 (lower is better)
Translates to: SLRITVHGWFCISAGSSGDSELQ*NTSGSI
Trigger: GATACTGCCAGAAGTGTTTCATTGAAGCTCAGAATC...TCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp GGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGAAGTTCCTGGCCTCCTaGTTGGTAGGAGAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: GKQKCIKEANLLPVVRNLKFLAS*LVGEEE
Trigger: TTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT...CAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATTGCAGAGGGCCTCGCTaGCATGAGGATCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHCRGPR*HEDLAS
Trigger: TGAAGCCAGATCCTCATGGCAGCGAGGCCCTCTGCA...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAACTGTGGTCAGGAACTTaGCCACAGCCTGACTCAAAG +
Preference number: 2 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQLWSGT*PQPDSK
Trigger: CTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAG...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCTTTCCCTGTGACCATTaGCAGTCTCATCCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSFPCDH*QSHPCS
Trigger: GGAGCAGGGATGAGACTGGCAATGGTCACAGGGAAA...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp GGAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTACTACAAACACTCTCTaGATACGTCCATTTTCCCTG +
Preference number: 2 (lower is better)
Translates to: GEEEPWAESDIIPCQLQATTNTL*IRPFSL
Trigger: CAGGGAAAATGGACGTATTCAGAGAGTGTTTGTAGT...AGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATACTACAAACACTCTCTaGATACGTCCATTTTCCCTG +
Preference number: 2 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHTTNTL*IRPFSL
Trigger: CAGGGAAAATGGACGTATTCAGAGAGTGTTTGTAGT...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGCTTTCTAAGGCCTTATCTTTCCTCTCCTaGTCAGACACCCTTAAGCCC +
Preference number: 2 (lower is better)
Translates to: WAESDIIPCQLQALLSKALSFLS*SDTLKP
Trigger: GGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATAA...GGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGTATGTATACCTTGGATaGAATTCCTTCTTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLYVYLG*NSFFPG
Trigger: CCCAGGAAAGAAGGAATTGCATCCAAGGTATACATA...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTAGCCCACTGTTGCAGTaGCAGCTGAGGGGTTCAGAG +
Preference number: 2 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPSPLLQ*QLRGSE
Trigger: CTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCT...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGATCACAGTCCATGGATaGTTCTGCATTTCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQITVHG*FCISAG
Trigger: CCCGGCAGAAATGCAGAACCATCCATGGACTGTGAT...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGAGTAGCCGTTGCACTTaGCATTGCCAAAATGATCAC +
Preference number: 2 (lower is better)
Translates to: EEEPWAESDIIPCQLQALSSRCT*HCQNDH
Trigger: GTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTTCTCAGCCAAGACGATaGAGCAGTCCTGATGCGCAG +
Preference number: 2 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPSQPRR*SSPDAQ
Trigger: CTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGA...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp CAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATTATTAAGGGCCTCGCTGCCATaGGGATCTGGCTTCACATCT +
Preference number: 2 (lower is better)
Translates to: QCIHKLMPQQQPENRLLLRASLP*GSGFTS
Trigger: AGATGTGAAGCCAGATCCTCATGGCAGCGAGGCCCT...TAATAATAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCTACGTCCATTTTCCCTaGGCTTCCTTGAGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSYVHFP*ASLSFL
Trigger: CAAGAAGCTCAAGGAAGCTCAGGGAAAATGGACGTA...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATGTTTTTCTGTCAATGTaGACATGTTCAGTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHVFLSM*TCSVSA
Trigger: TGCTGAGACTGAACATGTTCACATTGACAGAAAAAC...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTTTGGGAGTTTGTTTTaGTTCTTTTGCCGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: KCIKEANLLPVVRNLPTAFGSLF*FFCRLS
Trigger: AGAGAGGCGGCAAAAGAATCAAAACAAACTCCCAAA...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR GCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTATCTTTCCTCTCCTaGTCAGACACCCTTAAGCCC +
Preference number: 2 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQLSFLS*SDTLKP
Trigger: GGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATAA...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTCTGACATCATCCCTTaGCAGTTACAAGCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLSDIIP*QLQALL
Trigger: AAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGA...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCTCTGACATCATCCCTTaGCAGTTACAAGCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRSDIIP*QLQALL
Trigger: AAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGA...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTGTATACACAAGCTCATaGCCCAACAACAACCAGAAA +
Preference number: 2 (lower is better)
Translates to: YQRGQFTPCGQELAHSLTVYTSS*PNNNQK
Trigger: TTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATAC...AGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGTTCGAGGCACATCTCTaGGCTGGCTCGATCTCAGTT +
Preference number: 2 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKFEAHL*AGSISV
Trigger: AACTGAGATCGAGCCAGCGCAGAGATGTGCCTCGAA...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp GGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCGTTGCAGTAGCCGTTaGACTTGGCATTGCCAAAAT +
Preference number: 2 (lower is better)
Translates to: GKQKCIKEANLLPVVRNLRCSSR*TWHCQN
Trigger: ATTTTGGCAATGCCAAGTGCAACGGCTACTGCAACG...CAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTGTTTTTCTGTCAATGTaGACATGTTCAGTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCVFLSM*TCSVSA
Trigger: TGCTGAGACTGAACATGTTCACATTGACAGAAAAAC...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATATGGTTCTGCATTTCTaGCGGGTCCTCAGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHMVLHF*RVLRKG
Trigger: TCCTTTCCTGAGGACCCGGCAGAAATGCAGAACCAT...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp TCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCACCAATTTACTCCCTGTaGTCAGGAACTTGCCCACAG +
Preference number: 2 (lower is better)
Translates to: SMNMYVYLGCNSFFPGEAPIYSL*SGTCPQ
Trigger: CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGG...TGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCAATTCCTTCTTTCCTaGGGAGGCAAGCAAAAGTGT +
Preference number: 2 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQQFLLS*GGKQKC
Trigger: ACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTG...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGGTCTCTGTTAACAAGTaGAACAGCTCGGATTTCAGG +
Preference number: 2 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQVSVNK*NSSDFR
Trigger: CCTGAAATCCGAGCTGTTCCACTTGTTAACAGAGAC...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR TCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTTCTCAGCCAAGACGATaGAGCAGTCCTGATGCGCAG +
Preference number: 2 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLSQPRR*SSPDAQ
Trigger: CTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGA...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGCCAGTTACAAGCTTTaGTTTCTAAGGCCACCTGGG +
Preference number: 2 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKASYKL*FLRPPG
Trigger: CCCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGC...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAACGTTGCAGTAGCCGTTaGACTTGGCATTGCCAAAAT +
Preference number: 2 (lower is better)
Translates to: YTLDAIPSFLGRQAKVYQRCSSR*TWHCQN
Trigger: ATTTTGGCAATGCCAAGTGCAACGGCTACTGCAACG...TTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGACTGAAAGCATTCGTTaGAGTAGCCGTTGCACTTGG +
Preference number: 2 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKTESIR*SSRCTW
Trigger: CCAAGTGCAACGGCTACTGCAACGAATGCTTTCAGT...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTCACGGAATGGTGTTCTaGAACCTGGACGCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: EARNIDEYVCIPWMQFLLHGMVF*NLDAVG
Trigger: TCCCACAGCGTCCAGGTTCCAGAACACCATTCCGTG...AAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR GCA 90 bp GCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTTCTGACATCATCCCTTaGCAGTTACAAGCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: AIPSFLGRQAKVYQRGQFSDIIP*QLQALL
Trigger: AAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGA...AAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATCATAGCCGAGAACAATaGGGTATCTGTAGCATTCCT +
Preference number: 2 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHHSREQ*GICSIP
Trigger: AGGAATGCTACAGATACCCCATTGTTCTCGGCTATG...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR TCA 90 bp GTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAGTTTTTCTGTCAATGTaGACATGTTCAGTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: VYLGCNSFFPGEASKSVSVFLSM*TCSVSA
Trigger: TGCTGAGACTGAACATGTTCACATTGACAGAAAAAC...TGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp TGCAAGCAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTAAGCTGGTTGAGTTTATaGAAGCAGTGTATACACAAG +
Preference number: 2 (lower is better)
Translates to: CKQCIHKLMPQQQPENRLSWLSL*KQCIHK
Trigger: CTTGTGTATACACTGCTTGCATAAACTCAACCAGCT...TAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTGCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp ACCTGTTTCCGGTTAGCCATACATCTGCTTGAACTGAAAGCATTCGTTGCAGTATATGTATACCTTGGATaGAATTCCTTCTTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: TCFRLAIHLLELKAFVAVYVYLG*NSFFPG
Trigger: CCCAGGAAAGAAGGAATTGCATCCAAGGTATACATA...TACTGCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCTAACCGGAAACAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATCATACTCATGGTTACTaGCTTTTGCTGTCCCAATAC +
Preference number: 2 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHHTHGY*LLLSQY
Trigger: GTATTGGGACAGCAAAAGCCAGTAACCATGAGTATG...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
3UTR-3UTR TCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTTACGTCCATTTTCCCTaGGCTTCCTTGAGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLYVHFP*ASLSFL
Trigger: CAAGAAGCTCAAGGAAGCTCAGGGAAAATGGACGTA...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR TCA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTACTACAAACACTCTCTaGATACGTCCATTTTCCCTG +
Preference number: 2 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPTTNTL*IRPFSL
Trigger: CAGGGAAAATGGACGTATTCAGAGAGTGTTTGTAGT...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTTTATCTTTCCTCTCCTaGTCAGACACCCTTAAGCCC +
Preference number: 2 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLLSFLS*SDTLKP
Trigger: GGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATAA...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTGTATACACAAGCTCATaGCCCAACAACAACCAGAAA +
Preference number: 2 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPVYTSS*PNNNQK
Trigger: TTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATAC...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR GCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGAGCTGGTTGAGTTTATaGAAGCAGTGTATACACAAG +
Preference number: 2 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKSWLSL*KQCIHK
Trigger: CTTGTGTATACACTGCTTGCATAAACTCAACCAGCT...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATCTTGGAGTTCAGCTTTaGGAGTTTGTTTTGATTCTT +
Preference number: 2 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHLGVQL*EFVLIL
Trigger: AAGAATCAAAACAAACTCCCAAAGCTGAACTCCAAG...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGTATGTATGTATACCTTaGATGCAATTCCTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKYVCIP*MQFLLS
Trigger: GGAAAGAAGGAATTGCATCCAAGGTATACATACATA...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR TCA 72 bp CGGTGGGCCCCAGGGCCCATCCTCTGGTTGGGATGCTaGCACTCCATGCAGAGCTCCTCGCTGCGGCAGGCC +
Preference number: 3 (lower is better)
Translates to: RWAPGPILWLGC*HSMQSSSLRQA
Trigger: GGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGATGGGCCCTGGGGCCCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR GCA 72 bp TGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTaGAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTGC +
Preference number: 3 (lower is better)
Translates to: CRAPRCGRPGCS*RRPGRTWALRC
Trigger: GCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CCA 72 bp GCTCACCCCGGTGGGCCCCAGGGCCCATCCTCTGGTTaGGATGCTGACACTCCATGCAGAGCTCCTCGCTGC +
Preference number: 3 (lower is better)
Translates to: AHPGGPQGPSSG*DADTPCRAPRC
Trigger: GCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGATGGGCCCTGGGGCCCACCGGGGTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CCA 72 bp GGGAGGGGCTCCGGACGAGCCGCGAGGGATCTGACTTaGAACGCTGGTGACAGGAAGGAGGGAGGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: GRGSGRAARDLT*NAGDRKEGGWC
Trigger: GCACCAGCCTCCCTCCTTCCTGTCACCAGCGTTCCAAGTCAGATCCCTCGCGGCTCGTCCGGAGCCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR TCA 72 bp ATGCGGGGAGGGGCTCCGGACGAGCCGCGAGGGATCTaGCTTGGAACGCTGGTGACAGGAAGGAGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: MRGGAPDEPRGI*LGTLVTGRREA
Trigger: AGCCTCCCTCCTTCCTGTCACCAGCGTTCCAAGTCAGATCCCTCGCGGCTCGTCCGGAGCCCCTCCCCGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CAA 90 bp AGACAGGCAGCCAGCAGGGGCGTCGTTTCCAGCTCTGTGGCAAGAATGCGGGGAGAGGCCCGGGCGCACTaGGGCCTTGAGGTGCTTTGT +
Preference number: 3 (lower is better)
Translates to: RQAASRGVVSSSVARMRGEARAH*GLEVLC
Trigger: ACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTC...TCCCCGCATTCTTGCCACAGAGCTGGAAACGACGCCCCTGCTGGCTGCCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CAA 90 bp AGGGTGCCGCATTCCCTCCCCAGGCACGGAATGGTGTTCTGGAACCTGGACGCTGTGGCTGGCGTGAAGTaGCCGGGCGTTGTGGCAACG +
Preference number: 3 (lower is better)
Translates to: RVPHSLPRHGMVFWNLDAVAGVK*PGVVAT
Trigger: CGTTGCCACAACGCCCGGCAACTTCACGCCAGCCAC...AGCGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGAGGGAATGCGGCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR GCA 72 bp TCTTGCAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTaGTTTGTGTGGTTCGAGGCACATCTCTGCGCTGGC +
Preference number: 3 (lower is better)
Translates to: SCRRPGRTWALR*FVWFEAHLCAG
Trigger: GCCAGCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CCA 72 bp CGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTaGCGTGAAGTTGCCGGGCGTTGTGGCAACGTTCAC +
Preference number: 3 (lower is better)
Translates to: RDPSALCGLGRG*REVAGRCGNVH
Trigger: GTGAACGTTGCCACAACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR CCA 72 bp TTGGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTaGGGCGTGGCTGGCGTGAAGTTGCCGGGCGTTGTG +
Preference number: 3 (lower is better)
Translates to: LALPGIQVPCVV*GVAGVKLPGVV
Trigger: CACAACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CAA 90 bp AGACAGGCAGCCAGCAGGGGCGTCGTTTCCAGCTCTGTGGCAAGAATGCGGGGAGGGCGCACTTGGGCCTaGAGGTGCTTTGTGTGGTTC +
Preference number: 3 (lower is better)
Translates to: RQAASRGVVSSSVARMRGGRTWA*RCFVWF
Trigger: GAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCC...TCCCCGCATTCTTGCCACAGAGCTGGAAACGACGCCCCTGCTGGCTGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR GCA 72 bp CAGGGCCCATCCTCTGGTTGGGATGCTGACACTCCATaGAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCT +
Preference number: 3 (lower is better)
Translates to: QGPSSGWDADTP*RAPRCGRPGCS
Trigger: AGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGATGGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CCA 72 bp AGGCCCGGGCGCACTTGGGCCTTGAGGTGCTTTGTGTaGTTCGAGGCACATCTCTGCGCTGGCTCGATCTCA +
Preference number: 3 (lower is better)
Translates to: RPGRTWALRCFV*FEAHLCAGSIS
Trigger: TGAGATCGAGCCAGCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR TCA 72 bp GATGTTCTTGCAGGAGGCCCGGGCGCACTTGGGCCTTaGGGTGCTTTGTGTGGTTCGAGGCACATCTCTGCG +
Preference number: 3 (lower is better)
Translates to: DVLAGGPGALGP*GALCGSRHISA
Trigger: CGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CCA 72 bp AGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTaGGCCTTGAGGTGCTTTGTGTGGTTCGAGGCACAT +
Preference number: 3 (lower is better)
Translates to: RPGCSCRRPGRT*ALRCFVWFEAH
Trigger: ATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CCA 72 bp GTGCCGCATTCCCTCCCCAGGCACGGAATGGTGTTCTaGAACCTGGACGCTGTGGGACTGACTTTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: VPHSLPRHGMVF*NLDAVGLTFPE
Trigger: CTCAGGGAAAGTCAGTCCCACAGCGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGAGGGAATGCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CAA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACCCCTTAAGCCCACTGTaGCAGTGGCAGCTGAGGGGT +
Preference number: 3 (lower is better)
Translates to: KFLASCLVGEEEPWAESDPLSPL*QWQLRG
Trigger: ACCCCTCAGCTGCCACTGCAACAGTGGGCTTAAGGG...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp TGCTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGCTTCCTTGAGCTTCTaGCAGAGGGCCTCGCTGCCA +
Preference number: 3 (lower is better)
Translates to: CFLRPPGNTPGLPNLSIVASLSF*QRASLP
Trigger: TGGCAGCGAGGCCCTCTGCAAGAAGCTCAAGGAAGC...CACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTCAGGCCAGGATGTTCTaGCAGGAGGCCCGGGCGCAC +
Preference number: 3 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLQARMF*QEARAH
Trigger: GTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTG...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR TCA 72 bp TCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGTaGAGTTGCCGGGCGTTGTGGCAACGTTCACAAAAT +
Preference number: 3 (lower is better)
Translates to: SKCLVWSGAWLA*SCRALWQRSQN
Trigger: ATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CAA 90 bp TGCAGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCTCCAACCCACGCGACTaGTGTGTCTTTTCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: CSSRCTWHCQNDHRRGPGSNPRD*CVFSLS
Trigger: AGAAAGGGAAAAGACACACAAGTCGCGTGGGTTGGA...GCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp CCCACGCGACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCGCTTCCTTGAGCTTCTaGCAGAGGGCCTCGCTGCCA +
Preference number: 3 (lower is better)
Translates to: PTRLVCLFPFSAKTMKQSASLSF*QRASLP
Trigger: TGGCAGCGAGGCCCTCTGCAAGAAGCTCAAGGAAGC...GGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGTCGCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp TCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCAGCCATGGTCCCAGCCTaGGACGGGGATTTCTATCAC +
Preference number: 3 (lower is better)
Translates to: SAFLPGPQERNRAGREKPAMVPA*DGDFYH
Trigger: GTGATAGAAATCCCCGTCCAAGGCTGGGACCATGGC...TGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR TCA 72 bp GACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATaGAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTCG +
Preference number: 3 (lower is better)
Translates to: DLCVFSLSQPRR*SSPDAQGAGAS
Trigger: CGAGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR TCA 72 bp GCTTCCTTGAGCTTCTTGCAGAGGGCCTCGCTGCCATaGGGATCTGGCTTCACATCTCTGAGAGATGCTGGG +
Preference number: 3 (lower is better)
Translates to: ASLSFLQRASLP*GSGFTSLRDAG
Trigger: CCCAGCATCTCTCAGAGATGTGAAGCCAGATCCTCATGGCAGCGAGGCCCTCTGCAAGAAGCTCAAGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR GCA 72 bp CTCAGCAGCCTCAGAATCACAGTCCATGGATGGTTCTaGATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGC +
Preference number: 3 (lower is better)
Translates to: LSSLRITVHGWF*ISAGSSGKEPG
Trigger: GCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGCTGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR GCA 72 bp GAAAGCATTCGTTGCAGTAGCCGTTGCACTTGGCATTaGCAAAATGATCACAGGCGGGGGCCCGGCAACGCT +
Preference number: 3 (lower is better)
Translates to: ESIRCSSRCTWH*QNDHRRGPGNA
Trigger: AGCGTTGCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACTGCAACGAATGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGTCGAGGCCCCACTTCTaGCAGGAGGTGACCCACCTG +
Preference number: 3 (lower is better)
Translates to: EEEPWAESDIIPCQLQALSRPHF*QEVTHL
Trigger: CAGGTGGGTCACCTCCTGCAAGAAGTGGGGCCTCGA...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR GCA 72 bp TCTGGCAGTATCCTTCAAACATGGTGCTTCCAAGGGTaGCGCATTCCCTCCCCAGGCACGGAATGGTGTTCT +
Preference number: 3 (lower is better)
Translates to: SGSILQTWCFQG*RIPSPGTEWCS
Trigger: AGAACACCATTCCGTGCCTGGGGAGGGAATGCGGCACCCTTGGAAGCACCATGTTTGAAGGATACTGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR CCA 72 bp TCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTaGCAGCTGAGGGGTTCAGAGGATAGCACCATGATG +
Preference number: 3 (lower is better)
Translates to: SPAQTPLSPLLQ*QLRGSEDSTMM
Trigger: CATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGTGCCAGTTACAAGCTTaGCTTTCTAAGGCCACCTGG +
Preference number: 3 (lower is better)
Translates to: PAHLPSPKKFLASCLVGECQLQA*LSKATW
Trigger: CCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCA...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTGGGCGCACTTGGGCCTaGAGGTGCTTTGTGTGGTTC +
Preference number: 3 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLGRTWA*RCFVWF
Trigger: GAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCC...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR GCA 72 bp ATCGTGGGCACCACGAAGAGCTTATCTTTCCTCTCCTaGTCAGACACCCTTAAGCCCACTGTTGCAGTGGCA +
Preference number: 3 (lower is better)
Translates to: IVGTTKSLSFLS*SDTLKPTVAVA
Trigger: TGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATAAGCTCTTCGTGGTGCCCACGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR GCA 72 bp GCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTaGTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCT +
Preference number: 3 (lower is better)
Translates to: AHLPSPKKFLAS*LVGEEEPWAES
Trigger: AGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CCA 72 bp CCATTAAATGTCCTGGTAACATCCTGGAGGCAGGCTTaGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCT +
Preference number: 3 (lower is better)
Translates to: PLNVLVTSWRQA*HFPGSKCLVWS
Trigger: AGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGATGTTACCAGGACATTTAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR CCA 72 bp GTACTGCAGATCCCATTAAATGTCCTGGTAACATCCTaGAGGCAGGCTTGGCACTTCCCGGGATCCAAGTGC +
Preference number: 3 (lower is better)
Translates to: VLQIPLNVLVTS*RQAWHFPGSKC
Trigger: GCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGATGTTACCAGGACATTTAATGGGATCTGCAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CAA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACCATGGTTACTGGCTTTaGCTGTCCCAATACCAGGGT +
Preference number: 3 (lower is better)
Translates to: KFLASCLVGEEEPWAESDHGYWL*LSQYQG
Trigger: ACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
3UTR-3UTR CAA 90 bp GATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCTTCAAAGGGGCGAAATaGGAACCTGATTCCAAACTT +
Preference number: 3 (lower is better)
Translates to: DADTPCRAPRCGRPGCSCFKGAK*EPDSKL
Trigger: AAGTTTGGAATCAGGTTCCAATTTCGCCCCTTTGAA...GCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CAA 90 bp ACCTGTTTCCGGTTAGCCATACATCTGCTTGAACTGAAAGCATTCGTTGCAGTACGGGATCCAAGTGCCTaGTGTGGTCTGGGGCGTGGC +
Preference number: 3 (lower is better)
Translates to: TCFRLAIHLLELKAFVAVRDPSA*CGLGRG
Trigger: GCCACGCCCCAGACCACACAAGGCACTTGGATCCCG...TACTGCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCTAACCGGAAACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CAA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCAGGAGTCCGTGCAGCTaGAGACAGGCAGCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSRSPCS*RQAASR
Trigger: CCTGCTGGCTGCCTGTCTCAAGCTGCACGGACTCCT...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CAA 90 bp CAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACACCGGCTTTTCTGCACTaGCTCGTCCCCGTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: QKCIKEANLLPVVRNLPTPAFLH*LVPVLS
Trigger: GGACAGGACGGGGACGAGCAAGTGCAGAAAAGCCGG...TGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR TCA 72 bp CACTCTCTGAATACGTCCATTTTCCCTGAGCTTCCTTaGGCTTCTTGCAGAGGGCCTCGCTGCCATGAGGAT +
Preference number: 3 (lower is better)
Translates to: HSLNTSIFPELP*ASCRGPRCHED
Trigger: ATCCTCATGGCAGCGAGGCCCTCTGCAAGAAGCTCAAGGAAGCTCAGGGAAAATGGACGTATTCAGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CCA 72 bp CCTTGCCAGTTACAAGCTTTGCTTTCTAAGGCCACCTaGGAACACTCCCGGGTTACCAAACCTGAGCATCGT +
