RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFAIP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185215

Ensembl transcript IDs: ENST00000333007.8, ENST00000558056.1, ENST00000559195.5, ENST00000559255.1, ENST00000559406.5, ENST00000560428.1, ENST00000560562.5, ENST00000560670.5, ENST00000560869.6, ENST00000561156.1, ENST00000561217.1

Found 762 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTCCTGCAGGCGAATGATCTCGGCCAGCGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAGCCCTCCCGGAAACAGCCCTGCAGC +
Preference number: 1 (lower is better)
Translates to: GSCRRMISASVGRAG*SQVAGEPSRKQPCS
Trigger: GCTGCAGGGCTGTTTCCGGGAGGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCTGGCCGAGATCATTCGCCTGCAGGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560562.5
3UTR GCA 90 bp GGGTCCTGCAGGCGAATGATCTCGGCCAGCGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCAGAAGTGCTGG +
Preference number: 1 (lower is better)
Translates to: GSCRRMISASVGRAG*SQVAGEPCWVQKCW
Trigger: CCAGCACTTCTGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCTGGCCGAGATCATTCGCCTGCAGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR TCA 90 bp TGCAGAGGGCAGATGGGTGAGGCTCGGCCCCTGTCTCCAGAGAGCTaGAGAGGGCCCTCGGCCCCACCCACGAGGAGGACAGTCATGAGG +
Preference number: 1 (lower is better)
Translates to: CRGQMGEARPLSPES*RGPSAPPTRRTVMR
Trigger: CCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAGGGCCCTCTTCAGCTCTCTGGAGACAGGGGCCGAGCCTCACCCATCTGCCCTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR CCA 90 bp ATTGCTGAATCCCGCTCACGGCGGCCCTGGGCTGCAGAGGGCAGATaGGTGAGGCTCGGCCCCTGTCTCCAGAGAGCTGAAGAGGGCCCT +
Preference number: 1 (lower is better)
Translates to: IAESRSRRPWAAEGR*VRLGPCLQRAEEGP
Trigger: AGGGCCCTCTTCAGCTCTCTGGAGACAGGGGCCGAGCCTCACCCATCTGCCCTCTGCAGCCCAGGGCCGCCGTGAGCGGGATTCAGCAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR TCA 90 bp CCCATTGCAGGGCCAGCCTGTAGGGGCCGTGGGGCCACCTGGATGTaGCGTCTAATGCTGGCGGTGCTCACAGCTCGCCACAGGACCCTA +
Preference number: 1 (lower is better)
Translates to: PIAGPACRGRGATWM*RLMLAVLTARHRTL
Trigger: TAGGGTCCTGTGGCGAGCTGTGAGCACCGCCAGCATTAGACGTCACATCCAGGTGGCCCCACGGCCCCTACAGGCTGGCCCTGCAATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR TCA 90 bp GGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCTCTTaGGCTCACCCAGGGGGCCCAGCAGGAGGCTCAGGGTGTCCTGGG +
Preference number: 1 (lower is better)
Translates to: GPHAGSGAGCQSRGS*AHPGGPAGGSGCPG
Trigger: CCCAGGACACCCTGAGCCTCCTGCTGGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CCA 90 bp ATGATGTCGATGGCCAGCTCGCTGTGGCAGTGGCCGTCCAGCCTCTaGGGAGGCACATCCTCAGCCCAGCGCCGTGCCTCTAGCTCCAGA +
Preference number: 1 (lower is better)
Translates to: MMSMASSLWQWPSSL*GGTSSAQRRASSSR
Trigger: TCTGGAGCTAGAGGCACGGCGCTGGGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCTGGCCATCGACATCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR CCA 90 bp TGGGAGGTGATCTGGATGATGTCGATGGCCAGCTCGCTGTGGCAGTaGCCGTCCAGCCTCTGGGGAGGCACATCCTCAGCCCAGCGCCGT +
Preference number: 1 (lower is better)
Translates to: WEVIWMMSMASSLWQ*PSSLWGGTSSAQRR
Trigger: ACGGCGCTGGGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCTGGCCATCGACATCATCCAGATCACCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR CCA 90 bp TGGGCCTGGGAGGTGATCTGGATGATGTCGATGGCCAGCTCGCTGTaGCAGTGGCCGTCCAGCCTCTGGGGAGGCACATCCTCAGCCCAG +
Preference number: 1 (lower is better)
Translates to: WAWEVIWMMSMASSL*QWPSSLWGGTSSAQ
Trigger: CTGGGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCTGGCCATCGACATCATCCAGATCACCTCCCAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR TCA 90 bp AGGCCGACTGTGGAGGGGCTCTGGACAGAGGTGTCCGGGGATCCCTaGGCCTGGCTGCACTCTCCCTCCTGGTTCTTTCCTTGCGTGCAC +
Preference number: 1 (lower is better)
Translates to: RPTVEGLWTEVSGDP*AWLHSPSWFFPCVH
Trigger: GTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAGCCAGGCTCAGGGATCCCCGGACACCTCTGTCCAGAGCCCCTCCACAGTCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR TCA 90 bp AGCCGGGCTGAGTCATGCCTGAGTCCGAAGGGCCCCCTCTCAGGCTaGGAAGGAACTTTCAGGCCCAGGGAGGAGCAGAGCCTTAGGGGG +
Preference number: 1 (lower is better)
Translates to: SRAESCLSPKGPLSG*EGTFRPREEQSLRG
Trigger: CCCCCTAAGGCTCTGCTCCTCCCTGGGCCTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCCCTTCGGACTCAGGCATGACTCAGCCCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR TCA 90 bp CCTCAGGAACGCAGGCAGCTCCACCAGCAGCACCCGCTTTATCTGTaGGCCCAAGTCCAGCGTGATGCTCTCGGCCTTGGCCTGGGCCTG +
Preference number: 1 (lower is better)
Translates to: PQERRQLHQQHPLYL*AQVQRDALGLGLGL
Trigger: CAGGCCCAGGCCAAGGCCGAGAGCATCACGCTGGACTTGGGCTCACAGATAAAGCGGGTGCTGCTGGTGGAGCTGCCTGCGTTCCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR GCA 90 bp AGGGGACGGACCCAAGAGAGCCGGCCCCAAATCCTGACTCAGCACTaGAGAGGCATCAGCCGGGCTGAGTCATGCCTGAGTCCGAAGGGC +
Preference number: 1 (lower is better)
Translates to: RGRTQESRPQILTQH*RGISRAESCLSPKG
Trigger: GCCCTTCGGACTCAGGCATGACTCAGCCCGGCTGATGCCTCTGCAGTGCTGAGTCAGGATTTGGGGCCGGCTCTCTTGGGTCCGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR CCA 90 bp TCTGTCTTCCATTCCACCATTGCTGAATCCCGCTCACGGCGGCCCTaGGCTGCAGAGGGCAGATGGGTGAGGCTCGGCCCCTGTCTCCAG +
Preference number: 1 (lower is better)
Translates to: SVFHSTIAESRSRRP*AAEGRWVRLGPCLQ
Trigger: CTGGAGACAGGGGCCGAGCCTCACCCATCTGCCCTCTGCAGCCCAGGGCCGCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR CCA 90 bp GGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTaGCTCTTGAGCTCACCCAGGGGGCCCAGCAGGAGGCTCAGGGTG +
Preference number: 1 (lower is better)
Translates to: GFRSSCRFWSRVSKP*LLSSPRGPSRRLRV
Trigger: CACCCTGAGCCTCCTGCTGGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR TCA 90 bp CCTGCAGCTCTGAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATaGTGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCG +
Preference number: 1 (lower is better)
Translates to: PAALRTQAASCLQWR*CFPGSPQGPPSGCA
Trigger: CGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTCAGAGCTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559406.5
ENST00000560562.5
ENST00000561156.1
3UTR GCA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTaGCCAAGGCTTGCTGGGCACTCACAGGCAGGTCAGGCCACAGGA +
Preference number: 1 (lower is better)
Translates to: RNREPALLLTAPSGV*PRLAGHSQAGQATG
Trigger: TCCTGTGGCCTGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
3UTR GCA 90 bp TGGATGGTGTCAGCATTGGCCAGGATGTACCCAGCCAGCTGCTGCTaGTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTTGG +
Preference number: 1 (lower is better)
Translates to: WMVSALARMYPASCC*CSAVLRTRRPLLSW
Trigger: CCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACATCCTGGCCAATGCTGACACCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR GCA 90 bp TGCTGGATGGTGTCAGCATTGGCCAGGATGTACCCAGCCAGCTGCTaGTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGT +
Preference number: 1 (lower is better)
Translates to: CWMVSALARMYPASC*CCSAVLRTRRPLLS
Trigger: ACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACATCCTGGCCAATGCTGACACCATCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR CCA 90 bp CTCTTGAGCTCACCCAGGGGGCCCAGCAGGAGGCTCAGGGTGTCCTaGGGTACCTGCCAATTCTGCTCCATGGACATCCGGAAGGACAGG +
Preference number: 1 (lower is better)
Translates to: LLSSPRGPSRRLRVS*GTCQFCSMDIRKDR
Trigger: CCTGTCCTTCCGGATGTCCATGGAGCAGAATTGGCAGGTACCCCAGGACACCCTGAGCCTCCTGCTGGGCCCCCTGGGTGAGCTCAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR GCA 90 bp TGGAGGGGCTCTGGACAGAGGTGTCCGGGGATCCCTGAGCCTGGCTaGACTCTCCCTCCTGGTTCTTTCCTTGCGTGCACACGATCAGCT +
Preference number: 1 (lower is better)
Translates to: WRGSGQRCPGIPEPG*TLPPGSFLACTRSA
Trigger: AGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAGCCAGGCTCAGGGATCCCCGGACACCTCTGTCCAGAGCCCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR GCA 90 bp ACCAGGCGCCCCTTGCTGAGTTGGATGATGTACTCCTTCACCAGGTaGAGGTGCAAGGCCTCCATGAGCTCCTCCCGGAAACAGCCCTGC +
Preference number: 1 (lower is better)
Translates to: TRRPLLSWMMYSFTR*RCKASMSSSRKQPC
Trigger: GCAGGGCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR CCA 90 bp TGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTTaGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCCATG +
Preference number: 1 (lower is better)
Translates to: CCCSAVLRTRRPLLS*MMYSFTRCRCKASM
Trigger: CATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR GCA 90 bp GCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGTGGCTTCAGGTCCTCATGCAGGTTC +
Preference number: 1 (lower is better)
Translates to: AMMFSRVSTGAAQRV*VNLLNSGFRSSCRF
Trigger: GAACCTGCATGAGGACCTGAAGCCACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CCA 90 bp ACACACGTACAAAGACCTTGGGCATCCTTTATACCGGCCACTTCCTaGCCACAGCTTTGTAAGGCAGTACCTGGGAAAAGGGGACGGACC +
Preference number: 1 (lower is better)
Translates to: THVQRPWASFIPATS*PQLCKAVPGKRGRT
Trigger: GGTCCGTCCCCTTTTCCCAGGTACTGCCTTACAAAGCTGTGGCCAGGAAGTGGCCGGTATAAAGGATGCCCAAGGTCTTTGTACGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR GCA 90 bp ATCCCTGAGCCTGGCTGCACTCTCCCTCCTGGTTCTTTCCTTGCGTaGACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCT +
Preference number: 1 (lower is better)
Translates to: IPEPGCTLPPGSFLA*TRSAIVYKESLVLP
Trigger: AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAGCCAGGCTCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR TCA 90 bp CAGTGGGAACTAAAGTTGCAGATGGAACTAAGGTGGCTAATCAGCTaGCCTGAAAATAGAAAGACGACCTGGGTTCTCTGGGTAGGCGCA +
Preference number: 1 (lower is better)
Translates to: QWELKLQMELRWLIS*PENRKTTWVLWVGA
Trigger: TGCGCCTACCCAGAGAACCCAGGTCGTCTTTCTATTTTCAGGTCAGCTGATTAGCCACCTTAGTTCCATCTGCAACTTTAGTTCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR CCA 90 bp CTGACCCGCAGAACTGGAAGACCTCGTTTTGATCCACGAAGTTTGTaGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGG +
Preference number: 1 (lower is better)
Translates to: LTRRTGRPRFDPRSL*KPVTAIGNKYRGQR
Trigger: CCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGTGGATCAAAACGAGGTCTTCCAGTTCTGCGGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
3UTR CCA 90 bp TTAACAATATCAAACACGCTAACTCCTACACACGTACAAAGACCTTaGGCATCCTTTATACCGGCCACTTCCTGGCCACAGCTTTGTAAG +
Preference number: 1 (lower is better)
Translates to: LTISNTLTPTHVQRP*ASFIPATSWPQLCK
Trigger: CTTACAAAGCTGTGGCCAGGAAGTGGCCGGTATAAAGGATGCCCAAGGTCTTTGTACGTGTGTAGGAGTTAGCGTGTTTGATATTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR GCA 90 bp CAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCAATGTACCCAGCCAGCTaGTGCTGCTGCTCGGCCGTC +
Preference number: 2 (lower is better)
Translates to: QRRESRLQPGRRGAVLGAMYPAS*CCCSAV
Trigger: GACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACAT...TGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR-3UTR TCA 90 bp TTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGGCTGCTCGGCCGTCTTaGGGACCAGGCGCCCCTTGC +
Preference number: 2 (lower is better)
Translates to: FQGLHRGRPAGVREPLEQAARPS*GPGAPC
Trigger: GCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGC...CTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR-3UTR GCA 90 bp CTGCAGGCGAATGATCTCGGCCAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCGCTCCCAGCGGGGTGTaGCCAAGGCTTGCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: LQANDLGQRRESRLQPGRAPSGV*PRLAGH
Trigger: GTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGC...GCGACCTGGCTGCAGCCTGCTCTCCCTACGCTGGCCGAGATCATTCGCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR GCA 90 bp CTGCAGGCGAATGATCTCGGCCAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCCCAGCTGACAGGGCCTaGACCTCCGCCAGGGCTAGG +
Preference number: 2 (lower is better)
Translates to: LQANDLGQRRESRLQPGRPADRA*TSARAR
Trigger: CCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGG...GCGACCTGGCTGCAGCCTGCTCTCCCTACGCTGGCCGAGATCATTCGCCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CAA 90 bp GCCGGGGAGCCGTGCTGGGTGCAGAAGTGCTGGATGGTGTCAGCATaGGCCAGGATGTACCCAGCCAGCTGCTGCTGCTGCTCGGCCGTC +
Preference number: 2 (lower is better)
Translates to: AGEPCWVQKCWMVSA*ARMYPASCCCCSAV
Trigger: GACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACATCCTGGCCAATGCTGACACCATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR-3UTR TCA 90 bp AATAGGGGCCGGGAGGGCTCCTGCGCCCCCATGCTGACGTCCAAGATGCTCCGGAGCCCAAGTCCAGCGTaGTGCTCTCGGCCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: NRGREGSCAPMLTSKMLRSPSPA*CSRPWP
Trigger: AGGCCAAGGCCGAGAGCATCACGCTGGACTTGGGCT...CCGGAGCATCTTGGACGTCAGCATGGGGGCGCAGGAGCCCTCCCGGCCCCTATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR GCA 90 bp TTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGGCTCCCAGCGGGGTGTaGCCAAGGCTTGCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: FQGLHRGRPAGVREPLEQAPSGV*PRLAGH
Trigger: GTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGC...CTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR CCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAGCCGGGGAGCCGTGCTaGGTGCAGAAGTGCTGGATG +
Preference number: 2 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRAGEPC*VQKCWM
Trigger: CATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGC...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR-3UTR CCA 90 bp AGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTAGCTCGCTGTGGCAGTaGCCGTCCAGCCTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: SGDDVFQGLHRGRPAGVRSSLWQ*PSSLWG
Trigger: TCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCT...ACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CAA 90 bp AGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCTCTaGAGCTCACCCAGGGGGCCCAGCAGGAGGCTCAGGGTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: RSSCRFWSRVSKPWL*SSPRGPSRRLRVSW
Trigger: CCAGGACACCCTGAGCCTCCTGCTGGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR TCA 90 bp CCCCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGGAAGGGGGAGCCTaGGAGGACCCAGGAGGTCTT +
Preference number: 2 (lower is better)
Translates to: PLEPPEGVQDCRHPDLSPGEGGA*EDPGGL
Trigger: AAGACCTCCTGGGTCCTCTCAGGCTCCCCCTTCCCC...GGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
3UTR-3UTR TCA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGGGGGAAGGGGGAGCCTaGGAGGACCCAGGAGGTCTT +
Preference number: 2 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQGEGGA*EDPGGL
Trigger: AAGACCTCCTGGGTCCTCTCAGGCTCCCCCTTCCCC...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR GCA 90 bp AGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGTGGCTGTTGCCTGGTTGGCTaGCCAGGATGGGAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: RVSTGAAQRVCVNLLNSGCCLVG*PGWELL
Trigger: CAGGAGCTCCCATCCTGGGCAGCCAACCAGGCAACA...GCCACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR GCA 90 bp TTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGTACCCAGCCAGCTGCTaGTGCTGCTCGGCCGTCTTG +
Preference number: 2 (lower is better)
Translates to: FQGLHRGRPAGVREPLEQYPASC*CCSAVL
Trigger: CAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTA...CTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR-3UTR GCA 90 bp GATGGCACTGGGGTCCTGCAGGCGAATGATCTCGGCCAGCGTAGGGAGAGCAGGATGTACCCAGCCAGCTaGTGCTGCTGCTCGGCCGTC +
Preference number: 2 (lower is better)
Translates to: DGTGVLQANDLGQRRESRMYPAS*CCCSAV
Trigger: GACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACAT...CCTGCTCTCCCTACGCTGGCCGAGATCATTCGCCTGCAGGACCCCAGTGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR-3UTR GCA 90 bp CCTCGTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAG +
Preference number: 2 (lower is better)
Translates to: PRVYSGDDVFQGLHRGRPVGRAG*SQVAGE
Trigger: CTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTAC...TGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGACACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000559406.5
ENST00000560562.5
ENST00000561156.1
3UTR-3UTR CCA 90 bp CCAGCCTCTGGGGAGGCACATCCTCAGCCCAGCGCCGTGCCTCTAGCTCCAGAGTTGGTGTTGCCTGGTTaGCTGCCCAGGATGGGAGCT +
Preference number: 2 (lower is better)
Translates to: PASGEAHPQPSAVPLAPELVLPG*LPRMGA
Trigger: AGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAA...CTCTGGAGCTAGAGGCACGGCGCTGGGCTGAGGATGTGCCTCCCCAGAGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR-3UTR CCA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGAGCCAGACTTCTGGGTaGCAGGGCCCACGGTGGCAC +
Preference number: 2 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQSQTSG*QGPRWH
Trigger: GTGCCACCGTGGGCCCTGCCACCCAGAAGTCTGGCT...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR CCA 90 bp AGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGTCCCTCAGCCAGACTTCTaGGTGGCAGGGCCCACGGTG +
Preference number: 2 (lower is better)
Translates to: RASRRSAGLPTPRFEPRVPQPDF*VAGPTV
Trigger: CACCGTGGGCCCTGCCACCCAGAAGTCTGGCTGAGG...GACCCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
3UTR-3UTR CCA 90 bp GAACAGTGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCCACGGCGGCCAGGTaGGCCGCGAAGTGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: EQWLQVLMQVLEQGVKAVATAAR*AAKCWW
Trigger: CCACCAGCACTTCGCGGCCCACCTGGCCGCCGTGGC...CACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCACTGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR-3UTR CCA 90 bp AGGAACGCAGGCAGCTCCACCAGCAGCACCCGCTTTATCTGTGAGCCCAAGTCCGCAGTCGGATCTGCCTaGGGGGCAGGAGGCTCCCGA +
Preference number: 2 (lower is better)
Translates to: RNAGSSTSSTRFICEPKSAVGSA*GAGGSR
Trigger: TCGGGAGCCTCCTGCCCCCCAGGCAGATCCGACTGC...GGACTTGGGCTCACAGATAAAGCGGGTGCTGCTGGTGGAGCTGCCTGCGTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR-3UTR GCA 90 bp CCAGGTCGCCGGGGAGCCGTGCTGGGTGCAGAAGTGCTGGATGGTGTCAGCATTGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGT +
Preference number: 2 (lower is better)
Translates to: PGRRGAVLGAEVLDGVSIAAQRV*VNLLNS
Trigger: ACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGC...AATGCTGACACCATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGCGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR-3UTR GCA 90 bp CGCCCCTTGCTGAGTTGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCGCACAGCTCGAACTaGGCCACGGCGGCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: RPLLSWMMYSFTRCRCKASHSSN*ATAARW
Trigger: CCACCTGGCCGCCGTGGCGCAGTTCGAGCTGTGCGA...GGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR-3UTR CCA 90 bp AGGAACGCAGGCAGCTCCACCAGCAGCACCCGCTTTATCTGTGAGCCCAAGTCCCTCTCGGCCTTGGCCTaGGCCTGGGAGGTGATCTGG +
Preference number: 2 (lower is better)
Translates to: RNAGSSTSSTRFICEPKSLSALA*AWEVIW
Trigger: CCAGATCACCTCCCAGGCCCAGGCCAAGGCCGAGAG...GGACTTGGGCTCACAGATAAAGCGGGTGCTGCTGGTGGAGCTGCCTGCGTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CAA 90 bp GCCAGCTGCTGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTaGCTGAGTTGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAG +
Preference number: 2 (lower is better)
Translates to: ASCCCCSAVLRTRRP*LSWMMYSFTRCRCK
Trigger: CTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR-3UTR TCA 90 bp GGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACGTGTCCGGGGATCCCTaGGCCTGGCTGCACTCTCCC +
Preference number: 2 (lower is better)
Translates to: GGRQERGGLNEVTGKRFNVSGDP*AWLHSP
Trigger: GGGAGAGTGCAGCCAGGCTCAGGGATCCCCGGACAC...GTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR TCA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGGGCTGCAGTGAGCCTTaGTGCCATGACCAGGCCACT +
Preference number: 2 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQGCSEP*CHDQAT
Trigger: AGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCC...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR TCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTGGCTGCAGTGAGCCTTaGTGCCATGACCAGGCCACT +
Preference number: 2 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSGCSEP*CHDQAT
Trigger: AGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCC...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR GCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCACCCAGGGCCTGTCCCTaGCTTGGGGAAGGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPPRACP*LGEGGA
Trigger: GGCTCCCCCTTCCCCAAGGCAGGGACAGGCCCTGGG...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR GCA 90 bp ACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCTTCACCAGGTGCAGGTaGAAGGCCTCCATGAGCTCC +
Preference number: 2 (lower is better)
Translates to: TVAMMFSRVSTGAAQRVCFTRCR*KASMSS