Preference number: 3 (lower is better)
Translates to: PCQLQALLSKAT*EHSRVTKPEHR
Trigger: ACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp GCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTTCGAGGCCCCACTTCTaGCAGGAGGTGACCCACCTG +
Preference number: 3 (lower is better)
Translates to: AIPSFLGRQAKVYQRGQFSRPHF*QEVTHL
Trigger: CAGGTGGGTCACCTCCTGCAAGAAGTGGGGCCTCGA...AAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp GCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAATCCAACCCACGCGACTaGTGTGTCTTTTCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: ASESQSMDGSAFLPGPQESNPRD*CVFSLS
Trigger: AGAAAGGGAAAAGACACACAAGTCGCGTGGGTTGGA...TTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGGCTTCCTTGAGCTTCTaGCAGAGGGCCTCGCTGCCA +
Preference number: 3 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQASLSF*QRASLP
Trigger: TGGCAGCGAGGCCCTCTGCAAGAAGCTCAAGGAAGC...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp TCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCATCGAGGCCCCACTTCTaGCAGGAGGTGACCCACCTG +
Preference number: 3 (lower is better)
Translates to: SMNMYVYLGCNSFFPGEASRPHF*QEVTHL
Trigger: CAGGTGGGTCACCTCCTGCAAGAAGTGGGGCCTCGA...TGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAATGCCAGTTACAAGCTTaGCTTTCTAAGGCCACCTGG +
Preference number: 3 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQCQLQA*LSKATW
Trigger: CCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCA...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp CTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAAGTGCCAGTTACAAGCTTaGCTTTCTAAGGCCACCTGG +
Preference number: 3 (lower is better)
Translates to: LRITVHGWFCISAGSSGKCQLQA*LSKATW
Trigger: CCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCA...CTTTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp ATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTCAGGGCCCGGCTaGGAGTTCAGCTTTGGGAGT +
Preference number: 3 (lower is better)
Translates to: IPSFLGRQAKVYQRGQFTPSGPG*EFSFGS
Trigger: ACTCCCAAAGCTGAACTCCAAGCCGGGCCCTGAGGG...AGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR-3UTR CAA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCACTGGCTCGATCTCAGTaGCTCTTCTGTCCTTTTGGC +
Preference number: 3 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPLARSQ*LFCPFG
Trigger: GCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCAG...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp CGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGAGGCCCGGGCGCACTaGGGCCTTGAGGTGCTTTGT +
Preference number: 3 (lower is better)
Translates to: RNIDEYVCIPWMQFLLSWEARAH*GLEVLC
Trigger: ACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTC...CCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR TCA 72 bp GAACTACAAACACTCTCTGAATACGTCCATTTTCCCTaGGCTTCCTTGAGCTTCTTGCAGAGGGCCTCGCTG +
Preference number: 3 (lower is better)
Translates to: ELQTLSEYVHFP*ASLSFLQRASL
Trigger: CAGCGAGGCCCTCTGCAAGAAGCTCAAGGAAGCTCAGGGAAAATGGACGTATTCAGAGAGTGTTTGTAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR TCA 72 bp GTGACCCACCTGTTTCCGGTTAGCCATACATCTGCTTaGACTGAAAGCATTCGTTGCAGTAGCCGTTGCACT +
Preference number: 3 (lower is better)
Translates to: VTHLFPVSHTSA*TESIRCSSRCT
Trigger: AGTGCAACGGCTACTGCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCTAACCGGAAACAGGTGGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR TCA 72 bp AAGTTAGCTTCATCCAACTTTGCGGCATTGATGAGATaGGTTGTGCCATGGTCCCAGCCTTGGACGGGGATT +
Preference number: 3 (lower is better)
Translates to: KLASSNFAALMR*VVPWSQPWTGI
Trigger: AATCCCCGTCCAAGGCTGGGACCATGGCACAACTCATCTCATCAATGCCGCAAAGTTGGATGAAGCTAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR TCA 72 bp ACGGAATGGTGTTCTGGAACCTGGACGCTGTGGGACTaGCTTTCCCTGAGGCAGCAGCAAAATGTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: TEWCSGTWTLWD*LSLRQQQNVCF
Trigger: AAAACAAACATTTTGCTGCTGCCTCAGGGAAAGTCAGTCCCACAGCGTCCAGGTTCCAGAACACCATTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR GCA 72 bp CTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTaGTTTCTAAGGCCACCTGGGAACACTCCCGGGTTA +
Preference number: 3 (lower is better)
Translates to: LNLTSSLASYKL*FLRPPGNTPGL
Trigger: TAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR GCA 72 bp TCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTaGCCACAGCCTGACTCAAAGCAAGGATGTTCTCTC +
Preference number: 3 (lower is better)
Translates to: SKRPIYSLWSGT*PQPDSKQGCSL
Trigger: GAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGGCTCGATCTCAGTaGCTCTTCTGTCCTTTTGGC +
Preference number: 3 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSLARSQ*LFCPFG
Trigger: GCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCAG...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR GCA 72 bp GAAAGAGATTTCCTCATACTCATGGTTACTGGCTTTTaGTGTCCCAATACCAGGGTACCATGGGATGCAGGG +
Preference number: 3 (lower is better)
Translates to: ERDFLILMVTGF*CPNTRVPWDAG
Trigger: CCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
3UTR-3UTR CAA 90 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCGAGGCCCCACTTCTaGCAGGAGGTGACCCACCTG +
Preference number: 3 (lower is better)
Translates to: EARNIDEYVCIPWMQFLLSRPHF*QEVTHL
Trigger: CAGGTGGGTCACCTCCTGCAAGAAGTGGGGCCTCGA...AAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGTGCCAGTTACAAGCTTaGCTTTCTAAGGCCACCTGG +
Preference number: 3 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQCQLQA*LSKATW
Trigger: CCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCA...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTAGTGTGCAAAAGCCCTaGTTTTCTGGAGTCCCAAAA +
Preference number: 3 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCSVQKP*FSGVPK
Trigger: TTTTGGGACTCCAGAAAACAAGGGCTTTTGCACACT...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR TCA 72 bp AGCACTCATGGCATAAAGGCTGGGTGTTCACAGACATaGAGAAGGGGCAGTTGGGCGTTTCACATTTTACAT +
Preference number: 3 (lower is better)
Translates to: STHGIKAGCSQT*RRGSWAFHILH
Trigger: ATGTAAAATGTGAAACGCCCAACTGCCCCTTCTTCATGTCTGTGAACACCCAGCCTTTATGCCATGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR CCA 72 bp AGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTaGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAA +
Preference number: 3 (lower is better)
Translates to: SKSVSKRPIYSL*SGTCPQPDSKQ
Trigger: TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp CAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACACTTTGGGAGTTTGTTTaGATTCTTTTGCCGCCTCTC +
Preference number: 3 (lower is better)
Translates to: QKCIKEANLLPVVRNLPTLWEFV*ILLPPL
Trigger: GAGAGGCGGCAAAAGAATCAAAACAAACTCCCAAAG...TGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR CCA 72 bp GTAAGCCAGCAACAGAAAGAGATTTCCTCATACTCATaGTTACTGGCTTTTGCTGTCCCAATACCAGGGTAC +
Preference number: 3 (lower is better)
Translates to: VSQQQKEISSYS*LLAFAVPIPGY
Trigger: GTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTCTGTTGCTGGCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
3UTR CCA 72 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTaGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAA +
Preference number: 3 (lower is better)
Translates to: EARNIDEYVCIP*MQFLLSWGGKQ
Trigger: TTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR-3UTR CAA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTTCCAACCCACGCGACTaGTGTGTCTTTTCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLSNPRD*CVFSLS
Trigger: AGAAAGGGAAAAGACACACAAGTCGCGTGGGTTGGA...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR TCA 72 bp TTTTGGCCTCATGAAATCTCTGATTCTGAGCTTCAATaGAACACTTCTGGCAGTATCCTTCAAACATGGTGC +
Preference number: 3 (lower is better)
Translates to: FWPHEISDSELQ*NTSGSILQTWC
Trigger: GCACCATGTTTGAAGGATACTGCCAGAAGTGTTTCATTGAAGCTCAGAATCAGAGATTTCATGAGGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
3UTR GCA 72 bp CACGAAACATCGATGAATATGTATGTATACCTTGGATaGAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGT +
Preference number: 3 (lower is better)
Translates to: HETSMNMYVYLG*NSFFPGEASKS
Trigger: ACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CCA 72 bp TATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTaGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAAT +
Preference number: 3 (lower is better)
Translates to: YVCIPWMQFLLS*GGKQKCIKEAN
Trigger: ATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR TCA 72 bp AGCTGGAGTTTCATAAGGAGAAGCACGAAACATCGATaGATATGTATGTATACCTTGGATGCAATTCCTTCT +
Preference number: 3 (lower is better)
Translates to: SWSFIRRSTKHR*ICMYTLDAIPS
Trigger: AGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCAGGCCCCGAGCGCCATaGCAGGGAGCCCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFRPRAP*QGAPQG
Trigger: GCCCTGAGGGGCTCCCTGGCATGGCGCTCGGGGCCT...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCGGAGGGGAGGTGGAATaGCTCTGGCTTCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: CRAPRCGRPGCSCRRPGRGGEVE*LWLLQP
Trigger: GGGTTGGAGAAGCCAGAGCCATTCCACCTCCCCTCC...GCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CAA 72 bp ATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTaGCAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: MQSSSLRQARMF*QEARAHLGLEV
Trigger: CACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTGCTTGGCATTGCCAAAATaGTCACAGGCGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GRPGCSCRRPGRTWALRCLALPK*SQAGAR
Trigger: CCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAA...GCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGGTTCCATGGGATTCTaGGCGTGCCCCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ELLAAAGQDVLAGGPGALGSMGF*ACPSLL
Trigger: GAGGAGAGAGGGGCACGCCCAGAATCCCATGGAACC...AAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
3UTR CAA 72 bp GGAGGCAGGCTTGGCACTTCCCGGGATCCAAGTGCCTaGTGTGGTCTGGGGCGTGGCTGGCGTGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: GGRLGTSRDPSA*CGLGRGWREVA
Trigger: GGCAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR TCA 90 bp TGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACGCCCCACATGTACTaGGAAGTGGCATGCATGAGG +
Preference number: 4 (lower is better)
Translates to: CRAPRCGRPGCSCRRPGRTPHMY*EVACMR
Trigger: CCTCATGCATGCCACTTCTCAGTACATGTGGGGCGT...GCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCTGGCAGTGGTCTCACTaGACAGAAAAGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CRAPRCGRPGCSCRRPGRWQWSH*TEKGWV
Trigger: CACCCAGCCCTTTTCTGTTCAGTGAGACCACTGCCA...GCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGTGAAGTTGGCTGCACATTCAGTGTaGAGGGGCAGCCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LPGIQVPCVVWGVAGVKLAAHSV*RGSRGS
Trigger: GGAGCCCCGGCTGCCCCTTCACACTGAATGTGCAGC...CAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR TCA 90 bp GAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTAGGGCCTCGCTGCCATaGGGATCTGGCTTCACATCT +
Preference number: 4 (lower is better)
Translates to: ELLAAAGQDVLAGGPGALRASLP*GSGFTS
Trigger: AGATGTGAAGCCAGATCCTCATGGCAGCGAGGCCCT...AAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GGGGAGGTGGAATGGCTCTGGCTTCTCCAACCCACGCGACTTGTGTGTCTTTTCAGGCCCCGAGCGCCATaGCAGGGAGCCCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GEVEWLWLLQPTRLVCLFRPRAP*QGAPQG
Trigger: GCCCTGAGGGGCTCCCTGGCATGGCGCTCGGGGCCT...GAAAAGACACACAAGTCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCACGATGAAGCAGTCCTaGTGCGCAGGGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFTMKQS*CAGCRG
Trigger: GCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGT...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AGACAGGCAGCCAGCAGGGGCGTCGTTTCCAGCTCTGTGGCAAGAATGCGGGGAACGATGAAGCAGTCCTaGTGCGCAGGGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RQAASRGVVSSSVARMRGTMKQS*CAGCRG
Trigger: GCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGT...TCCCCGCATTCTTGCCACAGAGCTGGAAACGACGCCCCTGCTGGCTGCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR GCA 90 bp AGGGTGCCGCATTCCCTCCCCAGGCACGGAATGGTGTTCTGGAACCTGGACGCTATGGGATTCTGGGCGTaGCCCTCTCTCCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RVPHSLPRHGMVFWNLDAMGFWA*PSLLPC
Trigger: GCAGGGGAGGAGAGAGGGGCACGCCCAGAATCCCAT...AGCGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGAGGGAATGCGGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CCA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCGGCTCCAAGCTCGCTTaGCCCGCCACGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFGSKLA*PATKTA
Trigger: TGCAGTCTTCGTGGCGGGCCAAGCGAGCTTGGAGCC...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612899.5
CDS-3UTR TCA 90 bp CGGGCGCACTTGGGCCTTGAGGTGCTTTGTGTGGTTCGAGGCACATCTCTGCGCTGGACGCTGTGGGACTaGCTTTCCCTGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAHLGLEVLCVVRGTSLRWTLWD*LSLRQQ
Trigger: CTGCTGCCTCAGGGAAAGTCAGTCCCACAGCGTCCA...GCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCGGCGCACTTGGGCCTTaGGGTGCTTTGTGTGGTTCG +
Preference number: 4 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFGALGP*GALCGS
Trigger: CGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCC...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AGGGTGCCGCATTCCCTCCCCAGGCACGGAATGGTGTTCTGGAACCTGGACGCTCCGGGTTACCAAACCTaGGCATCGTGGGCACCACGA +
Preference number: 4 (lower is better)
Translates to: RVPHSLPRHGMVFWNLDAPGYQT*ASWAPR
Trigger: TCGTGGTGCCCACGATGCTCAGGTTTGGTAACCCGG...AGCGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGAGGGAATGCGGCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR TCA 90 bp TCCTCTGGTTGGGATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCACCGGGTTACCAAACCTaGGCATCGTGGGCACCACGA +
Preference number: 4 (lower is better)
Translates to: SSGWDADTPCRAPRCGRPPGYQT*ASWAPR
Trigger: TCGTGGTGCCCACGATGCTCAGGTTTGGTAACCCGG...TGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCGGCAGCCGGGGCTCCTaGACTTCATGGCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: DADTPCRAPRCGRPGCSCGSRGS*TSWQWS
Trigger: AGACCACTGCCATGAAGTGCAGGAGCCCCGGCTGCC...GCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCGTGCCTTGTGTGGTCTaGGGCGTGGCTGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: DADTPCRAPRCGRPGCSCVPCVV*GVAGVK
Trigger: CTTCACGCCAGCCACGCCCCAGACCACACAAGGCAC...GCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGGGAGGCGACGCTCCATaGACGCCTGGGGTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSGGDAP*TPGVGL
Trigger: GAGCCCGACCCCAGGCGTCCATGGAGCGTCGCCTCC...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612899.5
3UTR CAA 72 bp CAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTaGGGCCTTGAGGTGCTTTGTGTGGTTCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: QARMFLQEARAH*GLEVLCVVRGT
Trigger: TGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CTGGAGGCAGGCTTGGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGAGAAGTGGCATGCATaGGGCAATTGCCGTCACCGT +
Preference number: 4 (lower is better)
Translates to: LEAGLALPGIQVPCVVWGEKWHA*GNCRHR
Trigger: ACGGTGACGGCAATTGCCTCATGCATGCCACTTCTC...GCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR TCA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCGGGTGTTCACAGACATaGAGAAGGGGCAGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFGCSQT*RRGSWA
Trigger: CGCCCAACTGCCCCTTCTTCATGTCTGTGAACACCC...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTTGCAGAGCTCCTCGCTaGGGCAGGCCAGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPCRAPR*GRPGCS
Trigger: AGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTATGGTTCTGCATTTCTaGCGGGTCCTCAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: ELLAAAGQDVLAGGPGALMVLHF*RVLRKG
Trigger: TCCTTTCCTGAGGACCCGGCAGAAATGCAGAACCAT...AAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCGGCCCATCCTCTGGTTaGGATGCTGACACTCCATGC +
Preference number: 4 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFGPSSG*DADTPC
Trigger: GCATGGAGTGTCAGCATCCCAACCAGAGGATGGGCC...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCGGAGGGGAGGTGGAATaGCTCTGGCTTCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: DADTPCRAPRCGRPGCSCGGEVE*LWLLQP
Trigger: GGGTTGGAGAAGCCAGAGCCATTCCACCTCCCCTCC...GCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGCGCTCCATGGACGCCTaGGGTCGGGCTCGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLRSMDA*GRARSL
Trigger: CAGCGAGCGAGCCCGACCCCAGGCGTCCATGGAGCG...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612899.5
3UTR CAA 72 bp GGATGTTCTTGCAGGAGGCCCGGGCGCACTTGGGCCTaGAGGTGCTTTGTGTGGTTCGAGGCACATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GCSCRRPGRTWA*RCFVWFEAHLC
Trigger: GCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TCCTCTGGTTGGGATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGCGGCATTGATGAGATaGGTTGTGCCATGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSGWDADTPCRAPRCGRPAALMR*VVPWSQ
Trigger: CTGGGACCATGGCACAACTCATCTCATCAATGCCGC...TGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTGGGTGTTCACAGACATaGAGAAGGGGCAGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPGCSQT*RRGSWA
Trigger: CGCCCAACTGCCCCTTCTTCATGTCTGTGAACACCC...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATGCTGCACATTCAGTGTaGAGGGGCAGCCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LHFCRVLRKGTGQVGKNHAAHSV*RGSRGS
Trigger: GGAGCCCCGGCTGCCCCTTCACACTGAATGTGCAGC...ATGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGAGGCCCTTCCCGGGATCCAAGTaGCTTGTGTGGTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: WQLRGSEDSTMMTDSSRPFPGSK*LVWSGA
Trigger: CGCCCCAGACCACACAAGGCACTTGGATCCCGGGAA...GGGCCTCGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGTGGTGCTTCCAAGGGTaGCGCATTCCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGEWCFQG*RIPSPG
Trigger: GCCTGGGGAGGGAATGCGGCACCCTTGGAAGCACCA...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGAGGCCCTGCAGAGCTCCTCGCTaGGGCAGGCCAGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: WQLRGSEDSTMMTDSSRPCRAPR*GRPGCS
Trigger: AGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA...GGGCCTCGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGCAGGGTACCATGGGATaGAGGGGACTTCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGEQGTMG*RGLPSP
Trigger: GGGGCTGGGAAGTCCCCTGCATCCCATGGTACCCTG...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp CTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGTGAAGTTGCCATGGTCCCAGCCTTaGACGGGGATTTCTATCACC +
Preference number: 4 (lower is better)
Translates to: LPGIQVPCVVWGVAGVKLPWSQP*TGISIT
Trigger: GGTGATAGAAATCCCCGTCCAAGGCTGGGACCATGG...CAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CCA 90 bp CTGGAGGCAGGCTTGGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCTCCATGAGAGAAAGCTaGGGCACGGAAGGTTCCATG +
Preference number: 4 (lower is better)
Translates to: LEAGLALPGIQVPCVVWGSMRES*GTEGSM
Trigger: CATGGAACCTTCCGTGCCCCAGCTTTCTCTCATGGA...GCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CCA 90 bp TGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGAGGCCCTCCTGGAGGCAGGCTTaGCACTTCCCGGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: WQLRGSEDSTMMTDSSRPSWRQA*HFPGSK
Trigger: CTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGA...GGGCCTCGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GCCCATCCTCTGGTTGGGATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGTCCTGGTAACATCCTaGAGGCAGGCTTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: AHPLVGMLTLHAELLAAAVLVTS*RQAWHF
Trigger: GAAGTGCCAAGCCTGCCTCCAGGATGTTACCAGGAC...TGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCCTTTCTAAGGCCACCTaGGAACACTCCCGGGTTACC +
Preference number: 4 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFLSKAT*EHSRVT
Trigger: GGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CAA 72 bp GTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGTGAAGTaGCCGGGCGTTGTGGCAACGTTCACAAAATCCGTT +
Preference number: 4 (lower is better)
Translates to: VPCVVWGVAGVK*PGVVATFTKSV
Trigger: AACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR TCA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTACGCCCCACATGTACTaGGAAGTGGCATGCATGAGG +
Preference number: 4 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPTPHMY*EVACMR
Trigger: CCTCATGCATGCCACTTCTCAGTACATGTGGGGCGT...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCTTTGGGAGTTTGTTTTaGTTCTTTTGCCGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CRAPRCGRPGCSCRRPGRFGSLF*FFCRLS
Trigger: AGAGAGGCGGCAAAAGAATCAAAACAAACTCCCAAA...GCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CATGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGAGGAGTCCGTGCAGCTTaGGACAGGCAGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HGYWLLLSQYQGTMGCRGGVRAA*DRQPAG
Trigger: CCCTGCTGGCTGCCTGTCTCAAGCTGCACGGACTCC...TCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR TCA 90 bp GGGGAGGTGGAATGGCTCTGGCTTCTCCAACCCACGCGACTTGTGTGTCTTTTCTGGACGCTGTGGGACTaGCTTTCCCTGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GEVEWLWLLQPTRLVCLFWTLWD*LSLRQQ
Trigger: CTGCTGCCTCAGGGAAAGTCAGTCCCACAGCGTCCA...GAAAAGACACACAAGTCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTTCTCAGCCAAGACGATaGAGCAGTCCTGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPSQPRR*SSPDAQ
Trigger: CTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGA...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGCGCAGCCGGCTTTTCTaGACTTGCTCGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSRSRLF*TCSSPS
Trigger: GGACGGGGACGAGCAAGTGCAGAAAAGCCGGCTGCG...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATCGCAGCCGGCTTTTCTaGACTTGCTCGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LHFCRVLRKGTGQVGKNHRSRLF*TCSSPS
Trigger: GGACGGGGACGAGCAAGTGCAGAAAAGCCGGCTGCG...ATGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACAGGCCAGGATGTTCTTaGAGGAGGCCCGGGCGCACT +
Preference number: 4 (lower is better)
Translates to: KFLASCLVGEEEPWAESDRPGCS*RRPGRT
Trigger: AGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCT...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGTGGTCAGGAACTTaGCCACAGCCTGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFLWSGT*PQPDSK
Trigger: CTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAG...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGCACGGAAGGTTCCATaGGATTCTGGGCGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGEARKVP*DSGRAP
Trigger: AGGGGCACGCCCAGAATCCCATGGAACCTTCCGTGC...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCTCCATGAGAGAAAGCTaGGGCACGGAAGGTTCCATG +
Preference number: 4 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFSMRES*GTEGSM
Trigger: CATGGAACCTTCCGTGCCCCAGCTTTCTCTCATGGA...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGTCTGGGGCGTGGCTaGCGTGAAGTTGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQGLGRG*REVAGR
Trigger: ACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACC...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATTCCAAGTGCCTTGTGTaGTCTGGGGCGTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LHFCRVLRKGTGQVGKNHSKCLV*SGAWLA
Trigger: CGCCAGCCACGCCCCAGACCACACAAGGCACTTGGA...ATGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGAGGCCCTCGTTTCCAGCTCTGTaGCAAGAATGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WQLRGSEDSTMMTDSSRPSFPAL*QECGEG
Trigger: CCCCTCCCCGCATTCTTGCCACAGAGCTGGAAACGA...GGGCCTCGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGCAGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCCACGGAATGGTGTTCTaGAACCTGGACGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: CSSRCTWHCQNDHRRGPGHGMVF*NLDAVG
Trigger: TCCCACAGCGTCCAGGTTCCAGAACACCATTCCGTG...GCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCCTTTCTAAGGCCACCTaGGAACACTCCCGGGTTACC +
Preference number: 4 (lower is better)
Translates to: DADTPCRAPRCGRPGCSCLSKAT*EHSRVT
Trigger: GGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG...GCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCTCCAGTGAGTTGTACTaGAGTCCACTTCGGGCCATG +
Preference number: 4 (lower is better)
Translates to: DADTPCRAPRCGRPGCSCSSELY*SPLRAM
Trigger: CATGGCCCGAAGTGGACTTCAGTACAACTCACTGGA...GCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCAGGCGCACTTGGGCCTTaGGGTGCTTTGTGTGGTTCG +
Preference number: 4 (lower is better)
Translates to: SAFLPGPQERNRAGREKPGALGP*GALCGS
Trigger: CGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCC...TGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGCTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGTTGGCATTGCCAAAATaGTCACAGGCGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: CFLRPPGNTPGLPNLSIVLALPK*SQAGAR
Trigger: CCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAA...CACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GGAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTGCTCTGTGGCAAGAATaGGGGGAGGGGCTCCGGACG +
Preference number: 4 (lower is better)
Translates to: GEEEPWAESDIIPCQLQAALWQE*GEGLRT
Trigger: CGTCCGGAGCCCCTCCCCGCATTCTTGCCACAGAGC...AGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGGTCCCCAGGAGTCCGTaGAGCTTGAGACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLVPRSP*SLRQAA
Trigger: GGCTGCCTGTCTCAAGCTGCACGGACTCCTGGGGAC...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGACTTGGTGCTTCCAAGGGTaGCGCATTCCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WLLAFAVPIPGYHGMQGTWCFQG*RIPSPG
Trigger: GCCTGGGGAGGGAATGCGGCACCCTTGGAAGCACCA...AGTCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR GCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGTGCAGAGCTCCTCGCTaGGGCAGGCCAGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSCRAPR*GRPGCS
Trigger: AGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGCTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGTGCAGAGCTCCTCGCTaGGGCAGGCCAGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: CFLRPPGNTPGLPNLSIVCRAPR*GRPGCS
Trigger: AGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA...CACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CTGGAGGCAGGCTTGGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCACTGAAAGCATTCGTTaGAGTAGCCGTTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LEAGLALPGIQVPCVVWGTESIR*SSRCTW
Trigger: CCAAGTGCAACGGCTACTGCAACGAATGCTTTCAGT...GCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR GCA 90 bp GATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAAGTTCCTGGCCTCCTaGTTGGTAGGAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: DADTPCRAPRCGRPGCSCKFLAS*LVGEEE
Trigger: TTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT...GCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGCAGGGTACCATGGGATaGAGGGGACTTCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLQGTMG*RGLPSP
Trigger: GGGGCTGGGAAGTCCCCTGCATCCCATGGTACCCTG...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp TCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCAGCACGGAAGGTTCCATaGGATTCTGGGCGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SAFLPGPQERNRAGREKPARKVP*DSGRAP
Trigger: AGGGGCACGCCCAGAATCCCATGGAACCTTCCGTGC...TGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTGGTCTGGGGCGTGGCTaGCGTGAAGTTGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCGLGRG*REVAGR
Trigger: ACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACC...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCGGTCTGGGGCGTGGCTaGCGTGAAGTTGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: KCIKEANLLPVVRNLPTAGLGRG*REVAGR
Trigger: ACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACC...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CCCACGCGACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCGTGCCTTGTGTGGTCTaGGGCGTGGCTGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PTRLVCLFPFSAKTMKQSVPCVV*GVAGVK
Trigger: CTTCACGCCAGCCACGCCCCAGACCACACAAGGCAC...GGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGTCGCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGTCCTGGAGGCAGGCTTaGCACTTCCCGGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSSWRQA*HFPGSK
Trigger: CTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGA...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCAACGTCCTGGTAACATCCTaGAGGCAGGCTTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: SSRCTWHCQNDHRRGPGNVLVTS*RQAWHF
Trigger: GAAGTGCCAAGCCTGCCTCCAGGATGTTACCAGGAC...GTTGCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGTCGTTTCCAGCTCTGTaGCAAGAATGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LSKATWEHSRVTKPEHRGSFPAL*QECGEG
Trigger: CCCCTCCCCGCATTCTTGCCACAGAGCTGGAAACGA...CCCACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGAGGCCCGGCACATCTCTGCGCTaGCTCGATCTCAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: WQLRGSEDSTMMTDSSRPGTSLR*LDLSCS
Trigger: AGAGCAACTGAGATCGAGCCAGCGCAGAGATGTGCC...GGGCCTCGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGAGCCCACTGTTGCAGTaGCAGCTGAGGGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSKATWEHSRVTKPEHRGSPLLQ*QLRGSE
Trigger: CTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCT...CCCACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGGGAGGGGAGGTGGAATaGCTCTGGCTTCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSGGEVE*LWLLQP
Trigger: GGGTTGGAGAAGCCAGAGCCATTCCACCTCCCCTCC...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGTCGGGCTCGCTCGCTaGCAGGGTCGGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCVGLAR*QGRLGV
Trigger: CACCCCCAGCCGACCCTGCCAGCGAGCGAGCCCGAC...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612899.5
3UTR CAA 72 bp AGTTGCCGGGCGTTGTGGCAACGTTCACAAAATCCGTaGTGCTGCACATTCAGTGTGAAGGGGCAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SCRALWQRSQNP*CCTFSVKGQPG
Trigger: CCCCGGCTGCCCCTTCACACTGAATGTGCAGCACAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR TCA 90 bp CTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGTGAAGTTGCTCAAATACAAAGCCTaGGGAAGGACTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LPGIQVPCVVWGVAGVKLLKYKA*GRTCSA
Trigger: GGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGAG...CAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR TCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGTGGCAGTGGTCTCACTaGACAGAAAAGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGEWQWSH*TEKGWV
Trigger: CACCCAGCCCTTTTCTGTTCAGTGAGACCACTGCCA...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGGGGCGTGGCTGGCGTaGAGTTGCCGGGCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: QKCIKEANLLPVVRNLPTGAWLA*SCRALW
Trigger: CCACAACGCCCGGCAACTTCACGCCAGCCACGCCCC...TGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CTGGCTCGATCTCAGTTGCTCTTCTGTCCTTTTGGCCTCATGAAATCTCTGATTGGGGCGTGGCTGGCGTaGAGTTGCCGGGCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LARSQLLFCPFGLMKSLIGAWLA*SCRALW
Trigger: CCACAACGCCCGGCAACTTCACGCCAGCCACGCCCC...AATCAGAGATTTCATGAGGCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCGGAGTCCGTGCAGCTTaGGACAGGCAGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KCIKEANLLPVVRNLPTAGVRAA*DRQPAG
Trigger: CCCTGCTGGCTGCCTGTCTCAAGCTGCACGGACTCC...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTGGGACTGACTTTCCCTaGGGCAGCAGCAAAATGTTT +
Preference number: 4 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPGTDFP*GSSKMF
Trigger: AAACATTTTGCTGCTGCCTCAGGGAAAGTCAGTCCC...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGGGCGCACTTGGGCCTTaGGGTGCTTTGTGTGGTTCG +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLGALGP*GALCGS
Trigger: CGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCC...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGCTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGCTCTGGTTGGGATGCTaGCACTCCATGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CFLRPPGNTPGLPNLSIVLWLGC*HSMQSS
Trigger: GGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAG...CACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGCCGGGTTACCAAACCTaGGCATCGTGGGCACCACGA +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLPGYQT*ASWAPR
Trigger: TCGTGGTGCCCACGATGCTCAGGTTTGGTAACCCGG...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCAGCACGAAACATCGATaGATATGTATGTATACCTTG +
Preference number: 4 (lower is better)
Translates to: CRAPRCGRPGCSCRRPGRSTKHR*ICMYTL
Trigger: CAAGGTATACATACATATTCATCGATGTTTCGTGCT...GCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAGGCCCCGAGCGCCATaGCAGGGAGCCCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VYLGCNSFFPGEASKSVSRPRAP*QGAPQG
Trigger: GCCCTGAGGGGCTCCCTGGCATGGCGCTCGGGGCCT...TGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCCTCTGGTTGGGATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCACAAAATCCGTTGTGCTaGACATTCAGTGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SSGWDADTPCRAPRCGRPQNPLC*TFSVKG
Trigger: CCCCTTCACACTGAATGTGCAGCACAACGGATTTTG...TGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGGCTCTGTGGCAAGAATaGGGGGAGGGGCTCCGGACG +
Preference number: 4 (lower is better)
Translates to: EEEPWAESDIIPCQLQALALWQE*GEGLRT
Trigger: CGTCCGGAGCCCCTCCCCGCATTCTTGCCACAGAGC...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAAGCGCAGCCGGCTTTTCTaGACTTGCTCGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LRITVHGWFCISAGSSGKRSRLF*TCSSPS
Trigger: GGACGGGGACGAGCAAGTGCAGAAAAGCCGGCTGCG...CTTTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTTGGCTCGATCTCAGTTaGTCTTCTGTCCTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPWLDLS*SSVLLA
Trigger: GGCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCA...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATAGGCCAGGATGTTCTTaGAGGAGGCCCGGGCGCACT +
Preference number: 4 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHRPGCS*RRPGRT
Trigger: AGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCT...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAGATGCTGACACTCCATaGAGAGCTCCTCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: ASESQSMDGSAFLPGPQEDADTP*RAPRCG
Trigger: GCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC...TTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCATGGTTCTGCATTTCTaGCGGGTCCTCAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: DADTPCRAPRCGRPGCSCMVLHF*RVLRKG
Trigger: TCCTTTCCTGAGGACCCGGCAGAAATGCAGAACCAT...GCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCAACCTGTGGTCAGGAACTTaGCCACAGCCTGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: SSRCTWHCQNDHRRGPGNLWSGT*PQPDSK
Trigger: CTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAG...GTTGCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGTTCCATGGGATTCTaGGCGTGCCCCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLGSMGF*ACPSLL
Trigger: GAGGAGAGAGGGGCACGCCCAGAATCCCATGGAACC...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAGGTCTGGGGCGTGGCTaGCGTGAAGTTGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPGLGRG*REVAGR
Trigger: ACGCCCGGCAACTTCACGCCAGCCACGCCCCAGACC...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GGGCAGGCCAGTGGAGAGGCAAGTAAATTCCACCCACTTTCAAAGGGGCGAAATTCCTGGAGGCAGGCTTaGCACTTCCCGGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: GQASGEASKFHPLSKGRNSWRQA*HFPGSK
Trigger: CTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGA...ATTTCGCCCCTTTGAAAGTGGGTGGAATTTACTTGCCTCTCCACTGGCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CCA 90 bp GGGGAGGTGGAATGGCTCTGGCTTCTCCAACCCACGCGACTTGTGTGTCTTTTCGGCACATCTCTGCGCTaGCTCGATCTCAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GEVEWLWLLQPTRLVCLFGTSLR*LDLSCS
Trigger: AGAGCAACTGAGATCGAGCCAGCGCAGAGATGTGCC...GAAAAGACACACAAGTCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATAGGCCCGGGCGCACTTaGGCCTTGAGGTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHRPGRT*ALRCFV
Trigger: CACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCT...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATGAGGTGGAATGGCTCTaGCTTCTCCAACCCACGCGA +
Preference number: 4 (lower is better)
Translates to: LHFCRVLRKGTGQVGKNHEVEWL*LLQPTR
Trigger: TCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTC...ATGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTCCAATTTACTCCCTGTaGTCAGGAACTTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPPIYSL*SGTCPQ
Trigger: CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGG...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CAA 72 bp CTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTaGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACC +
Preference number: 4 (lower is better)
Translates to: LSSPAQTPLSPL*QWQLRGSEDST
Trigger: GGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
3UTR CAA 72 bp AGCACCATGATGACTGACAGCTCGAGGCCCCACTTCTaGCAGGAGGTGACCCACCTGTTTCCGGTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: STMMTDSSRPHF*QEVTHLFPVSH
Trigger: ATGGCTAACCGGAAACAGGTGGGTCACCTCCTGCAAGAAGTGGGGCCTCGAGCTGTCAGTCATCATGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGCTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGAGAAGTGGCATGCATaGGGCAATTGCCGTCACCGT +
Preference number: 4 (lower is better)
Translates to: CFLRPPGNTPGLPNLSIVEKWHA*GNCRHR
Trigger: ACGGTGACGGCAATTGCCTCATGCATGCCACTTCTC...CACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAGGGGCGTGGCTGGCGTaGAGTTGCCGGGCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: VYLGCNSFFPGEASKSVSGAWLA*SCRALW
Trigger: CCACAACGCCCGGCAACTTCACGCCAGCCACGCCCC...TGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGCTCTGGTTGGGATGCTaGCACTCCATGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLLWLGC*HSMQSS
Trigger: GGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAG...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGCTCTGGTTGGGATGCTaGCACTCCATGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLLWLGC*HSMQSS
Trigger: GGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAG...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AGCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGACTCTGGTTGGGATGCTaGCACTCCATGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLRITVHGWFCISAGSSGLWLGC*HSMQSS
Trigger: GGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAG...TCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAATTGGCATTGCCAAAATaGTCACAGGCGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQLALPK*SQAGAR
Trigger: CCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAA...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CATGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGAAGGGCCTCGCTGCCATaGGGATCTGGCTTCACATCT +
Preference number: 4 (lower is better)
Translates to: HGYWLLLSQYQGTMGCRGRASLP*GSGFTS
Trigger: AGATGTGAAGCCAGATCCTCATGGCAGCGAGGCCCT...TCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR TCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGGGTCGGCTGGGGGTGTaGTCTCTCTTGGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQGRLGV*SLLAAA
Trigger: AGCGGCCGCCAAGAGAGATCACACCCCCAGCCGACC...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612899.5
CDS-3UTR GCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCATGGGATTCTGGGCGTaGCCCTCTCTCCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KCIKEANLLPVVRNLPTAMGFWA*PSLLPC
Trigger: GCAGGGGAGGAGAGAGGGGCACGCCCAGAATCCCAT...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTGGCAGCCGGGGCTCCTaGACTTCATGGCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: YQRGQFTPCGQELAHSLTGSRGS*TSWQWS
Trigger: AGACCACTGCCATGAAGTGCAGGAGCCCCGGCTGCC...AGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GGGGAGGTGGAATGGCTCTGGCTTCTCCAACCCACGCGACTTGTGTGTCTTTTCGCTGGAGGAGGCCTCTaGTGTAGTCCTTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GEVEWLWLLQPTRLVCLFAGGGL*CSPFEA
Trigger: TGCTTCAAAAGGACTACAGCAGAGGCCTCCTCCAGC...GAAAAGACACACAAGTCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAGCTCTGTGGCAAGAATaGGGGGAGGGGCTCCGGACG +
Preference number: 4 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPALWQE*GEGLRT
Trigger: CGTCCGGAGCCCCTCCCCGCATTCTTGCCACAGAGC...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCGCAGCCGGCTTTTCTaGACTTGCTCGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: YQRGQFTPCGQELAHSLTRSRLF*TCSSPS
Trigger: GGACGGGGACGAGCAAGTGCAGAAAAGCCGGCTGCG...AGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGAGGCCAGGATGTTCTTaGAGGAGGCCCGGGCGCACT +
Preference number: 4 (lower is better)
Translates to: EEEPWAESDIIPCQLQALRPGCS*RRPGRT
Trigger: AGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCT...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGATGCTGACACTCCATaGAGAGCTCCTCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQDADTP*RAPRCG
Trigger: GCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGTGCAGAGGGCCTCGCTaGCATGAGGATCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLCRGPR*HEDLAS
Trigger: TGAAGCCAGATCCTCATGGCAGCGAGGCCCTCTGCA...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGGTCCATGGATGGTTCTaGATTTCTGCCGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSKATWEHSRVTKPEHRGVHGWF*ISAGSS
Trigger: TGAGGACCCGGCAGAAATGCAGAACCATCCATGGAC...CCCACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CCCACGCGACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCCCTCAGGGCCCGGCTTaGAGTTCAGCTTTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PTRLVCLFPFSAKTMKQSPQGPA*SSALGV
Trigger: AACTCCCAAAGCTGAACTCCAAGCCGGGCCCTGAGG...GGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGTCGCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGAGTTGCCGGGCGTTGTaGCAACGTTCACAAAATCCG +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGESCRAL*QRSQNP
Trigger: CGGATTTTGTGAACGTTGCCACAACGCCCGGCAACT...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTGTGCCTTGTGTGGTCTaGGGCGTGGCTGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLVPCVV*GVAGVK
Trigger: CTTCACGCCAGCCACGCCCCAGACCACACAAGGCAC...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCAGCGAGGGATCTGACTTaGAACGCTGGTGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: SAFLPGPQERNRAGREKPARDLT*NAGDRK
Trigger: CTTCCTGTCACCAGCGTTCCAAGTCAGATCCCTCGC...TGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATCACGGAATGGTGTTCTaGAACCTGGACGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LHFCRVLRKGTGQVGKNHHGMVF*NLDAVG
Trigger: TCCCACAGCGTCCAGGTTCCAGAACACCATTCCGTG...ATGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCAGGCCCGGGCGCACTTaGGCCTTGAGGTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: KCIKEANLLPVVRNLPTARPGRT*ALRCFV
Trigger: CACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCT...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCAACCCAATTTACTCCCTGTaGTCAGGAACTTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SSRCTWHCQNDHRRGPGNPIYSL*SGTCPQ
Trigger: CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGG...GTTGCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGTGGCAGTGGTCTCACTaGACAGAAAAGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLWQWSH*TEKGWV
Trigger: CACCCAGCCCTTTTCTGTTCAGTGAGACCACTGCCA...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCTGCACATTCAGTGTaGAGGGGCAGCCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QKCIKEANLLPVVRNLPTAAHSV*RGSRGS
Trigger: GGAGCCCCGGCTGCCCCTTCACACTGAATGTGCAGC...TGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGGAGCCGCGAGGGATCTaGCTTGGAACGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: EEEPWAESDIIPCQLQALEPRGI*LGTLVT
Trigger: TGTCACCAGCGTTCCAAGTCAGATCCCTCGCGGCTC...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGGACGCTGTGGGACTaGCTTTCCCTGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLWTLWD*LSLRQQ
Trigger: CTGCTGCCTCAGGGAAAGTCAGTCCCACAGCGTCCA...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCCTCTGGTTGGGATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCATCACAAAATCCGTTGTaGTGCACATTCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SSGWDADTPCRAPRCGRPSQNPL*CTFSVK
Trigger: CTTCACACTGAATGTGCAGCACAACGGATTTTGTGA...TGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGCGGCTTTTCTGCACTTaGTCGTCCCCGTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: EEEPWAESDIIPCQLQALRLFCT*SSPSCP
Trigger: GGGACAGGACGGGGACGAGCAAGTGCAGAAAAGCCG...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCCGGCTTTTCTGCACTTaGTCGTCCCCGTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRRLFCT*SSPSCP
Trigger: GGGACAGGACGGGGACGAGCAAGTGCAGAAAAGCCG...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCGATGCTGACACTCCATaGAGAGCTCCTCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KCIKEANLLPVVRNLPTADADTP*RAPRCG
Trigger: GCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GGGGAGGTGGAATGGCTCTGGCTTCTCCAACCCACGCGACTTGTGTGTCTTTTCGCCAGTTACAAGCTTTaGTTTCTAAGGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: GEVEWLWLLQPTRLVCLFASYKL*FLRPPG
Trigger: CCCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGC...GAAAAGACACACAAGTCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATTGCAGAGGGCCTCGCTaGCATGAGGATCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHCRGPR*HEDLAS
Trigger: TGAAGCCAGATCCTCATGGCAGCGAGGCCCTCTGCA...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGCTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGCTTTCCAGGGTGGCCTaGATGTTTCTGTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: CFLRPPGNTPGLPNLSIVLSRVA*MFLSMR
Trigger: CCTCATCGACAGAAACATCCAGGCCACCCTGGAAAG...CACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCCATAGCCGAGAACAATaGGGTATCTGTAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: DADTPCRAPRCGRPGCSCHSREQ*GICSIP
Trigger: AGGAATGCTACAGATACCCCATTGTTCTCGGCTATG...GCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTCATAGCCGAGAACAATaGGGTATCTGTAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPHSREQ*GICSIP
Trigger: AGGAATGCTACAGATACCCCATTGTTCTCGGCTATG...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTGGTTCCATGGGATTCTaGGCGTGCCCCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLGSMGF*ACPSLL
Trigger: GAGGAGAGAGGGGCACGCCCAGAATCCCATGGAACC...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GGGCAGGCCAGTGGAGAGGCAAGTAAATTCCACCCACTTTCAAAGGGGCGAAATGCGAGGGATCTGACTTaGAACGCTGGTGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: GQASGEASKFHPLSKGRNARDLT*NAGDRK
Trigger: CTTCCTGTCACCAGCGTTCCAAGTCAGATCCCTCGC...ATTTCGCCCCTTTGAAAGTGGGTGGAATTTACTTGCCTCTCCACTGGCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CCA 90 bp GTGAAGTTGCCGGGCGTTGTGGCAACGTTCACAAAATCCGTTGTGCTGCACATTTCCCCAGGCACGGAATaGTGTTCTGGAACCTGGACG +
Preference number: 4 (lower is better)
Translates to: VKLPGVVATFTKSVVLHISPGTE*CSGTWT
Trigger: CGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGA...AATGTGCAGCACAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CCA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTCAATTCCTTCTTTCCTaGGGAGGCAAGCAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPQFLLS*GGKQKC
Trigger: ACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTG...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGAGGCCCATGATCTCCCGAAACTaGGGACAAAACTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: WQLRGSEDSTMMTDSSRPMISRN*GQNWQV
Trigger: AACTTGCCAGTTTTGTCCTCAGTTTCGGGAGATCAT...GGGCCTCGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGAGAAGTGGCATGCATaGGGCAATTGCCGTCACCGT +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQEKWHA*GNCRHR
Trigger: ACGGTGACGGCAATTGCCTCATGCATGCCACTTCTC...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GTGAAGTTGCCGGGCGTTGTGGCAACGTTCACAAAATCCGTTGTGCTGCACATTACGCCCCACATGTACTaGGAAGTGGCATGCATGAGG +
Preference number: 4 (lower is better)
Translates to: VKLPGVVATFTKSVVLHITPHMY*EVACMR
Trigger: CCTCATGCATGCCACTTCTCAGTACATGTGGGGCGT...AATGTGCAGCACAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR TCA 90 bp GGGGAGGTGGAATGGCTCTGGCTTCTCCAACCCACGCGACTTGTGTGTCTTTTCCAAATTCCTGAGATTTaGGAGACTCCAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GEVEWLWLLQPTRLVCLFQIPEI*ETPVAS
Trigger: GCTGGCAACTGGAGTCTCTCAAATCTCAGGAATTTG...GAAAAGACACACAAGTCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CGGGCGCACTTGGGCCTTGAGGTGCTTTGTGTGGTTCGAGGCACATCTCTGCGCGTTTCAACAAATTCCTaGGATTTGAGAGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: RAHLGLEVLCVVRGTSLRVSTNS*DLRDSS
Trigger: ACTGGAGTCTCTCAAATCTCAGGAATTTGTTGAAAC...GCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GCCCATCCTCTGGTTGGGATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGTTTCAACAAATTCCTaGGATTTGAGAGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: AHPLVGMLTLHAELLAAAVSTNS*DLRDSS
Trigger: ACTGGAGTCTCTCAAATCTCAGGAATTTGTTGAAAC...TGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGCGGCATTGATGAGATaGGTTGTGCCATGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQAALMR*VVPWSQ