Trigger: GGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAA...GCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR-3UTR GCA 90 bp AGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGTGGCTACTCCTTCACCAGGTaGAGGTGCAAGGCCTCCATG +
Preference number: 2 (lower is better)
Translates to: RVSTGAAQRVCVNLLNSGYSFTR*RCKASM
Trigger: CATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTA...GCCACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR-3UTR CCA 90 bp GAGGTCCAGGCTGCAGTGAGCCTTGATGCCATGACCAGGCCACTGCACTCCAGCGTGCCCAAGGCTTGCTaGGCACTCACAGGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: EVQAAVSLDAMTRPLHSSVPKAC*ALTGRS
Trigger: TGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCAC...GCTGGAGTGCAGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCCTGGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR CCA 90 bp AGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCAGTTTACAAAGAGTCCTTaGTGTTGCCTGGTTGGCTGC +
Preference number: 2 (lower is better)
Translates to: SVGRAGCSQVAGEPCWVQFTKSP*CCLVGC
Trigger: GCAGCCAACCAGGCAACACCAAGGACTCTTTGTAAA...CTGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR-3UTR CCA 90 bp GTACCCAGCCAGCTGCTGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGAACCTCTTGAACAGTaGCTGAGACAGGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: VPSQLLLLLGRLEDQAPLEPLEQ*LRQERQ
Trigger: CTGCCTCTCCTGTCTCAGCCACTGTTCAAGAGGTTC...AAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561156.1
3UTR-3UTR CCA 90 bp AATAGGGGCCGGGAGGGCTCCTGCGCCCCCATGCTGACGTCCAAGATGCTCCGGCGCCCCTTGCTGAGTTaGATGATGTACTCCTTCACC +
Preference number: 2 (lower is better)
Translates to: NRGREGSCAPMLTSKMLRRPLLS*MMYSFT
Trigger: GGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCG...CCGGAGCATCTTGGACGTCAGCATGGGGGCGCAGGAGCCCTCCCGGCCCCTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR CAA 90 bp CTGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTaGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCCAT +
Preference number: 2 (lower is better)
Translates to: LLLLGRLEDQAPLAE*DDVLLHQVQVQGLH
Trigger: ATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR CAA 90 bp ACCCGCTTTATCTGTGAGCCCAAGTCCAGCGTGATGCTCTCGGCCTaGGCCTGGGCCTGGGAGGTGATCTGGATGATGTCGATGGCCAGC +
Preference number: 2 (lower is better)
Translates to: TRFICEPKSSVMLSA*AWAWEVIWMMSMAS
Trigger: GCTGGCCATCGACATCATCCAGATCACCTCCCAGGCCCAGGCCAAGGCCGAGAGCATCACGCTGGACTTGGGCTCACAGATAAAGCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CAA 90 bp GGCTCCTGCGCCCCCATGCTGACGTCCAAGATGCTCCGGATGCGCTaGACCTCACTGTTGGATAGGTTCCCCTTGATGGCCAGGATAGCG +
Preference number: 2 (lower is better)
Translates to: GSCAPMLTSKMLRMR*TSLLDRFPLMARIA
Trigger: CGCTATCCTGGCCATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCATCTTGGACGTCAGCATGGGGGCGCAGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR TCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTGTGTCCGGGGATCCCTaGGCCTGGCTGCACTCTCCC +
Preference number: 2 (lower is better)
Translates to: RSRALGGAHAEQENELTFVSGDP*AWLHSP
Trigger: GGGAGAGTGCAGCCAGGCTCAGGGATCCCCGGACAC...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR TCA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGTCAGGTGGCCTTTGCTaGAGTCAGGGTAGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: RNREPALLLTAPSGVCPRSGGLC*SQGSRW
Trigger: CCACCTGCTACCCTGACTTCAGCAAAGGCCACCTGA...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR GCA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCAAAGAGTCCTTGGTGTTaGCTGGTTGGCTGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: TSAALNSSQRGVPKACWAKSPWC*LVGCPG
Trigger: TCCTGGGCAGCCAACCAGGCAACACCAAGGACTCTT...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
3UTR-3UTR GCA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGATCCCTGAGCCTGGCTaGACTCTCCCTCCTGGTTCT +
Preference number: 2 (lower is better)
Translates to: RNREPALLLTAPSGVCPRIPEPG*TLPPGS
Trigger: AGAACCAGGAGGGAGAGTGCAGCCAGGCTCAGGGAT...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR GCA 90 bp CTTGATGGCCAGGATAGCGCTCAGGTGGCCTTTGCTGAAGTCAGGGTAGCAGGTGCCAGCTGCTGCTGCTaGTCGGCCGTCTTGAGGACC +
Preference number: 2 (lower is better)
Translates to: LDGQDSAQVAFAEVRVAGASCCC*SAVLRT
Trigger: GGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGC...ACCTGCTACCCTGACTTCAGCAAAGGCCACCTGAGCGCTATCCTGGCCATCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR-3UTR GCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAGTGTCCTGGGGTACCTaGCAATTCTGCTCCATGGAC +
Preference number: 2 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRVSWGT*QFCSMD
Trigger: GTCCATGGAGCAGAATTGGCAGGTACCCCAGGACAC...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR GCA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGGGCTTCAGGTCCTCATaGAGGTTCTGGAGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQGFRSS*RFWSRV
Trigger: CACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCC...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR CCA 90 bp ACCAGCAGCACCCGCTTTATCTGTGAGCCCAAGTCCAGCGTGATGCTCTCGGCCGTGCCCAAGGCTTGCTaGGCACTCACAGGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: TSSTRFICEPKSSVMLSAVPKAC*ALTGRS
Trigger: TGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCAC...GGCCGAGAGCATCACGCTGGACTTGGGCTCACAGATAAAGCGGGTGCTGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR CCA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGTTGGTGTTGCCTGGTTaGCTGCCCAGGATGGGAGCT +
Preference number: 2 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQLVLPG*LPRMGA
Trigger: AGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAA...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
3UTR-3UTR CCA 90 bp CCCCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCTTGGTGTTGCCTGGTTaGCTGCCCAGGATGGGAGCT +
Preference number: 2 (lower is better)
Translates to: PLEPPEGVQDCRHPDLSPLVLPG*LPRMGA
Trigger: AGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAA...GGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR TCA 90 bp GTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGCTCTTGAACAGTGGCTaGGACAGGAGAGGCAGGATG +
Preference number: 2 (lower is better)
Translates to: VSTVAMMFSRVSTGAAQRLLNSG*DRRGRM
Trigger: CATCCTGCCTCTCCTGTCTCAGCCACTGTTCAAGAG...CCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561156.1
3UTR-3UTR TCA 90 bp GAACAGTGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGGTGCAAGGCCTCCATaGGCTCCTCCCGGAAACAGC +
Preference number: 2 (lower is better)
Translates to: EQWLQVLMQVLEQGVKAVGARPP*APPGNS
Trigger: GCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACC...CACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCACTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR-3UTR TCA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCACCCGCTTTATCTGTaGGCCCAAGTCCAGCGTGAT +
Preference number: 2 (lower is better)
Translates to: RNREPALLLTAPSGVCPRHPLYL*AQVQRD
Trigger: ATCACGCTGGACTTGGGCTCACAGATAAAGCGGGTG...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR GCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTGCTCCCAGCGGGGTGTaGCCAAGGCTTGCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPAAPSGV*PRLAGH
Trigger: GTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGC...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
3UTR-3UTR GCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAAGAGTCCTTGGTGTTaGCTGGTTGGCTGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSKSPWC*LVGCPG
Trigger: TCCTGGGCAGCCAACCAGGCAACACCAAGGACTCTT...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
3UTR-3UTR GCA 90 bp CTCGGCCCCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGGTTCTTTCCTTGCGTaGACACGATCAGCTATCGTT +
Preference number: 2 (lower is better)
Translates to: LGPTHEEDSHEADCGGALGSFLA*TRSAIV
Trigger: AACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC...CAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR CCA 90 bp GCAGGTGGCATAAGTGGCCACCTCAATCTTGATGGCACTGGGGTCCTGCAGGCGTTGGTGTTGCCTGGTTaGCTGCCCAGGATGGGAGCT +
Preference number: 2 (lower is better)
Translates to: AGGISGHLNLDGTGVLQALVLPG*LPRMGA
Trigger: AGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAA...CGCCTGCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCACTTATGCCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR CCA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGTCCTCATGCAGGTTCTaGAGCAGGGTGTCAAAGCCG +
Preference number: 2 (lower is better)
Translates to: RNREPALLLTAPSGVCPRSSCRF*SRVSKP
Trigger: CGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGA...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CAA 90 bp CTGGGCGTGGGGGATTGTCTCAGGGGACTGAGACAAGAGGATCACTaGAACCAGGAGGTCCAGGCTGCAGTGAGCCTTGATGCCATGACC +
Preference number: 2 (lower is better)
Translates to: LGVGDCLRGLRQEDH*NQEVQAAVSLDAMT
Trigger: GGTCATGGCATCAAGGCTCACTGCAGCCTGGACCTCCTGGTTCAAGTGATCCTCTTGTCTCAGTCCCCTGAGACAATCCCCCACGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
3UTR CAA 90 bp CCCATGCTGACGTCCAAGATGCTCCGGATGCGCTTGACCTCACTGTaGGATAGGTTCCCCTTGATGGCCAGGATAGCGCTCAGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: PMLTSKMLRMRLTSL*DRFPLMARIALRWP
Trigger: AGGCCACCTGAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCATCTTGGACGTCAGCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR TCA 90 bp AGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACCCACTGTCTCCAGAGAGCTaGAGAGGGCCCTCGGCCCCA +
Preference number: 2 (lower is better)
Translates to: RQERGGLNEVTGKRFNYPLSPES*RGPSAP
Trigger: TGGGGCCGAGGGCCCTCTTCAGCTCTCTGGAGACAG...TGGGTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR TCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTGGGGCCACCTGGATGTaGCGTCTAATGCTGGCGGTG +
Preference number: 2 (lower is better)
Translates to: RSRALGGAHAEQENELTFGATWM*RLMLAV
Trigger: CACCGCCAGCATTAGACGTCACATCCAGGTGGCCCC...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR TCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAAGCCCAAGTCCAGCGTaGTGCTCTCGGCCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPSPSPA*CSRPWP
Trigger: AGGCCAAGGCCGAGAGCATCACGCTGGACTTGGGCT...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR GCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTAGGTCAAGCTTGCCCTaGCCCTGCCCAGACCTCAGC +
Preference number: 2 (lower is better)
Translates to: RSRALGGAHAEQENELTFRSSLP*PCPDLS
Trigger: GCTGAGGTCTGGGCAGGGGCAGGGCAAGCTTGACCT...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR GCA 90 bp CTTGATGGCCAGGATAGCGCTCAGGTGGCCTTTGCTGAAGTCAGGGTAGCAGGTGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGT +
Preference number: 2 (lower is better)
Translates to: LDGQDSAQVAFAEVRVAGAAQRV*VNLLNS
Trigger: ACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGC...ACCTGCTACCCTGACTTCAGCAAAGGCCACCTGAGCGCTATCCTGGCCATCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR GCA 90 bp GCAGGTGGCATAAGTGGCCACCTCAATCTTGATGGCACTGGGGTCCTGCAGGCGTACTCCTTCACCAGGTaGAGGTGCAAGGCCTCCATG +
Preference number: 2 (lower is better)
Translates to: AGGISGHLNLDGTGVLQAYSFTR*RCKASM
Trigger: CATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTA...CGCCTGCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCACTTATGCCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR-3UTR CCA 90 bp AGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGTGGCTTTACAAAGAGTCCTTaGTGTTGCCTGGTTGGCTGC +
Preference number: 2 (lower is better)
Translates to: RVSTGAAQRVCVNLLNSGFTKSP*CCLVGC
Trigger: GCAGCCAACCAGGCAACACCAAGGACTCTTTGTAAA...GCCACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR GCA 90 bp CTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCTCTTGAGCTCACCCAGCAGGATGGGAGCTCCTaGCCCCATCGGACATGTAAA +
Preference number: 2 (lower is better)
Translates to: LMQVLEQGVKAVALELTQQDGSS*PHRTCK
Trigger: TTTACATGTCCGATGGGGGCAGGAGCTCCCATCCTG...CTGGGTGAGCTCAAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR CCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGTGCCCAAGGCTTGCTaGGCACTCACAGGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPVPKAC*ALTGRS
Trigger: TGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCAC...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
3UTR-3UTR CCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTGTGCCCAAGGCTTGCTaGGCACTCACAGGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: RSRALGGAHAEQENELTFVPKAC*ALTGRS
Trigger: TGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCAC...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR CAA 90 bp AAGATGCTCCGGATGCGCTTGACCTCACTGTTGGATAGGTTCCCCTaGATGGCCAGGATAGCGCTCAGGTGGCCTTTGCTGAAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: KMLRMRLTSLLDRFP*MARIALRWPLLKSG
Trigger: CCCTGACTTCAGCAAAGGCCACCTGAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR GCA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTCCAGCTGACAGGGCCTaGACCTCCGCCAGGGCTAGG +
Preference number: 2 (lower is better)
Translates to: FLACTRSAIVYKESLVLPPADRA*TSARAR
Trigger: CCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGG...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
3UTR-3UTR GCA 90 bp GGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACCAGGATGGGAGCTCCTaGCCCCATCGGACATGTAAA +
Preference number: 2 (lower is better)
Translates to: GGRQERGGLNEVTGKRFNQDGSS*PHRTCK
Trigger: TTTACATGTCCGATGGGGGCAGGAGCTCCCATCCTG...GTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR GCA 90 bp TGCAGCTCTGAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTTCCGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGT +
Preference number: 2 (lower is better)
Translates to: CSSENSGSLVSTVAMMFSAAQRV*VNLLNS
Trigger: ACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGC...GGAAAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTCAGAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559406.5
ENST00000560562.5
ENST00000561156.1
3UTR-3UTR CCA 90 bp GGGCGTGGGGGATTGTCTCAGGGGACTGAGACAAGAGGATCACTTGAACCAGGACTGCACTCTCCCTCCTaGTTCTTTCCTTGCGTGCAC +
Preference number: 2 (lower is better)
Translates to: GRGGLSQGTETRGSLEPGLHSPS*FFPCVH
Trigger: GTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAG...TCCTGGTTCAAGTGATCCTCTTGTCTCAGTCCCCTGAGACAATCCCCCACGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR CAA 90 bp CGGGGATCCCTGAGCCTGGCTGCACTCTCCCTCCTGGTTCTTTCCTaGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: RGSLSLAALSLLVLS*RAHDQLSFTKSPWC
Trigger: ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAGCCAGGCTCAGGGATCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR GCA 90 bp CGGCCTCCCAAAGATGTCCACGTGACAGTCCCCAGAGCCTGTGACTATGTTAGGGACCCTAAAAGCCCCTaGCAGACGAGAGCTCATCTT +
Preference number: 2 (lower is better)
Translates to: RPPKDVHVTVPRACDYVRDPKSP*QTRAHL
Trigger: AAGATGAGCTCTCGTCTGGCAGGGGCTTTTAGGGTC...CCTAACATAGTCACAGGCTCTGGGGACTGTCACGTGGACATCTTTGGGAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR TCA 90 bp GGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGACCCACAGCTGGCTCTaGAGATGGAGGAGCCTGAAG +
Preference number: 2 (lower is better)
Translates to: GSFLACTRSAIVYKESLVTHSWL*RWRSLK
Trigger: CTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGGGT...CACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR CCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTGTGCCCAAGGCTTGCTaGGCACTCACAGGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCVPKAC*ALTGRS
Trigger: TGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCAC...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
3UTR-3UTR CCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTTTTACAAAGAGTCCTTaGTGTTGCCTGGTTGGCTGC +
Preference number: 2 (lower is better)
Translates to: RSRALGGAHAEQENELTFFTKSP*CCLVGC
Trigger: GCAGCCAACCAGGCAACACCAAGGACTCTTTGTAAA...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR TCA 90 bp GAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAAGGCCAGAAATGCCATTCCACCATTGCTaGATCCCGCTCACGGCGGCC +
Preference number: 2 (lower is better)
Translates to: EPEVKNYGQPLKMKRPEMPFHHC*IPLTAA
Trigger: GGCCGCCGTGAGCGGGATTCAGCAATGGTGGAATGG...CATTTCTGGCCTTTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR GCA 90 bp GGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGAAGAGTCCTTGGTGTTaGCTGGTTGGCTGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: GSFLACTRSAIVYKESLVKSPWC*LVGCPG
Trigger: TCCTGGGCAGCCAACCAGGCAACACCAAGGACTCTT...CACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
3UTR-3UTR CCA 90 bp TCCACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCACTGCACTCTCCCTCCTaGTTCTTTCCTTGCGTGCAC +
Preference number: 2 (lower is better)
Translates to: STKFVETCHGNRKQIQRPLHSPS*FFPCVH
Trigger: GTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAG...TGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR CAA 90 bp CTTCTGACCCGCAGAACTGGAAGACCTCGTTTTGATCCACGAAGTTaGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAA +
Preference number: 2 (lower is better)
Translates to: LLTRRTGRPRFDPRS*WKPVTAIGNKYRGQ
Trigger: TTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGTGGATCAAAACGAGGTCTTCCAGTTCTGCGGGTCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
3UTR-3UTR GCA 90 bp TCCACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCATCCTGGTTCTTTCCTTaGGTGCACACGATCAGCTAT +
Preference number: 2 (lower is better)
Translates to: STKFVETCHGNRKQIQRPSWFFP*VHTISY
Trigger: ATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGA...TGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR GCA 72 bp AGGCGAATGATCTCGGCCAGCGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCAG +
Preference number: 3 (lower is better)
Translates to: RRMISASVGRAG*SQVAGEPCWVQ
Trigger: CTGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCTGGCCGAGATCATTCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR CCA 72 bp ATGGCCAGCTCGCTGTGGCAGTGGCCGTCCAGCCTCTaGGGAGGCACATCCTCAGCCCAGCGCCGTGCCTCT +
Preference number: 3 (lower is better)
Translates to: MASSLWQWPSSL*GGTSSAQRRAS
Trigger: AGAGGCACGGCGCTGGGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCTGGCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR TCA 72 bp GAGGGCCCTCGGCCCCACCCACGAGGAGGACAGTCATaGGGCCGACTGTGGAGGGGCTCTGGACAGAGGTGT +
Preference number: 3 (lower is better)
Translates to: EGPRPHPRGGQS*GRLWRGSGQRC
Trigger: ACACCTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAGGGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR TCA 72 bp CAGATGGGTGAGGCTCGGCCCCTGTCTCCAGAGAGCTaGAGAGGGCCCTCGGCCCCACCCACGAGGAGGACA +
Preference number: 3 (lower is better)
Translates to: QMGEARPLSPES*RGPSAPPTRRT
Trigger: TGTCCTCCTCGTGGGTGGGGCCGAGGGCCCTCTTCAGCTCTCTGGAGACAGGGGCCGAGCCTCACCCATCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR GCA 72 bp AGGCGAATGATCTCGGCCAGCGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAGCCCTCCCGGAAACAG +
Preference number: 3 (lower is better)
Translates to: RRMISASVGRAG*SQVAGEPSRKQ
Trigger: CTGTTTCCGGGAGGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCTGGCCGAGATCATTCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560562.5
3UTR CCA 72 bp CATTCCACCATTGCTGAATCCCGCTCACGGCGGCCCTaGGCTGCAGAGGGCAGATGGGTGAGGCTCGGCCCC +
Preference number: 3 (lower is better)
Translates to: HSTIAESRSRRP*AAEGRWVRLGP
Trigger: GGGGCCGAGCCTCACCCATCTGCCCTCTGCAGCCCAGGGCCGCCGTGAGCGGGATTCAGCAATGGTGGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR GCA 72 bp GTGTCAGCATTGGCCAGGATGTACCCAGCCAGCTGCTaGTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCC +
Preference number: 3 (lower is better)
Translates to: VSALARMYPASC*CCSAVLRTRRP
Trigger: GGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACATCCTGGCCAATGCTGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR CCA 72 bp TGGACAGGAATGTGGCCTCCAGCAGTCGGATCTGCCTaGGGGGCAGGAGGCTCCCGAGCCCCATACCCTGCA +
Preference number: 3 (lower is better)
Translates to: WTGMWPPAVGSA*GAGGSRAPYPA
Trigger: TGCAGGGTATGGGGCTCGGGAGCCTCCTGCCCCCCAGGCAGATCCGACTGCTGGAGGCCACATTCCTGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR-3UTR CAA 90 bp GGTAGAGCGAGGTGCCCGGCAGGGCAGGGGATGAACGGAGGGTGCGGTGGGCAGTCTTCCATTCCACCATaGCTGAATCCCGCTCACGGC +
Preference number: 3 (lower is better)
Translates to: GRARCPAGQGMNGGCGGQSSIPP*LNPAHG