Trigger: CTGGGACCATGGCACAACTCATCTCATCAATGCCGC...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGTACGTCCATTTTCCCTaGGCTTCCTTGAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGEYVHFP*ASLSFL
Trigger: CAAGAAGCTCAAGGAAGCTCAGGGAAAATGGACGTA...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGGGCAGCCGGGGCTCCTaGACTTCATGGCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQGSRGS*TSWQWS
Trigger: AGACCACTGCCATGAAGTGCAGGAGCCCCGGCTGCC...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCGTCCCCAGGAGTCCGTaGAGCTTGAGACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSVPRSP*SLRQAA
Trigger: GGCTGCCTGTCTCAAGCTGCACGGACTCCTGGGGAC...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCACGGCTTTTCTGCACTTaGTCGTCCCCGTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPRLFCT*SSPSCP
Trigger: GGGACAGGACGGGGACGAGCAAGTGCAGAAAAGCCG...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GGGCAGGCCAGTGGAGAGGCAAGTAAATTCCACCCACTTTCAAAGGGGCGAAATTTCGAGGCACATCTCTaGGCTGGCTCGATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: GQASGEASKFHPLSKGRNFEAHL*AGSISV
Trigger: AACTGAGATCGAGCCAGCGCAGAGATGTGCCTCGAA...ATTTCGCCCCTTTGAAAGTGGGTGGAATTTACTTGCCTCTCCACTGGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR GCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAAAGGCCAGGATGTTCTTaGAGGAGGCCCGGGCGCACT +
Preference number: 4 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQRPGCS*RRPGRT
Trigger: AGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCT...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGCGTTGCAGTAGCCGTTaGACTTGGCATTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGERCSSR*TWHCQN
Trigger: ATTTTGGCAATGCCAAGTGCAACGGCTACTGCAACG...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGTTATCTTTCCTCTCCTaGTCAGACACCCTTAAGCCC +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGELSFLS*SDTLKP
Trigger: GGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATAA...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTTGCAGAGGGCCTCGCTaGCATGAGGATCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCCRGPR*HEDLAS
Trigger: TGAAGCCAGATCCTCATGGCAGCGAGGCCCTCTGCA...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGTGAAGTTGTATGTATACCTTGGATaGAATTCCTTCTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPGIQVPCVVWGVAGVKLYVYLG*NSFFPG
Trigger: CCCAGGAAAGAAGGAATTGCATCCAAGGTATACATA...CAACTTCACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR GCA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGTTTCCCTGTGACCATTaGCAGTCTCATCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLFPCDH*QSHPCS
Trigger: GGAGCAGGGATGAGACTGGCAATGGTCACAGGGAAA...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGATTTCCCTGTGACCATTaGCAGTCTCATCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLRITVHGWFCISAGSSGFPCDH*QSHPCS
Trigger: GGAGCAGGGATGAGACTGGCAATGGTCACAGGGAAA...TCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGCTTTCCAGGGTGGCCTaGATGTTTCTGTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLLSRVA*MFLSMR
Trigger: CCTCATCGACAGAAACATCCAGGCCACCCTGGAAAG...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTGTCCACTTCGGGCCATaGGTGTGTCTGTGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: YQRGQFTPCGQELAHSLTVHFGP*VCLWKP
Trigger: TGGCTTCCACAGACACACCCATGGCCCGAAGTGGAC...AGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAACCATGGTCCCAGCCTTaGACGGGGATTTCTATCACC +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQPWSQP*TGISIT
Trigger: GGTGATAGAAATCCCCGTCCAAGGCTGGGACCATGG...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCCCTCAGGGCCCGGCTTaGAGTTCAGCTTTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: KCIKEANLLPVVRNLPTAPQGPA*SSALGV
Trigger: AACTCCCAAAGCTGAACTCCAAGCCGGGCCCTGAGG...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAAGGTCCTGGTAACATCCTaGAGGCAGGCTTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: LRITVHGWFCISAGSSGKVLVTS*RQAWHF
Trigger: GAAGTGCCAAGCCTGCCTCCAGGATGTTACCAGGAC...CTTTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GGAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTGCGAGGGATCTGACTTaGAACGCTGGTGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: GEEEPWAESDIIPCQLQAARDLT*NAGDRK
Trigger: CTTCCTGTCACCAGCGTTCCAAGTCAGATCCCTCGC...AGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTCGTTTCCAGCTCTGTaGCAAGAATGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLSFPAL*QECGEG
Trigger: CCCCTCCCCGCATTCTTGCCACAGAGCTGGAAACGA...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAACACGGAATGGTGTTCTaGAACCTGGACGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQHGMVF*NLDAVG
Trigger: TCCCACAGCGTCCAGGTTCCAGAACACCATTCCGTG...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTTCCCCAGGCACGGAATaGTGTTCTGGAACCTGGACG +
Preference number: 4 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCSPGTE*CSGTWT
Trigger: CGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGA...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATCTTTCTAAGGCCACCTaGGAACACTCCCGGGTTACC +
Preference number: 4 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHLSKAT*EHSRVT
Trigger: GGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGGGAGAGGAGGAACCTTaGGCTGAATCTGACATCATC +
Preference number: 4 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSGEEEP*AESDII
Trigger: GATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCACTCAAATACAAAGCCTaGGGAAGGACTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SAFLPGPQERNRAGREKPLKYKA*GRTCSA
Trigger: GGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGAG...TGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTGCGGCATTGATGAGATaGGTTGTGCCATGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCAALMR*VVPWSQ
Trigger: CTGGGACCATGGCACAACTCATCTCATCAATGCCGC...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGCACATTTTACATCCATaGGAGAAAGCTGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLHILHP*EKAGAR
Trigger: CCGTGCCCCAGCTTTCTCTCATGGATGTAAAATGTG...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAAGAGCCGCGAGGGATCTaGCTTGGAACGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQEPRGI*LGTLVT
Trigger: TGTCACCAGCGTTCCAAGTCAGATCCCTCGCGGCTC...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATGGAGTCCGTGCAGCTTaGGACAGGCAGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHGVRAA*DRQPAG
Trigger: CCCTGCTGGCTGCCTGTCTCAAGCTGCACGGACTCC...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGTTGGCATTGCCAAAATaGTCACAGGCGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQLALPK*SQAGAR
Trigger: CCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAA...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCTGTTGCAGTGGCAGCTaGGGGGTTCAGAGGATAGCA +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRCCSGS*GVQRIA
Trigger: TGCTATCCTCTGAACCCCTCAGCTGCCACTGCAACA...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAACGATGAAGCAGTCCTaGTGCGCAGGGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VYLGCNSFFPGEASKSVSTMKQS*CAGCRG
Trigger: GCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGT...TGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGAGGCCCACTACAAACACTCTCTaGATACGTCCATTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: WQLRGSEDSTMMTDSSRPTTNTL*IRPFSL
Trigger: CAGGGAAAATGGACGTATTCAGAGAGTGTTTGTAGT...GGGCCTCGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCAACTTGAGAGACTCCAGTTaGCAGCGGAATTTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SSRCTWHCQNDHRRGPGNLRDSS*QRNLKL
Trigger: CAACTTTAAATTCCGCTGGCAACTGGAGTCTCTCAA...GTTGCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGTTCCCGGGATCCAAGTaGCTTGTGTGGTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQFPGSK*LVWSGA
Trigger: CGCCCCAGACCACACAAGGCACTTGGATCCCGGGAA...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ACCTGTTTCCGGTTAGCCATACATCTGCTTGAACTGAAAGCATTCGTTGCAGTAGTCCCCAGGAGTCCGTaGAGCTTGAGACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TCFRLAIHLLELKAFVAVVPRSP*SLRQAA
Trigger: GGCTGCCTGTCTCAAGCTGCACGGACTCCTGGGGAC...TACTGCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCTAACCGGAAACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTTGGTGCTTCCAAGGGTaGCGCATTCCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AIPSFLGRQAKVYQRGQFWCFQG*RIPSPG
Trigger: GCCTGGGGAGGGAATGCGGCACCCTTGGAAGCACCA...AAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGGATGCTGACACTCCATaGAGAGCTCCTCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQDADTP*RAPRCG
Trigger: GCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATC...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACCGTTGCAGTAGCCGTTaGACTTGGCATTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: KFLASCLVGEEEPWAESDRCSSR*TWHCQN
Trigger: ATTTTGGCAATGCCAAGTGCAACGGCTACTGCAACG...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAAAGTTCCTGGCCTCCTaGTTGGTAGGAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQKFLAS*LVGEEE
Trigger: TTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATAAGTTCCTGGCCTCCTaGTTGGTAGGAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHKFLAS*LVGEEE
Trigger: TTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CATGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGAATGGTTCTGCATTTCTaGCGGGTCCTCAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: HGYWLLLSQYQGTMGCRGMVLHF*RVLRKG
Trigger: TCCTTTCCTGAGGACCCGGCAGAAATGCAGAACCAT...TCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR GCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGATGGTTCTGCATTTCTaGCGGGTCCTCAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLMVLHF*RVLRKG
Trigger: TCCTTTCCTGAGGACCCGGCAGAAATGCAGAACCAT...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGTCCATGGATGGTTCTaGATTTCTGCCGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQVHGWF*ISAGSS
Trigger: TGAGGACCCGGCAGAAATGCAGAACCATCCATGGAC...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGCAGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCAGCTGGTTGAGTTTATaGAAGCAGTGTATACACAAG +
Preference number: 4 (lower is better)
Translates to: CSSRCTWHCQNDHRRGPGSWLSL*KQCIHK
Trigger: CTTGTGTATACACTGCTTGCATAAACTCAACCAGCT...GCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAACTGTGGTCAGGAACTTaGCCACAGCCTGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQLWSGT*PQPDSK
Trigger: CTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAG...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGCATAGCCGAGAACAATaGGGTATCTGTAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGEHSREQ*GICSIP
Trigger: AGGAATGCTACAGATACCCCATTGTTCTCGGCTATG...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCCCATGGTCCCAGCCTTaGACGGGGATTTCTATCACC +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRPWSQP*TGISIT
Trigger: GGTGATAGAAATCCCCGTCCAAGGCTGGGACCATGG...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TCCTCTGGTTGGGATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGGCCACTTGGAGTTCAGCTTTaGGAGTTTGTTTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: SSGWDADTPCRAPRCGRPLGVQL*EFVLIL
Trigger: AAGAATCAAAACAAACTCCCAAAGCTGAACTCCAAG...TGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCACCTCAGGGCCCGGCTTaGAGTTCAGCTTTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPPQGPA*SSALGV
Trigger: AACTCCCAAAGCTGAACTCCAAGCCGGGCCCTGAGG...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCATCCAAGTGCCTTGTGTaGTCTGGGGCGTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VYLGCNSFFPGEASKSVSSKCLV*SGAWLA
Trigger: CGCCAGCCACGCCCCAGACCACACAAGGCACTTGGA...TGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATCCTGGAGGCAGGCTTaGCACTTCCCGGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQSWRQA*HFPGSK
Trigger: CTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGA...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGCACGGAATGGTGTTCTaGAACCTGGACGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: EEEPWAESDIIPCQLQALHGMVF*NLDAVG
Trigger: TCCCACAGCGTCCAGGTTCCAGAACACCATTCCGTG...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGCTTTCTAAGGCCGGCCCATCCTCTGGTTaGGATGCTGACACTCCATGC +
Preference number: 4 (lower is better)
Translates to: WAESDIIPCQLQALLSKAGPSSG*DADTPC
Trigger: GCATGGAGTGTCAGCATCCCAACCAGAGGATGGGCC...GGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGAGAGGAGGAACCTTaGGCTGAATCTGACATCATC +
Preference number: 4 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLGEEEP*AESDII
Trigger: GATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGCTTTCTAAGGCCGAGGTGGAATGGCTCTaGCTTCTCCAACCCACGCGA +
Preference number: 4 (lower is better)
Translates to: WAESDIIPCQLQALLSKAEVEWL*LLQPTR
Trigger: TCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTC...GGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CATGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGACTTCTCGACACCAGTTaGGTTTCTTCTGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: HGYWLLLSQYQGTMGCRGLLDTS*VSSGFP
Trigger: TGGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAG...TCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR TCA 90 bp CTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGGTGTATTTCTTCCAGTaGGTTGTACTGAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: LSKATWEHSRVTKPEHRGVYFFQ*VVLKST
Trigger: AGTGGACTTCAGTACAACTCACTGGAAGAAATACAC...CCCACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTGCTGCACATTCAGTGTaGAGGGGCAGCCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPAAHSV*RGSRGS
Trigger: GGAGCCCCGGCTGCCCCTTCACACTGAATGTGCAGC...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGCAAGCAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTAGAGCCGCGAGGGATCTaGCTTGGAACGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: CKQCIHKLMPQQQPENRLEPRGI*LGTLVT
Trigger: TGTCACCAGCGTTCCAAGTCAGATCCCTCGCGGCTC...TAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGGAGTCCGTGCAGCTTaGGACAGGCAGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKGVRAA*DRQPAG
Trigger: CCCTGCTGGCTGCCTGTCTCAAGCTGCACGGACTCC...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTCCGGGTTACCAAACCTaGGCATCGTGGGCACCACGA +
Preference number: 4 (lower is better)
Translates to: AIPSFLGRQAKVYQRGQFPGYQT*ASWAPR
Trigger: TCGTGGTGCCCACGATGCTCAGGTTTGGTAACCCGG...AAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAAAGGGCCTCGCTGCCATaGGGATCTGGCTTCACATCT +
Preference number: 4 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQRASLP*GSGFTS
Trigger: AGATGTGAAGCCAGATCCTCATGGCAGCGAGGCCCT...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTAGGGCCTCGCTGCCATaGGGATCTGGCTTCACATCT +
Preference number: 4 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCRASLP*GSGFTS
Trigger: AGATGTGAAGCCAGATCCTCATGGCAGCGAGGCCCT...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGTACGTCCATTTTCCCTaGGCTTCCTTGAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLYVHFP*ASLSFL
Trigger: CAAGAAGCTCAAGGAAGCTCAGGGAAAATGGACGTA...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGTGCTCGCTGTTTTCCTaGCATTTCTTGTACTCATGC +
Preference number: 4 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSCSLFS*HFLYSC
Trigger: GCATGAGTACAAGAAATGGCAGGAAAACAGCGAGCA...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGACAAAATCCGTTGTGCTaGACATTCAGTGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SLRITVHGWFCISAGSSGQNPLC*TFSVKG
Trigger: CCCCTTCACACTGAATGTGCAGCACAACGGATTTTG...TCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGCAAGCAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATTCCCGGGATCCAAGTaGCTTGTGTGGTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: CKQCIHKLMPQQQPENRLFPGSK*LVWSGA
Trigger: CGCCCCAGACCACACAAGGCACTTGGATCCCGGGAA...TAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCGCTGGAGGAGGCCTCTaGTGTAGTCCTTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRAGGGL*CSPFEA
Trigger: TGCTTCAAAAGGACTACAGCAGAGGCCTCCTCCAGC...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGGCTGGAGGAGGCCTCTaGTGTAGTCCTTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: EEEPWAESDIIPCQLQALAGGGL*CSPFEA
Trigger: TGCTTCAAAAGGACTACAGCAGAGGCCTCCTCCAGC...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CATGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGAATCCTTCAAACATGGTaGTTCCAAGGGTGCCGCATT +
Preference number: 4 (lower is better)
Translates to: HGYWLLLSQYQGTMGCRGILQTW*FQGCRI
Trigger: AATGCGGCACCCTTGGAAGCACCATGTTTGAAGGAT...TCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR GCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGATCCTTCAAACATGGTaGTTCCAAGGGTGCCGCATT +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLILQTW*FQGCRI
Trigger: AATGCGGCACCCTTGGAAGCACCATGTTTGAAGGAT...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGCGTTGCAGTAGCCGTTaGACTTGGCATTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLRCSSR*TWHCQN
Trigger: ATTTTGGCAATGCCAAGTGCAACGGCTACTGCAACG...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CCCACGCGACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCACTGAAAGCATTCGTTaGAGTAGCCGTTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: PTRLVCLFPFSAKTMKQSTESIR*SSRCTW
Trigger: CCAAGTGCAACGGCTACTGCAACGAATGCTTTCAGT...GGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGTCGCGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCGTCCATGGATGGTTCTaGATTTCTGCCGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRVHGWF*ISAGSS
Trigger: TGAGGACCCGGCAGAAATGCAGAACCATCCATGGAC...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCTTTCCCTGTGACCATTaGCAGTCTCATCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRFPCDH*QSHPCS
Trigger: GGAGCAGGGATGAGACTGGCAATGGTCACAGGGAAA...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGATGGTTACTGGCTTTTaGTGTCCCAATACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSMVTGF*CPNTRV
Trigger: TACCCTGGTATTGGGACAGCAAAAGCCAGTAACCAT...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCCTTTCCAGGGTGGCCTaGATGTTTCTGTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: KCIKEANLLPVVRNLPTALSRVA*MFLSMR
Trigger: CCTCATCGACAGAAACATCCAGGCCACCCTGGAAAG...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGCAAGCAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTAGCACGGAAGGTTCCATaGGATTCTGGGCGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: CKQCIHKLMPQQQPENRLARKVP*DSGRAP
Trigger: AGGGGCACGCCCAGAATCCCATGGAACCTTCCGTGC...TAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGTCCAAGTGCCTTGTGTaGTCTGGGGCGTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKSKCLV*SGAWLA
Trigger: CGCCAGCCACGCCCCAGACCACACAAGGCACTTGGA...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACATCGTTTCCAGCTCTGTaGCAAGAATGCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QKCIKEANLLPVVRNLPTSFPAL*QECGEG
Trigger: CCCCTCCCCGCATTCTTGCCACAGAGCTGGAAACGA...TGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATCCCCAGGCACGGAATaGTGTTCTGGAACCTGGACG +
Preference number: 4 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQSPGTE*CSGTWT
Trigger: CGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGA...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGCTTTCTAAGGCCGGCACATCTCTGCGCTaGCTCGATCTCAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: WAESDIIPCQLQALLSKAGTSLR*LDLSCS
Trigger: AGAGCAACTGAGATCGAGCCAGCGCAGAGATGTGCC...GGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGGCCCGGGCGCACTTaGGCCTTGAGGTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SMNMYVYLGCNSFFPGEARPGRT*ALRCFV
Trigger: CACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCT...TGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGGCCCGGGCGCACTTaGGCCTTGAGGTGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: YTLDAIPSFLGRQAKVYQRPGRT*ALRCFV
Trigger: CACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCT...TTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGGGCCCATCCTCTGGTTaGGATGCTGACACTCCATGC +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQGPSSG*DADTPC
Trigger: GCATGGAGTGTCAGCATCCCAACCAGAGGATGGGCC...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GGAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTATCACAGTCCATGGATaGTTCTGCATTTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GEEEPWAESDIIPCQLQAITVHG*FCISAG
Trigger: CCCGGCAGAAATGCAGAACCATCCATGGACTGTGAT...AGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGGCTGGCAGGGTCGGCTaGGGGTGTGATCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKAGRVG*GCDLSW
Trigger: CCAAGAGAGATCACACCCCCAGCCGACCCTGCCAGC...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612899.5
3UTR CAA 72 bp GCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTaGCTTTCTAAGGCCACCTGGGAACACTCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: AESDIIPCQLQA*LSKATWEHSRV
Trigger: AACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAAGCAAATTCCTGAGATTTaGGAGACTCCAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRITVHGWFCISAGSSGKQIPEI*ETPVAS
Trigger: GCTGGCAACTGGAGTCTCTCAAATCTCAGGAATTTG...CTTTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACGTGTATTTCTTCCAGTaGGTTGTACTGAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: KFLASCLVGEEEPWAESDVYFFQ*VVLKST
Trigger: AGTGGACTTCAGTACAACTCACTGGAAGAAATACAC...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTCACATTTTACATCCATaGGAGAAAGCTGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLHILHP*EKAGAR
Trigger: CCGTGCCCCAGCTTTCTCTCATGGATGTAAAATGTG...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCCACATTTTACATCCATaGGAGAAAGCTGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRHILHP*EKAGAR
Trigger: CCGTGCCCCAGCTTTCTCTCATGGATGTAAAATGTG...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGGGCGCACTTGGGCCTTaGGGTGCTTTGTGTGGTTCG +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKGALGP*GALCGS
Trigger: CGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCC...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AGCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAGCCATACATCTGCTTaGACTGAAAGCATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: SLRITVHGWFCISAGSSGSHTSA*TESIRC
Trigger: GCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCT...TCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATGTTGCAGTGGCAGCTaGGGGGTTCAGAGGATAGCA +
Preference number: 4 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQCCSGS*GVQRIA
Trigger: TGCTATCCTCTGAACCCCTCAGCTGCCACTGCAACA...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCTCTCAGCCAAGACGATaGAGCAGTCCTGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSSQPRR*SSPDAQ
Trigger: CTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGA...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GGGGAGGTGGAATGGCTCTGGCTTCTCCAACCCACGCGACTTGTGTGTCTTTTCGTTTTTCTGTCAATGTaGACATGTTCAGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GEVEWLWLLQPTRLVCLFVFLSM*TCSVSA
Trigger: TGCTGAGACTGAACATGTTCACATTGACAGAAAAAC...GAAAAGACACACAAGTCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGTTCCCGGGATCCAAGTaGCTTGTGTGGTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKFPGSK*LVWSGA
Trigger: CGCCCCAGACCACACAAGGCACTTGGATCCCGGGAA...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATTCTGACATCATCCCTTaGCAGTTACAAGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LHFCRVLRKGTGQVGKNHSDIIP*QLQALL
Trigger: AAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGA...ATGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACTCTGACATCATCCCTTaGCAGTTACAAGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: KFLASCLVGEEEPWAESDSDIIP*QLQALL
Trigger: AAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGA...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGGTATACACAAGCTCATaGCCCAACAACAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSVYTSS*PNNNQK
Trigger: TTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATAC...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GTTTCACATTTTACATCCATGAGAGAAAGCTGGGGCACGGAAGGTTCCATGGGACTTTCCAGGGTGGCCTaGATGTTTCTGTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: VSHFTSMRESWGTEGSMGLSRVA*MFLSMR
Trigger: CCTCATCGACAGAAACATCCAGGCCACCCTGGAAAG...TCCCATGGAACCTTCCGTGCCCCAGCTTTCTCTCATGGATGTAAAATGTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGGTCTCTGTTAACAAGTaGAACAGCTCGGATTTCAGG +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLVSVNK*NSSDFR