Trigger: GCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGA...CTGCCCACCGCACCCTCCGTTCATCCCCTGCCCTGCCGGGCACCTCGCTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR GCA 72 bp TCAGCATTGGCCAGGATGTACCCAGCCAGCTGCTGCTaGTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTG +
Preference number: 3 (lower is better)
Translates to: SALARMYPASCC*CSAVLRTRRPL
Trigger: CAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACATCCTGGCCAATGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR CCA 72 bp CAGGTCGCCGGGGAGCCGTGCTGGGTGCAGAAGTGCTaGATGGTGTCAGCATTGGCCAGGATGTACCCAGCC +
Preference number: 3 (lower is better)
Translates to: QVAGEPCWVQKC*MVSALARMYPA
Trigger: GGCTGGGTACATCCTGGCCAATGCTGACACCATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGCGACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR TCA 72 bp CGCAGGCAGCTCCACCAGCAGCACCCGCTTTATCTGTaGGCCCAAGTCCAGCGTGATGCTCTCGGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: RRQLHQQHPLYL*AQVQRDALGLG
Trigger: GCCAAGGCCGAGAGCATCACGCTGGACTTGGGCTCACAGATAAAGCGGGTGCTGCTGGTGGAGCTGCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CCA 72 bp ATCTGGATGATGTCGATGGCCAGCTCGCTGTGGCAGTaGCCGTCCAGCCTCTGGGGAGGCACATCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: IWMMSMASSLWQ*PSSLWGGTSSA
Trigger: GGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCTGGCCATCGACATCATCCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR CCA 72 bp GAGGTGATCTGGATGATGTCGATGGCCAGCTCGCTGTaGCAGTGGCCGTCCAGCCTCTGGGGAGGCACATCC +
Preference number: 3 (lower is better)
Translates to: EVIWMMSMASSL*QWPSSLWGGTS
Trigger: GGATGTGCCTCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCTGGCCATCGACATCATCCAGATCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CCA 72 bp GAGCCCAAGTCCAGCGTGATGCTCTCGGCCTTGGCCTaGGCCTGGGAGGTGATCTGGATGATGTCGATGGCC +
Preference number: 3 (lower is better)
Translates to: EPKSSVMLSALA*AWEVIWMMSMA
Trigger: GGCCATCGACATCATCCAGATCACCTCCCAGGCCCAGGCCAAGGCCGAGAGCATCACGCTGGACTTGGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CCA 72 bp TCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTaGCTCTTGAGCTCACCCAGGGGGCCCAGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: SSCRFWSRVSKP*LLSSPRGPSRR
Trigger: CCTCCTGCTGGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR CAA 90 bp CCCCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCAGTGAGAGGTCAAGCTaGCCCTGCCCCTGCCCAGAC +
Preference number: 3 (lower is better)
Translates to: PLEPPEGVQDCRHPDLSPSERSS*PCPCPD
Trigger: GTCTGGGCAGGGGCAGGGCAAGCTTGACCTCTCACT...GGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
3UTR-3UTR CAA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGGCTGGGCGTGGGGGATaGTCTCAGGGGACTGAGACA +
Preference number: 3 (lower is better)
Translates to: RNREPALLLTAPSGVCPRAGRGG*SQGTET
Trigger: TGTCTCAGTCCCCTGAGACAATCCCCCACGCCCAGC...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR CAA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGAGGACCCAGGAGGTCTaGGGCCCTTCGGTAGTAGAC +
Preference number: 3 (lower is better)
Translates to: RNREPALLLTAPSGVCPRRTQEV*GPSVVD
Trigger: GTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR CAA 90 bp AGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGTCAGGACCCAGGAGGTCTaGGGCCCTTCGGTAGTAGAC +
Preference number: 3 (lower is better)
Translates to: RASRRSAGLPTPRFEPRVRTQEV*GPSVVD
Trigger: GTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT...GACCCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
3UTR-3UTR CAA 90 bp TTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGTGGATGGTGTCAGCATaGGCCAGGATGTACCCAGCC +
Preference number: 3 (lower is better)
Translates to: FQGLHRGRPAGVREPLEQWMVSA*ARMYPA
Trigger: GGCTGGGTACATCCTGGCCAATGCTGACACCATCCA...CTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR TCA 72 bp CTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTaGGCCCCGGGTCAGCCTTCTGACCCGCAGAACTGG +
Preference number: 3 (lower is better)
Translates to: LQKECRTADTQI*APGQPSDPQNW
Trigger: CCAGTTCTGCGGGTCAGAAGGCTGACCCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
3UTR TCA 72 bp GAGTCATGCCTGAGTCCGAAGGGCCCCCTCTCAGGCTaGGAAGGAACTTTCAGGCCCAGGGAGGAGCAGAGC +
Preference number: 3 (lower is better)
Translates to: ESCLSPKGPLSG*EGTFRPREEQS
Trigger: GCTCTGCTCCTCCCTGGGCCTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCCCTTCGGACTCAGGCATGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR TCA 72 bp AGCACTGCAGAGGCATCAGCCGGGCTGAGTCATGCCTaGGTCCGAAGGGCCCCCTCTCAGGCTGAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: STAEASAGLSHA*VRRAPSQAEKE
Trigger: TTCCTTCTCAGCCTGAGAGGGGGCCCTTCGGACTCAGGCATGACTCAGCCCGGCTGATGCCTCTGCAGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR CAA 90 bp CCAGGTCGCCGGGGAGCCGTGCTGGGTGCAGAAGTGCTGGATGGTGTCAGCATTGCGCCCCTTGCTGAGTaGGATGATGTACTCCTTCAC +
Preference number: 3 (lower is better)
Translates to: PGRRGAVLGAEVLDGVSIAPLAE*DDVLLH
Trigger: GTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGC...AATGCTGACACCATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGCGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR TCA 72 bp CTGAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATaGTGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGC +
Preference number: 3 (lower is better)
Translates to: LRTQAASCLQWR*CFPGSPQGPPS
Trigger: GCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559406.5
ENST00000560562.5
ENST00000561156.1
3UTR GCA 72 bp TCTGGACAGAGGTGTCCGGGGATCCCTGAGCCTGGCTaGACTCTCCCTCCTGGTTCTTTCCTTGCGTGCACA +
Preference number: 3 (lower is better)
Translates to: SGQRCPGIPEPG*TLPPGSFLACT
Trigger: TGTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAGCCAGGCTCAGGGATCCCCGGACACCTCTGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR GCA 72 bp TTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGTGGCTTCAGGTCCTCA +
Preference number: 3 (lower is better)
Translates to: FSRVSTGAAQRV*VNLLNSGFRSS
Trigger: TGAGGACCTGAAGCCACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR CAA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGTCTTCCATTCCACCATaGCTGAATCCCGCTCACGGC +
Preference number: 3 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQSSIPP*LNPAHG
Trigger: GCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGA...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR CAA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTTTGGATAGGTTCCCCTaGATGGCCAGGATAGCGCTC +
Preference number: 3 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSLDRFP*MARIAL
Trigger: GAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAA...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR CAA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGATGCTCCGGATGCGCTaGACCTCACTGTTGGATAGG +
Preference number: 3 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQMLRMR*TSLLDR
Trigger: CCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCAT...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CCA 72 bp TCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTTaGATGATGTACTCCTTCACCAGGTGCAGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: SAVLRTRRPLLS*MMYSFTRCRCK
Trigger: CTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR-3UTR CAA 90 bp GGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGTGGCTTGTTTACAAAGAGTCCTaGGTGTTGCCTGGTTGGCTG +
Preference number: 3 (lower is better)
Translates to: GLHRGRPAGVREPLEQWLVYKES*VLPGWL
Trigger: CAGCCAACCAGGCAACACCAAGGACTCTTTGTAAAC...AAGCCACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR CAA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCAGTTTACAAAGAGTCCTaGGTGTTGCCTGGTTGGCTG +
Preference number: 3 (lower is better)
Translates to: TSAALNSSQRGVPKACWAVYKES*VLPGWL
Trigger: CAGCCAACCAGGCAACACCAAGGACTCTTTGTAAAC...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
3UTR-3UTR CAA 90 bp AGGGTGTCCTGGGGTACCTGCCAATTCTGCTCCATGGACATCCGGAAGGACAGGAGGACCAGGCGCCCCTaGCTGAGTTGGATGATGTAC +
Preference number: 3 (lower is better)
Translates to: RVSWGTCQFCSMDIRKDRRTRRP*LSWMMY
Trigger: GTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCT...CCTGTCCTTCCGGATGTCCATGGAGCAGAATTGGCAGGTACCCCAGGACACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559406.5
3UTR-3UTR CAA 90 bp CCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGTTTACAAAGAGTCCTaGGTGTTGCCTGGTTGGCTG +
Preference number: 3 (lower is better)
Translates to: PRASRRSAGLPTPRFEPRVYKES*VLPGWL
Trigger: CAGCCAACCAGGCAACACCAAGGACTCTTTGTAAAC...CCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR TCA 72 bp TTTCTCTTCCAGTTCTGTCTTCCATTCCACCATTGCTaGATCCCGCTCACGGCGGCCCTGGGCTGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: FLFQFCLPFHHC*IPLTAALGCRG
Trigger: CCCTCTGCAGCCCAGGGCCGCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGACAGAACTGGAAGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR TCA 72 bp GTGGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTaGCGGGAAAAAGATTCAACTACCCACAGCTGGCTC +
Preference number: 3 (lower is better)
Translates to: VEGGRRGEASMR*REKDSTTHSWL
Trigger: GAGCCAGCTGTGGGTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
3UTR GCA 72 bp CTGAGTTGGATGATGTACTCCTTCACCAGGTGCAGGTaGAAGGCCTCCATGAGCTCCTCCCGGAAACAGCCC +
Preference number: 3 (lower is better)
Translates to: LSWMMYSFTRCR*KASMSSSRKQP
Trigger: GGGCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR GCA 72 bp CACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTaGCTGGTTGGCTGCCCAGGATGGGAGCTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: HDQLSFTKSPWC*LVGCPGWELLP
Trigger: GGGCAGGAGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
3UTR GCA 72 bp CCCTTGCTGAGTTGGATGATGTACTCCTTCACCAGGTaGAGGTGCAAGGCCTCCATGAGCTCCTCCCGGAAA +
Preference number: 3 (lower is better)
Translates to: PLLSWMMYSFTR*RCKASMSSSRK
Trigger: TTTCCGGGAGGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR-3UTR CAA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAAGGACAGGCAGTTGTaGATGTTGGCAATAACATTG +
Preference number: 3 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRKDRQL*MLAITL
Trigger: CAATGTTATTGCCAACATCAACAACTGCCTGTCCTT...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR-3UTR CAA 90 bp ACGTACAAAGACCTTGGGCATCCTTTATACCGGCCACTTCCTGGCCACAGCTTTAGGCTACAAGATCCCTaGAGCCCAGGAGTTCCAGAC +
Preference number: 3 (lower is better)
Translates to: TYKDLGHPLYRPLPGHSFRLQDP*SPGVPD
Trigger: GTCTGGAACTCCTGGGCTCAAGGGATCTTGTAGCCT...AAAGCTGTGGCCAGGAAGTGGCCGGTATAAAGGATGCCCAAGGTCTTTGTACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR-3UTR CAA 90 bp CCCTGCAGCTCTGAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTAGGCAGTTGTTGATGTaGGCAATAACATTGGCCCTG +
Preference number: 3 (lower is better)
Translates to: PCSSENSGSLVSTVAMMFRQLLM*AITLAL
Trigger: CAGGGCCAATGTTATTGCCAACATCAACAACTGCCT...AAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTCAGAGCTGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
3UTR CCA 72 bp TCAAACACGCTAACTCCTACACACGTACAAAGACCTTaGGCATCCTTTATACCGGCCACTTCCTGGCCACAG +
Preference number: 3 (lower is better)
Translates to: SNTLTPTHVQRP*ASFIPATSWPQ
Trigger: CTGTGGCCAGGAAGTGGCCGGTATAAAGGATGCCCAAGGTCTTTGTACGTGTGTAGGAGTTAGCGTGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR TCA 72 bp CAACTACCCACAGCTGGCTCTGAAGATGGAGGAGCCTaGAGTCAAGAATTACGGTCAGCCTCTAAAAATGAA +
Preference number: 3 (lower is better)
Translates to: QLPTAGSEDGGA*SQELRSASKNE
Trigger: TTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGGGTAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
3UTR TCA 72 bp CTAAAGTTGCAGATGGAACTAAGGTGGCTAATCAGCTaGCCTGAAAATAGAAAGACGACCTGGGTTCTCTGG +
Preference number: 3 (lower is better)
Translates to: LKLQMELRWLIS*PENRKTTWVLW
Trigger: CCAGAGAACCCAGGTCGTCTTTCTATTTTCAGGTCAGCTGATTAGCCACCTTAGTTCCATCTGCAACTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GTAGGCCGCCACGACGCCGAACTCGGCGGGGAACAGCGGCTTCAGCCGCTCCACGCCACGGCGGCCAGGTaGGCCGCGAAGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VGRHDAELGGEQRLQPLHATAAR*AAKCWW
Trigger: CCACCAGCACTTCGCGGCCCACCTGGCCGCCGTGGC...GTGGAGCGGCTGAAGCCGCTGTTCCCCGCCGAGTTCGGCGTCGTGGCGGCCTAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR GCA 90 bp GCCACGACGCCGAACTCGGCGGGGAACAGCGGCTTCAGCCGCTCCACCACGGCCGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: ATTPNSAGNSGFSRSTTAVGRAG*SQVAGE
Trigger: CTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTAC...GGCCGTGGTGGAGCGGCTGAAGCCGCTGTTCCCCGCCGAGTTCGGCGTCGTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR GCA 90 bp GGTAGAGCGAGGTGCCCGGCAGGGCAGGGGATGAACGGAGGGTGCGGTGGGCAGGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRARCPAGQGMNGGCGGQVGRAG*SQVAGE
Trigger: CTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTAC...CTGCCCACCGCACCCTCCGTTCATCCCCTGCCCTGCCGGGCACCTCGCTCTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp CTCGGCCCCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGGCCGGGAGGGCTCCTaGGCCCCCATGCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: LGPTHEEDSHEADCGGALGREGS*APMLTS
Trigger: GGACGTCAGCATGGGGGCGCAGGAGCCCTCCCGGCC...CAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GGTAGAGCGAGGTGCCCGGCAGGGCAGGGGATGAACGGAGGGTGCGGTGGGCAGAGGCCTGCAGGCTCCTaGCTCGCCTTCCCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRARCPAGQGMNGGCGGQRPAGS*LAFPVR
Trigger: CCTGACGGGGAAGGCGAGCCAGGAGCCTGCAGGCCT...CTGCCCACCGCACCCTCCGTTCATCCCCTGCCCTGCCGGGCACCTCGCTCTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCACAAAGCCGTGGCTCTTaGGCTCACCCAGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QRRESRLQPGRRGAVLGAQSRGS*AHPGGP
Trigger: TGGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTG...TGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR TCA 90 bp GGTAGAGCGAGGTGCCCGGCAGGGCAGGGGATGAACGGAGGGTGCGGTGGGCAGCTGTCTCCAGAGAGCTaGAGAGGGCCCTCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GRARCPAGQGMNGGCGGQLSPES*RGPSAP
Trigger: TGGGGCCGAGGGCCCTCTTCAGCTCTCTGGAGACAG...CTGCCCACCGCACCCTCCGTTCATCCCCTGCCCTGCCGGGCACCTCGCTCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GGTAGAGCGAGGTGCCCGGCAGGGCAGGGGATGAACGGAGGGTGCGGTGGGCAGAGCACGCCCAGCACCTaGTCGCGCAGCAGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GRARCPAGQGMNGGCGGQSTPST*SRSSSY
Trigger: GTACGAGCTGCTGCGCGACCAGGTGCTGGGCGTGCT...CTGCCCACCGCACCCTCCGTTCATCCCCTGCCCTGCCGGGCACCTCGCTCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGACAGAGGCACCCATCCCCCGATaGGGACACCCGGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: PPTRRTVMRPTVEGLWTEAPIPR*GHPGTG
Trigger: GCCCGTGCCCGGGTGTCCTCATCGGGGGATGGGTGC...CTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCAGGTGCAAGGCCTCCATaGGCTCCTCCCGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: QRRESRLQPGRRGAVLGAGARPP*APPGNS
Trigger: GCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACC...TGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp CAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACCACCCTCGGTCCTCGCGCTCCTaGTCCGCCACCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QEVLGPSVVDTKPSGDHPRSSRS*SATTAS
Trigger: GCTGGCCGTGGTGGCGGAGCAGGAGCGCGAGGACCG...AGGGTGGTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp ACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGGCCGGGAGGGCTCCTaGGCCCCCATGCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: TVAMMFSRVSTGAAQRVCGREGS*APMLTS
Trigger: GGACGTCAGCATGGGGGCGCAGGAGCCCTCCCGGCC...GCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR GCA 90 bp AGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGGCCGGGAGGGCTCCTaGGCCCCCATGCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: RRPGRNREPALLLTAPSGGREGS*APMLTS
Trigger: GGACGTCAGCATGGGGGCGCAGGAGCCCTCCCGGCC...CCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAGCCCTCAGCCAGCCTTaGCCCCTCTGCGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRALSQP*PLCART
Trigger: CGTCCGGGCGCAGAGGGGCCAAGGCTGGCTGAGGGC...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TCGCGCTCGCACAGCTCGAACTGCGCCACGGCGGCCAGGTGGGCCGCGAAGTGCGTGCCCAAGGCTTGCTaGGCACTCACAGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SRSHSSNCATAARWAAKCVPKAC*ALTGRS
Trigger: TGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCAC...GCACTTCGCGGCCCACCTGGCCGCCGTGGCGCAGTTCGAGCTGTGCGAGCGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR TCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAGCACGGGCGAGGAAGTaGCTCGGCCTGTGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRARARK*LGLCRP
Trigger: CGGGCGACACAGGCCGAGTCACTTCCTCGCCCGTGC...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCAGCTGCTCGGCCGTCTTaGGGACCAGGCGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TSAALNSSQRGVPKACWAAARPS*GPGAPC
Trigger: GCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGC...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GTACCCAGCCAGCTGCTGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTCCAGCCAGCTGCTGCTaGTGCTCGGCCGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VPSQLLLLLGRLEDQAPLPASCC*CSAVLR
Trigger: CCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGG...AAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp CAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCAGGGAGCCGTGCTGGGTaGAGAAGTGCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: QRRESRLQPGRRGAVLGAGSRAG*RSAGWC
Trigger: ACACCATCCAGCACTTCTGCACCCAGCACGGCTCCC...TGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTGGCCGGGAGGGCTCCTaGGCCCCCATGCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSGREGS*APMLTS
Trigger: GGACGTCAGCATGGGGGCGCAGGAGCCCTCCCGGCC...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp CCCCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGCCCTCAGCCAGCCTTaGCCCCTCTGCGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: PLEPPEGVQDCRHPDLSPALSQP*PLCART
Trigger: CGTCCGGGCGCAGAGGGGCCAAGGCTGGCTGAGGGC...GGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TGGCAGTGGCCGTCCAGCCTCTGGGGAGGCACATCCTCAGCCCAGCGCCGTGCCAGGAGGCCTCCGACATaGAGGCCTCTGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: WQWPSSLWGGTSSAQRRARRPPT*RPLTLP
Trigger: AGGCAGAGTCAGAGGCCTCCATGTCGGAGGCCTCCT...GGCACGGCGCTGGGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCACTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CCA 90 bp CAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACCACCCTCGCTCACGGCGGCCCTaGGCTGCAGAGGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: QEVLGPSVVDTKPSGDHPRSRRP*AAEGRW
Trigger: CCATCTGCCCTCTGCAGCCCAGGGCCGCCGTGAGCG...AGGGTGGTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGCTGCTCGGCCGTCTTaGGGACCAGGCGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PRASRRSAGLPTPRFEPRAARPS*GPGAPC
Trigger: GCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGC...CCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp GAGCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCGCTGCTCGGCCGTCTTaGGGACCAGGCGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: EHRRPGRNREPALLLTAPAARPS*GPGAPC
Trigger: GCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGC...GGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCACAGAGGGCAGATGGGTaGGGCTCGGCCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GRNREPALLLTAPSGVCPQRADG*GSAPVS
Trigger: GGAGACAGGGGCCGAGCCTCACCCATCTGCCCTCTG...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CTCGGCCCCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGCCGGCCCCAAATCCTaGCTCAGCACTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGPTHEEDSHEADCGGALAGPKS*LSTAEA
Trigger: TGCCTCTGCAGTGCTGAGTCAGGATTTGGGGCCGGC...CAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGATCGCACAGCTCGAACTaGGCCACGGCGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRSHSSN*ATAARW
Trigger: CCACCTGGCCGCCGTGGCGCAGTTCGAGCTGTGCGA...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560869.6
CDS-3UTR GCA 90 bp ACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGTCGCACAGCTCGAACTaGGCCACGGCGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TREEPRTSAALNSSQRGVSHSSN*ATAARW
Trigger: CCACCTGGCCGCCGTGGCGCAGTTCGAGCTGTGCGA...CACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GGTAGAGCGAGGTGCCCGGCAGGGCAGGGGATGAACGGAGGGTGCGGTGGGCAGGGCTTCAGGTCCTCATaGAGGTTCTGGAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRARCPAGQGMNGGCGGQGFRSS*RFWSRV