Trigger: CCTGAAATCCGAGCTGTTCCACTTGTTAACAGAGAC...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CATGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGAGTCTCTGTTAACAAGTaGAACAGCTCGGATTTCAGG +
Preference number: 4 (lower is better)
Translates to: HGYWLLLSQYQGTMGCRGVSVNK*NSSDFR
Trigger: CCTGAAATCCGAGCTGTTCCACTTGTTAACAGAGAC...TCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp AGCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAGTCTCTGTTAACAAGTaGAACAGCTCGGATTTCAGG +
Preference number: 4 (lower is better)
Translates to: SLRITVHGWFCISAGSSGVSVNK*NSSDFR
Trigger: CCTGAAATCCGAGCTGTTCCACTTGTTAACAGAGAC...TCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGGGTTCCATGGGATTCTaGGCGTGCCCCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKGSMGF*ACPSLL
Trigger: GAGGAGAGAGGGGCACGCCCAGAATCCCATGGAACC...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGCTTTCTAAGGCCTCCATGAGAGAAAGCTaGGGCACGGAAGGTTCCATG +
Preference number: 4 (lower is better)
Translates to: WAESDIIPCQLQALLSKASMRES*GTEGSM
Trigger: CATGGAACCTTCCGTGCCCCAGCTTTCTCTCATGGA...GGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGCCTTGTGTGGTCTaGGGCGTGGCTGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKVPCVV*GVAGVK
Trigger: CTTCACGCCAGCCACGCCCCAGACCACACAAGGCAC...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGAGTAGCCGTTGCACTTaGCATTGCCAAAATGATCAC +
Preference number: 4 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLSSRCT*HCQNDH
Trigger: GTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGAGTAGCCGTTGCACTTaGCATTGCCAAAATGATCAC +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLSSRCT*HCQNDH
Trigger: GTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ACCTGTTTCCGGTTAGCCATACATCTGCTTGAACTGAAAGCATTCGTTGCAGTAAGCCCACTGTTGCAGTaGCAGCTGAGGGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TCFRLAIHLLELKAFVAVSPLLQ*QLRGSE
Trigger: CTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCT...TACTGCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCTAACCGGAAACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGGGAGGGGAGGTGGAATaGCTCTGGCTTCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKGGEVE*LWLLQP
Trigger: GGGTTGGAGAAGCCAGAGCCATTCCACCTCCCCTCC...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCCCAATTTACTCCCTGTaGTCAGGAACTTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRPIYSL*SGTCPQ
Trigger: CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGG...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGCATACTCATGGTTACTaGCTTTTGCTGTCCCAATAC +
Preference number: 4 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSHTHGY*LLLSQY
Trigger: GTATTGGGACAGCAAAAGCCAGTAACCATGAGTATG...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGATTTCCTCATACTCATaGTTACTGGCTTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGEISSYS*LLAFAV
Trigger: GACAGCAAAAGCCAGTAACCATGAGTATGAGGAAAT...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp TATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAACAAAGTCCCAAGTCCTaGTCAAGGCAGGAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: YTLDAIPSFLGRQAKVYQQSPKS*SRQERA
Trigger: GGCGCGCTCCTGCCTTGACCAGGACTTGGGACTTTG...TTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612899.5
CDS-3UTR TCA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTCTCAAATACAAAGCCTaGGGAAGGACTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCLKYKA*GRTCSA
Trigger: GGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGAG...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGCTTCTCGACACCAGTTaGGTTTCTTCTGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: EEEPWAESDIIPCQLQALLLDTS*VSSGFP
Trigger: TGGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAG...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTCTTCTCGACACCAGTTaGGTTTCTTCTGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCLLDTS*VSSGFP
Trigger: TGGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAG...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGCAAGCAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTAGAGAAGTGGCATGCATaGGGCAATTGCCGTCACCGT +
Preference number: 4 (lower is better)
Translates to: CKQCIHKLMPQQQPENRLEKWHA*GNCRHR
Trigger: ACGGTGACGGCAATTGCCTCATGCATGCCACTTCTC...TAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGAGCCGCGAGGGATCTaGCTTGGAACGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKEPRGI*LGTLVT
Trigger: TGTCACCAGCGTTCCAAGTCAGATCCCTCGCGGCTC...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAGGGACTGACTTTCCCTaGGGCAGCAGCAAAATGTTT +
Preference number: 4 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPGTDFP*GSSKMF
Trigger: AAACATTTTGCTGCTGCCTCAGGGAAAGTCAGTCCC...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AACAGAAAGAGATTTCCTCATACTCATGGTTACTGGCTTTTGCTGTCCCAATACTGGACGCTGTGGGACTaGCTTTCCCTGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NRKRFPHTHGYWLLLSQYWTLWD*LSLRQQ
Trigger: CTGCTGCCTCAGGGAAAGTCAGTCCCACAGCGTCCA...GTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR TCA 90 bp CGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGACGATGAAGCAGTCCTaGTGCGCAGGGTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RNIDEYVCIPWMQFLLSWTMKQS*CAGCRG
Trigger: GCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGT...CCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GGGCAGGCCAGTGGAGAGGCAAGTAAATTCCACCCACTTTCAAAGGGGCGAAATACTACAAACACTCTCTaGATACGTCCATTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: GQASGEASKFHPLSKGRNTTNTL*IRPFSL
Trigger: CAGGGAAAATGGACGTATTCAGAGAGTGTTTGTAGT...ATTTCGCCCCTTTGAAAGTGGGTGGAATTTACTTGCCTCTCCACTGGCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR TCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGAGCACGAAACATCGATaGATATGTATGTATACCTTG +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGESTKHR*ICMYTL
Trigger: CAAGGTATACATACATATTCATCGATGTTTCGTGCT...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATTTTCTCTGTACTCGATaGAACAGTGTGCAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHFLCTR*NSVQKP
Trigger: GGGCTTTTGCACACTGTTTCATCGAGTACAGAGAAA...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620204.3
CDS-3UTR GCA 90 bp CCCACGCGACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCCAGCTTTCCGCATATTaGTCAAATACAAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PTRLVCLFPFSAKTMKQSQLSAY*SNTKPE
Trigger: CTCAGGCTTTGTATTTGAGCAATATGCGGAAAGCTG...GGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGTCGCGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGAGCTTCATCCAACTTTaGGGCATTGATGAGATGAGT +
Preference number: 4 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLSFIQL*GIDEMS
Trigger: ACTCATCTCATCAATGCCGCAAAGTTGGATGAAGCT...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CCCACGCGACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCAGCTTCATCCAACTTTaGGGCATTGATGAGATGAGT +
Preference number: 4 (lower is better)
Translates to: PTRLVCLFPFSAKTMKQSSFIQL*GIDEMS
Trigger: ACTCATCTCATCAATGCCGCAAAGTTGGATGAAGCT...GGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGTCGCGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATTATTAGGCAGCCGGGGCTCCTaGACTTCATGGCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: QCIHKLMPQQQPENRLLLGSRGS*TSWQWS
Trigger: AGACCACTGCCATGAAGTGCAGGAGCCCCGGCTGCC...TAATAATAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CATGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGATCACAAAATCCGTTGTaGTGCACATTCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: HGYWLLLSQYQGTMGCRGSQNPL*CTFSVK
Trigger: CTTCACACTGAATGTGCAGCACAACGGATTTTGTGA...TCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR GCA 90 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTGCTCTGTGGCAAGAATaGGGGGAGGGGCTCCGGACG +
Preference number: 4 (lower is better)
Translates to: EARNIDEYVCIPWMQFLLALWQE*GEGLRT
Trigger: CGTCCGGAGCCCCTCCCCGCATTCTTGCCACAGAGC...AAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGTCCCCAGGAGTCCGTaGAGCTTGAGACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RNIDEYVCIPWMQFLLSWVPRSP*SLRQAA
Trigger: GGCTGCCTGTCTCAAGCTGCACGGACTCCTGGGGAC...CCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCATCCTTCAAACATGGTaGTTCCAAGGGTGCCGCATT +
Preference number: 4 (lower is better)
Translates to: KCIKEANLLPVVRNLPTAILQTW*FQGCRI
Trigger: AATGCGGCACCCTTGGAAGCACCATGTTTGAAGGAT...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCAAGCTGGTTGAGTTTATaGAAGCAGTGTATACACAAG +
Preference number: 4 (lower is better)
Translates to: SAFLPGPQERNRAGREKPSWLSL*KQCIHK
Trigger: CTTGTGTATACACTGCTTGCATAAACTCAACCAGCT...TGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCACCATGGTCCCAGCCTTaGACGGGGATTTCTATCACC +
Preference number: 4 (lower is better)
Translates to: VYLGCNSFFPGEASKSVSPWSQP*TGISIT
Trigger: GGTGATAGAAATCCCCGTCCAAGGCTGGGACCATGG...TGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGCACGGAAGGTTCCATaGGATTCTGGGCGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKARKVP*DSGRAP
Trigger: AGGGGCACGCCCAGAATCCCATGGAACCTTCCGTGC...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGAGTTGCCGGGCGTTGTaGCAACGTTCACAAAATCCG +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQSCRAL*QRSQNP
Trigger: CGGATTTTGTGAACGTTGCCACAACGCCCGGCAACT...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAATCCCCAGGCACGGAATaGTGTTCTGGAACCTGGACG +
Preference number: 4 (lower is better)
Translates to: YTLDAIPSFLGRQAKVYQSPGTE*CSGTWT
Trigger: CGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGA...TTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGTCAATGAAACACTTCTaGCAGTATCCTTCAAACATG +
Preference number: 4 (lower is better)
Translates to: LSKATWEHSRVTKPEHRGSMKHF*QYPSNM
Trigger: CATGTTTGAAGGATACTGCCAGAAGTGTTTCATTGA...CCCACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGGGCCCATCCTCTGGTTaGGATGCTGACACTCCATGC +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKGPSSG*DADTPC
Trigger: GCATGGAGTGTCAGCATCCCAACCAGAGGATGGGCC...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GGAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTAGTAGCCGTTGCACTTaGCATTGCCAAAATGATCAC +
Preference number: 4 (lower is better)
Translates to: GEEEPWAESDIIPCQLQASSRCT*HCQNDH
Trigger: GTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT...AGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAAGCAATTCCTTCTTTCCTaGGGAGGCAAGCAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: LRITVHGWFCISAGSSGKQFLLS*GGKQKC
Trigger: ACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTG...CTTTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAAAATACCAGGGTACCATaGGATGCAGGGGACTTCCCA +
Preference number: 4 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQNTRVP*DAGDFP
Trigger: TGGGAAGTCCCCTGCATCCCATGGTACCCTGGTATT...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGCCAACAAAGAATAGGTaGCTTTCTATTAGGGACAAT +
Preference number: 4 (lower is better)
Translates to: PAHLPSPKKFLASCLVGEPTKNR*LSIRDN
Trigger: ATTGTCCCTAATAGAAAGCCACCTATTCTTTGTTGG...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR TCA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCACAAATTCCTGAGATTTaGGAGACTCCAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPQIPEI*ETPVAS
Trigger: GCTGGCAACTGGAGTCTCTCAAATCTCAGGAATTTG...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGCAAGCAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATCCAGTGAGTTGTACTaGAGTCCACTTCGGGCCATG +
Preference number: 4 (lower is better)
Translates to: CKQCIHKLMPQQQPENRLSSELY*SPLRAM
Trigger: CATGGCCCGAAGTGGACTTCAGTACAACTCACTGGA...TAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTGCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTGCGGCATTGATGAGATaGGTTGTGCCATGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: IPSFLGRQAKVYQRGQFTAALMR*VVPWSQ
Trigger: CTGGGACCATGGCACAACTCATCTCATCAATGCCGC...AGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAATGGCAGTGGTCTCACTaGACAGAAAAGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: YTLDAIPSFLGRQAKVYQWQWSH*TEKGWV
Trigger: CACCCAGCCCTTTTCTGTTCAGTGAGACCACTGCCA...TTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGGACTGACTTTCCCTaGGGCAGCAGCAAAATGTTT +
Preference number: 4 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCGTDFP*GSSKMF
Trigger: AAACATTTTGCTGCTGCCTCAGGGAAAGTCAGTCCC...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGATTCTGAGCTTCAATaGAACACTTCTGGCAGTATC +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQDSELQ*NTSGSI
Trigger: GATACTGCCAGAAGTGTTTCATTGAAGCTCAGAATC...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGCCATACATCTGCTTaGACTGAAAGCATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRSHTSA*TESIRC
Trigger: GCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCT...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATCAGCTTTCCGCATATTaGTCAAATACAAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHQLSAY*SNTKPE
Trigger: CTCAGGCTTTGTATTTGAGCAATATGCGGAAAGCTG...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTATGGGATTCTGGGCGTaGCCCTCTCTCCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLMGFWA*PSLLPC
Trigger: GCAGGGGAGGAGAGAGGGGCACGCCCAGAATCCCAT...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGCAAGCAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTAGCTGGAGGAGGCCTCTaGTGTAGTCCTTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: CKQCIHKLMPQQQPENRLAGGGL*CSPFEA
Trigger: TGCTTCAAAAGGACTACAGCAGAGGCCTCCTCCAGC...TAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTGCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATTATTACGGCTTTTCTGCACTTaGTCGTCCCCGTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QCIHKLMPQQQPENRLLLRLFCT*SSPSCP
Trigger: GGGACAGGACGGGGACGAGCAAGTGCAGAAAAGCCG...TAATAATAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTTGGTGCTTCCAAGGGTaGCGCATTCCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLWCFQG*RIPSPG
Trigger: GCCTGGGGAGGGAATGCGGCACCCTTGGAAGCACCA...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTTGGCTCGATCTCAGTTaGTCTTCTGTCCTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCWLDLS*SSVLLA
Trigger: GGCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCA...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CTGGCTCGATCTCAGTTGCTCTTCTGTCCTTTTGGCCTCATGAAATCTCTGATTTGGCTCGATCTCAGTTaGTCTTCTGTCCTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: LARSQLLFCPFGLMKSLIWLDLS*SSVLLA
Trigger: GGCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCA...AATCAGAGATTTCATGAGGCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAACTGAAAGCATTCGTTaGAGTAGCCGTTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPTESIR*SSRCTW
Trigger: CCAAGTGCAACGGCTACTGCAACGAATGCTTTCAGT...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CTGGCTCGATCTCAGTTGCTCTTCTGTCCTTTTGGCCTCATGAAATCTCTGATTGCCAGTTACAAGCTTTaGTTTCTAAGGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: LARSQLLFCPFGLMKSLIASYKL*FLRPPG
Trigger: CCCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGC...AATCAGAGATTTCATGAGGCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATGTATACACAAGCTCATaGCCCAACAACAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHVYTSS*PNNNQK
Trigger: TTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATAC...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGTATACACAAGCTCATaGCCCAACAACAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQVYTSS*PNNNQK
Trigger: TTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATAC...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCGTCTCTGTTAACAAGTaGAACAGCTCGGATTTCAGG +
Preference number: 4 (lower is better)
Translates to: KCIKEANLLPVVRNLPTAVSVNK*NSSDFR
Trigger: CCTGAAATCCGAGCTGTTCCACTTGTTAACAGAGAC...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAACCTCAGGGCCCGGCTTaGAGTTCAGCTTTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKPQGPA*SSALGV
Trigger: AACTCCCAAAGCTGAACTCCAAGCCGGGCCCTGAGG...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTGTCCTGGTAACATCCTaGAGGCAGGCTTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: IPSFLGRQAKVYQRGQFTVLVTS*RQAWHF
Trigger: GAAGTGCCAAGCCTGCCTCCAGGATGTTACCAGGAC...AGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGTAGCCGTTGCACTTaGCATTGCCAAAATGATCAC +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRSSRCT*HCQNDH
Trigger: GTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAAGCCCACTGTTGCAGTaGCAGCTGAGGGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKSPLLQ*QLRGSE
Trigger: CTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCT...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACGGCTGTGTAGAGTTATaGATCACAAATATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: KFLASCLVGEEEPWAESDGCVEL*ITNIFR
Trigger: CCTGAAAATATTTGTGATCCATAACTCTACACAGCC...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTGGGTGTGATCTCTCTTaGCGGCCGCTCTCACCGCTC +
Preference number: 4 (lower is better)
Translates to: EARNIDEYVCIPWMQFLLGCDLS*RPLSPL
Trigger: GAGCGGTGAGAGCGGCCGCCAAGAGAGATCACACCC...AAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612899.5
CDS-3UTR TCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTCTCAAATACAAAGCCTaGGGAAGGACTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCLKYKA*GRTCSA
Trigger: GGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGAG...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAAGGTTTCAACAAATTCCTaGGATTTGAGAGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: LRITVHGWFCISAGSSGKVSTNS*DLRDSS
Trigger: ACTGGAGTCTCTCAAATCTCAGGAATTTGTTGAAAC...CTTTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCGTGTATTTCTTCCAGTaGGTTGTACTGAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRVYFFQ*VVLKST
Trigger: AGTGGACTTCAGTACAACTCACTGGAAGAAATACAC...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTTTTGGGAGTTTGTTTTaGTTCTTTTGCCGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCFGSLF*FFCRLS
Trigger: AGAGAGGCGGCAAAAGAATCAAAACAAACTCCCAAA...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGTACGTCCATTTTCCCTaGGCTTCCTTGAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GKQKCIKEANLLPVVRNLYVHFP*ASLSFL
Trigger: CAAGAAGCTCAAGGAAGCTCAGGGAAAATGGACGTA...CAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCACTTGTTCAGCCATTGTaGTCTCCAACACCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: SMNMYVYLGCNSFFPGEALVQPL*SPTPLR
Trigger: CCGGAGAGGTGTTGGAGAGCACAATGGCTGAACAAG...TGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR GCA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGCTTCATCCAACTTTaGGGCATTGATGAGATGAGT +
Preference number: 4 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRSFIQL*GIDEMS
Trigger: ACTCATCTCATCAATGCCGCAAAGTTGGATGAAGCT...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTCAAAATCCGTTGTGCTaGACATTCAGTGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCQNPLC*TFSVKG
Trigger: CCCCTTCACACTGAATGTGCAGCACAACGGATTTTG...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCATTCGAGGCACATCTCTaGGCTGGCTCGATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SMNMYVYLGCNSFFPGEAFEAHL*AGSISV
Trigger: AACTGAGATCGAGCCAGCGCAGAGATGTGCCTCGAA...TGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTACTGAAAGCATTCGTTaGAGTAGCCGTTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCTESIR*SSRCTW
Trigger: CCAAGTGCAACGGCTACTGCAACGAATGCTTTCAGT...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGGTCCATGGATGGTTCTaGATTTCTGCCGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKVHGWF*ISAGSS
Trigger: TGAGGACCCGGCAGAAATGCAGAACCATCCATGGAC...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAAGCTGGTTGAGTTTATaGAAGCAGTGTATACACAAG +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQSWLSL*KQCIHK
Trigger: CTTGTGTATACACTGCTTGCATAAACTCAACCAGCT...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCACTGTGGTCAGGAACTTaGCCACAGCCTGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: SMNMYVYLGCNSFFPGEALWSGT*PQPDSK
Trigger: CTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAG...TGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGCTTGGAGTTCAGCTTTaGGAGTTTGTTTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLLGVQL*EFVLIL
Trigger: AAGAATCAAAACAAACTCCCAAAGCTGAACTCCAAG...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATAGTTGCCGGGCGTTGTaGCAACGTTCACAAAATCCG +
Preference number: 4 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHSCRAL*QRSQNP
Trigger: CGGATTTTGTGAACGTTGCCACAACGCCCGGCAACT...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AACAGAAAGAGATTTCCTCATACTCATGGTTACTGGCTTTTGCTGTCCCAATACGCGAGGGATCTGACTTaGAACGCTGGTGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: NRKRFPHTHGYWLLLSQYARDLT*NAGDRK
Trigger: CTTCCTGTCACCAGCGTTCCAAGTCAGATCCCTCGC...GTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp CCCACGCGACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTCAATGAAACACTTCTaGCAGTATCCTTCAAACATG +
Preference number: 4 (lower is better)
Translates to: PTRLVCLFPFSAKTMKQSSMKHF*QYPSNM
Trigger: CATGTTTGAAGGATACTGCCAGAAGTGTTTCATTGA...GGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGTCGCGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATTATTAAGCCCACTGTTGCAGTaGCAGCTGAGGGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: QCIHKLMPQQQPENRLLLSPLLQ*QLRGSE
Trigger: CTCTGAACCCCTCAGCTGCCACTGCAACAGTGGGCT...TAATAATAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAACTTTCTAAGGCCACCTaGGAACACTCCCGGGTTACC +
Preference number: 4 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKLSKAT*EHSRVT
Trigger: GGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAGGAGAGGAGGAACCTTaGGCTGAATCTGACATCATC +
Preference number: 4 (lower is better)
Translates to: VYLGCNSFFPGEASKSVSGEEEP*AESDII
Trigger: GATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC...TGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ACGGGGATTTCTATCACCATTAAGTACTCTTTTAAGAGCTTCTCCTTCATCTCAGAGGTGGAATGGCTCTaGCTTCTCCAACCCACGCGA +
Preference number: 4 (lower is better)
Translates to: TGISITIKYSFKSFSFISEVEWL*LLQPTR
Trigger: TCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTC...TGAGATGAAGGAGAAGCTCTTAAAAGAGTACTTAATGGTGATAGAAATCCCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CCA 90 bp CAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATTATTAGAGGTGGAATGGCTCTaGCTTCTCCAACCCACGCGA +
Preference number: 4 (lower is better)
Translates to: QCIHKLMPQQQPENRLLLEVEWL*LLQPTR
Trigger: TCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTC...TAATAATAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTCATACTCATGGTTACTaGCTTTTGCTGTCCCAATAC +
Preference number: 4 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLHTHGY*LLLSQY
Trigger: GTATTGGGACAGCAAAAGCCAGTAACCATGAGTATG...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
3UTR CAA 72 bp AGAAAGAGATTTCCTCATACTCATGGTTACTGGCTTTaGCTGTCCCAATACCAGGGTACCATGGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: RKRFPHTHGYWL*LSQYQGTMGCR
Trigger: CCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
3UTR CAA 72 bp AAAGGCTGGGTGTTCACAGACATGAAGAAGGGGCAGTaGGGCGTTTCACATTTTACATCCATGAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: KGWVFTDMKKGQ*GVSHFTSMRES
Trigger: GCTTTCTCTCATGGATGTAAAATGTGAAACGCCCAACTGCCCCTTCTTCATGTCTGTGAACACCCAGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR TCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGATGATCTCCCGAAACTaGGGACAAAACTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQMISRN*GQNWQV
Trigger: AACTTGCCAGTTTTGTCCTCAGTTTCGGGAGATCAT...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTGGGTGTTCACAGACATaGAGAAGGGGCAGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLGCSQT*RRGSWA
Trigger: CGCCCAACTGCCCCTTCTTCATGTCTGTGAACACCC...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAAAGCCATACATCTGCTTaGACTGAAAGCATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQSHTSA*TESIRC
Trigger: GCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCT...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGAGCCATACATCTGCTTaGACTGAAAGCATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: GKQKCIKEANLLPVVRNLSHTSA*TESIRC
Trigger: GCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCT...CAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGTGTTGCAGTGGCAGCTaGGGGGTTCAGAGGATAGCA +