Trigger: CACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCC...CTGCCCACCGCACCCTCCGTTCATCCCCTGCCCTGCCGGGCACCTCGCTCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GTACCCAGCCAGCTGCTGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTATGTACCCAGCCAGCTaGTGCTGCTGCTCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: VPSQLLLLLGRLEDQAPLMYPAS*CCCSAV
Trigger: GACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACAT...AAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp GAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: ETREEPRTSAALNSSQRGVGRAG*SQVAGE
Trigger: CTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTAC...ACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGCTCCCAGCGGGGTGTaGCCAAGGCTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QETREEPRTSAALNSSQRAPSGV*PRLAGH
Trigger: GTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGC...CCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTCCAGCTGACAGGGCCTaGACCTCCGCCAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: SGDDVFQGLHRGRPAGVRPADRA*TSARAR
Trigger: CCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGG...ACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR GCA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCACCAGCTGACAGGGCCTaGACCTCCGCCAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: TSAALNSSQRGVPKACWAPADRA*TSARAR
Trigger: CCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGG...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGCCCAGGGCCTGTCCCTaGCTTGGGGAAGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQPRACP*LGEGGA
Trigger: GGCTCCCCCTTCCCCAAGGCAGGGACAGGCCCTGGG...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GAGGTCCAGGCTGCAGTGAGCCTTGATGCCATGACCAGGCCACTGCACTCCAGCCCCAGGGCCTGTCCCTaGCTTGGGGAAGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EVQAAVSLDAMTRPLHSSPRACP*LGEGGA
Trigger: GGCTCCCCCTTCCCCAAGGCAGGGACAGGCCCTGGG...GCTGGAGTGCAGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCCTGGACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp GAGGTCCAGGCTGCAGTGAGCCTTGATGCCATGACCAGGCCACTGCACTCCAGCTGGCCGCCACTGTCCTaGCCCGGGTTCCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: EVQAAVSLDAMTRPLHSSWPPLS*PGFRKA
Trigger: GGCCTTGCGGAACCCGGGCCAGGACAGTGGCGGCCA...GCTGGAGTGCAGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCCTGGACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333007.8
CDS-3UTR CCA 90 bp CAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCACCAGGTCCTCCTTCATaGTGCGGCCCAAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: QRRESRLQPGRRGAVLGAPGPPS*CGPSAE
Trigger: TTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGG...TGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CCA 90 bp AGGACCCAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACGCAGTCGGATCTGCCTaGGGGGCAGGAGGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: RTQEVLGPSVVDTKPSGDAVGSA*GAGGSR
Trigger: TCGGGAGCCTCCTGCCCCCCAGGCAGATCCGACTGC...GTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CGTAGGCCGCCACGACGCCGAACTCGGCGGGGAACAGCGGCTTCAGCCGCTCCACATTGGCCGCCTCACTaGACAGGAATGTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRPPRRRTRRGTAASAAPHWPPH*TGMWPP
Trigger: TGGAGGCCACATTCCTGTCCAGTGAGGCGGCCAATG...TGGAGCGGCTGAAGCCGCTGTTCCCCGCCGAGTTCGGCGTCGTGGCGGCCTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CCA 90 bp AGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGTGGCCTCTCGGCCTTGGCCTaGGCCTGGGAGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: RVSTGAAQRVCVNLLNSGLSALA*AWEVIW
Trigger: CCAGATCACCTCCCAGGCCCAGGCCAAGGCCGAGAG...GCCACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp CAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCAAGGCTCAGGGTGTCCTaGGGTACCTGCCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: QRRESRLQPGRRGAVLGARLRVS*GTCQFC
Trigger: GCAGAATTGGCAGGTACCCCAGGACACCCTGAGCCT...TGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCGCTCACGGCGGCCCTaGGCTGCAGAGGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: RNREPALLLTAPSGVCPRRSRRP*AAEGRW
Trigger: CCATCTGCCCTCTGCAGCCCAGGGCCGCCGTGAGCG...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp AGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTCCTCGGGCTCCGCTaGGCTGGGCTGACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RRPGRNREPALLLTAPSGVLGLR*AGLTLL
Trigger: AAGAAGGGTCAGCCCAGCTCAGCGGAGCCCGAGGAC...CCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR TCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGACAAAGCCGTGGCTCTTaGGCTCACCCAGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRQSRGS*AHPGGP
Trigger: TGGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTG...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp TGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTTGGATGATGTACGCTGCTCGGCCGTCTTaGGGACCAGGCGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: CCSAVLRTRRPLLSWMMYAARPS*GPGAPC
Trigger: GCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGC...GTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR TCA 90 bp CAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACCACCCTCCTGCGCCCCCATGCTaGCGTCCAAGATGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: QEVLGPSVVDTKPSGDHPPAPPC*RPRCSG
Trigger: TCCGGAGCATCTTGGACGTCAGCATGGGGGCGCAGG...AGGGTGGTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp GCCTGGGAGGTGATCTGGATGATGTCGATGGCCAGCTCGCTGTGGCAGTGGCCGCCTGCGCCCCCATGCTaGCGTCCAAGATGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: AWEVIWMMSMASSLWQWPPAPPC*RPRCSG
Trigger: TCCGGAGCATCTTGGACGTCAGCATGGGGGCGCAGG...CGGCCACTGCCACAGCGAGCTGGCCATCGACATCATCCAGATCACCTCCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR TCA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCACCTGCGCCCCCATGCTaGCGTCCAAGATGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: TSAALNSSQRGVPKACWAPAPPC*RPRCSG
Trigger: TCCGGAGCATCTTGGACGTCAGCATGGGGGCGCAGG...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp GCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGGTGTCCGGGGATCCCTaGGCCTGGCTGCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: AQETREEPRTSAALNSSQVSGDP*AWLHSP
Trigger: GGGAGAGTGCAGCCAGGCTCAGGGATCCCCGGACAC...CTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp GCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCAGAGGGCAGATGGGTaGGGCTCGGCCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: AQETREEPRTSAALNSSQQRADG*GSAPVS
Trigger: GGAGACAGGGGCCGAGCCTCACCCATCTGCCCTCTG...CTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp AGGACCCAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACGGGGAAGGGGGAGCCTaGGAGGACCCAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RTQEVLGPSVVDTKPSGDGEGGA*EDPGGL
Trigger: AAGACCTCCTGGGTCCTCTCAGGCTCCCCCTTCCCC...GTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp CCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGACAGAGGGGCTGAGTCATGCCTaGGTCCGAAGGGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PPTRRTVMRPTVEGLWTEGLSHA*VRRAPS
Trigger: AGAGGGGGCCCTTCGGACTCAGGCATGACTCAGCCC...CTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp ACAGTGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCGGGCCATCCAGCCCCTaGCTGGACCCGGCTGCGTCC +
Preference number: 4 (lower is better)
Translates to: TVASGPHAGSGAGCQSRGGPSSP*LDPAAS
Trigger: GGACGCAGCCGGGTCCAGGCAGGGGCTGGATGGCCC...GCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560562.5
CDS-3UTR GCA 90 bp AGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGACAGCGCCTCCACCTTaGTCTGGCGCCGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: RPGRNREPALLLTAPSGVTAPPP*SGAAPA
Trigger: AGCTGGTGCGGCGCCAGAGCAAGGTGGAGGCGCTGT...CACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp CAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACCACCCTACAGCGCCTCCACCTTaGTCTGGCGCCGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QEVLGPSVVDTKPSGDHPTAPPP*SGAAPA
Trigger: AGCTGGTGCGGCGCCAGAGCAAGGTGGAGGCGCTGT...AGGGTGGTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GAGCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCTCGCACAGCTCGAACTaGGCCACGGCGGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EHRRPGRNREPALLLTAPSHSSN*ATAARW
Trigger: CCACCTGGCCGCCGTGGCGCAGTTCGAGCTGTGCGA...GGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560869.6
CDS-3UTR GCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSVGRAG*SQVAGE
Trigger: CTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTAC...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTTGGGGTAGAGCGAGGTaGCCGGCAGGGCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: REPALLLTAPSGVCPRLAWGRAR*PAGQGM
Trigger: CATCCCCTGCCCTGCCGGGCACCTCGCTCTACCCCA...AGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCACCCAGCCTCCAGGGGTaGCACCAGGTCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TSAALNSSQRGVPKACWAPSLQG*HQVLRG
Trigger: TCCTCTGAGGACCTGGTGCCACCCCTGGAGGCTGGG...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGACCCAGCCTCCAGGGGTaGCACCAGGTCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRPSLQG*HQVLRG
Trigger: TCCTCTGAGGACCTGGTGCCACCCCTGGAGGCTGGG...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CCA 90 bp CCTGAGTCCGAAGGGCCCCCTCTCAGGCTGAGAAGGAACTTTCAGGCCCAGGGATCAGCTCCTCCACTGTaGGGGGCGGGCCATCCAGCC +
Preference number: 4 (lower is better)
Translates to: PESEGPPLRLRRNFQAQGSAPPL*GAGHPA
Trigger: GGCTGGATGGCCCGCCCCCCACAGTGGAGGAGCTGA...TCCCTGGGCCTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCCCTTCGGACTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTGCCTCCACCTTGCTCTaGCGCCGCACCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSASTLL*RRTSSS
Trigger: GGAGGAGCTGGTGCGGCGCCAGAGCAAGGTGGAGGC...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CCTGAGTCCGAAGGGCCCCCTCTCAGGCTGAGAAGGAACTTTCAGGCCCAGGGAGCAGTCGGATCTGCCTaGGGGGCAGGAGGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PESEGPPLRLRRNFQAQGAVGSA*GAGGSR
Trigger: TCGGGAGCCTCCTGCCCCCCAGGCAGATCCGACTGC...TCCCTGGGCCTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCCCTTCGGACTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TCTACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGGCAGTCGGATCTGCCTaGGGGGCAGGAGGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: STVAMMFSRVSTGAAQRVAVGSA*GAGGSR
Trigger: TCGGGAGCCTCCTGCCCCCCAGGCAGATCCGACTGC...CACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CCA 90 bp AGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTTGGCCGTCCAGCCTCTaGGGAGGCACATCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SGDDVFQGLHRGRPAGVRWPSSL*GGTSSA
Trigger: GGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCA...ACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCACTCTCGGCCTTGGCCTaGGCCTGGGAGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: GRNREPALLLTAPSGVCPLSALA*AWEVIW
Trigger: CCAGATCACCTCCCAGGCCCAGGCCAAGGCCGAGAG...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGCTCTCGGCCTTGGCCTaGGCCTGGGAGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: RPGRNREPALLLTAPSGVLSALA*AWEVIW
Trigger: CCAGATCACCTCCCAGGCCCAGGCCAAGGCCGAGAG...CACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGGCCGGGGAGCCGTGCTaGGTGCAGAAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RPGRNREPALLLTAPSGVAGEPC*VQKCWM
Trigger: CATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGC...CACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AGGACCCAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACAGCCAGACTTCTGGGTaGCAGGGCCCACGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: RTQEVLGPSVVDTKPSGDSQTSG*QGPRWH
Trigger: GTGCCACCGTGGGCCCTGCCACCCAGAAGTCTGGCT...GTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
3UTR CAA 72 bp TGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCTCTaGAGCTCACCCAGGGGGCCCAGCAGGAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CRFWSRVSKPWL*SSPRGPSRRLR
Trigger: CCTGAGCCTCCTGCTGGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR TCA 90 bp CCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGACAGAGAGCCCAAGTCCAGCGTaGTGCTCTCGGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PPTRRTVMRPTVEGLWTESPSPA*CSRPWP
Trigger: AGGCCAAGGCCGAGAGCATCACGCTGGACTTGGGCT...CTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGCCCAAGTCCAGCGTaGTGCTCTCGGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRSPSPA*CSRPWP
Trigger: AGGCCAAGGCCGAGAGCATCACGCTGGACTTGGGCT...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp CGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTCCTGCGCCCCCATGCTaGCGTCCAAGATGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: REPALLLTAPSGVCPRLAPAPPC*RPRCSG
Trigger: TCCGGAGCATCTTGGACGTCAGCATGGGGGCGCAGG...AGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp CCCCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCCGAGGAGGACAGTCATaGGGCCGACTGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLEPPEGVQDCRHPDLSPRGGQS*GRLWRG
Trigger: GCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCG...GGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp ACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGACCCTGGTTCAGGCCTaGAGGCTCCTGGCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: TREEPRTSAALNSSQRGVTLVQA*RLLARL
Trigger: AAGGCGAGCCAGGAGCCTGCAGGCCTGAACCAGGGT...CACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTACCCTGGTTCAGGCCTaGAGGCTCCTGGCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: ETREEPRTSAALNSSQRGTLVQA*RLLARL
Trigger: AAGGCGAGCCAGGAGCCTGCAGGCCTGAACCAGGGT...ACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GAGCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCGCCAGCTGCTGCTGCTaGTCGGCCGTCTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: EHRRPGRNREPALLLTAPASCCC*SAVLRT
Trigger: GGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGC...GGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp TCCTTCACCAGGTGCAGGTGCAAGGCCTCCATGAGCTCCTCCCGGAAACAGCCCGCCAGCTGCTGCTGCTaGTCGGCCGTCTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: SFTRCRCKASMSSSRKQPASCCC*SAVLRT
Trigger: GGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGC...GGGCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp CGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTCCAGCCAGCTGCTGCTaGTGCTCGGCCGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: REPALLLTAPSGVCPRLAPASCC*CSAVLR
Trigger: CCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGG...AGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACCACCCTATGTACCCAGCCAGCTaGTGCTGCTGCTCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: QEVLGPSVVDTKPSGDHPMYPAS*CCCSAV
Trigger: GACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACAT...AGGGTGGTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp AGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGTCCGGAGCGGCGGGGAATaGACGTGTGGAAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RASRRSAGLPTPRFEPRVRSGGE*TCGSGG
Trigger: ACCTCCGCTTCCACACGTCCATTCCCCGCCGCTCCG...GACCCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTAGCACGCCCAGCACCTaGTCGCGCAGCAGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: REPALLLTAPSGVCPRLASTPST*SRSSSY
Trigger: GTACGAGCTGCTGCGCGACCAGGTGCTGGGCGTGCT...AGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGTGGCCGTCCAGCCTCTaGGGAGGCACATCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: YSGDDVFQGLHRGRPAGVWPSSL*GGTSSA
Trigger: GGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCA...CACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp AATAGGGGCCGGGAGGGCTCCTGCGCCCCCATGCTGACGTCCAAGATGCTCCGGGCCTGGGAGGTGATCTaGATGATGTCGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NRGREGSCAPMLTSKMLRAWEVI*MMSMAS
Trigger: GCTGGCCATCGACATCATCCAGATCACCTCCCAGGC...CCGGAGCATCTTGGACGTCAGCATGGGGGCGCAGGAGCCCTCCCGGCCCCTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp CCCCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGCCGGGGAGCCGTGCTaGGTGCAGAAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: PLEPPEGVQDCRHPDLSPAGEPC*VQKCWM
Trigger: CATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGC...GGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp GCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGGCCGGGGAGCCGTGCTaGGTGCAGAAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: AQETREEPRTSAALNSSQAGEPC*VQKCWM
Trigger: CATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGC...CTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GAGGTCCAGGCTGCAGTGAGCCTTGATGCCATGACCAGGCCACTGCACTCCAGCGCCGGGGAGCCGTGCTaGGTGCAGAAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: EVQAAVSLDAMTRPLHSSAGEPC*VQKCWM
Trigger: CATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGC...GCTGGAGTGCAGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCCTGGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp CCTGAGTCCGAAGGGCCCCCTCTCAGGCTGAGAAGGAACTTTCAGGCCCAGGGAAGCCAGACTTCTGGGTaGCAGGGCCCACGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PESEGPPLRLRRNFQAQGSQTSG*QGPRWH
Trigger: GTGCCACCGTGGGCCCTGCCACCCAGAAGTCTGGCT...TCCCTGGGCCTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCCCTTCGGACTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CTGCAGGCGAATGATCTCGGCCAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCTCCGCTGAGCTGGGCTaGCCCTTCTTCTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LQANDLGQRRESRLQPGRSAELG*PFFFFP
Trigger: AGGGAAGAAGAAGAAGGGTCAGCCCAGCTCAGCGGA...GCGACCTGGCTGCAGCCTGCTCTCCCTACGCTGGCCGAGATCATTCGCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560562.5
CDS-3UTR TCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCCCAAGTCCAGCGTaGTGCTCTCGGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSSPSPA*CSRPWP
Trigger: AGGCCAAGGCCGAGAGCATCACGCTGGACTTGGGCT...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp CCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGCCATTCCACCATTGCTaGATCCCGCTCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PRASRRSAGLPTPRFEPRPFHHC*IPLTAA
Trigger: GGCCGCCGTGAGCGGGATTCAGCAATGGTGGAATGG...CCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGCCATTCCACCATTGCTaGATCCCGCTCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQPFHHC*IPLTAA
Trigger: GGCCGCCGTGAGCGGGATTCAGCAATGGTGGAATGG...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp GCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGGGGGCCACCTGGATGTaGCGTCTAATGCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: AQETREEPRTSAALNSSQGATWM*RLMLAV
Trigger: CACCGCCAGCATTAGACGTCACATCCAGGTGGCCCC...CTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp AGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGGGGCCACCTGGATGTaGCGTCTAATGCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RTSAALNSSQRGVPKACWGATWM*RLMLAV
Trigger: CACCGCCAGCATTAGACGTCACATCCAGGTGGCCCC...CCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp AGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGTCGGCCCCCTCTCAGGCTaGGAAGGAACTTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RASRRSAGLPTPRFEPRVGPLSG*EGTFRP
Trigger: GGGCCTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCC...GACCCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp GGGGAGCCTGAGAGGACCCAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGGCCGGCCCCAAATCCTaGCTCAGCACTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GEPERTQEVLGPSVVDTKAGPKS*LSTAEA
Trigger: TGCCTCTGCAGTGCTGAGTCAGGATTTGGGGCCGGC...CTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCTCTCAGGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp GTACCCAGCCAGCTGCTGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTCTCTTGAACAGTGGCTaGGACAGGAGAGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: VPSQLLLLLGRLEDQAPLLLNSG*DRRGRM
Trigger: CATCCTGCCTCTCCTGTCTCAGCCACTGTTCAAGAG...AAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561156.1
CDS-3UTR GCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTGGGCCATCCAGCCCCTaGCTGGACCCGGCTGCGTCC +
Preference number: 4 (lower is better)
Translates to: RSRALGGAHAEQENELTFGPSSP*LDPAAS
Trigger: GGACGCAGCCGGGTCCAGGCAGGGGCTGGATGGCCC...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGACCCAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACATGGTGCGGCCCAAGTaGAGAAAGACGCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RTQEVLGPSVVDTKPSGDMVRPK*RKTLSG
Trigger: CCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCAT...GTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GTACCCAGCCAGCTGCTGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGTGTCCTGGGGTACCTaGCAATTCTGCTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: VPSQLLLLLGRLEDQAPLVSWGT*QFCSMD
Trigger: GTCCATGGAGCAGAATTGGCAGGTACCCCAGGACAC...AAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp ACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGT +
Preference number: 4 (lower is better)
Translates to: TREEPRTSAALNSSQRGVAAQRV*VNLLNS
Trigger: ACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGC...CACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGT +
Preference number: 4 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRAAQRV*VNLLNS
Trigger: ACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGC...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GTAGTAGACACCAAGCCCTCGGGGGACCACCCTCTAGTTGAGGCCTTGGGGGATCCAGCCAGCTGCTGCTaGTGCTCGGCCGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VVDTKPSGDHPLVEALGDPASCC*CSAVLR
Trigger: CCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGG...ATCCCCCAAGGCCTCAACTAGAGGGTGGTCCCCCGAGGGCTTGGTGTCTACTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp CCCCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCTACCCAGCCAGCTGCTaGTGCTGCTCGGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: PLEPPEGVQDCRHPDLSPYPASC*CCSAVL
Trigger: CAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTA...GGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp GCACATCCTCAGCCCAGCGCCGTGCCTCTAGCTCCAGAGCTCGGTCCATCAACTATGTACCCAGCCAGCTaGTGCTGCTGCTCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: AHPQPSAVPLAPELGPSTMYPAS*CCCSAV
Trigger: GACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACAT...AGTTGATGGACCGAGCTCTGGAGCTAGAGGCACGGCGCTGGGCTGAGGATGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR GCA 90 bp ACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGGGGAGCCGTGCTGGGTaGAGAAGTGCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: TREEPRTSAALNSSQRGVGSRAG*RSAGWC
Trigger: ACACCATCCAGCACTTCTGCACCCAGCACGGCTCCC...CACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGGGAGCCGTGCTGGGTaGAGAAGTGCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: RRPGRNREPALLLTAPSGGSRAG*RSAGWC
Trigger: ACACCATCCAGCACTTCTGCACCCAGCACGGCTCCC...CCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGACCCAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACATGGCACTGGGGTCCTaGAGGCGAATGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RTQEVLGPSVVDTKPSGDMALGS*RRMISA
Trigger: GGCCGAGATCATTCGCCTGCAGGACCCCAGTGCCAT...GTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp GAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTATGGCACTGGGGTCCTaGAGGCGAATGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: ETREEPRTSAALNSSQRGMALGS*RRMISA
Trigger: GGCCGAGATCATTCGCCTGCAGGACCCCAGTGCCAT...ACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp TTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGATGGCACTGGGGTCCTaGAGGCGAATGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: FQGLHRGRPAGVREPLEQMALGS*RRMISA
Trigger: GGCCGAGATCATTCGCCTGCAGGACCCCAGTGCCAT...CTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559406.5
ENST00000560562.5
ENST00000561156.1
CDS-3UTR GCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGGCCGGGAGGGCTCCTaGGCCCCCATGCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPGREGS*APMLTS
Trigger: GGACGTCAGCATGGGGGCGCAGGAGCCCTCCCGGCC...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCATGTTGCCTGGTTGGCTaGCCAGGATGGGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GRNREPALLLTAPSGVCPCCLVG*PGWELL
Trigger: CAGGAGCTCCCATCCTGGGCAGCCAACCAGGCAACA...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGTGTTGCCTGGTTGGCTaGCCAGGATGGGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RRPGRNREPALLLTAPSGCCLVG*PGWELL
Trigger: CAGGAGCTCCCATCCTGGGCAGCCAACCAGGCAACA...CCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGGTCAAGCTTGCCCTaGCCCTGCCCAGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSRSSLP*PCPDLS
Trigger: GCTGAGGTCTGGGCAGGGGCAGGGCAAGCTTGACCT...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGAGGCCTCCGACATaGAGGCCTCTGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GRNREPALLLTAPSGVCPRRPPT*RPLTLP
Trigger: AGGCAGAGTCAGAGGCCTCCATGTCGGAGGCCTCCT...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CCA 90 bp ACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGAGGAGGCCTCCGACATaGAGGCCTCTGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TREEPRTSAALNSSQRGVRRPPT*RPLTLP
Trigger: AGGCAGAGTCAGAGGCCTCCATGTCGGAGGCCTCCT...CACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACCATCCAGCCCCTGCCTaGACCCGGCTGCGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GGRQERGGLNEVTGKRFNHPAPA*TRLRPR
Trigger: CCGAGGACGCAGCCGGGTCCAGGCAGGGGCTGGATG...GTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CTCGGCCCCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGTCCTCATGCAGGTTCTaGAGCAGGGTGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: LGPTHEEDSHEADCGGALSSCRF*SRVSKP
Trigger: CGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGA...CAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GTACCCAGCCAGCTGCTGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGGATGGTGTCAGCATTaGCCAGGATGTACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VPSQLLLLLGRLEDQAPLGWCQH*PGCTQP
Trigger: TGGCTGGGTACATCCTGGCCAATGCTGACACCATCC...AAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp ACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGGTGCCCAAGGCTTGCTaGGCACTCACAGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TREEPRTSAALNSSQRGVVPKAC*ALTGRS
Trigger: TGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCAC...CACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp CAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACCACCCTACTGTGGAGGGGCTCTaGACAGAGGTGTCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: QEVLGPSVVDTKPSGDHPTVEGL*TEVSGD
Trigger: ATCCCCGGACACCTCTGTCCAGAGCCCCTCCACAGT...AGGGTGGTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACTGGCAGGGCCCACGGTaGCACCCCCAGGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GRQERGGLNEVTGKRFNYWQGPR*HPQGLS
Trigger: GGACAGGCCCTGGGGGTGCCACCGTGGGCCCTGCCA...GTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp AGCCAGCTGCTGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTGTCTAGTCACGCCCTaGAGAGGAAGGGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SQLLLLLGRLEDQAPLAECLVTP*RGRASG
Trigger: ACCTGAAGCCCTTCCTCTCCAGGGCGTGACTAGACA...CTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561156.1
CDS-3UTR TCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGATCCGCTGAGCTGGGCTaGCCCTTCTTCTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRSAELG*PFFFFP
Trigger: AGGGAAGAAGAAGAAGGGTCAGCCCAGCTCAGCGGA...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR TCA 90 bp CGCCCCTTGCTGAGTTGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCCAAAGCCGTGGCTCTTaGGCTCACCCAGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RPLLSWMMYSFTRCRCKAQSRGS*AHPGGP
Trigger: TGGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTG...GGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR TCA 90 bp GTAGTAGACACCAAGCCCTCGGGGGACCACCCTCTAGTTGAGGCCTTGGGGGATGGTGCAAGGCCTCCATaGGCTCCTCCCGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: VVDTKPSGDHPLVEALGDGARPP*APPGNS
Trigger: GCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACC...ATCCCCCAAGGCCTCAACTAGAGGGTGGTCCCCCGAGGGCTTGGTGTCTACTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp ACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGTGGCCACCTCAATCTTaGTGGCACTGGGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TREEPRTSAALNSSQRGVWPPQS*WHWGPA
Trigger: TGCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCA...CACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp CCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGACAGAGTCAGGTGGCCTTTGCTaGAGTCAGGGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PPTRRTVMRPTVEGLWTESGGLC*SQGSRW
Trigger: CCACCTGCTACCCTGACTTCAGCAAAGGCCACCTGA...CTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp AGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGTCGGCTGCAGTGAGCCTTaGTGCCATGACCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: RASRRSAGLPTPRFEPRVGCSEP*CHDQAT
Trigger: AGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCC...GACCCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp CAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGCCAAAGATGTCCACGTaGCAGTCCCCAGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QETREEPRTSAALNSSQRPKMST*QSPEPV
Trigger: CACAGGCTCTGGGGACTGTCACGTGGACATCTTTGG...CCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp GAGCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGGCATCAGCCGGGCTaGGTCATGCCTGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: EHRRPGRNREPALLLTAPRHQPG*VMPESE
Trigger: TTCGGACTCAGGCATGACTCAGCCCGGCTGATGCCT...GGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCAGGCTTCAGGTCCTCATaGAGGTTCTGGAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TSAALNSSQRGVPKACWAGFRSS*RFWSRV
Trigger: CACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCC...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GGGGAGCCTGAGAGGACCCAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGT +
Preference number: 4 (lower is better)
Translates to: GEPERTQEVLGPSVVDTKAAQRV*VNLLNS
Trigger: ACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGC...CTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCTCTCAGGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGT +
Preference number: 4 (lower is better)
Translates to: RNREPALLLTAPSGVCPRAAQRV*VNLLNS
Trigger: ACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGC...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCATTCACCAGGTGCAGGTaGAAGGCCTCCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRNREPALLLTAPSGVCPFTRCR*KASMSS
Trigger: GGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAA...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp ACCAGCAGCACCCGCTTTATCTGTGAGCCCAAGTCCAGCGTGATGCTCTCGGCCTACCCAGCCAGCTGCTaGTGCTGCTCGGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: TSSTRFICEPKSSVMLSAYPASC*CCSAVL
Trigger: CAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTA...GGCCGAGAGCATCACGCTGGACTTGGGCTCACAGATAAAGCGGGTGCTGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR GCA 90 bp CTCGGCCCCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGTGCTGGGTGCAGAAGTaGTGGATGGTGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: LGPTHEEDSHEADCGGALCWVQK*WMVSAL
Trigger: CAATGCTGACACCATCCAGCACTTCTGCACCCAGCA...CAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GAGGTCCAGGCTGCAGTGAGCCTTGATGCCATGACCAGGCCACTGCACTCCAGCGGGAGCCGTGCTGGGTaGAGAAGTGCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: EVQAAVSLDAMTRPLHSSGSRAG*RSAGWC
Trigger: ACACCATCCAGCACTTCTGCACCCAGCACGGCTCCC...GCTGGAGTGCAGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCCTGGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp TCCTTCACCAGGTGCAGGTGCAAGGCCTCCATGAGCTCCTCCCGGAAACAGCCCGGGAGCCGTGCTGGGTaGAGAAGTGCTGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: SFTRCRCKASMSSSRKQPGSRAG*RSAGWC
Trigger: ACACCATCCAGCACTTCTGCACCCAGCACGGCTCCC...GGGCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp GGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GGRQERGGLNEVTGKRFNVGRAG*SQVAGE
Trigger: CTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTAC...GTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGATGGCACTGGGGTCCTaGAGGCGAATGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RNREPALLLTAPSGVCPRMALGS*RRMISA
Trigger: GGCCGAGATCATTCGCCTGCAGGACCCCAGTGCCAT...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACCCAGGCCGGGAGGGCTCCTaGGCCCCCATGCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: RQERGGLNEVTGKRFNYPGREGS*APMLTS
Trigger: GGACGTCAGCATGGGGGCGCAGGAGCCCTCCCGGCC...TGGGTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp TGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCTCTTCCAGCTGACAGGGCCTaGACCTCCGCCAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: WLQVLMQVLEQGVKAVALPADRA*TSARAR
Trigger: CCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGG...AAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR GCA 90 bp AGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCAGGGTTCTTTCCTTGCGTaGACACGATCAGCTATCGTT +
Preference number: 4 (lower is better)
Translates to: SVGRAGCSQVAGEPCWVQGSFLA*TRSAIV
Trigger: AACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC...CTGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR GCA 90 bp AGGACCCAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACATCCCTGAGCCTGGCTaGACTCTCCCTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RTQEVLGPSVVDTKPSGDIPEPG*TLPPGS
Trigger: AGAACCAGGAGGGAGAGTGCAGCCAGGCTCAGGGAT...GTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCAGAGTCACGCCGGACCTaGGGCCTTTCTGCTGTAATG +
Preference number: 4 (lower is better)
Translates to: TSAALNSSQRGVPKACWAESRRT*GLSAVM
Trigger: CATTACAGCAGAAAGGCCCCAGGTCCGGCGTGACTC...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCACAAGTCGAGGGTGCCTaGCACAGGCTGATGGCTCTA +
Preference number: 4 (lower is better)
Translates to: TSAALNSSQRGVPKACWAQVEGA*HRLMAL
Trigger: TAGAGCCATCAGCCTGTGCCAGGCACCCTCGACTTG...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp ACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCAGGTCCTCCTTCATaGTGCGGCCCAAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: TREEPRTSAALNSSQRGVPGPPS*CGPSAE
Trigger: TTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGG...CACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560869.6
CDS-3UTR CCA 90 bp TTCTCTTCCAGTTCTGTCTTCCATTCCACCATTGCTGAATCCCGCTCACGGCGGGCCACGGCGGCCAGGTaGGCCGCGAAGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FSSSSVFHSTIAESRSRRATAAR*AAKCWW
Trigger: CCACCAGCACTTCGCGGCCCACCTGGCCGCCGTGGC...CCGCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGACAGAACTGGAAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAGCCTGGGAGGTGATCTaGATGATGTCGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRNREPALLLTAPSGVCPAWEVI*MMSMAS
Trigger: GCTGGCCATCGACATCATCCAGATCACCTCCCAGGC...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGCCTGGGAGGTGATCTaGATGATGTCGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RRPGRNREPALLLTAPSGAWEVI*MMSMAS
Trigger: GCTGGCCATCGACATCATCCAGATCACCTCCCAGGC...CCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp ACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGAGGCTCAGGGTGTCCTaGGGTACCTGCCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: TREEPRTSAALNSSQRGVRLRVS*GTCQFC
Trigger: GCAGAATTGGCAGGTACCCCAGGACACCCTGAGCCT...CACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GTAGGCCGCCACGACGCCGAACTCGGCGGGGAACAGCGGCTTCAGCCGCTCCACTTTACAAAGAGTCCTTaGTGTTGCCTGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VGRHDAELGGEQRLQPLHFTKSP*CCLVGC
Trigger: GCAGCCAACCAGGCAACACCAAGGACTCTTTGTAAA...GTGGAGCGGCTGAAGCCGCTGTTCCCCGCCGAGTTCGGCGTCGTGGCGGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CCA 90 bp GAGGTCCAGGCTGCAGTGAGCCTTGATGCCATGACCAGGCCACTGCACTCCAGCACTGTGGAGGGGCTCTaGACAGAGGTGTCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: EVQAAVSLDAMTRPLHSSTVEGL*TEVSGD
Trigger: ATCCCCGGACACCTCTGTCCAGAGCCCCTCCACAGT...GCTGGAGTGCAGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCCTGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp ACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGGAGCTCACATTTTCCTaGGGTAGAGCGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TREEPRTSAALNSSQRGVELTFS*GRARCP
Trigger: CGGGCACCTCGCTCTACCCCAGGAAAATGTGAGCTC...CACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR CAA 72 bp ATGTACCCAGCCAGCTGCTGCTGCTGCTCGGCCGTCTaGAGGACCAGGCGCCCCTTGCTGAGTTGGATGATG +
Preference number: 4 (lower is better)
Translates to: MYPASCCCCSAV*RTRRPLLSWMM
Trigger: CATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR TCA 90 bp CAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGCACCCGCTTTATCTGTaGGCCCAAGTCCAGCGTGAT +
Preference number: 4 (lower is better)
Translates to: QETREEPRTSAALNSSQRHPLYL*AQVQRD
Trigger: ATCACGCTGGACTTGGGCTCACAGATAAAGCGGGTG...CCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp GAACAGTGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGCAAAGCCGTGGCTCTTaGGCTCACCCAGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: EQWLQVLMQVLEQGVKAVQSRGS*AHPGGP
Trigger: TGGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTG...CACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCACTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR TCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTTGGCCACCTCAATCTTaGTGGCACTGGGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSWPPQS*WHWGPA
Trigger: TGCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCA...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp CAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACCACCCTTGCTCCGGATGCGCTTaGCCTCACTGTTGGATAGGT +
Preference number: 4 (lower is better)
Translates to: QEVLGPSVVDTKPSGDHPCSGCA*PHCWIG
Trigger: ACCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCA...AGGGTGGTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp GAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTTGCTCCGGATGCGCTTaGCCTCACTGTTGGATAGGT +
Preference number: 4 (lower is better)
Translates to: ETREEPRTSAALNSSQRGCSGCA*PHCWIG
Trigger: ACCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCA...ACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp CGGCCTCCCAAAGATGTCCACGTGACAGTCCCCAGAGCCTGTGACTATGTTAGGCGAGGAGGACAGTCATaGGGCCGACTGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RPPKDVHVTVPRACDYVRRGGQS*GRLWRG
Trigger: GCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCG...CCTAACATAGTCACAGGCTCTGGGGACTGTCACGTGGACATCTTTGGGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGACAGAGGGCTACAAGATCCCTTaGGCCCAGGAGTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: PPTRRTVMRPTVEGLWTEGYKIP*AQEFQT
Trigger: TGTCTGGAACTCCTGGGCTCAAGGGATCTTGTAGCC...CTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CCTGAGTCCGAAGGGCCCCCTCTCAGGCTGAGAAGGAACTTTCAGGCCCAGGGACCAAAGATGTCCACGTaGCAGTCCCCAGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PESEGPPLRLRRNFQAQGPKMST*QSPEPV
Trigger: CACAGGCTCTGGGGACTGTCACGTGGACATCTTTGG...TCCCTGGGCCTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCCCTTCGGACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GCCTGGGAGGTGATCTGGATGATGTCGATGGCCAGCTCGCTGTGGCAGTGGCCGGTGTCCTGGGGTACCTaGCAATTCTGCTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: AWEVIWMMSMASSLWQWPVSWGT*QFCSMD
Trigger: GTCCATGGAGCAGAATTGGCAGGTACCCCAGGACAC...CGGCCACTGCCACAGCGAGCTGGCCATCGACATCATCCAGATCACCTCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR GCA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCAGTGTCCTGGGGTACCTaGCAATTCTGCTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: TSAALNSSQRGVPKACWAVSWGT*QFCSMD
Trigger: GTCCATGGAGCAGAATTGGCAGGTACCCCAGGACAC...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGTCCTGGGGTACCTaGCAATTCTGCTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: ETREEPRTSAALNSSQRGVSWGT*QFCSMD
Trigger: GTCCATGGAGCAGAATTGGCAGGTACCCCAGGACAC...ACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGGGCTTCAGGTCCTCATaGAGGTTCTGGAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AQETREEPRTSAALNSSQGFRSS*RFWSRV
Trigger: CACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCC...CTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTTGGATGATGTAGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGT +
Preference number: 4 (lower is better)
Translates to: LLLGRLEDQAPLAELDDVAAQRV*VNLLNS
Trigger: ACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGC...TACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp TCTACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTTCACCAGGTGCAGGTaGAAGGCCTCCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: STVAMMFSRVSTGAAQRVFTRCR*KASMSS