Preference number: 4 (lower is better)
Translates to: RNIDEYVCIPWMQFLLSWCCSGS*GVQRIA
Trigger: TGCTATCCTCTGAACCCCTCAGCTGCCACTGCAACA...CCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATTATTATCTCAGCCAAGACGATaGAGCAGTCCTGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: QCIHKLMPQQQPENRLLLSQPRR*SSPDAQ
Trigger: CTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGA...TAATAATAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATAGCACGAAACATCGATaGATATGTATGTATACCTTG +
Preference number: 4 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHSTKHR*ICMYTL
Trigger: CAAGGTATACATACATATTCATCGATGTTTCGTGCT...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTCTTGTTCAGCCATTGTaGTCTCCAACACCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPLVQPL*SPTPLR
Trigger: CCGGAGAGGTGTTGGAGAGCACAATGGCTGAACAAG...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR GCA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCATCACAAAATCCGTTGTaGTGCACATTCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPSQNPL*CTFSVK
Trigger: CTTCACACTGAATGTGCAGCACAACGGATTTTGTGA...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AACAGAAAGAGATTTCCTCATACTCATGGTTACTGGCTTTTGCTGTCCCAATACTTTCCCTGTGACCATTaGCAGTCTCATCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NRKRFPHTHGYWLLLSQYFPCDH*QSHPCS
Trigger: GGAGCAGGGATGAGACTGGCAATGGTCACAGGGAAA...GTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR GCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGATGGTTACTGGCTTTTaGTGTCCCAATACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQMVTGF*CPNTRV
Trigger: TACCCTGGTATTGGGACAGCAAAAGCCAGTAACCAT...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp AGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAATCAATGAAACACTTCTaGCAGTATCCTTCAAACATG +
Preference number: 4 (lower is better)
Translates to: RPIYSLWSGTCPQPDSKQSMKHF*QYPSNM
Trigger: CATGTTTGAAGGATACTGCCAGAAGTGTTTCATTGA...TTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGATCACAGTCCATGGATaGTTCTGCATTTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKITVHG*FCISAG
Trigger: CCCGGCAGAAATGCAGAACCATCCATGGACTGTGAT...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAACCAATTTACTCCCTGTaGTCAGGAACTTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: YTLDAIPSFLGRQAKVYQPIYSL*SGTCPQ
Trigger: CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGG...TTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAACAATTCCTTCTTTCCTaGGGAGGCAAGCAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQQFLLS*GGKQKC
Trigger: ACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTG...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AGCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGATATGTATGTATACCTTaGATGCAATTCCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SLRITVHGWFCISAGSSGYVCIP*MQFLLS
Trigger: GGAAAGAAGGAATTGCATCCAAGGTATACATACATA...TCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTAATACCAGGGTACCATaGGATGCAGGGGACTTCCCA +
Preference number: 4 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPNTRVP*DAGDFP
Trigger: TGGGAAGTCCCCTGCATCCCATGGTACCCTGGTATT...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR TCA 90 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTACGCCCCACATGTACTaGGAAGTGGCATGCATGAGG +
Preference number: 4 (lower is better)
Translates to: EARNIDEYVCIPWMQFLLTPHMY*EVACMR
Trigger: CCTCATGCATGCCACTTCTCAGTACATGTGGGGCGT...AAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATCAAATTCCTGAGATTTaGGAGACTCCAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHQIPEI*ETPVAS
Trigger: GCTGGCAACTGGAGTCTCTCAAATCTCAGGAATTTG...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAAGTGTATTTCTTCCAGTaGGTTGTACTGAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQVYFFQ*VVLKST
Trigger: AGTGGACTTCAGTACAACTCACTGGAAGAAATACAC...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGGGACTGACTTTCCCTaGGGCAGCAGCAAAATGTTT +
Preference number: 4 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKGTDFP*GSSKMF
Trigger: AAACATTTTGCTGCTGCCTCAGGGAAAGTCAGTCCC...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCTCAGCCAAGACGATaGAGCAGTCCTGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: EARNIDEYVCIPWMQFLLSQPRR*SSPDAQ
Trigger: CTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGA...AAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAACTACAAACACTCTCTaGATACGTCCATTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: QKCIKEANLLPVVRNLPTTTNTL*IRPFSL
Trigger: CAGGGAAAATGGACGTATTCAGAGAGTGTTTGTAGT...TGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCTTGAGAGACTCCAGTTaGCAGCGGAATTTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSLRDSS*QRNLKL
Trigger: CAACTTTAAATTCCGCTGGCAACTGGAGTCTCTCAA...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGAGCTTCATCCAACTTTaGGGCATTGATGAGATGAGT +
Preference number: 4 (lower is better)
Translates to: GKQKCIKEANLLPVVRNLSFIQL*GIDEMS
Trigger: ACTCATCTCATCAATGCCGCAAAGTTGGATGAAGCT...CAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAATCCGTTGTGCTaGACATTCAGTGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKQNPLC*TFSVKG
Trigger: CCCCTTCACACTGAATGTGCAGCACAACGGATTTTG...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCTCACAAAATCCGTTGTaGTGCACATTCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSSQNPL*CTFSVK
Trigger: CTTCACACTGAATGTGCAGCACAACGGATTTTGTGA...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTATCCTTCAAACATGGTaGTTCCAAGGGTGCCGCATT +
Preference number: 4 (lower is better)
Translates to: IPSFLGRQAKVYQRGQFTILQTW*FQGCRI
Trigger: AATGCGGCACCCTTGGAAGCACCATGTTTGAAGGAT...AGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGTTCGAGGCACATCTCTaGGCTGGCTCGATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: RNIDEYVCIPWMQFLLSWFEAHL*AGSISV
Trigger: AACTGAGATCGAGCCAGCGCAGAGATGTGCCTCGAA...CCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATCGTTGCAGTAGCCGTTaGACTTGGCATTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHRCSSR*TWHCQN
Trigger: ATTTTGGCAATGCCAAGTGCAACGGCTACTGCAACG...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGTTATCTTTCCTCTCCTaGTCAGACACCCTTAAGCCC +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKLSFLS*SDTLKP
Trigger: GGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATAA...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGTCTGACATCATCCCTTaGCAGTTACAAGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQSDIIP*QLQALL
Trigger: AAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGA...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATTATTAAAGTTCCTGGCCTCCTaGTTGGTAGGAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: QCIHKLMPQQQPENRLLLKFLAS*LVGEEE
Trigger: TTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT...TAATAATAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGGTATACACAAGCTCATaGCCCAACAACAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQVYTSS*PNNNQK
Trigger: TTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATAC...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AACAGAAAGAGATTTCCTCATACTCATGGTTACTGGCTTTTGCTGTCCCAATACGGAGAGGAGGAACCTTaGGCTGAATCTGACATCATC +
Preference number: 4 (lower is better)
Translates to: NRKRFPHTHGYWLLLSQYGEEEP*AESDII
Trigger: GATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC...GTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp AACAGAAAGAGATTTCCTCATACTCATGGTTACTGGCTTTTGCTGTCCCAATACATCACAGTCCATGGATaGTTCTGCATTTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: NRKRFPHTHGYWLLLSQYITVHG*FCISAG
Trigger: CCCGGCAGAAATGCAGAACCATCCATGGACTGTGAT...GTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp TATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTGGCTGTGTAGAGTTATaGATCACAAATATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: YQRGQFTPCGQELAHSLTGCVEL*ITNIFR
Trigger: CCTGAAAATATTTGTGATCCATAACTCTACACAGCC...AGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CCA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCCATGGGTGTGTCTGTaGAAGCCATTTGATAAGATT +
Preference number: 4 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSPWVCL*KPFDKI
Trigger: AATCTTATCAAATGGCTTCCACAGACACACCCATGG...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR TCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGATGATCTCCCGAAACTaGGGACAAAACTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKMISRN*GQNWQV
Trigger: AACTTGCCAGTTTTGTCCTCAGTTTCGGGAGATCAT...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGTTTCAACAAATTCCTaGGATTTGAGAGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: QKCIKEANLLPVVRNLPTVSTNS*DLRDSS
Trigger: ACTGGAGTCTCTCAAATCTCAGGAATTTGTTGAAAC...TGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTTCCAGTGAGTTGTACTaGAGTCCACTTCGGGCCATG +
Preference number: 4 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLSSELY*SPLRAM
Trigger: CATGGCCCGAAGTGGACTTCAGTACAACTCACTGGA...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCAGTGAGTTGTACTaGAGTCCACTTCGGGCCATG +
Preference number: 4 (lower is better)
Translates to: EARNIDEYVCIPWMQFLLSSELY*SPLRAM
Trigger: CATGGCCCGAAGTGGACTTCAGTACAACTCACTGGA...AAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTACAAACACTCTCTaGATACGTCCATTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AIPSFLGRQAKVYQRGQFTTNTL*IRPFSL
Trigger: CAGGGAAAATGGACGTATTCAGAGAGTGTTTGTAGT...AAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGGTTTTTCTGTCAATGTaGACATGTTCAGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GKQKCIKEANLLPVVRNLVFLSM*TCSVSA
Trigger: TGCTGAGACTGAACATGTTCACATTGACAGAAAAAC...CAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCGTTTTTCTGTCAATGTaGACATGTTCAGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSVFLSM*TCSVSA
Trigger: TGCTGAGACTGAACATGTTCACATTGACAGAAAAAC...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAATTATCTTTCCTCTCCTaGTCAGACACCCTTAAGCCC +
Preference number: 4 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKLSFLS*SDTLKP
Trigger: GGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATAA...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TGCAAGCAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATCTGACATCATCCCTTaGCAGTTACAAGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: CKQCIHKLMPQQQPENRLSDIIP*QLQALL
Trigger: AAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGA...TAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTGCTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTCTCGATGAAACAGTGTaGAAAAGCCCTTGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: AIPSFLGRQAKVYQRGQFLDETV*KSPCFL
Trigger: CAGAAAACAAGGGCTTTTGCACACTGTTTCATCGAG...AAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000620204.3
CDS-3UTR CCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTTCCATGAGAGAAAGCTaGGGCACGGAAGGTTCCATG +
Preference number: 4 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLSMRES*GTEGSM
Trigger: CATGGAACCTTCCGTGCCCCAGCTTTCTCTCATGGA...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTAGTTGCCGGGCGTTGTaGCAACGTTCACAAAATCCG +
Preference number: 4 (lower is better)
Translates to: EARNIDEYVCIPWMQFLLSCRAL*QRSQNP
Trigger: CGGATTTTGTGAACGTTGCCACAACGCCCGGCAACT...AAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTATGTATGTATACCTTaGATGCAATTCCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLYVCIP*MQFLLS
Trigger: GGAAAGAAGGAATTGCATCCAAGGTATACATACATA...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTAAAACTGGCAAGTTCTaGACATTTCCAGTGTGTATC +
Preference number: 4 (lower is better)
Translates to: AIPSFLGRQAKVYQRGQFKTGKF*TFPVCI
Trigger: GATACACACTGGAAATGTTCAGAACTTGCCAGTTTT...AAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTATGATCTCCCGAAACTaGGGACAAAACTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPMISRN*GQNWQV
Trigger: AACTTGCCAGTTTTGTCCTCAGTTTCGGGAGATCAT...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp CGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGCTTCTCGACACCAGTTaGGTTTCTTCTGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RNIDEYVCIPWMQFLLSWLLDTS*VSSGFP
Trigger: TGGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAG...CCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp TATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAGATTCTGAGCTTCAATaGAACACTTCTGGCAGTATC +
Preference number: 4 (lower is better)
Translates to: YTLDAIPSFLGRQAKVYQDSELQ*NTSGSI
Trigger: GATACTGCCAGAAGTGTTTCATTGAAGCTCAGAATC...TTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGTTGAGAGACTCCAGTTaGCAGCGGAATTTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKLRDSS*QRNLKL
Trigger: CAACTTTAAATTCCGCTGGCAACTGGAGTCTCTCAA...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp TATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAATTGAGAGACTCCAGTTaGCAGCGGAATTTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: YTLDAIPSFLGRQAKVYQLRDSS*QRNLKL
Trigger: CAACTTTAAATTCCGCTGGCAACTGGAGTCTCTCAA...TTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAATGCTCGCTGTTTTCCTaGCATTTCTTGTACTCATGC +
Preference number: 4 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKCSLFS*HFLYSC
Trigger: GCATGAGTACAAGAAATGGCAGGAAAACAGCGAGCA...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTTGCTCGCTGTTTTCCTaGCATTTCTTGTACTCATGC +
Preference number: 4 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPCSLFS*HFLYSC
Trigger: GCATGAGTACAAGAAATGGCAGGAAAACAGCGAGCA...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTGCCAGTTACAAGCTTTaGTTTCTAAGGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: EARNIDEYVCIPWMQFLLASYKL*FLRPPG
Trigger: CCCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGC...AAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCTTGGAGTTCAGCTTTaGGAGTTTGTTTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQLGVQL*EFVLIL
Trigger: AAGAATCAAAACAAACTCCCAAAGCTGAACTCCAAG...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGCTTTCTAAGGCCTATGTATGTATACCTTaGATGCAATTCCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: WAESDIIPCQLQALLSKAYVCIP*MQFLLS
Trigger: GGAAAGAAGGAATTGCATCCAAGGTATACATACATA...GGCCTTAGAAAGCAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGATTCTGAGCTTCAATaGAACACTTCTGGCAGTATC +
Preference number: 4 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKDSELQ*NTSGSI
Trigger: GATACTGCCAGAAGTGTTTCATTGAAGCTCAGAATC...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATGTTTTTCTGTCAATGTaGACATGTTCAGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHVFLSM*TCSVSA
Trigger: TGCTGAGACTGAACATGTTCACATTGACAGAAAAAC...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTAGCACGAAACATCGATaGATATGTATGTATACCTTG +
Preference number: 4 (lower is better)
Translates to: AIPSFLGRQAKVYQRGQFSTKHR*ICMYTL
Trigger: CAAGGTATACATACATATTCATCGATGTTTCGTGCT...AAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp ATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTTATGTATACCTTGGATaGAATTCCTTCTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: IPSFLGRQAKVYQRGQFTYVYLG*NSFFPG
Trigger: CCCAGGAAAGAAGGAATTGCATCCAAGGTATACATA...AGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp TCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAATTTCCTCATACTCATaGTTACTGGCTTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SMNMYVYLGCNSFFPGEAISSYS*LLAFAV
Trigger: GACAGCAAAAGCCAGTAACCATGAGTATGAGGAAAT...TGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR GCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTTGCTCGCTGTTTTCCTaGCATTTCTTGTACTCATGC +
Preference number: 4 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLCSLFS*HFLYSC
Trigger: GCATGAGTACAAGAAATGGCAGGAAAACAGCGAGCA...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTCATAGCCGAGAACAATaGGGTATCTGTAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLHSREQ*GICSIP
Trigger: AGGAATGCTACAGATACCCCATTGTTCTCGGCTATG...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTTCAATGAAACACTTCTaGCAGTATCCTTCAAACATG +
Preference number: 4 (lower is better)
Translates to: IPSFLGRQAKVYQRGQFTSMKHF*QYPSNM
Trigger: CATGTTTGAAGGATACTGCCAGAAGTGTTTCATTGA...AGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTCAATTCCTTCTTTCCTaGGGAGGCAAGCAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLQFLLS*GGKQKC
Trigger: ACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTG...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp ACCTGTTTCCGGTTAGCCATACATCTGCTTGAACTGAAAGCATTCGTTGCAGTATATGTATGTATACCTTaGATGCAATTCCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TCFRLAIHLLELKAFVAVYVCIP*MQFLLS
Trigger: GGAAAGAAGGAATTGCATCCAAGGTATACATACATA...TACTGCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCTAACCGGAAACAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR TCA 90 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTTTGGGAGTTTGTTTTaGTTCTTTTGCCGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: EARNIDEYVCIPWMQFLLFGSLF*FFCRLS
Trigger: AGAGAGGCGGCAAAAGAATCAAAACAAACTCCCAAA...AAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp GAAGCACGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTCAGCTTTCCGCATATTaGTCAAATACAAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: EARNIDEYVCIPWMQFLLQLSAY*SNTKPE
Trigger: CTCAGGCTTTGTATTTGAGCAATATGCGGAAAGCTG...AAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCGTGCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR GCA 90 bp CGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGTATGTATACCTTGGATaGAATTCCTTCTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RNIDEYVCIPWMQFLLSWYVYLG*NSFFPG
Trigger: CCCAGGAAAGAAGGAATTGCATCCAAGGTATACATA...CCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATTATTACTTGGAGTTCAGCTTTaGGAGTTTGTTTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: QCIHKLMPQQQPENRLLLLGVQL*EFVLIL
Trigger: AAGAATCAAAACAAACTCCCAAAGCTGAACTCCAAG...TAATAATAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CCA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTCCAACAAAGAATAGGTaGCTTTCTATTAGGGACAAT +
Preference number: 4 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLPTKNR*LSIRDN
Trigger: ATTGTCCCTAATAGAAAGCCACCTATTCTTTGTTGG...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS CCA 90 bp GGCGGCCGCTCTCACCGCTCCGCCCCCGCGGGCTCCAAGCTCGCTTaGCCCGCCACGAAGACTGCAGACTGCGCAGTCTGCTTTGCCCCG +
Preference number: 5 (lower is better)
Translates to: GGRSHRSAPAGSKLA*PATKTADCAVCFAP
Trigger: CGGGGCAAAGCAGACTGCGCAGTCTGCAGTCTTCGTGGCGGGCCAAGCGAGCTTGGAGCCCGCGGGGGCGGAGCGGTGAGAGCGGCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421450.1
CDS CCA 90 bp CTCCATGGACGCCTGGGGTCGGGCTCGCTCGCTGGCAGGGTCGGCTaGGGGTGTGATCTCTCTTGGCGGCCGCTCTCACCGCTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: LHGRLGSGSLAGRVG*GCDLSWRPLSPLRP
Trigger: GGGGCGGAGCGGTGAGAGCGGCCGCCAAGAGAGATCACACCCCCAGCCGACCCTGCCAGCGAGCGAGCCCGACCCCAGGCGTCCATGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421450.1
ENST00000612899.5
CDS GCA 90 bp CTCCGCCCCCGCGGGCTCCAAGCTCGCTTGGCCCGCCACGAAGACTaGAGACTGCGCAGTCTGCTTTGCCCCGTTTCAGTTGTATGCGGG +
Preference number: 5 (lower is better)
Translates to: LRPRGLQARLARHED*RLRSLLCPVSVVCG
Trigger: CCCGCATACAACTGAAACGGGGCAAAGCAGACTGCGCAGTCTGCAGTCTTCGTGGCGGGCCAAGCGAGCTTGGAGCCCGCGGGGGCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421450.1
CDS GCA 90 bp CCGGTGGGCCCCAGGGCCCATCCTCTGGTTGATGCTGACACTCCATaGAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PVGPRAHPLVDADTP*RAPRCGRPGCSCRR
Trigger: CCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCAACCAGAGGATGGGCCCTGGGGCCCACCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619035.4
CDS CCA 90 bp TCCTGGAGGCAGGCTTGGCACTTCCCGGGATCCAAGTGCCTTGTGTaGTCTGGGGCGTGGCTGGCGAAGTTGCCGGGCGTTGTGGCAACG +
Preference number: 5 (lower is better)
Translates to: SWRQAWHFPGSKCLV*SGAWLAKLPGVVAT
Trigger: CGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS-3UTR CAA 90 bp GGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTGCGGGCGCACTTGGGCCTaGAGGTGCTTTGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: GRPGCSCRRPGRTWALRCGRTWA*RCFVWF
Trigger: GAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCC...GCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp AGACAGGCAGCCAGCAGGGGCGTCGTTTCCAGCTCTGTGGCAAGAATGCGGGGACAGGCCAGGATGTTCTaGCAGGAGGCCCGGGCGCAC +
Preference number: 5 (lower is better)
Translates to: RQAASRGVVSSSVARMRGQARMF*QEARAH
Trigger: GTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTG...TCCCCGCATTCTTGCCACAGAGCTGGAAACGACGCCCCTGCTGGCTGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS GCA 90 bp GCCCATCCTCTGGTTGATGCTGACACTCCATGCAGAGCTCCTCGCTaGGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGG +
Preference number: 5 (lower is better)
Translates to: AHPLVDADTPCRAPR*GRPGCSCRRPGRTW
Trigger: CCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCAACCAGAGGATGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619035.4
CDS CCA 90 bp GAGGCAGGCTTGGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTaGGGCGTGGCTGGCGAAGTTGCCGGGCGTTGTGGCAACGTTCAC +
Preference number: 5 (lower is better)
Translates to: EAGLALPGIQVPCVV*GVAGEVAGRCGNVH
Trigger: GTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS-3UTR CAA 90 bp AGGGTGCAGGGGCCTCGGCCAGTCCCCGCACACCTTCCAAGTCCAAAGAAGTTCGAGGCCCGGGCGCACTaGGGCCTTGAGGTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: RVQGPRPVPAHLPSPKKFEARAH*GLEVLC
Trigger: ACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTC...GAACTTCTTTGGACTTGGAAGGTGTGCGGGGACTGGCCGAGGCCCCTGCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS GCA 90 bp CCCGCGGGCTCCAAGCTCGCTTGGCCCGCCACGAAGACTGCAGACTaGGCAGTCTGCTTTGCCCCGTTTCAGTTGTATGCGGGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: PAGSKLAWPATKTAD*AVCFAPFQLYAGCR
Trigger: CCTACAACCCGCATACAACTGAAACGGGGCAAAGCAGACTGCGCAGTCTGCAGTCTTCGTGGCGGGCCAAGCGAGCTTGGAGCCCGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421450.1
CDS GCA 90 bp CTGGTAACATCCTGGAGGCAGGCTTGGCACTTCCCGGGATCCAAGTaGCTTGTGTGGTCTGGGGCGTGGCTGGCGAAGTTGCCGGGCGTT +
Preference number: 5 (lower is better)
Translates to: LVTSWRQAWHFPGSK*LVWSGAWLAKLPGV
Trigger: AACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGATGTTACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS-3UTR CAA 90 bp GAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTCTGGCTCGATCTCAGTaGCTCTTCTGTCCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: ELLAAAGQDVLAGGPGALLARSQ*LFCPFG
Trigger: GCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCAG...AAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGCAGGCCAGGATGTTCTaGCAGGAGGCCCGGGCGCAC +
Preference number: 5 (lower is better)
Translates to: LSKATWEHSRVTKPEHRGQARMF*QEARAH
Trigger: GTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTG...CCCACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS CCA 90 bp GGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTaGCGAAGTTGCCGGGCGTTGTGGCAACGTTCACAAAATCCGTTG +
Preference number: 5 (lower is better)
Translates to: GTSRDPSALCGLGRG*RSCRALWQRSQNPL
Trigger: CAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS CCA 90 bp GCTTGGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTaGCTGGCGAAGTTGCCGGGCGTTGTGGCAACGTTCACAAAATCC +
Preference number: 5 (lower is better)
Translates to: AWHFPGSKCLVWSGA*LAKLPGVVATFTKS
Trigger: GGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS-3UTR CAA 90 bp CGGGCGCACTTGGGCCTTGAGGTGCTTTGTGTGGTTCGAGGCACATCTCTGCGCGCCATGGTCCCAGCCTaGGACGGGGATTTCTATCAC +
Preference number: 5 (lower is better)
Translates to: RAHLGLEVLCVVRGTSLRAMVPA*DGDFYH
Trigger: GTGATAGAAATCCCCGTCCAAGGCTGGGACCATGGC...GCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTATCCTGGAGGCAGGCTaGGCACTTCCCGGGATCCAA +
Preference number: 5 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPILEAG*ALPGIQ
Trigger: TTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGAT...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGCCCGGGCGCACTaGGGCCTTGAGGTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: PAHLPSPKKFLASCLVGEEARAH*GLEVLC
Trigger: ACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTC...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTCCCTTAAGCCCACTGTaGCAGTGGCAGCTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPPLSPL*QWQLRG