Trigger: GGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAA...CACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp AGGACCCAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACTACTCCTTCACCAGGTaGAGGTGCAAGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: RTQEVLGPSVVDTKPSGDYSFTR*RCKASM
Trigger: CATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTA...GTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp CGGCCTCCCAAAGATGTCCACGTGACAGTCCCCAGAGCCTGTGACTATGTTAGGGCCAGCTGCTGCTGCTaGTCGGCCGTCTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: RPPKDVHVTVPRACDYVRASCCC*SAVLRT
Trigger: GGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGC...CCTAACATAGTCACAGGCTCTGGGGACTGTCACGTGGACATCTTTGGGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp AGTTGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCCATGAGCTCCGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SWMMYSFTRCRCKASMSSVGRAG*SQVAGE
Trigger: CTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTAC...GGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTCCCAGCGGGGTGTaGCCAAGGCTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPAPSGV*PRLAGH
Trigger: GTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGC...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GTAGTAGACACCAAGCCCTCGGGGGACCACCCTCTAGTTGAGGCCTTGGGGGATTGTTGCCTGGTTGGCTaGCCAGGATGGGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VVDTKPSGDHPLVEALGDCCLVG*PGWELL
Trigger: CAGGAGCTCCCATCCTGGGCAGCCAACCAGGCAACA...ATCCCCCAAGGCCTCAACTAGAGGGTGGTCCCCCGAGGGCTTGGTGTCTACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAAGAGTCCTTGGTGTTaGCTGGTTGGCTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRNREPALLLTAPSGVCPKSPWC*LVGCPG
Trigger: TCCTGGGCAGCCAACCAGGCAACACCAAGGACTCTT...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp ATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCTCCCGGGAGCTCGCTaGGCCCGGCTCCTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: MGAPAPIGHVNKPRSVQFLPGAR*ARLLQS
Trigger: GGACTGAAGGAGCCGGGCCCAGCGAGCTCCCGGGAG...GAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CCTGAGTCCGAAGGGCCCCCTCTCAGGCTGAGAAGGAACTTTCAGGCCCAGGGACAAGTCGAGGGTGCCTaGCACAGGCTGATGGCTCTA +
Preference number: 4 (lower is better)
Translates to: PESEGPPLRLRRNFQAQGQVEGA*HRLMAL
Trigger: TAGAGCCATCAGCCTGTGCCAGGCACCCTCGACTTG...TCCCTGGGCCTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCCCTTCGGACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACCCCAGCCTCCAGGGGTaGCACCAGGTCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GGRQERGGLNEVTGKRFNPSLQG*HQVLRG
Trigger: TCCTCTGAGGACCTGGTGCCACCCCTGGAGGCTGGG...GTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTCATCCAGCCCCTGCCTaGACCCGGCTGCGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPAHPAPA*TRLRPR
Trigger: CCGAGGACGCAGCCGGGTCCAGGCAGGGGCTGGATG...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CCA 90 bp CCTGAGTCCGAAGGGCCCCCTCTCAGGCTGAGAAGGAACTTTCAGGCCCAGGGACATTGGCCGCCTCACTaGACAGGAATGTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PESEGPPLRLRRNFQAQGHWPPH*TGMWPP
Trigger: TGGAGGCCACATTCCTGTCCAGTGAGGCGGCCAATG...TCCCTGGGCCTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCCCTTCGGACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTCATTGGCCGCCTCACTaGACAGGAATGTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSHWPPH*TGMWPP
Trigger: TGGAGGCCACATTCCTGTCCAGTGAGGCGGCCAATG...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560869.6
CDS-3UTR CCA 90 bp CGGCCTCCCAAAGATGTCCACGTGACAGTCCCCAGAGCCTGTGACTATGTTAGGAGCTCGCTGTGGCAGTaGCCGTCCAGCCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RPPKDVHVTVPRACDYVRSSLWQ*PSSLWG
Trigger: TCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCT...CCTAACATAGTCACAGGCTCTGGGGACTGTCACGTGGACATCTTTGGGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CGGCCTCCCAAAGATGTCCACGTGACAGTCCCCAGAGCCTGTGACTATGTTAGGCTCTCGGCCTTGGCCTaGGCCTGGGAGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: RPPKDVHVTVPRACDYVRLSALA*AWEVIW
Trigger: CCAGATCACCTCCCAGGCCCAGGCCAAGGCCGAGAG...CCTAACATAGTCACAGGCTCTGGGGACTGTCACGTGGACATCTTTGGGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTTGGATGATGAGGCTCAGGGTGTCCTaGGGTACCTGCCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: CCCSAVLRTRRPLLSWMMRLRVS*GTCQFC
Trigger: GCAGAATTGGCAGGTACCCCAGGACACCCTGAGCCT...CATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp GAGCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGGCTCAGGGTGTCCTaGGGTACCTGCCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: EHRRPGRNREPALLLTAPRLRVS*GTCQFC
Trigger: GCAGAATTGGCAGGTACCCCAGGACACCCTGAGCCT...GGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCATCCTCATGCAGGTTCTaGAGCAGGGTGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: TSAALNSSQRGVPKACWASSCRF*SRVSKP
Trigger: CGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGA...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp CCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGACAGAGGGATGGTGTCAGCATTaGCCAGGATGTACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PPTRRTVMRPTVEGLWTEGWCQH*PGCTQP
Trigger: TGGCTGGGTACATCCTGGCCAATGCTGACACCATCC...CTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCAGGATGGTGTCAGCATTaGCCAGGATGTACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TSAALNSSQRGVPKACWAGWCQH*PGCTQP
Trigger: TGGCTGGGTACATCCTGGCCAATGCTGACACCATCC...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGATGGGTGCAGAAGTGCTaGATGGTGTCAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRWVQKC*MVSALA
Trigger: GGCCAATGCTGACACCATCCAGCACTTCTGCACCCA...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp CCAGGTCGCCGGGGAGCCGTGCTGGGTGCAGAAGTGCTGGATGGTGTCAGCATTTGGGTGCAGAAGTGCTaGATGGTGTCAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: PGRRGAVLGAEVLDGVSIWVQKC*MVSALA
Trigger: GGCCAATGCTGACACCATCCAGCACTTCTGCACCCA...AATGCTGACACCATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGCGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp TTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGAGGATAGCGCTCAGGTaGCCTTTGCTGAAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: FQGLHRGRPAGVREPLEQRIALR*PLLKSG
Trigger: CCCTGACTTCAGCAAAGGCCACCTGAGCGCTATCCT...CTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp AGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGAGGATAGCGCTCAGGTaGCCTTTGCTGAAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RRPGRNREPALLLTAPSGRIALR*PLLKSG
Trigger: CCCTGACTTCAGCAAAGGCCACCTGAGCGCTATCCT...CCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GAGCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCTTGGTGTTGCCTGGTTaGCTGCCCAGGATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: EHRRPGRNREPALLLTAPLVLPG*LPRMGA
Trigger: AGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAA...GGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GGGCGTGGGGGATTGTCTCAGGGGACTGAGACAAGAGGATCACTTGAACCAGGACCTCAGCCAGACTTCTaGGTGGCAGGGCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: GRGGLSQGTETRGSLEPGPQPDF*VAGPTV
Trigger: CACCGTGGGCCCTGCCACCCAGAAGTCTGGCTGAGG...TCCTGGTTCAAGTGATCCTCTTGTCTCAGTCCCCTGAGACAATCCCCCACGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp CCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGAGCTCACATTTTCCTaGGGTAGAGCGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PRASRRSAGLPTPRFEPRELTFS*GRARCP
Trigger: CGGGCACCTCGCTCTACCCCAGGAAAATGTGAGCTC...CCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR CAA 72 bp TGCTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTaGCTGAGTTGGATGATGTACTCCTTCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CCCSAVLRTRRP*LSWMMYSFTRC
Trigger: GCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR CAA 72 bp ATCTGTGAGCCCAAGTCCAGCGTGATGCTCTCGGCCTaGGCCTGGGCCTGGGAGGTGATCTGGATGATGTCG +
Preference number: 4 (lower is better)
Translates to: ICEPKSSVMLSA*AWAWEVIWMMS
Trigger: CGACATCATCCAGATCACCTCCCAGGCCCAGGCCAAGGCCGAGAGCATCACGCTGGACTTGGGCTCACAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR TCA 90 bp GGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACGTCCTCGGGCTCCGCTaGGCTGGGCTGACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRQERGGLNEVTGKRFNYVLGLR*AGLTLL
Trigger: AAGAAGGGTCAGCCCAGCTCAGCGGAGCCCGAGGAC...GTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CTGCAGGCGAATGATCTCGGCCAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCTGTCTACAGTGGCGATaGTGTTTTCCAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQANDLGQRRESRLQPGRCLQWR*CFPGSP
Trigger: TGGAGACCCTGGAAAACATCATCGCCACTGTAGACA...GCGACCTGGCTGCAGCCTGCTCTCCCTACGCTGGCCGAGATCATTCGCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559406.5
ENST00000560562.5
ENST00000561156.1
CDS-3UTR TCA 90 bp CGTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGTGCTCCGGATGCGCTTaGCCTCACTGTTGGATAGGT +
Preference number: 4 (lower is better)
Translates to: RVYSGDDVFQGLHRGRPACSGCA*PHCWIG
Trigger: ACCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCA...CGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR TCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTTGCTCCGGATGCGCTTaGCCTCACTGTTGGATAGGT +
Preference number: 4 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSCSGCA*PHCWIG
Trigger: ACCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCA...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp GATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTGTGTCCGGGGATCCCTaGGCCTGGCTGCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: DGSSCPHRTCKQTKVCPVVSGDP*AWLHSP
Trigger: GGGAGAGTGCAGCCAGGCTCAGGGATCCCCGGACAC...AACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAGGTACCTGCCAATTCTaGTCCATGGACATCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRGTCQF*SMDIRK
Trigger: CTTCCGGATGTCCATGGAGCAGAATTGGCAGGTACC...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGGTGTCCTGGGGTACCTaGCAATTCTGCTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: AQETREEPRTSAALNSSQVSWGT*QFCSMD
Trigger: GTCCATGGAGCAGAATTGGCAGGTACCCCAGGACAC...CTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGTCTACTCCTTCACCAGGTaGAGGTGCAAGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: RASRRSAGLPTPRFEPRVYSFTR*RCKASM
Trigger: CATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTA...GACCCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp CGTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGTACTCCTTCACCAGGTaGAGGTGCAAGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: RVYSGDDVFQGLHRGRPAYSFTR*RCKASM
Trigger: CATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTA...CGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp ACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCTGCTGGGTGCAGAAGTaGTGGATGGTGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: TVAMMFSRVSTGAAQRVCCWVQK*WMVSAL
Trigger: CAATGCTGACACCATCCAGCACTTCTGCACCCAGCA...GCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp CAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGTGCTGGGTGCAGAAGTaGTGGATGGTGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: QETREEPRTSAALNSSQRCWVQK*WMVSAL
Trigger: CAATGCTGACACCATCCAGCACTTCTGCACCCAGCA...CCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTGCTCCCAGCGGGGTGTaGCCAAGGCTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PQLALKMEEPEVKNYGQPAPSGV*PRLAGH
Trigger: GTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGC...AGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GAGCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAAGAGTCCTTGGTGTTaGCTGGTTGGCTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: EHRRPGRNREPALLLTAPKSPWC*LVGCPG
Trigger: TCCTGGGCAGCCAACCAGGCAACACCAAGGACTCTT...GGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTTGGGGTAGAGCGAGGTaGCCGGCAGGGCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPAWGRAR*PAGQGM
Trigger: CATCCCCTGCCCTGCCGGGCACCTCGCTCTACCCCA...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp AGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGACTCTGCCTCTGATGTaGACTGCAACTTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RRPGRNREPALLLTAPSGTLPLM*TATFGG
Trigger: GCCCCCAAAAGTTGCAGTCCACATCAGAGGCAGAGT...CCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GATCTGGATGATGTCGATGGCCAGCTCGCTGTGGCAGTGGCCGTCCAGCCTCTGCACTGGACAGGAATGTaGCCTCCAGCAGTCGGATCT +
Preference number: 4 (lower is better)
Translates to: DLDDVDGQLAVAVAVQPLHWTGM*PPAVGS
Trigger: AGATCCGACTGCTGGAGGCCACATTCCTGTCCAGTG...CAGAGGCTGGACGGCCACTGCCACAGCGAGCTGGCCATCGACATCATCCAGATC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTCACTGGACAGGAATGTaGCCTCCAGCAGTCGGATCT +
Preference number: 4 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSHWTGM*PPAVGS
Trigger: AGATCCGACTGCTGGAGGCCACATTCCTGTCCAGTG...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCATGGCCGTCCAGCCTCTaGGGAGGCACATCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPWPSSL*GGTSSA
Trigger: GGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCA...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAAGCTCGCTGTGGCAGTaGCCGTCCAGCCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPSSLWQ*PSSLWG
Trigger: TCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCT...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCAGCTCGCTGTGGCAGTaGCCGTCCAGCCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ENSGSLVSTVAMMFSRVSSSLWQ*PSSLWG
Trigger: TCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCT...GGAGACCCTGGAAAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp TCCTTCACCAGGTGCAGGTGCAAGGCCTCCATGAGCTCCTCCCGGAAACAGCCCGCCAATTCTGCTCCATaGACATCCGGAAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: SFTRCRCKASMSSSRKQPANSAP*TSGRTG
Trigger: GCCTGTCCTTCCGGATGTCCATGGAGCAGAATTGGC...GGGCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp AGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCCAATTCTGCTCCATaGACATCCGGAAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: RTSAALNSSQRGVPKACWANSAP*TSGRTG
Trigger: GCCTGTCCTTCCGGATGTCCATGGAGCAGAATTGGC...CCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTGCCAATTCTGCTCCATaGACATCCGGAAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSANSAP*TSGRTG
Trigger: GCCTGTCCTTCCGGATGTCCATGGAGCAGAATTGGC...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCAGAAGTGCTGGATaGTGTCAGCATTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RPGRNREPALLLTAPSGVCRSAG*CQHWPG
Trigger: TCCTGGCCAATGCTGACACCATCCAGCACTTCTGCA...CACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCCGGGGAGCCGTGCTaGGTGCAGAAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPAGEPC*VQKCWM
Trigger: CATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGC...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp TCTACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGAGGATAGCGCTCAGGTaGCCTTTGCTGAAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: STVAMMFSRVSTGAAQRVRIALR*PLLKSG
Trigger: CCCTGACTTCAGCAAAGGCCACCTGAGCGCTATCCT...CACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp CGTGCCTCTAGCTCCAGAGCTCGGTCCATCAACTCCCTCACATTGGCCGCCTCATTGGTGTTGCCTGGTTaGCTGCCCAGGATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RASSSRARSINSLTLAASLVLPG*LPRMGA
Trigger: AGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAA...TGAGGCGGCCAATGTGAGGGAGTTGATGGACCGAGCTCTGGAGCTAGAGGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CCA 90 bp ACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGAACCTCTTGAACAGTaGCTGAGACAGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TVAMMFSRVSTGAAQRVCEPLEQ*LRQERQ
Trigger: CTGCCTCTCCTGTCTCAGCCACTGTTCAAGAGGTTC...GCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561156.1
3UTR CAA 72 bp CTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTaGGATGATGTACTCCTTCACCAGGTGCAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LGRLEDQAPLAE*DDVLLHQVQVQ
Trigger: TTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
3UTR CAA 72 bp GCCCCCATGCTGACGTCCAAGATGCTCCGGATGCGCTaGACCTCACTGTTGGATAGGTTCCCCTTGATGGCC +
Preference number: 4 (lower is better)
Translates to: APMLTSKMLRMR*TSLLDRFPLMA
Trigger: GGCCATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCATCTTGGACGTCAGCATGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR TCA 90 bp GATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCTTCCCCGTCAGGGCTaGTGTCCACACACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: DGSSCPHRTCKQTKVCPVLPRQG*CPHTSR
Trigger: CCGGGAGGTGTGTGGACATCAGCCCTGACGGGGAAG...AACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp TGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTTGGATGATGTACCACCCGCTTTATCTGTaGGCCCAAGTCCAGCGTGAT +
Preference number: 4 (lower is better)
Translates to: CCSAVLRTRRPLLSWMMYHPLYL*AQVQRD
Trigger: ATCACGCTGGACTTGGGCTCACAGATAAAGCGGGTG...GTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR TCA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCATGTCTACAGTGGCGATaGTGTTTTCCAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRNREPALLLTAPSGVCPCLQWR*CFPGSP
Trigger: TGGAGACCCTGGAAAACATCATCGCCACTGTAGACA...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp AGGTCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGATGTCTACAGTGGCGATaGTGTTTTCCAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSVQFQLTGPAPPPGLGRCLQWR*CFPGSP
Trigger: TGGAGACCCTGGAAAACATCATCGCCACTGTAGACA...TCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGGTGCAAGGCCTCCATaGGCTCCTCCCGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPGARPP*APPGNS
Trigger: GCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACC...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp GAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCGGTGCAAGGCCTCCATaGGCTCCTCCCGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: ENSGSLVSTVAMMFSRVSGARPP*APPGNS
Trigger: GCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACC...GGAGACCCTGGAAAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR TCA 90 bp GATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTGGGGAAGGGGGAGCCTaGGAGGACCCAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: DGSSCPHRTCKQTKVCPVGEGGA*EDPGGL
Trigger: AAGACCTCCTGGGTCCTCTCAGGCTCCCCCTTCCCC...AACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGGCCTCTGATGTGGACTaGAACTTTTGGGGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQASDVD*NFWGPL
Trigger: TAGAGGCCCCCAAAAGTTGCAGTCCACATCAGAGGC...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAACGGTCCTCGCGCTCCTaGTCCGCCACCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LALKMEEPEVKNYGQPLKRSSRS*SATTAS
Trigger: GCTGGCCGTGGTGGCGGAGCAGGAGCGCGAGGACCG...TTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp CCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCCAGCCAGCTGCTGCTaGTGCTCGGCCGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PQLALKMEEPEVKNYGQPPASCC*CSAVLR
Trigger: CCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGG...AGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp GAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCTACCCAGCCAGCTGCTaGTGCTGCTCGGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: ENSGSLVSTVAMMFSRVSYPASC*CCSAVL
Trigger: CAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTA...GGAGACCCTGGAAAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTATGTACCCAGCCAGCTaGTGCTGCTGCTCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: RSRALGGAHAEQENELTFMYPAS*CCCSAV
Trigger: GACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACAT...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACATGGCACTGGGGTCCTaGAGGCGAATGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GGRQERGGLNEVTGKRFNMALGS*RRMISA
Trigger: GGCCGAGATCATTCGCCTGCAGGACCCCAGTGCCAT...GTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp CGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGCGCTCCCAGCGGGGTGTaGCCAAGGCTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RAHDQLSFTKSPWCCLVGAPSGV*PRLAGH
Trigger: GTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGC...GCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGCCCAGCTGACAGGGCCTaGACCTCCGCCAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: RAHDQLSFTKSPWCCLVGPADRA*TSARAR
Trigger: CCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGG...GCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GAACAGTGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGTGTTGCCTGGTTGGCTaGCCAGGATGGGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EQWLQVLMQVLEQGVKAVCCLVG*PGWELL