Trigger: ACCCCTCAGCTGCCACTGCAACAGTGGGCTTAAGGG...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATGGGCTCCAAGCTCGCTaGGCCCGCCACGAAGACTGC +
Preference number: 5 (lower is better)
Translates to: LHFCRVLRKGTGQVGKNHGLQAR*ARHEDC
Trigger: GCAGTCTTCGTGGCGGGCCAAGCGAGCTTGGAGCCC...ATGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612899.5
CDS GCA 90 bp CGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGAAGTTaGCGGGCGTTGTGGCAACGTTCACAAAATCCGTTGTGCTGCACA +
Preference number: 5 (lower is better)
Translates to: RDPSALCGLGRGWRS*RALWQRSQNPLCCT
Trigger: TGTGCAGCACAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS-3UTR CAA 90 bp GGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTGCACTTCTCGACACCAGTaGAGTTTCTTCTGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: GRPGCSCRRPGRTWALRCTSRHQ*SFFWLS
Trigger: GGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAGT...GCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GAGCTCCTCGCTGCGGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTCGTTCACAAAATCCGTaGTGCTGCACATTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: ELLAAAGQDVLAGGPGALRSQNP*CCTFSV
Trigger: CACACTGAATGTGCAGCACAACGGATTTTGTGAACG...AAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCCGCAGCGAGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACCGGGATCCAAGTGCCTaGTGTGGTCTGGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: KFLASCLVGEEEPWAESDRDPSA*CGLGRG
Trigger: GCCACGCCCCAGACCACACAAGGCACTTGGATCCCG...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGAGGAGTCCGTGCAGCTaGAGACAGGCAGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PAHLPSPKKFLASCLVGERSPCS*RQAASR
Trigger: CCTGCTGGCTGCCTGTCTCAAGCTGCACGGACTCCT...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGAGGAGTCCGTGCAGCTaGAGACAGGCAGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LSKATWEHSRVTKPEHRGRSPCS*RQAASR
Trigger: CCTGCTGGCTGCCTGTCTCAAGCTGCACGGACTCCT...CCCACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GGGGAGGTGGAATGGCTCTGGCTTCTCCAACCCACGCGACTTGTGTGTCTTTTCTCGAGGCCCCACTTCTaGCAGGAGGTGACCCACCTG +
Preference number: 5 (lower is better)
Translates to: GEVEWLWLLQPTRLVCLFSRPHF*QEVTHL
Trigger: CAGGTGGGTCACCTCCTGCAAGAAGTGGGGCCTCGA...GAAAAGACACACAAGTCGCGTGGGTTGGAGAAGCCAGAGCCATTCCACCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GGCAGGCCAGGATGTTCTTGCAGGAGGCCCGGGCGCACTTGGGCCTTGAGGTGCATGAAGAAGGGGCAGTaGGGCGTTTCACATTTTACA +
Preference number: 5 (lower is better)
Translates to: GRPGCSCRRPGRTWALRCMKKGQ*GVSHFT
Trigger: TGTAAAATGTGAAACGCCCAACTGCCCCTTCTTCAT...GCACCTCAAGGCCCAAGTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CATGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGAGTGGCTGGCGTGAAGTaGCCGGGCGTTGTGGCAACG +
Preference number: 5 (lower is better)
Translates to: HGYWLLLSQYQGTMGCRGVAGVK*PGVVAT
Trigger: CGTTGCCACAACGCCCGGCAACTTCACGCCAGCCAC...TCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CAA 90 bp CCCGCACACCTTCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGATCCTGGAGGCAGGCTaGGCACTTCCCGGGATCCAA +
Preference number: 5 (lower is better)
Translates to: PAHLPSPKKFLASCLVGEILEAG*ALPGIQ
Trigger: TTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGAT...CTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGAAGGTGTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATAGGAGTCCGTGCAGCTaGAGACAGGCAGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LHFCRVLRKGTGQVGKNHRSPCS*RQAASR
Trigger: CCTGCTGGCTGCCTGTCTCAAGCTGCACGGACTCCT...ATGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CATGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGAGAGGCCCGGGCGCACTaGGGCCTTGAGGTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: HGYWLLLSQYQGTMGCRGEARAH*GLEVLC
Trigger: ACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTC...TCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CAA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGTCGAGGCCCCACTTCTaGCAGGAGGTGACCCACCTG +
Preference number: 5 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSSRPHF*QEVTHL
Trigger: CAGGTGGGTCACCTCCTGCAAGAAGTGGGGCCTCGA...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGCCCTTAAGCCCACTGTaGCAGTGGCAGCTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: LSKATWEHSRVTKPEHRGPLSPL*QWQLRG
Trigger: ACCCCTCAGCTGCCACTGCAACAGTGGGCTTAAGGG...CCCACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS CCA 90 bp GCCTTGTGTGGTCTGGGGCGTGGCTGGCGAAGTTGCCGGGCGTTGTaGCAACGTTCACAAAATCCGTTGTGCTGCACATTCAGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: ALCGLGRGWRSCRAL*QRSQNPLCCTFSVK
Trigger: CTTCACACTGAATGTGCAGCACAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS-3UTR CAA 90 bp CCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCAGGGTGCAGGGGCCTAGCCTGAGGAAGGACTaGTTCAGCCATTGTGCTCTC +
Preference number: 5 (lower is better)
Translates to: PFLSQDDEAVLMRRVQGPSLRKD*FSHCAL
Trigger: GAGAGCACAATGGCTGAACAAGTCCTTCCTCAGGCT...AGGCCCCTGCACCCTGCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CCCACGCGACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCCCCTCAGGGCCCGGCTaGGAGTTCAGCTTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: PTRLVCLFPFSAKTMKQSPSGPG*EFSFGS
Trigger: ACTCCCAAAGCTGAACTCCAAGCCGGGCCCTGAGGG...GGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGTCGCGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGCCCTCAGGGCCCGGCTaGGAGTTCAGCTTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLPSGPG*EFSFGS
Trigger: ACTCCCAAAGCTGAACTCCAAGCCGGGCCCTGAGGG...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAAGCGGGATCCAAGTGCCTaGTGTGGTCTGGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: LRITVHGWFCISAGSSGKRDPSA*CGLGRG
Trigger: GCCACGCCCCAGACCACACAAGGCACTTGGATCCCG...CTTTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATCGGGATCCAAGTGCCTaGTGTGGTCTGGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHRDPSA*CGLGRG
Trigger: GCCACGCCCCAGACCACACAAGGCACTTGGATCCCG...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGAGGAGTCCGTGCAGCTaGAGACAGGCAGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLRSPCS*RQAASR
Trigger: CCTGCTGGCTGCCTGTCTCAAGCTGCACGGACTCCT...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TATCTTTCCTCTCCTGCTCAGACACCCTTAAGCCCACTGTTGCAGTGGCAGCTGCCGGCTTTTCTGCACTaGCTCGTCCCCGTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: YLSSPAQTPLSPLLQWQLPAFLH*LVPVLS
Trigger: GGACAGGACGGGGACGAGCAAGTGCAGAAAAGCCGG...CAGCTGCCACTGCAACAGTGGGCTTAAGGGTGTCTGAGCAGGAGAGGAAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCAGGGCGCACTTGGGCCTaGAGGTGCTTTGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: SAFLPGPQERNRAGREKPGRTWA*RCFVWF
Trigger: GAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCC...TGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGTCGAGGCCCCACTTCTaGCAGGAGGTGACCCACCTG +
Preference number: 5 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLSRPHF*QEVTHL
Trigger: CAGGTGGGTCACCTCCTGCAAGAAGTGGGGCCTCGA...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGGCTTCCTTGAGCTTCTaGCAGAGGGCCTCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSASLSF*QRASLP
Trigger: TGGCAGCGAGGCCCTCTGCAAGAAGCTCAAGGAAGC...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CGGGCGCACTTGGGCCTTGAGGTGCTTTGTGTGGTTCGAGGCACATCTCTGCGCACTTCTCGACACCAGTaGAGTTTCTTCTGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: RAHLGLEVLCVVRGTSLRTSRHQ*SFFWLS
Trigger: GGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAGT...GCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTGTGGCTGGCGTGAAGTaGCCGGGCGTTGTGGCAACG +
Preference number: 5 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLVAGVK*PGVVAT
Trigger: CGTTGCCACAACGCCCGGCAACTTCACGCCAGCCAC...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTGTGGCTGGCGTGAAGTaGCCGGGCGTTGTGGCAACG +
Preference number: 5 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCVAGVK*PGVVAT
Trigger: CGTTGCCACAACGCCCGGCAACTTCACGCCAGCCAC...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTCGGGATCCAAGTGCCTaGTGTGGTCTGGGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCRDPSA*CGLGRG
Trigger: GCCACGCCCCAGACCACACAAGGCACTTGGATCCCG...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGGGACTTGTTCAGCCATaGTGCTCTCCAACACCTCTC +
Preference number: 5 (lower is better)
Translates to: LSKATWEHSRVTKPEHRGGLVQP*CSPTPL
Trigger: GAGAGGTGTTGGAGAGCACAATGGCTGAACAAGTCC...CCCACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CAA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGCGTGTGTCTGTTTCCTaGAGCGTGCTGAACAGCGCC +
Preference number: 5 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLRVSVS*SVLNSA
Trigger: GGCGCTGTTCAGCACGCTCAAGGAAACAGACACACG...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTCCGGCTTTTCTGCACTaGCTCGTCCCCGTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLPAFLH*LVPVLS
Trigger: GGACAGGACGGGGACGAGCAAGTGCAGAAAAGCCGG...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CGGGCGCACTTGGGCCTTGAGGTGCTTTGTGTGGTTCGAGGCACATCTCTGCGCAGTGTGCAAAAGCCCTaGTTTTCTGGAGTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: RAHLGLEVLCVVRGTSLRSVQKP*FSGVPK
Trigger: TTTTGGGACTCCAGAAAACAAGGGCTTTTGCACACT...GCGCAGAGATGTGCCTCGAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCAGGCCAGGATGTTCTaGCAGGAGGCCCGGGCGCAC +
Preference number: 5 (lower is better)
Translates to: GKQKCIKEANLLPVVRNLQARMF*QEARAH
Trigger: GTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTG...CAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTCAGGCCAGGATGTTCTaGCAGGAGGCCCGGGCGCAC +
Preference number: 5 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCQARMF*QEARAH
Trigger: GTGCGCCCGGGCCTCCTGCAAGAACATCCTGGCCTG...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGAGGCCCTCCAACCCACGCGACTaGTGTGTCTTTTCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: WQLRGSEDSTMMTDSSRPSNPRD*CVFSLS
Trigger: AGAAAGGGAAAAGACACACAAGTCGCGTGGGTTGGA...GGGCCTCGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS CCA 90 bp AGCGCCACAAGCTTCCGGACTTCTCGACACCAGTTGAGTTTCTTCTaGCTTTCCAGGGTGGCCTGGATGTTTCTGTCGATGAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SATSFRTSRHQLSFF*LSRVAWMFLSMRAL
Trigger: CAAAGCCCTCATCGACAGAAACATCCAGGCCACCCTGGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAGTCCGGAAGCTTGTGGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000237289.8
ENST00000420009.5
ENST00000433680.1
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS-3UTR CAA 90 bp TCTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCAGCATGCATGAGGCAATaGCCGTCACCGTTCGTTTTC +
Preference number: 5 (lower is better)
Translates to: SAFLPGPQERNRAGREKPACMRQ*PSPFVF
Trigger: GAAAACGAACGGTGACGGCAATTGCCTCATGCATGC...TGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp AGGGTGCCGCATTCCCTCCCCAGGCACGGAATGGTGTTCTGGAACCTGGACGCTTTTGAGAGACTCCAGTaGCCAGCGGAATTTAAAGTT +
Preference number: 5 (lower is better)
Translates to: RVPHSLPRHGMVFWNLDAFERLQ*PAEFKV
Trigger: AACTTTAAATTCCGCTGGCAACTGGAGTCTCTCAAA...AGCGTCCAGGTTCCAGAACACCATTCCGTGCCTGGGGAGGGAATGCGGCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CAA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATGCCATGGTCCCAGCCTaGGACGGGGATTTCTATCAC +
Preference number: 5 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHAMVPA*DGDFYH
Trigger: GTGATAGAAATCCCCGTCCAAGGCTGGGACCATGGC...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTATCCTGGAGGCAGGCTaGGCACTTCCCGGGATCCAA +
Preference number: 5 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCILEAG*ALPGIQ
Trigger: TTGGATCCCGGGAAGTGCCAAGCCTGCCTCCAGGAT...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTGGGCGCACTTGGGCCTaGAGGTGCTTTGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: YQRGQFTPCGQELAHSLTGRTWA*RCFVWF
Trigger: GAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCC...AGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTCCCTTAAGCCCACTGTaGCAGTGGCAGCTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCPLSPL*QWQLRG
Trigger: ACCCCTCAGCTGCCACTGCAACAGTGGGCTTAAGGG...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGGCTTCCTTGAGCTTCTaGCAGAGGGCCTCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: EEEPWAESDIIPCQLQALASLSF*QRASLP
Trigger: TGGCAGCGAGGCCCTCTGCAAGAAGCTCAAGGAAGC...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GCCCATCCTCTGGTTGGGATGCTGACACTCCATGCAGAGCTCCTCGCTGCGGCAGTCTGTGGAAGCCATTaGATAAGATTGTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: AHPLVGMLTLHAELLAAAVCGSH*IRLSHS
Trigger: TGAATGGGACAATCTTATCAAATGGCTTCCACAGAC...TGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCCCAACCAGAGGATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS TCA 90 bp CGTTCGTTTTCAGCGCCACAAGCTTCCGGACTTCTCGACACCAGTTaGGTTTCTTCTGGCTTTCCAGGGTGGCCTGGATGTTTCTGTCGA +
Preference number: 5 (lower is better)
Translates to: RSFSAPQASGLLDTS*VSSGFPGWPGCFCR
Trigger: TCGACAGAAACATCCAGGCCACCCTGGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAGTCCGGAAGCTTGTGGCGCTGAAAACGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237289.8
ENST00000420009.5
ENST00000433680.1
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS-3UTR CAA 90 bp TCCAAGTCCAAAGAAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGCTGTCGATGAGGGCTTaGTGGATGATCTCCCGAAAC +
Preference number: 5 (lower is better)
Translates to: SKSKEVPGLLLGRRGGTLLSMRA*WMISRN
Trigger: GTTTCGGGAGATCATCCACAAAGCCCTCATCGACAG...CAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTTCTTTGGACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTGCGTGTGTCTGTTTCCTaGAGCGTGCTGAACAGCGCC +
Preference number: 5 (lower is better)
Translates to: EEEPWAESDIIPCQLQALRVSVS*SVLNSA
Trigger: GGCGCTGTTCAGCACGCTCAAGGAAACAGACACACG...CAAAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TGCAGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCTTCAAAGGGGCGAAATaGGAACCTGATTCCAAACTT +
Preference number: 5 (lower is better)
Translates to: CSSRCTWHCQNDHRRGPGFKGAK*EPDSKL
Trigger: AAGTTTGGAATCAGGTTCCAATTTCGCCCCTTTGAA...GCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTGCCATGGTCCCAGCCTaGGACGGGGATTTCTATCAC +
Preference number: 5 (lower is better)
Translates to: YQRGQFTPCGQELAHSLTAMVPA*DGDFYH
Trigger: GTGATAGAAATCCCCGTCCAAGGCTGGGACCATGGC...AGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCCCTCAGGGCCCGGCTaGGAGTTCAGCTTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSPSGPG*EFSFGS
Trigger: ACTCCCAAAGCTGAACTCCAAGCCGGGCCCTGAGGG...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTCCGGCTTTTCTGCACTaGCTCGTCCCCGTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCPAFLH*LVPVLS
Trigger: GGACAGGACGGGGACGAGCAAGTGCAGAAAAGCCGG...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCGGCTTTTCTGCACTaGCTCGTCCCCGTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: GKQKCIKEANLLPVVRNLPAFLH*LVPVLS
Trigger: GGACAGGACGGGGACGAGCAAGTGCAGAAAAGCCGG...CAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CATGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGACTGGCTCGATCTCAGTaGCTCTTCTGTCCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: HGYWLLLSQYQGTMGCRGLARSQ*LFCPFG
Trigger: GCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCAG...TCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CAA 90 bp CTGCATTTCTGCCGGGTCCTCAGGAAAGGAACCGGGCAGGTAGGGAAAAACCATTGCCAGTTACAAGCTTaGCTTTCTAAGGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: LHFCRVLRKGTGQVGKNHCQLQA*LSKATW
Trigger: CCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCA...ATGGTTTTTCCCTACCTGCCCGGTTCCTTTCCTGAGGACCCGGCAGAAATGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACTCCAACCCACGCGACTaGTGTGTCTTTTCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: KFLASCLVGEEEPWAESDSNPRD*CVFSLS
Trigger: AGAAAGGGAAAAGACACACAAGTCGCGTGGGTTGGA...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp AGTAGCCGTTGCACTTGGCATTGCCAAAATGATCACAGGCGGGGGCCCGGCAACTTTGAGAGACTCCAGTaGCCAGCGGAATTTAAAGTT +
Preference number: 5 (lower is better)
Translates to: SSRCTWHCQNDHRRGPGNFERLQ*PAEFKV
Trigger: AACTTTAAATTCCGCTGGCAACTGGAGTCTCTCAAA...GTTGCCGGGCCCCCGCCTGTGATCATTTTGGCAATGCCAAGTGCAACGGCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCACCCTCAGGGCCCGGCTaGGAGTTCAGCTTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: VYLGCNSFFPGEASKSVSPSGPG*EFSFGS
Trigger: ACTCCCAAAGCTGAACTCCAAGCCGGGCCCTGAGGG...TGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGGCGCACTTGGGCCTaGAGGTGCTTTGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCGRTWA*RCFVWF
Trigger: GAACCACACAAAGCACCTCAAGGCCCAAGTGCGCCC...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCCCTTAAGCCCACTGTaGCAGTGGCAGCTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSPLSPL*QWQLRG
Trigger: ACCCCTCAGCTGCCACTGCAACAGTGGGCTTAAGGG...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TGGTTACTGGCTTTTGCTGTCCCAATACCAGGGTACCATGGGATGCAGGGGACTTCCAACCCACGCGACTaGTGTGTCTTTTCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: WLLAFAVPIPGYHGMQGTSNPRD*CVFSLS
Trigger: AGAAAGGGAAAAGACACACAAGTCGCGTGGGTTGGA...AGTCCCCTGCATCCCATGGTACCCTGGTATTGGGACAGCAAAAGCCAGTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CAA 90 bp CAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCTTCCTTGAGCTTCTaGCAGAGGGCCTCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: QKCIKEANLLPVVRNLPTASLSF*QRASLP
Trigger: TGGCAGCGAGGCCCTCTGCAAGAAGCTCAAGGAAGC...TGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTAGCCTGAGGAAGGACTaGTTCAGCCATTGTGCTCTC +
Preference number: 5 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCSLRKD*FSHCAL
Trigger: GAGAGCACAATGGCTGAACAAGTCCTTCCTCAGGCT...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAAACTTCTCGACACCAGTaGAGTTTCTTCTGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: ASESQSMDGSAFLPGPQETSRHQ*SFFWLS
Trigger: GGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAGT...TTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTGCATGCATGAGGCAATaGCCGTCACCGTTCGTTTTC +
Preference number: 5 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLACMRQ*PSPFVF
Trigger: GAAAACGAACGGTGACGGCAATTGCCTCATGCATGC...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TGCTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGCCTTCTGAGGATGTaGCAAAGGACAAATATGTGT +
Preference number: 5 (lower is better)
Translates to: CFLRPPGNTPGLPNLSIVGLLRM*QRTNMC
Trigger: ACACATATTTGTCCTTTGCAACATCCTCAGAAGGCC...CACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACGGCCTTCTGAGGATGTaGCAAAGGACAAATATGTGT +
Preference number: 5 (lower is better)
Translates to: KFLASCLVGEEEPWAESDGLLRM*QRTNMC
Trigger: ACACATATTTGTCCTTTGCAACATCCTCAGAAGGCC...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGGGCCTTCTGAGGATGTaGCAAAGGACAAATATGTGT +
Preference number: 5 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSGLLRM*QRTNMC
Trigger: ACACATATTTGTCCTTTGCAACATCCTCAGAAGGCC...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAAGCCATGGTCCCAGCCTaGGACGGGGATTTCTATCAC +
Preference number: 5 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQAMVPA*DGDFYH
Trigger: GTGATAGAAATCCCCGTCCAAGGCTGGGACCATGGC...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TTGCAGTGGCAGCTGAGGGGTTCAGAGGATAGCACCATGATGACTGACAGCTCGTCTGCTGTAGTCCTTTaGAAGCAAGTACTGCAGATC +
Preference number: 5 (lower is better)
Translates to: LQWQLRGSEDSTMMTDSSSAVVL*KQVLQI
Trigger: GATCTGCAGTACTTGCTTCAAAAGGACTACAGCAGA...CGAGCTGTCAGTCATCATGGTGCTATCCTCTGAACCCCTCAGCTGCCACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TGCTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGTCTGCTGTAGTCCTTTaGAAGCAAGTACTGCAGATC +
Preference number: 5 (lower is better)
Translates to: CFLRPPGNTPGLPNLSIVSAVVL*KQVLQI
Trigger: GATCTGCAGTACTTGCTTCAAAAGGACTACAGCAGA...CACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CTTTCTAAGGCCACCTGGGAACACTCCCGGGTTACCAAACCTGAGCATCGTGGGGCAGCAGCAAAATGTTaGTTTTCTCTGTACTCGATG +
Preference number: 5 (lower is better)
Translates to: LSKATWEHSRVTKPEHRGAAAKC*FSLYSM
Trigger: CATCGAGTACAGAGAAAACAAACATTTTGCTGCTGC...CCCACGATGCTCAGGTTTGGTAACCCGGGAGTGTTCCCAGGTGGCCTTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTGAGGCCCGGGCGCACTaGGGCCTTGAGGTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPEARAH*GLEVLC
Trigger: ACAAAGCACCTCAAGGCCCAAGTGCGCCCGGGCCTC...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATTCGAGGCCCCACTTCTaGCAGGAGGTGACCCACCTG +
Preference number: 5 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHSRPHF*QEVTHL
Trigger: CAGGTGGGTCACCTCCTGCAAGAAGTGGGGCCTCGA...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp AAGTTCCTGGCCTCCTGCTTGGTAGGAGAGGAGGAACCTTGGGCTGAATCTGACTTCAAAGGGGCGAAATaGGAACCTGATTCCAAACTT +
Preference number: 5 (lower is better)
Translates to: KFLASCLVGEEEPWAESDFKGAK*EPDSKL
Trigger: AAGTTTGGAATCAGGTTCCAATTTCGCCCCTTTGAA...GTCAGATTCAGCCCAAGGTTCCTCCTCTCCTACCAAGCAGGAGGCCAGGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CCCACGCGACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCCTTTGGGAGTTTGTTTaGATTCTTTTGCCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: PTRLVCLFPFSAKTMKQSLWEFV*ILLPPL
Trigger: GAGAGGCGGCAAAAGAATCAAAACAAACTCCCAAAG...GGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGTCGCGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATCGTTCACAAAATCCGTaGTGCTGCACATTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHRSQNP*CCTFSV
Trigger: CACACTGAATGTGCAGCACAACGGATTTTGTGAACG...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CGAAACATCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGTGGCTGGCGTGAAGTaGCCGGGCGTTGTGGCAACG +
Preference number: 5 (lower is better)
Translates to: RNIDEYVCIPWMQFLLSWVAGVK*PGVVAT
Trigger: CGTTGCCACAACGCCCGGCAACTTCACGCCAGCCAC...CCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGATGTTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTTGCCAGTTACAAGCTTaGCTTTCTAAGGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCCQLQA*LSKATW
Trigger: CCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCA...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ACTTGTGTGTCTTTTCCCTTTCTCAGCCAAGACGATGAAGCAGTCCTGATGCGCTGCCAGTTACAAGCTTaGCTTTCTAAGGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: TCVSFPFLSQDDEAVLMRCQLQA*LSKATW
Trigger: CCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCA...GCGCATCAGGACTGCTTCATCGTCTTGGCTGAGAAAGGGAAAAGACACACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGGCTTCCTTGAGCTTCTaGCAGAGGGCCTCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: DEYVCIPWMQFLLSWGGKASLSF*QRASLP
Trigger: TGGCAGCGAGGCCCTCTGCAAGAAGCTCAAGGAAGC...CTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS CCA 90 bp CCAGTGAGTTGTACTGAAGTCCACTTCGGGCCATGGGTGTGTCTGTaGAAGCCATTTGATAAGATTGTCCCATTCATCATTCCAGTTCCG +
Preference number: 5 (lower is better)
Translates to: PVSCTEVHFGPWVCL*KPFDKIVPFIIPVP
Trigger: CGGAACTGGAATGATGAATGGGACAATCTTATCAAATGGCTTCCACAGACACACCCATGGCCCGAAGTGGACTTCAGTACAACTCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CAA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGAGCCTGAGGAAGGACTaGTTCAGCCATTGTGCTCTC +
Preference number: 5 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQSLRKD*FSHCAL
Trigger: GAGAGCACAATGGCTGAACAAGTCCTTCCTCAGGCT...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAACTGTCGATGAGGGCTTaGTGGATGATCTCCCGAAAC +
Preference number: 5 (lower is better)
Translates to: DAIPSFLGRQAKVYQRGQLSMRA*WMISRN
Trigger: GTTTCGGGAGATCATCCACAAAGCCCTCATCGACAG...TTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATCGTGTGTCTGTTTCCTaGAGCGTGCTGAACAGCGCC +
Preference number: 5 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHRVSVS*SVLNSA
Trigger: GGCGCTGTTCAGCACGCTCAAGGAAACAGACACACG...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GCCTCAGAATCACAGTCCATGGATGGTTCTGCATTTCTGCCGGGTCCTCAGGAATTTGAGAGACTCCAGTaGCCAGCGGAATTTAAAGTT +
Preference number: 5 (lower is better)
Translates to: ASESQSMDGSAFLPGPQEFERLQ*PAEFKV
Trigger: AACTTTAAATTCCGCTGGCAACTGGAGTCTCTCAAA...TTCCTGAGGACCCGGCAGAAATGCAGAACCATCCATGGACTGTGATTCTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GGAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTATGAAGAAGGGGCAGTaGGGCGTTTCACATTTTACA +
Preference number: 5 (lower is better)