Trigger: CAGGAGCTCCCATCCTGGGCAGCCAACCAGGCAACA...CACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCACTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR GCA 90 bp GGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACGGGATGAACGGAGGGTaGGGTGGGCAGAATAACGGC +
Preference number: 4 (lower is better)
Translates to: GGRQERGGLNEVTGKRFNGMNGG*GGQNNG
Trigger: GCCGTTATTCTGCCCACCGCACCCTCCGTTCATCCC...GTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TTCTCTTCCAGTTCTGTCTTCCATTCCACCATTGCTGAATCCCGCTCACGGCGGCGGAGCGGCGGGGAATaGACGTGTGGAAGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: FSSSSVFHSTIAESRSRRRSGGE*TCGSGG
Trigger: ACCTCCGCTTCCACACGTCCATTCCCCGCCGCTCCG...CCGCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGACAGAACTGGAAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTCGGCTCCTTCAGTCCTaGGCAGGATGTGGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: RSRALGGAHAEQENELTFRLLQS*AGCGRR
Trigger: GCGCCTTCCACATCCTGCCCAGGACTGAAGGAGCCG...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GGGGAGCCTGAGAGGACCCAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGACTCTGCCTCTGATGTaGACTGCAACTTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GEPERTQEVLGPSVVDTKTLPLM*TATFGG
Trigger: GCCCCCAAAAGTTGCAGTCCACATCAGAGGCAGAGT...CTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCTCTCAGGCTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGAGACGCAGAACACATTaGCCAGGCCTTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: QETREEPRTSAALNSSQRRRRTH*PGLWTS
Trigger: AGAAGTCCAAAGGCCTGGCCAATGTGTTCTGCGTCT...CCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CCA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGCCACGGCGGCCAGGTaGGCCGCGAAGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FLACTRSAIVYKESLVLPATAAR*AAKCWW
Trigger: CCACCAGCACTTCGCGGCCCACCTGGCCGCCGTGGC...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTTGGCCGTCCAGCCTCTaGGGAGGCACATCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DGSSCPHRTCKQTKVCPVWPSSL*GGTSSA
Trigger: GGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCA...AACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp ATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCAGCTCGCTGTGGCAGTaGCCGTCCAGCCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: MGAPAPIGHVNKPRSVQFSSLWQ*PSSLWG
Trigger: TCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCT...GAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp TGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTTGGATGATGTACGCCAATTCTGCTCCATaGACATCCGGAAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: CCSAVLRTRRPLLSWMMYANSAP*TSGRTG
Trigger: GCCTGTCCTTCCGGATGTCCATGGAGCAGAATTGGC...GTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp AGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGTCTGCAGAAGTGCTGGATaGTGTCAGCATTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RASRRSAGLPTPRFEPRVCRSAG*CQHWPG
Trigger: TCCTGGCCAATGCTGACACCATCCAGCACTTCTGCA...GACCCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp CTTGCTGAGTTGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCCATGCCGGGGAGCCGTGCTaGGTGCAGAAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: LAELDDVLLHQVQVQGLHAGEPC*VQKCWM
Trigger: CATCCAGCACTTCTGCACCCAGCACGGCTCCCCGGC...ATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp AGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGAGTCAGGGTAGCAGGTaGCATAAGTGGCCACCTCAA +
Preference number: 4 (lower is better)
Translates to: RTSAALNSSQRGVPKACWSQGSR*HKWPPQ
Trigger: TTGAGGTGGCCACTTATGCCACCTGCTACCCTGACT...CCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTGGCAGGGCCCACGGTaGCACCCCCAGGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GSFLACTRSAIVYKESLVWQGPR*HPQGLS
Trigger: GGACAGGCCCTGGGGGTGCCACCGTGGGCCCTGCCA...CACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GAGCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCATACCGGCCACTTCCTaGCCACAGCTTTGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: EHRRPGRNREPALLLTAPIPATS*PQLCKA
Trigger: TGCCTTACAAAGCTGTGGCCAGGAAGTGGCCGGTAT...GGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp ATAGGAAACAAATACAGAGGCCAAAGGGTCAACAGTGAGAGGTCAAGCTTGCCCGCACGGGCGAGGAAGTaGCTCGGCCTGTGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: IGNKYRGQRVNSERSSLPARARK*LGLCRP
Trigger: CGGGCGACACAGGCCGAGTCACTTCCTCGCCCGTGC...GGGCAAGCTTGACCTCTCACTGTTGACCCTTTGGCCTCTGTATTTGTTTCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCATCTTCTTCCCTTTGGTaGAGACGCAGAACACATTGG +
Preference number: 4 (lower is better)
Translates to: GRNREPALLLTAPSGVCPSSSLW*RRRTHW
Trigger: CCAATGTGTTCTGCGTCTTCACCAAAGGGAAGAAGA...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR TCA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGTGTCTACAGTGGCGATaGTGTTTTCCAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RNREPALLLTAPSGVCPRCLQWR*CFPGSP
Trigger: TGGAGACCCTGGAAAACATCATCGCCACTGTAGACA...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp TCCTTCACCAGGTGCAGGTGCAAGGCCTCCATGAGCTCCTCCCGGAAACAGCCCTGTCTACAGTGGCGATaGTGTTTTCCAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SFTRCRCKASMSSSRKQPCLQWR*CFPGSP
Trigger: TGGAGACCCTGGAAAACATCATCGCCACTGTAGACA...GGGCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR TCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTGGTGCAAGGCCTCCATaGGCTCCTCCCGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPAGARPP*APPGNS
Trigger: GCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACC...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp CTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAGCTGCTCGGCCGTCTTaGGGACCAGGCGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LALKMEEPEVKNYGQPLKAARPS*GPGAPC
Trigger: GCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGC...TTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp GAACAGTGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGTGGCCACCTCAATCTTaGTGGCACTGGGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: EQWLQVLMQVLEQGVKAVWPPQS*WHWGPA
Trigger: TGCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCA...CACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCACTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR TCA 90 bp CGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGCCCTGCGCCCCCATGCTaGCGTCCAAGATGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: RAHDQLSFTKSPWCCLVGPAPPC*RPRCSG
Trigger: TCCGGAGCATCTTGGACGTCAGCATGGGGGCGCAGG...GCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp TCCACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCACGGCAGGGCAGGGGATaGACGGAGGGTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: STKFVETCHGNRKQIQRPRQGRG*TEGAVG
Trigger: GCCCACCGCACCCTCCGTTCATCCCCTGCCCTGCCG...TGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTGGGCCATCCAGCCCCTaGCTGGACCCGGCTGCGTCC +
Preference number: 4 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCGPSSP*LDPAAS
Trigger: GGACGCAGCCGGGTCCAGGCAGGGGCTGGATGGCCC...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCTCTTGAGCTCACCCAGGGTCCTCCTTCATGGTaGGGCCCAAGTGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LMQVLEQGVKAVALELTQGPPSW*GPSAER
Trigger: TCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACC...CTGGGTGAGCTCAAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR GCA 90 bp GCAGGTGGCATAAGTGGCCACCTCAATCTTGATGGCACTGGGGTCCTGCAGGCGGGTACCTGCCAATTCTaGTCCATGGACATCCGGAAG +
Preference number: 4 (lower is better)
Translates to: AGGISGHLNLDGTGVLQAGTCQF*SMDIRK
Trigger: CTTCCGGATGTCCATGGAGCAGAATTGGCAGGTACC...CGCCTGCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCACTTATGCCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR GCA 90 bp CTGCTGCTCGGCCGTCTTGAGGACCAGGCGCCCCTTGCTGAGTTGGATGATGTAGGTACCTGCCAATTCTaGTCCATGGACATCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LLLGRLEDQAPLAELDDVGTCQF*SMDIRK
Trigger: CTTCCGGATGTCCATGGAGCAGAATTGGCAGGTACC...TACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp CCCTGCAGCTCTGAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGT +
Preference number: 4 (lower is better)
Translates to: PCSSENSGSLVSTVAMMFAAQRV*VNLLNS
Trigger: ACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGC...AAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTCAGAGCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559406.5
ENST00000560562.5
ENST00000561156.1
CDS-3UTR GCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCATGTTGCCTGGTTGGCTaGCCAGGATGGGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPCCLVG*PGWELL
Trigger: CAGGAGCTCCCATCCTGGGCAGCCAACCAGGCAACA...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CGGCCTCCCAAAGATGTCCACGTGACAGTCCCCAGAGCCTGTGACTATGTTAGGATCCCTGAGCCTGGCTaGACTCTCCCTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RPPKDVHVTVPRACDYVRIPEPG*TLPPGS
Trigger: AGAACCAGGAGGGAGAGTGCAGCCAGGCTCAGGGAT...CCTAACATAGTCACAGGCTCTGGGGACTGTCACGTGGACATCTTTGGGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp CTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAACCCAGGGCCTGTCCCTaGCTTGGGGAAGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LALKMEEPEVKNYGQPLKPRACP*LGEGGA
Trigger: GGCTCCCCCTTCCCCAAGGCAGGGACAGGCCCTGGG...TTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp TTCTCTTCCAGTTCTGTCTTCCATTCCACCATTGCTGAATCCCGCTCACGGCGGAGGTCAAGCTTGCCCTaGCCCTGCCCAGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: FSSSSVFHSTIAESRSRRRSSLP*PCPDLS
Trigger: GCTGAGGTCTGGGCAGGGGCAGGGCAAGCTTGACCT...CCGCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGACAGAACTGGAAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GGGCGTGGGGGATTGTCTCAGGGGACTGAGACAAGAGGATCACTTGAACCAGGACGGGGAATGGACGTGTaGAAGCGGAGGTCACTTACC +
Preference number: 4 (lower is better)
Translates to: GRGGLSQGTETRGSLEPGRGMDV*KRRSLT
Trigger: GGTAAGTGACCTCCGCTTCCACACGTCCATTCCCCG...TCCTGGTTCAAGTGATCCTCTTGTCTCAGTCCCCTGAGACAATCCCCCACGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTCTCCCGGGAGCTCGCTaGGCCCGGCTCCTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVLPGAR*ARLLQS
Trigger: GGACTGAAGGAGCCGGGCCCAGCGAGCTCCCGGGAG...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAAGGAGGCCTCCGACATaGAGGCCTCTGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPRRPPT*RPLTLP
Trigger: AGGCAGAGTCAGAGGCCTCCATGTCGGAGGCCTCCT...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CCA 90 bp CGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTAGACGCAGAACACATTaGCCAGGCCTTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: REPALLLTAPSGVCPRLARRRTH*PGLWTS
Trigger: AGAAGTCCAAAGGCCTGGCCAATGTGTTCTGCGTCT...AGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GAACAGTGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCCTGGGAGGTGATCTaGATGATGTCGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EQWLQVLMQVLEQGVKAVAWEVI*MMSMAS
Trigger: GCTGGCCATCGACATCATCCAGATCACCTCCCAGGC...CACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCACTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp CGCCCCTTGCTGAGTTGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCCTCATGCAGGTTCTaGAGCAGGGTGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: RPLLSWMMYSFTRCRCKASSCRF*SRVSKP
Trigger: CGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGA...GGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp GGGCGTGGGGGATTGTCTCAGGGGACTGAGACAAGAGGATCACTTGAACCAGGATTGGTGTTGCCTGGTTaGCTGCCCAGGATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GRGGLSQGTETRGSLEPGLVLPG*LPRMGA
Trigger: AGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAA...TCCTGGTTCAAGTGATCCTCTTGTCTCAGTCCCCTGAGACAATCCCCCACGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGTCAACTCCCTCACATTaGCTTGGGGTAGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RNREPALLLTAPSGVCPRSTPSH*LGVEVL
Trigger: CAGAACCTCTACCCCAAGCCAATGTGAGGGAGTTGA...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560670.5
3UTR CAA 72 bp CGGATGCGCTTGACCTCACTGTTGGATAGGTTCCCCTaGATGGCCAGGATAGCGCTCAGGTGGCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RMRLTSLLDRFP*MARIALRWPLL
Trigger: CAGCAAAGGCCACCTGAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCGCATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR TCA 90 bp GATCTGGATGATGTCGATGGCCAGCTCGCTGTGGCAGTGGCCGTCCAGCCTCTGTCTTCTTCCCTTTGGTaGAGACGCAGAACACATTGG +
Preference number: 4 (lower is better)
Translates to: DLDDVDGQLAVAVAVQPLSSSLW*RRRTHW
Trigger: CCAATGTGTTCTGCGTCTTCACCAAAGGGAAGAAGA...CAGAGGCTGGACGGCCACTGCCACAGCGAGCTGGCCATCGACATCATCCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560562.5
CDS-3UTR TCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTGCTGCTCGGCCGTCTTaGGGACCAGGCGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCAARPS*GPGAPC
Trigger: GCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGC...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp GGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACTGGCCACCTCAATCTTaGTGGCACTGGGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRQERGGLNEVTGKRFNYWPPQS*WHWGPA
Trigger: TGCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCA...GTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp GGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTGCTCCGGATGCGCTTaGCCTCACTGTTGGATAGGT +
Preference number: 4 (lower is better)
Translates to: GGRQERGGLNEVTGKRFNCSGCA*PHCWIG
Trigger: ACCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCA...GTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAACCCACAGCTGGCTCTaGAGATGGAGGAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPTHSWL*RWRSLK
Trigger: CTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGGGT...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp AGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACCCAGGCTGCAGTGAGCCTTaGTGCCATGACCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: RQERGGLNEVTGKRFNYPGCSEP*CHDQAT
Trigger: AGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCC...TGGGTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp GGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACGACCTGGGGCCTTTCTaGTGTAATGGAGGGGAGACC +
Preference number: 4 (lower is better)
Translates to: GRQERGGLNEVTGKRFNYDLGPF*CNGGET
Trigger: GGTCTCCCCTCCATTACAGCAGAAAGGCCCCAGGTC...GTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GGGTACCTGCCAATTCTGCTCCATGGACATCCGGAAGGACAGGCAGTTGTTGATATGGTGCGGCCCAAGTaGAGAAAGACGCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GYLPILLHGHPEGQAVVDMVRPK*RKTLSG
Trigger: CCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCAT...ATCAACAACTGCCTGTCCTTCCGGATGTCCATGGAGCAGAATTGGCAGGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR GCA 90 bp AGTTGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCCATGAGCTCCGGCTTCAGGTCCTCATaGAGGTTCTGGAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SWMMYSFTRCRCKASMSSGFRSS*RFWSRV
Trigger: CACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCC...GGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTTTCACCAGGTGCAGGTaGAAGGCCTCCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSRALGGAHAEQENELTFFTRCR*KASMSS
Trigger: GGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAA...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCCATGAGCTCCTCCCGGAAACATGCTGGGTGCAGAAGTaGTGGATGGTGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: VLLHQVQVQGLHELLPETCWVQK*WMVSAL
Trigger: CAATGCTGACACCATCCAGCACTTCTGCACCCAGCA...TGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp GATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTATGGCACTGGGGTCCTaGAGGCGAATGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: DGSSCPHRTCKQTKVCPVMALGS*RRMISA
Trigger: GGCCGAGATCATTCGCCTGCAGGACCCCAGTGCCAT...AACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GTTGGCAATAACATTGGCCCTGTAATTCGTCAGCTGCTTGCCTCTCTCCAGAAAGCTCCCAGCGGGGTGTaGCCAAGGCTTGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VGNNIGPVIRQLLASLQKAPSGV*PRLAGH
Trigger: GTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGC...TTTCTGGAGAGAGGCAAGCAGCTGACGAATTACAGGGCCAATGTTATTGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR GCA 90 bp AGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCTCTTGAGCTCACAGGATGGGAGCTCCTaGCCCCATCGGACATGTAAA +
Preference number: 4 (lower is better)
Translates to: RSSCRFWSRVSKPWLLSSQDGSS*PHRTCK
Trigger: TTTACATGTCCGATGGGGGCAGGAGCTCCCATCCTG...TGAGCTCAAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR GCA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGGGTTCTTTCCTTGCGTaGACACGATCAGCTATCGTT +
Preference number: 4 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQGSFLA*TRSAIV
Trigger: AACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGGTTCTTTCCTTGCGTaGACACGATCAGCTATCGTT +
Preference number: 4 (lower is better)
Translates to: RTSAALNSSQRGVPKACWGSFLA*TRSAIV
Trigger: AACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC...CCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGTTCTTTCCTTGCGTaGACACGATCAGCTATCGTT +
Preference number: 4 (lower is better)
Translates to: REPALLLTAPSGVCPRLAGSFLA*TRSAIV
Trigger: AACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC...AGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTGGGATGAACGGAGGGTaGGGTGGGCAGAATAACGGC +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPAGMNGG*GGQNNG
Trigger: GCCGTTATTCTGCCCACCGCACCCTCCGTTCATCCC...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp CGGCCTCCCAAAGATGTCCACGTGACAGTCCCCAGAGCCTGTGACTATGTTAGGCTTAGGGGGAGCACATaGCGAGCAGGAAAACGAGCT +
Preference number: 4 (lower is better)
Translates to: RPPKDVHVTVPRACDYVRLRGST*RAGKRA
Trigger: AGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAG...CCTAACATAGTCACAGGCTCTGGGGACTGTCACGTGGACATCTTTGGGAGGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCACGGGGAATGGACGTGTaGAAGCGGAGGTCACTTACC +
Preference number: 4 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPRGMDV*KRRSLT
Trigger: GGTAAGTGACCTCCGCTTCCACACGTCCATTCCCCG...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TTCTCTTCCAGTTCTGTCTTCCATTCCACCATTGCTGAATCCCGCTCACGGCGGCGGGCTCCGCTGAGCTaGGCTGACCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSSSSVFHSTIAESRSRRRAPLS*ADPSSS
Trigger: AGAAGAAGAAGGGTCAGCCCAGCTCAGCGGAGCCCG...CCGCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGACAGAACTGGAAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TGCAGCTCTGAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTTCCCGGGCTCCGCTGAGCTaGGCTGACCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CSSENSGSLVSTVAMMFSRAPLS*ADPSSS
Trigger: AGAAGAAGAAGGGTCAGCCCAGCTCAGCGGAGCCCG...GGAAAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTCAGAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560562.5
CDS-3UTR CCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTCATCCAGCCCCTGCCTaGACCCGGCTGCGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCHPAPA*TRLRPR
Trigger: CCGAGGACGCAGCCGGGTCCAGGCAGGGGCTGGATG...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CCA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGCCTCCACCTTGCTCTaGCGCCGCACCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLACTRSAIVYKESLVLPASTLL*RRTSSS
Trigger: GGAGGAGCTGGTGCGGCGCCAGAGCAAGGTGGAGGC...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CTTGAGGACCAGGCGCCCCTTGCTGAGTTGGATGATGTACTCCTTCACCAGGTGTCCTCATGCAGGTTCTaGAGCAGGGTGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: LEDQAPLAELDDVLLHQVSSCRF*SRVSKP
Trigger: CGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGA...CACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp TCTACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTTTACAAAGAGTCCTTaGTGTTGCCTGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: STVAMMFSRVSTGAAQRVFTKSP*CCLVGC
Trigger: GCAGCCAACCAGGCAACACCAAGGACTCTTTGTAAA...CACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp AGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGTTTACAAAGAGTCCTTaGTGTTGCCTGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RTSAALNSSQRGVPKACWFTKSP*CCLVGC
Trigger: GCAGCCAACCAGGCAACACCAAGGACTCTTTGTAAA...CCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGTTGGCAGGGCCCACGGTaGCACCCCCAGGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KFVETCHGNRKQIQRPKGWQGPR*HPQGLS