Translates to: GEEEPWAESDIIPCQLQAMKKGQ*GVSHFT
Trigger: TGTAAAATGTGAAACGCCCAACTGCCCCTTCTTCAT...AGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TGCCCACAGCCTGACTCAAAGCAAGGATGTTCTCTCAGGAGAACACTGTGGCATAGTGTGCAAAAGCCCTaGTTTTCTGGAGTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: CPQPDSKQGCSLRRTLWHSVQKP*FSGVPK
Trigger: TTTTGGGACTCCAGAAAACAAGGGCTTTTGCACACT...ATGCCACAGTGTTCTCCTGAGAGAACATCCTTGCTTTGAGTCAGGCTGTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp AAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCTGGCTCGATCTCAGTaGCTCTTCTGTCCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: KSVSKRPIYSLWSGTCPQLARSQ*LFCPFG
Trigger: GCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCAG...CTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTCGTGTGTCTGTTTCCTaGAGCGTGCTGAACAGCGCC +
Preference number: 5 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPRVSVS*SVLNSA
Trigger: GGCGCTGTTCAGCACGCTCAAGGAAACAGACACACG...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp AAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCCTTTGGGAGTTTGTTTaGATTCTTTTGCCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: KCIKEANLLPVVRNLPTALWEFV*ILLPPL
Trigger: GAGAGGCGGCAAAAGAATCAAAACAAACTCCCAAAG...GGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATTTACTCCCTGTGGTCAGGAACTTGCCCACAGCCTGACTCAAAGCAAGGATGTTCTGCTGTAGTCCTTTaGAAGCAAGTACTGCAGATC +
Preference number: 5 (lower is better)
Translates to: IYSLWSGTCPQPDSKQGCSAVVL*KQVLQI
Trigger: GATCTGCAGTACTTGCTTCAAAAGGACTACAGCAGA...ACATCCTTGCTTTGAGTCAGGCTGTGGGCAAGTTCCTGACCACAGGGAGTAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCACTGGCTCGATCTCAGTaGCTCTTCTGTCCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: VYLGCNSFFPGEASKSVSLARSQ*LFCPFG
Trigger: GCCAAAAGGACAGAAGAGCAACTGAGATCGAGCCAG...TGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS TCA 90 bp TGGATGTTTCTGTCGATGAGGGCTTTGTGGATGATCTCCCGAAACTaGGGACAAAACTGGCAAGTTCTGAACATTTCCAGTGTGTATCGG +
Preference number: 5 (lower is better)
Translates to: WMFLSMRALWMISRN*GQNWQVLNISSVYR
Trigger: CCGATACACACTGGAAATGTTCAGAACTTGCCAGTTTTGTCCTCAGTTTCGGGAGATCATCCACAAAGCCCTCATCGACAGAAACATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237289.8
ENST00000420009.5
ENST00000433680.1
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS TCA 90 bp CCTTCTGAGGATGTTGCAAAGGACAAATATGTGTATTTCTTCCAGTaGGTTGTACTGAAGTCCACTTCGGGCCATGGGTGTGTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: PSEDVAKDKYVYFFQ*VVLKSTSGHGCVCG
Trigger: TCCACAGACACACCCATGGCCCGAAGTGGACTTCAGTACAACTCACTGGAAGAAATACACATATTTGTCCTTTGCAACATCCTCAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS GCA 90 bp TGTCTTCTGGAGTTCTCTCCCGTATCTTCACAGCTTTCCGCATATTaGTCAAATACAAAGCCTGAGGAAGGACTTGTTCAGCCATTGTGC +
Preference number: 5 (lower is better)
Translates to: CLLEFSPVSSQLSAY*SNTKPEEGLVQPLC
Trigger: GCACAATGGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGAGCAATATGCGGAAAGCTGTGAAGATACGGGAGAGAACTCCAGAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000237289.8
ENST00000420009.5
ENST00000433680.1
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS-3UTR CAA 90 bp AATAAAACCATCACAAAAGGCCACATCTTTCCCTGTGACCATTGCCAGTCTCATCTGTCGATGAGGGCTTaGTGGATGATCTCCCGAAAC +
Preference number: 5 (lower is better)
Translates to: NKTITKGHIFPCDHCQSHLSMRA*WMISRN
Trigger: GTTTCGGGAGATCATCCACAAAGCCCTCATCGACAG...ATGAGACTGGCAATGGTCACAGGGAAAGATGTGGCCTTTTGTGATGGTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCCCACAACTTCTCGACACCAGTaGAGTTTCTTCTGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: QKCIKEANLLPVVRNLPTTSRHQ*SFFWLS
Trigger: GGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAGT...TGTGGGCAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TCGATGAATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAGCATGCATGAGGCAATaGCCGTCACCGTTCGTTTTC +
Preference number: 5 (lower is better)
Translates to: SMNMYVYLGCNSFFPGEAACMRQ*PSPFVF
Trigger: GAAAACGAACGGTGACGGCAATTGCCTCATGCATGC...TGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATATTCATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GAGAGGAGGAACCTTGGGCTGAATCTGACATCATCCCTTGCCAGTTACAAGCTTTTCAAAGGGGCGAAATaGGAACCTGATTCCAAACTT +
Preference number: 5 (lower is better)
Translates to: ERRNLGLNLTSSLASYKLFKGAK*EPDSKL
Trigger: AAGTTTGGAATCAGGTTCCAATTTCGCCCCTTTGAA...AAGCTTGTAACTGGCAAGGGATGATGTCAGATTCAGCCCAAGGTTCCTCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCATCTGCTGTAGTCCTTTaGAAGCAAGTACTGCAGATC +
Preference number: 5 (lower is better)
Translates to: GCNSFFPGEASKSVSKRPSAVVL*KQVLQI
Trigger: GATCTGCAGTACTTGCTTCAAAAGGACTACAGCAGA...TGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCACATGGTTACTGGCTTTaGCTGTCCCAATACCAGGGT +
Preference number: 5 (lower is better)
Translates to: VYLGCNSFFPGEASKSVSHGYWL*LSQYQG
Trigger: ACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG...TGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS CCA 90 bp TGTGTATTTCTTCCAGTGAGTTGTACTGAAGTCCACTTCGGGCCATaGGTGTGTCTGTGGAAGCCATTTGATAAGATTGTCCCATTCATC +
Preference number: 5 (lower is better)
Translates to: CVFLPVSCTEVHFGP*VCLWKPFDKIVPFI
Trigger: GATGAATGGGACAATCTTATCAAATGGCTTCCACAGACACACCCATGGCCCGAAGTGGACTTCAGTACAACTCACTGGAAGAAATACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CAA 90 bp AACAGAAAGAGATTTCCTCATACTCATGGTTACTGGCTTTTGCTGTCCCAATACGGACTTGTTCAGCCATaGTGCTCTCCAACACCTCTC +
Preference number: 5 (lower is better)
Translates to: NRKRFPHTHGYWLLLSQYGLVQP*CSPTPL
Trigger: GAGAGGTGTTGGAGAGCACAATGGCTGAACAAGTCC...GTATTGGGACAGCAAAAGCCAGTAACCATGAGTATGAGGAAATCTCTTTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS-3UTR CAA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTCTGTCGATGAGGGCTTaGTGGATGATCTCCCGAAAC +
Preference number: 5 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPLSMRA*WMISRN
Trigger: GTTTCGGGAGATCATCCACAAAGCCCTCATCGACAG...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGCTTTGGGAGTTTGTTTaGATTCTTTTGCCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: GKQKCIKEANLLPVVRNLLWEFV*ILLPPL
Trigger: GAGAGGCGGCAAAAGAATCAAAACAAACTCCCAAAG...CAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTTGCCAGTTACAAGCTTaGCTTTCTAAGGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: IPSFLGRQAKVYQRGQFTCQLQA*LSKATW
Trigger: CCAGGTGGCCTTAGAAAGCAAAGCTTGTAACTGGCA...AGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCATGGTTACTGGCTTTaGCTGTCCCAATACCAGGGT +
Preference number: 5 (lower is better)
Translates to: IPSFLGRQAKVYQRGQFTHGYWL*LSQYQG
Trigger: ACCCTGGTATTGGGACAGCAAAAGCCAGTAACCATG...AGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237289.8
ENST00000612899.5
CDS TCA 90 bp ATGTTGCAAAGGACAAATATGTGTATTTCTTCCAGTGAGTTGTACTaGAGTCCACTTCGGGCCATGGGTGTGTCTGTGGAAGCCATTTTG +
Preference number: 5 (lower is better)
Translates to: MLQRTNMCISSSELY*SPLRAMGVSVEAIL
Trigger: CAAAATGGCTTCCACAGACACACCCATGGCCCGAAGTGGACTTCAGTACAACTCACTGGAAGAAATACACATATTTGTCCTTTGCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000614035.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS-3UTR CAA 90 bp CAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATTATTAGCATGCATGAGGCAATaGCCGTCACCGTTCGTTTTC +
Preference number: 5 (lower is better)
Translates to: QCIHKLMPQQQPENRLLLACMRQ*PSPFVF
Trigger: GAAAACGAACGGTGACGGCAATTGCCTCATGCATGC...TAATAATAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTTTTGAGAGACTCCAGTaGCCAGCGGAATTTAAAGTT +
Preference number: 5 (lower is better)
Translates to: SFLGRQAKVYQRGQFTPCFERLQ*PAEFKV
Trigger: AACTTTAAATTCCGCTGGCAACTGGAGTCTCTCAAA...ACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp GGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCCTGTGGTCAGGAACTTGTTCAAAGGGGCGAAATaGGAACCTGATTCCAAACTT +
Preference number: 5 (lower is better)
Translates to: GKQKCIKEANLLPVVRNLFKGAK*EPDSKL
Trigger: AAGTTTGGAATCAGGTTCCAATTTCGCCCCTTTGAA...CAAGTTCCTGACCACAGGGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TGCAAGCAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTACTTTGGGAGTTTGTTTaGATTCTTTTGCCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: CKQCIHKLMPQQQPENRLLWEFV*ILLPPL
Trigger: GAGAGGCGGCAAAAGAATCAAAACAAACTCCCAAAG...TAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTGCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCGTTCACAAAATCCGTaGTGCTGCACATTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: IPSFLGRQAKVYQRGQFTRSQNP*CCTFSV
Trigger: CACACTGAATGTGCAGCACAACGGATTTTGTGAACG...AGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ACCTGTTTCCGGTTAGCCATACATCTGCTTGAACTGAAAGCATTCGTTGCAGTAAGTGTGCAAAAGCCCTaGTTTTCTGGAGTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: TCFRLAIHLLELKAFVAVSVQKP*FSGVPK
Trigger: TTTTGGGACTCCAGAAAACAAGGGCTTTTGCACACT...TACTGCAACGAATGCTTTCAGTTCAAGCAGATGTATGGCTAACCGGAAACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGAGGCCAATTTACTCCGCAGCAGCAAAATGTTaGTTTTCTCTGTACTCGATG +
Preference number: 5 (lower is better)
Translates to: SFFPGEASKSVSKRPIYSAAAKC*FSLYSM
Trigger: CATCGAGTACAGAGAAAACAAACATTTTGCTGCTGC...GGAGTAAATTGGCCTCTTTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAATGAAGAAGGGGCAGTaGGGCGTTTCACATTTTACA +
Preference number: 5 (lower is better)
Translates to: YTLDAIPSFLGRQAKVYQMKKGQ*GVSHFT
Trigger: TGTAAAATGTGAAACGCCCAACTGCCCCTTCTTCAT...TTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp TATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAGTGTATCAAAGTGTGCAAAAGCCCTaGTTTTCTGGAGTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: YTLDAIPSFLGRQAKVYQSVQKP*FSGVPK
Trigger: TTTTGGGACTCCAGAAAACAAGGGCTTTTGCACACT...TTGATACACTTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAATGAAGAAGGGGCAGTaGGGCGTTTCACATTTTACA +
Preference number: 5 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKMKKGQ*GVSHFT
Trigger: TGTAAAATGTGAAACGCCCAACTGCCCCTTCTTCAT...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp CAGTGTATACACAAGCTCATGCCCCAACAACAACCAGAAAACAGGTTATTATTACGTTCACAAAATCCGTaGTGCTGCACATTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: QCIHKLMPQQQPENRLLLRSQNP*CCTFSV
Trigger: CACACTGAATGTGCAGCACAACGGATTTTGTGAACG...TAATAATAACCTGTTTTCTGGTTGTTGTTGGGGCATGAGCTTGTGTATACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATAAAGAGCAGCTTGTTTTTCTGTCAATGTGAACATGTTCAGTCTCAGCAGCCTGCAGCAGCAAAATGTTaGTTTTCTCTGTACTCGATG +
Preference number: 5 (lower is better)
Translates to: IKSSLFFCQCEHVQSQQPAAAKC*FSLYSM
Trigger: CATCGAGTACAGAGAAAACAAACATTTTGCTGCTGC...AGGCTGCTGAGACTGAACATGTTCACATTGACAGAAAAACAAGCTGCTCTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS-3UTR CAA 90 bp ATATGTATGTATACCTTGGATGCAATTCCTTCTTTCCTGGGGAGGCAAGCAAAAAGCCATTTGATAAGATaGTCCCATTCATCATTCCAG +
Preference number: 5 (lower is better)
Translates to: ICMYTLDAIPSFLGRQAKSHLIR*SHSSFQ
Trigger: CTGGAATGATGAATGGGACAATCTTATCAAATGGCT...TTTTGCTTGCCTCCCCAGGAAAGAAGGAATTGCATCCAAGGTATACATACATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS-3UTR CAA 90 bp CTGGAGTTTCATAAGGAGAAGCACGAAACATCGATGAATATGTATGTATACCTTGCAGCAGCAAAATGTTaGTTTTCTCTGTACTCGATG +
Preference number: 5 (lower is better)
Translates to: LEFHKEKHETSMNMYVYLAAAKC*FSLYSM
Trigger: CATCGAGTACAGAGAAAACAAACATTTTGCTGCTGC...AAGGTATACATACATATTCATCGATGTTTCGTGCTTCTCCTTATGAAACTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000615468.4
ENST00000620204.3
CDS CCA 90 bp TTTAAAATGATGAATGATCCCATTAGTAGGTTTAAAAATGTCTTCTaGAGTTCTCTCCCGTATCTTCACAGCTTTCCGCATATTGCTCAA +
Preference number: 5 (lower is better)
Translates to: FKMMNDPISRFKNVF*SSLPYLHSFPHIAQ
Trigger: TTGAGCAATATGCGGAAAGCTGTGAAGATACGGGAGAGAACTCCAGAAGACATTTTTAAACCTACTAATGGGATCATTCATCATTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000237289.8
ENST00000420009.5
ENST00000433680.1
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS CCA 72 bp GCAGGGACCGGGCGGAGGCGACGCTCCATGGACGCCTaGGGTCGGGCTCGCTCGCTGGCAGGGTCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: AGTGRRRRSMDA*GRARSLAGSAG
Trigger: CCCAGCCGACCCTGCCAGCGAGCGAGCCCGACCCCAGGCGTCCATGGAGCGTCGCCTCCGCCCGGTCCCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420009.5
ENST00000421450.1
ENST00000612899.5
CDS CCA 72 bp GGGTCGGGGCAGGGACCGGGCGGAGGCGACGCTCCATaGACGCCTGGGGTCGGGCTCGCTCGCTGGCAGGGT +
Preference number: 6 (lower is better)
Translates to: GSGQGPGGGDAP*TPGVGLARWQG
Trigger: ACCCTGCCAGCGAGCGAGCCCGACCCCAGGCGTCCATGGAGCGTCGCCTCCGCCCGGTCCCTGCCCCGACCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420009.5
ENST00000421450.1
ENST00000612899.5
CDS CCA 72 bp CTCGCTGGCAGGGTCGGCTGGGGGTGTGATCTCTCTTaGCGGCCGCTCTCACCGCTCCGCCCCCGCGGGCTC +
Preference number: 6 (lower is better)
Translates to: LAGRVGWGCDLS*RPLSPLRPRGL
Trigger: GAGCCCGCGGGGGCGGAGCGGTGAGAGCGGCCGCCAAGAGAGATCACACCCCCAGCCGACCCTGCCAGCGAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421450.1
ENST00000612899.5
CDS CAA 90 bp TGGCGGCCGCTCTCACCGCTCCGCCCCCGCGGGCTCCAAGCTCGCTaGGCCCGCCACGAAGACTGCAGACTGCGCAGTCTGCTTTGCCCC +
Preference number: 6 (lower is better)
Translates to: WRPLSPLRPRGLQAR*ARHEDCRLRSLLCP
Trigger: GGGGCAAAGCAGACTGCGCAGTCTGCAGTCTTCGTGGCGGGCCAAGCGAGCTTGGAGCCCGCGGGGGCGGAGCGGTGAGAGCGGCCGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421450.1
CDS CCA 72 bp CCGGGCCCCGCGATCCTTTCGCAAAGTCCCAAGTCCTaGTCAAGGCAGGAGCGCGCCGCAGGCGGGGGTCGG +
Preference number: 6 (lower is better)
Translates to: PGPAILSQSPKS*SRQERAAGGGR
Trigger: CCGACCCCCGCCTGCGGCGCGCTCCTGCCTTGACCAGGACTTGGGACTTTGCGAAAGGATCGCGGGGCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420009.5
ENST00000421450.1
ENST00000612899.5
CDS CCA 72 bp TCTCACCGCTCCGCCCCCGCGGGCTCCAAGCTCGCTTaGCCCGCCACGAAGACTGCAGACTGCGCAGTCTGC +
Preference number: 6 (lower is better)
Translates to: SHRSAPAGSKLA*PATKTADCAVC
Trigger: GCAGACTGCGCAGTCTGCAGTCTTCGTGGCGGGCCAAGCGAGCTTGGAGCCCGCGGGGGCGGAGCGGTGAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421450.1
CDS GCA 72 bp TCCAGGAGCGCTGCAAAACCAACGCCAGGTAGACGGTaGCAGCCCGGGGGTCGCTGCCCAACATGCACCCGC +
Preference number: 6 (lower is better)
Translates to: SRSAAKPTPGRR*QPGGRCPTCTR
Trigger: GCGGGTGCATGTTGGGCAGCGACCCCCGGGCTGGCACCGTCTACCTGGCGTTGGTTTTGCAGCGCTCCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433680.1
CDS CAA 72 bp GGAGGCAGGCTTGGCACTTCCCGGGATCCAAGTGCCTaGTGTGGTCTGGGGCGTGGCTGGCGAAGTTGCCGG +
Preference number: 6 (lower is better)
Translates to: GGRLGTSRDPSA*CGLGRGWRSCR
Trigger: CCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS CCA 72 bp TTGGCACTTCCCGGGATCCAAGTGCCTTGTGTGGTCTaGGGCGTGGCTGGCGAAGTTGCCGGGCGTTGTGGC +
Preference number: 6 (lower is better)
Translates to: LALPGIQVPCVV*GVAGEVAGRCG
Trigger: GCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS CCA 72 bp CAGGCTTGGCACTTCCCGGGATCCAAGTGCCTTGTGTaGTCTGGGGCGTGGCTGGCGAAGTTGCCGGGCGTT +
Preference number: 6 (lower is better)
Translates to: QAWHFPGSKCLV*SGAWLAKLPGV
Trigger: AACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAAGTGCCAAGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS GCA 72 bp CGCGGGCTCCAAGCTCGCTTGGCCCGCCACGAAGACTaGAGACTGCGCAGTCTGCTTTGCCCCGTTTCAGTT +
Preference number: 6 (lower is better)
Translates to: RGLQARLARHED*RLRSLLCPVSV
Trigger: AACTGAAACGGGGCAAAGCAGACTGCGCAGTCTGCAGTCTTCGTGGCGGGCCAAGCGAGCTTGGAGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421450.1
CDS CCA 72 bp TTCCCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTaGCTGGCGAAGTTGCCGGGCGTTGTGGCAACGTTC +
Preference number: 6 (lower is better)
Translates to: FPGSKCLVWSGA*LAKLPGVVATF
Trigger: GAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS GCA 72 bp CCCAGGGCCCATCCTCTGGTTGATGCTGACACTCCATaGAGAGCTCCTCGCTGCGGCAGGCCAGGATGTTCT +
Preference number: 6 (lower is better)
Translates to: PRAHPLVDADTP*RAPRCGRPGCS
Trigger: AGAACATCCTGGCCTGCCGCAGCGAGGAGCTCTGCATGGAGTGTCAGCATCAACCAGAGGATGGGCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619035.4
CDS CCA 72 bp CGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTaGCGAAGTTGCCGGGCGTTGTGGCAACGTTCACAA +
Preference number: 6 (lower is better)
Translates to: RDPSALCGLGRG*RSCRALWQRSQ
Trigger: TTGTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS CAA 90 bp CCGGGATCCAAGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGAAGTaGCCGGGCGTTGTGGCAACGTTCACAAAATCCGTTGTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: PGSKCLVWSGAWLAK*PGVVATFTKSVVLH
Trigger: GTGCAGCACAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS GCA 72 bp GCTTGGCCCGCCACGAAGACTGCAGACTGCGCAGTCTaGTTTGCCCCGTTTCAGTTGTATGCGGGTTGTAGG +
Preference number: 6 (lower is better)
Translates to: AWPATKTADCAV*FAPFQLYAGCR
Trigger: CCTACAACCCGCATACAACTGAAACGGGGCAAAGCAGACTGCGCAGTCTGCAGTCTTCGTGGCGGGCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421450.1
CDS GCA 72 bp TCCAAGCTCGCTTGGCCCGCCACGAAGACTGCAGACTaGGCAGTCTGCTTTGCCCCGTTTCAGTTGTATGCG +
Preference number: 6 (lower is better)
Translates to: SKLAWPATKTAD*AVCFAPFQLYA
Trigger: CGCATACAACTGAAACGGGGCAAAGCAGACTGCGCAGTCTGCAGTCTTCGTGGCGGGCCAAGCGAGCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421450.1
CDS GCA 72 bp AGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGAAGTTaGCGGGCGTTGTGGCAACGTTCACAAAATCCGTTG +
Preference number: 6 (lower is better)
Translates to: SALCGLGRGWRS*RALWQRSQNPL
Trigger: CAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS CCA 72 bp GGTCTGGGGCGTGGCTGGCGAAGTTGCCGGGCGTTGTaGCAACGTTCACAAAATCCGTTGTGCTGCACATTC +
Preference number: 6 (lower is better)
Translates to: GLGRGWRSCRAL*QRSQNPLCCTF
Trigger: GAATGTGCAGCACAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS CAA 72 bp TGTGGTCTGGGGCGTGGCTGGCGAAGTTGCCGGGCGTaGTGGCAACGTTCACAAAATCCGTTGTGCTGCACA +
Preference number: 6 (lower is better)
Translates to: CGLGRGWRSCRA*WQRSQNPLCCT
Trigger: TGTGCAGCACAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS CAA 90 bp AGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGAAGTTGCCGGGCGTaGTGGCAACGTTCACAAAATCCGTTGTGCTGCACATTCAGTGTG +
Preference number: 6 (lower is better)
Translates to: SALCGLGRGWRSCRA*WQRSQNPLCCTFSV
Trigger: CACACTGAATGTGCAGCACAACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS CAA 72 bp AAGTGCCTTGTGTGGTCTGGGGCGTGGCTGGCGAAGTaGCCGGGCGTTGTGGCAACGTTCACAAAATCCGTT +
Preference number: 6 (lower is better)
Translates to: KCLVWSGAWLAK*PGVVATFTKSV
Trigger: AACGGATTTTGTGAACGTTGCCACAACGCCCGGCAACTTCGCCAGCCACGCCCCAGACCACACAAGGCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621150.3
CDS CAA 72 bp TCAAATACAAAGCCTGAGGAAGGACTTGTTCAGCCATaGTGCTCTCCAACACCTCTCCGGGAGGCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: SNTKPEEGLVQP*CSPTPLREARR
Trigger: CCGCCGCGCCTCCCGGAGAGGTGTTGGAGAGCACAATGGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420009.5
ENST00000421450.1
ENST00000612899.5
CDS TCA 72 bp CCTGAACGCCCCACATGTACTGAGAAGTGGCATGCATaGGGCAATTGCCGTCACCGTTCGTTTTCAGCGCCA +
Preference number: 6 (lower is better)
Translates to: PERPTCTEKWHA*GNCRHRSFSAP
Trigger: TGGCGCTGAAAACGAACGGTGACGGCAATTGCCTCATGCATGCCACTTCTCAGTACATGTGGGGCGTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000237289.8
ENST00000420009.5
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS CAA 72 bp TCAAATACAAAGCCTGAGGAAGGACTTGTTCAGCCATaGTGCTCTCCAACACCTCTCCGGGCCCCGCGATCC +
Preference number: 6 (lower is better)
Translates to: SNTKPEEGLVQP*CSPTPLRAPRS
Trigger: GGATCGCGGGGCCCGGAGAGGTGTTGGAGAGCACAATGGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237289.8
CDS CAA 72 bp TTCAGCGCCACAAGCTTCCGGACTTCTCGACACCAGTaGAGTTTCTTCTGGCTTTCCAGGGTGGCCTGGATG +
Preference number: 6 (lower is better)
Translates to: FSATSFRTSRHQ*SFFWLSRVAWM
Trigger: CATCCAGGCCACCCTGGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAGTCCGGAAGCTTGTGGCGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000237289.8
ENST00000420009.5
ENST00000433680.1
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS CAA 90 bp CCGTTCGTTTTCAGCGCCACAAGCTTCCGGACTTCTCGACACCAGTaGAGTTTCTTCTGGCTTTCCAGGGTGGCCTGGATGTTTCTGTCG +
Preference number: 6 (lower is better)
Translates to: PFVFSATSFRTSRHQ*SFFWLSRVAWMFLS
Trigger: CGACAGAAACATCCAGGCCACCCTGGAAAGCCAGAAGAAACTCAACTGGTGTCGAGAAGTCCGGAAGCTTGTGGCGCTGAAAACGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000237289.8
ENST00000420009.5
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS CAA 90 bp CACAGCTTTCCGCATATTGCTCAAATACAAAGCCTGAGGAAGGACTaGTTCAGCCATTGTGCTCTCCAACACCTCTCCGGGAGGCGCGGC +
Preference number: 6 (lower is better)
Translates to: HSFPHIAQIQSLRKD*FSHCALQHLSGRRG
Trigger: GCCGCGCCTCCCGGAGAGGTGTTGGAGAGCACAATGGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGAGCAATATGCGGAAAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420009.5
ENST00000421450.1
ENST00000612899.5
CDS CAA 90 bp CACAGCTTTCCGCATATTGCTCAAATACAAAGCCTGAGGAAGGACTaGTTCAGCCATTGTGCTCTCCAACACCTCTCCGGGCCCCGCGAT +
Preference number: 6 (lower is better)
Translates to: HSFPHIAQIQSLRKD*FSHCALQHLSGPRD
Trigger: ATCGCGGGGCCCGGAGAGGTGTTGGAGAGCACAATGGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGAGCAATATGCGGAAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237289.8
CDS CAA 72 bp CCGCATATTGCTCAAATACAAAGCCTGAGGAAGGACTaGTTCAGCCATTGTGCTCTCCAACACCTCTCCGGG +
Preference number: 6 (lower is better)
Translates to: PHIAQIQSLRKD*FSHCALQHLSG
Trigger: CCCGGAGAGGTGTTGGAGAGCACAATGGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGAGCAATATGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237289.8
ENST00000420009.5
ENST00000421450.1
ENST00000612899.5
CDS CAA 90 bp CACAGCTTTCCGCATATTGCTCAAATACAAAGCCTGAGGAAGGACTaGTTCAGCCATTGTGCTCTCCAACACCTCTGCAGCAGTGACCTC +
Preference number: 6 (lower is better)
Translates to: HSFPHIAQIQSLRKD*FSHCALQHLCSSDL
Trigger: GAGGTCACTGCTGCAGAGGTGTTGGAGAGCACAATGGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGAGCAATATGCGGAAAGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433680.1
CDS CAA 72 bp CCGCATATTGCTCAAATACAAAGCCTGAGGAAGGACTaGTTCAGCCATTGTGCTCTCCAACACCTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PHIAQIQSLRKD*FSHCALQHLCS
Trigger: GCTGCAGAGGTGTTGGAGAGCACAATGGCTGAACAAGTCCTTCCTCAGGCTTTGTATTTGAGCAATATGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433680.1
CDS CCA 72 bp CTTCCAGTGAGTTGTACTGAAGTCCACTTCGGGCCATaGGTGTGTCTGTGGAAGCCATTTGATAAGATTGTC +
Preference number: 6 (lower is better)
Translates to: LPVSCTEVHFGP*VCLWKPFDKIV
Trigger: GACAATCTTATCAAATGGCTTCCACAGACACACCCATGGCCCGAAGTGGACTTCAGTACAACTCACTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS TCA 72 bp CTGTCGATGAGGGCTTTGTGGATGATCTCCCGAAACTaGGGACAAAACTGGCAAGTTCTGAACATTTCCAGT +
Preference number: 6 (lower is better)
Translates to: LSMRALWMISRN*GQNWQVLNISS
Trigger: ACTGGAAATGTTCAGAACTTGCCAGTTTTGTCCTCAGTTTCGGGAGATCATCCACAAAGCCCTCATCGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000237289.8
ENST00000420009.5
ENST00000433680.1
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS TCA 72 bp AGGACAAATATGTGTATTTCTTCCAGTGAGTTGTACTaGAGTCCACTTCGGGCCATGGGTGTGTCTGTGGAA +
Preference number: 6 (lower is better)
Translates to: RTNMCISSSELY*SPLRAMGVSVE
Trigger: TTCCACAGACACACCCATGGCCCGAAGTGGACTTCAGTACAACTCACTGGAAGAAATACACATATTTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS CCA 72 bp TGTACTGAAGTCCACTTCGGGCCATGGGTGTGTCTGTaGAAGCCATTTGATAAGATTGTCCCATTCATCATT +
Preference number: 6 (lower is better)
Translates to: CTEVHFGPWVCL*KPFDKIVPFII
Trigger: AATGATGAATGGGACAATCTTATCAAATGGCTTCCACAGACACACCCATGGCCCGAAGTGGACTTCAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615468.4
CDS TCA 72 bp GATGTTGCAAAGGACAAATATGTGTATTTCTTCCAGTaGGTTGTACTGAAGTCCACTTCGGGCCATGGGTGT +
Preference number: 6 (lower is better)
Translates to: DVAKDKYVYFFQ*VVLKSTSGHGC
Trigger: ACACCCATGGCCCGAAGTGGACTTCAGTACAACTCACTGGAAGAAATACACATATTTGTCCTTTGCAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3
CDS CAA 72 bp TTGTCTGAAATGACAATGATTGGCCTTCTGAGGATGTaGCAAAGGACAAATATGTGTATTTCTTCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: LSEMTMIGLLRM*QRTNMCISSSE
Trigger: CTCACTGGAAGAAATACACATATTTGTCCTTTGCAACATCCTCAGAAGGCCAATCATTGTCATTTCAGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237289.8
ENST00000612899.5
ENST00000614035.4
ENST00000615468.4
ENST00000619035.4
ENST00000620204.3
ENST00000621150.3