Trigger: GGACAGGCCCTGGGGGTGCCACCGTGGGCCCTGCCA...ACCCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp CCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGACAGAGAGGTTACACAGCCAGTaGGAACTAAAGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: PPTRRTVMRPTVEGLWTERLHSQ*ELKLQM
Trigger: CATCTGCAACTTTAGTTCCCACTGGCTGTGTAACCT...CTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR CAA 72 bp ACGTCCAAGATGCTCCGGATGCGCTTGACCTCACTGTaGGATAGGTTCCCCTTGATGGCCAGGATAGCGCTC +
Preference number: 4 (lower is better)
Translates to: TSKMLRMRLTSL*DRFPLMARIAL
Trigger: GAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCATCTTGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR TCA 90 bp CTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAGCACCCATCCCCCGATaGGGACACCCGGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: LKMEEPEVKNYGQPLKMKAPIPR*GHPGTG
Trigger: GCCCGTGCCCGGGTGTCCTCATCGGGGGATGGGTGC...TTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp AAAGATGTCCACGTGACAGTCCCCAGAGCCTGTGACTATGTTAGGTTACACAGCAGCCCAAGTCCAGCGTaGTGCTCTCGGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KDVHVTVPRACDYVRLHSSPSPA*CSRPWP
Trigger: AGGCCAAGGCCGAGAGCATCACGCTGGACTTGGGCT...GCTGTGTAACCTAACATAGTCACAGGCTCTGGGGACTGTCACGTGGACATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp GGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACCACCCGCTTTATCTGTaGGCCCAAGTCCAGCGTGAT +
Preference number: 4 (lower is better)
Translates to: GRQERGGLNEVTGKRFNYHPLYL*AQVQRD
Trigger: ATCACGCTGGACTTGGGCTCACAGATAAAGCGGGTG...GTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTTCAGGTGGCCTTTGCTaGAGTCAGGGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PQLALKMEEPEVKNYGQPSGGLC*SQGSRW
Trigger: CCACCTGCTACCCTGACTTCAGCAAAGGCCACCTGA...AGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTTCAGGTGGCCTTTGCTaGAGTCAGGGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPASGGLC*SQGSRW
Trigger: CCACCTGCTACCCTGACTTCAGCAAAGGCCACCTGA...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTGACAAGAGGATCACTTaGACCAGGAGGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSRALGGAHAEQENELTFDKRIT*TRRSRL
Trigger: CAGCCTGGACCTCCTGGTTCAAGTGATCCTCTTGTC...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAACGGCAGGGCAGGGGATaGACGGAGGGTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LKMEEPEVKNYGQPLKMKRQGRG*TEGAVG
Trigger: GCCCACCGCACCCTCCGTTCATCCCCTGCCCTGCCG...TTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp ACGTACAAAGACCTTGGGCATCCTTTATACCGGCCACTTCCTGGCCACAGCTTTAGGCATCAGCCGGGCTaGGTCATGCCTGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: TYKDLGHPLYRPLPGHSFRHQPG*VMPESE
Trigger: TTCGGACTCAGGCATGACTCAGCCCGGCTGATGCCT...AAAGCTGTGGCCAGGAAGTGGCCGGTATAAAGGATGCCCAAGGTCTTTGTACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GAACAGTGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGGTACCTGCCAATTCTaGTCCATGGACATCCGGAAG +
Preference number: 4 (lower is better)
Translates to: EQWLQVLMQVLEQGVKAVGTCQF*SMDIRK
Trigger: CTTCCGGATGTCCATGGAGCAGAATTGGCAGGTACC...CACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCACTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR GCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTGGCTTCAGGTCCTCATaGAGGTTCTGGAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPAGFRSS*RFWSRV
Trigger: CACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCC...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTGGCTTCAGGTCCTCATaGAGGTTCTGGAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: DGSSCPHRTCKQTKVCPVGFRSS*RFWSRV
Trigger: CACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCC...AACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGCGCCGCCCAGCGGGTGTaGGTGAACCTCTTGAACAGT +
Preference number: 4 (lower is better)
Translates to: RAHDQLSFTKSPWCCLVGAAQRV*VNLLNS
Trigger: ACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGC...GCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp TGCAGCTCTGAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTTCCTTCACCAGGTGCAGGTaGAAGGCCTCCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CSSENSGSLVSTVAMMFSFTRCR*KASMSS
Trigger: GGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAA...GGAAAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTCAGAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR GCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTGTAGGGAGAGCAGGCTaGAGCCAGGTCGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCVGRAG*SQVAGE
Trigger: CTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTAC...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTCAGGATGGGAGCTCCTaGCCCCATCGGACATGTAAA +
Preference number: 4 (lower is better)
Translates to: RSRALGGAHAEQENELTFQDGSS*PHRTCK
Trigger: TTTACATGTCCGATGGGGGCAGGAGCTCCCATCCTG...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GTAGTAGACACCAAGCCCTCGGGGGACCACCCTCTAGTTGAGGCCTTGGGGGATTCCTGGTTCTTTCCTTaGGTGCACACGATCAGCTAT +
Preference number: 4 (lower is better)
Translates to: VVDTKPSGDHPLVEALGDSWFFP*VHTISY
Trigger: ATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGA...ATCCCCCAAGGCCTCAACTAGAGGGTGGTCCCCCGAGGGCTTGGTGTCTACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGAGGCCTGCAGGCTCCTaGCTCGCCTTCCCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSLWKPVTAIGNKYRGQRRPAGS*LAFPVR
Trigger: CCTGACGGGGAAGGCGAGCCAGGAGCCTGCAGGCCT...CCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GAACAGTGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGACTCTGCCTCTGATGTaGACTGCAACTTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: EQWLQVLMQVLEQGVKAVTLPLM*TATFGG
Trigger: GCCCCCAAAAGTTGCAGTCCACATCAGAGGCAGAGT...CACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCACTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTCCCAGCCTCCAGGGGTaGCACCAGGTCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVPSLQG*HQVLRG
Trigger: TCCTCTGAGGACCTGGTGCCACCCCTGGAGGCTGGG...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTTGGCCGTCCAGCCTCTaGGGAGGCACATCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVWPSSL*GGTSSA
Trigger: GGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCA...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTAGCTCGCTGTGGCAGTaGCCGTCCAGCCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVSSLWQ*PSSLWG
Trigger: TCCCCAGAGGCTGGACGGCCACTGCCACAGCGAGCT...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTCTCTCGGCCTTGGCCTaGGCCTGGGAGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVLSALA*AWEVIW
Trigger: CCAGATCACCTCCCAGGCCCAGGCCAAGGCCGAGAG...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTAGGCTCAGGGTGTCCTaGGGTACCTGCCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPARLRVS*GTCQFC
Trigger: GCAGAATTGGCAGGTACCCCAGGACACCCTGAGCCT...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCTCCTCATGCAGGTTCTaGAGCAGGGTGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: ENSGSLVSTVAMMFSRVSSSCRF*SRVSKP
Trigger: CGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGA...GGAGACCCTGGAAAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559406.5
ENST00000560562.5
ENST00000561156.1
CDS-3UTR CCA 90 bp TGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCTCTTTGCAGAAGTGCTGGATaGTGTCAGCATTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WLQVLMQVLEQGVKAVALCRSAG*CQHWPG
Trigger: TCCTGGCCAATGCTGACACCATCCAGCACTTCTGCA...AAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CCA 90 bp CCCTGCAGCTCTGAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTTGGGTGCAGAAGTGCTaGATGGTGTCAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: PCSSENSGSLVSTVAMMFWVQKC*MVSALA
Trigger: GGCCAATGCTGACACCATCCAGCACTTCTGCACCCA...AAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTCAGAGCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp GGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACAGGATAGCGCTCAGGTaGCCTTTGCTGAAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRQERGGLNEVTGKRFNYRIALR*PLLKSG
Trigger: CCCTGACTTCAGCAAAGGCCACCTGAGCGCTATCCT...GTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTTTGGTGTTGCCTGGTTaGCTGCCCAGGATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPALVLPG*LPRMGA
Trigger: AGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAA...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp ATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCTTGGTGTTGCCTGGTTaGCTGCCCAGGATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: MGAPAPIGHVNKPRSVQFLVLPG*LPRMGA
Trigger: AGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAA...GAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTAGCCAGACTTCTGGGTaGCAGGGCCCACGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVSQTSG*QGPRWH
Trigger: GTGCCACCGTGGGCCCTGCCACCCAGAAGTCTGGCT...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGAGGTTACACAGCCAGTaGGAACTAAAGTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQRLHSQ*ELKLQM
Trigger: CATCTGCAACTTTAGTTCCCACTGGCTGTGTAACCT...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTGTCCTCGGGCTCCGCTaGGCTGGGCTGACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCVLGLR*AGLTLL
Trigger: AAGAAGGGTCAGCCCAGCTCAGCGGAGCCCGAGGAC...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR TCA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTAGCCCAAGTCCAGCGTaGTGCTCTCGGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FLACTRSAIVYKESLVLPSPSPA*CSRPWP
Trigger: AGGCCAAGGCCGAGAGCATCACGCTGGACTTGGGCT...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTCAAAGCCGTGGCTCTTaGGCTCACCCAGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCQSRGS*AHPGGP
Trigger: TGGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTG...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGTGCAAGGCCTCCATaGGCTCCTCCCGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVGARPP*APPGNS
Trigger: GCTGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACC...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTCCATTCCACCATTGCTaGATCCCGCTCACGGCGGCC +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVPFHHC*IPLTAA
Trigger: GGCCGCCGTGAGCGGGATTCAGCAATGGTGGAATGG...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGCCCCCTCTCAGGCTaGGAAGGAACTTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVGPLSG*EGTFRP
Trigger: GGGCCTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCC...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTGTGTCCTGGGGTACCTaGCAATTCTGCTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPAVSWGT*QFCSMD
Trigger: GTCCATGGAGCAGAATTGGCAGGTACCCCAGGACAC...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp ATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCTACTCCTTCACCAGGTaGAGGTGCAAGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: MGAPAPIGHVNKPRSVQFYSFTR*RCKASM
Trigger: CATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTA...GAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp TCCACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAGCCAGCTGCTGCTGCTaGTCGGCCGTCTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: STKFVETCHGNRKQIQRPASCCC*SAVLRT
Trigger: GGTCCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGC...TGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTCCAGCCAGCTGCTGCTaGTGCTCGGCCGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCPASCC*CSAVLR
Trigger: CCTCAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGG...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTACCCAGCCAGCTGCTaGTGCTGCTCGGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: GSFLACTRSAIVYKESLVYPASC*CCSAVL
Trigger: CAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTA...CACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGATTCAACTACCCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATATGTACCCAGCCAGCTaGTGCTGCTGCTCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: RFNYPQLALKMEEPEVKNMYPAS*CCCSAV
Trigger: GACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACAT...ATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGGGTAGTTGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTATGTACCCAGCCAGCTaGTGCTGCTGCTCGGCCGTC +
Preference number: 4 (lower is better)
Translates to: FLACTRSAIVYKESLVLPMYPAS*CCCSAV
Trigger: GACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTACAT...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGTCCAGCTGACAGGGCCTaGACCTCCGCCAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: KFVETCHGNRKQIQRPKGPADRA*TSARAR
Trigger: CCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGG...ACCCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp CCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCAGGATGGGAGCTCCTaGCCCCATCGGACATGTAAA +
Preference number: 4 (lower is better)
Translates to: PQLALKMEEPEVKNYGQPQDGSS*PHRTCK
Trigger: TTTACATGTCCGATGGGGGCAGGAGCTCCCATCCTG...AGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTCAGGATGGGAGCTCCTaGCCCCATCGGACATGTAAA +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPAQDGSS*PHRTCK
Trigger: TTTACATGTCCGATGGGGGCAGGAGCTCCCATCCTG...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp TTCTCTTCCAGTTCTGTCTTCCATTCCACCATTGCTGAATCCCGCTCACGGCGGAAGAGTCCTTGGTGTTaGCTGGTTGGCTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FSSSSVFHSTIAESRSRRKSPWC*LVGCPG
Trigger: TCCTGGGCAGCCAACCAGGCAACACCAAGGACTCTT...CCGCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGACAGAACTGGAAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTCGGCTCCTTCAGTCCTaGGCAGGATGTGGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: FLACTRSAIVYKESLVLPRLLQS*AGCGRR
Trigger: GCGCCTTCCACATCCTGCCCAGGACTGAAGGAGCCG...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCCGCCCCTTGCTGAGTTaGATGATGTACTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: ENSGSLVSTVAMMFSRVSRPLLS*MMYSFT
Trigger: GGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCG...GGAGACCCTGGAAAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp CTTGCTGAGTTGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCCATGGATGGTGTCAGCATTaGCCAGGATGTACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LAELDDVLLHQVQVQGLHGWCQH*PGCTQP
Trigger: TGGCTGGGTACATCCTGGCCAATGCTGACACCATCC...ATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp CCCTGCAGCTCTGAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTTGCAGAAGTGCTGGATaGTGTCAGCATTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PCSSENSGSLVSTVAMMFCRSAG*CQHWPG
Trigger: TCCTGGCCAATGCTGACACCATCCAGCACTTCTGCA...AAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTCAGAGCTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CCA 90 bp CCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTTGGGTGCAGAAGTGCTaGATGGTGTCAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: PQLALKMEEPEVKNYGQPWVQKC*MVSALA
Trigger: GGCCAATGCTGACACCATCCAGCACTTCTGCACCCA...AGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp CCCTGCAGCTCTGAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTAGTCAGGGTAGCAGGTaGCATAAGTGGCCACCTCAA +
Preference number: 4 (lower is better)
Translates to: PCSSENSGSLVSTVAMMFSQGSR*HKWPPQ
Trigger: TTGAGGTGGCCACTTATGCCACCTGCTACCCTGACT...AAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTCAGAGCTGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp ATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCAGGATAGCGCTCAGGTaGCCTTTGCTGAAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: MGAPAPIGHVNKPRSVQFRIALR*PLLKSG
Trigger: CCCTGACTTCAGCAAAGGCCACCTGAGCGCTATCCT...GAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCTGCACTCTCCCTCCTaGTTCTTTCCTTGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: DGSSCPHRTCKQTKVCPVLHSPS*FFPCVH
Trigger: GTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAG...AACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGCCTCAGCCAGACTTCTaGGTGGCAGGGCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: RSLWKPVTAIGNKYRGQRPQPDF*VAGPTV
Trigger: CACCGTGGGCCCTGCCACCCAGAAGTCTGGCTGAGG...CCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp CGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGCCACCCGCTTTATCTGTaGGCCCAAGTCCAGCGTGAT +
Preference number: 4 (lower is better)
Translates to: RAHDQLSFTKSPWCCLVGHPLYL*AQVQRD
Trigger: ATCACGCTGGACTTGGGCTCACAGATAAAGCGGGTG...GCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp ACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGCTGTCTCCAGAGAGCTaGAGAGGGCCCTCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TKFVETCHGNRKQIQRPKLSPES*RGPSAP
Trigger: TGGGGCCGAGGGCCCTCTTCAGCTCTCTGGAGACAG...CTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp ACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGGCTGAGTCATGCCTaGGTCCGAAGGGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: TKFVETCHGNRKQIQRPKGLSHA*VRRAPS
Trigger: AGAGGGGGCCCTTCGGACTCAGGCATGACTCAGCCC...CTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp CTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGGTGCGGCCCAAGTaGAGAAAGACGCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LALKMEEPEVKNYGQPLKMVRPK*RKTLSG
Trigger: CCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCAT...TTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp ACGTACAAAGACCTTGGGCATCCTTTATACCGGCCACTTCCTGGCCACAGCTTTGGTCCTCCTTCATGGTaGGGCCCAAGTGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TYKDLGHPLYRPLPGHSFGPPSW*GPSAER
Trigger: TCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACC...AAAGCTGTGGCCAGGAAGTGGCCGGTATAAAGGATGCCCAAGGTCTTTGTACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTGGTACCTGCCAATTCTaGTCCATGGACATCCGGAAG +
Preference number: 4 (lower is better)
Translates to: DGSSCPHRTCKQTKVCPVGTCQF*SMDIRK
Trigger: CTTCCGGATGTCCATGGAGCAGAATTGGCAGGTACC...AACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGCTACTCCTTCACCAGGTaGAGGTGCAAGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: RAHDQLSFTKSPWCCLVGYSFTR*RCKASM
Trigger: CATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTA...GCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTACCCAGCCAGCTGCTaGTGCTGCTCGGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCYPASC*CCSAVL
Trigger: CAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTA...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp ATAGGAAACAAATACAGAGGCCAAAGGGTCAACAGTGAGAGGTCAAGCTTGCCCATGGCACTGGGGTCCTaGAGGCGAATGATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: IGNKYRGQRVNSERSSLPMALGS*RRMISA
Trigger: GGCCGAGATCATTCGCCTGCAGGACCCCAGTGCCAT...GGGCAAGCTTGACCTCTCACTGTTGACCCTTTGGCCTCTGTATTTGTTTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp ATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCGACCCTAAAAGCCCCTaGCAGACGAGAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: MGAPAPIGHVNKPRSVQFDPKSP*QTRAHL
Trigger: AAGATGAGCTCTCGTCTGGCAGGGGCTTTTAGGGTC...GAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CTCCTGGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTCGGGCTCCGCTGAGCTaGGCTGACCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLVLSLRAHDQLSFTKSPRAPLS*ADPSSS
Trigger: AGAAGAAGAAGGGTCAGCCCAGCTCAGCGGAGCCCG...AGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAATCAGCTCCTCCACTGTaGGGGGCGGGCCATCCAGCC +
Preference number: 4 (lower is better)
Translates to: LKMEEPEVKNYGQPLKMKSAPPL*GAGHPA
Trigger: GGCTGGATGGCCCGCCCCCCACAGTGGAGGAGCTGA...TTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp ACGTACAAAGACCTTGGGCATCCTTTATACCGGCCACTTCCTGGCCACAGCTTTTCCTCATGCAGGTTCTaGAGCAGGGTGTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: TYKDLGHPLYRPLPGHSFSSCRF*SRVSKP
Trigger: CGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGA...AAAGCTGTGGCCAGGAAGTGGCCGGTATAAAGGATGCCCAAGGTCTTTGTACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTCGCCCCTTGCTGAGTTaGATGATGTACTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPARPLLS*MMYSFT
Trigger: GGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCG...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTTGCAGAAGTGCTGGATaGTGTCAGCATTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPACRSAG*CQHWPG
Trigger: TCCTGGCCAATGCTGACACCATCCAGCACTTCTGCA...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGTGCCCAAGGCTTGCTaGGCACTCACAGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: FLACTRSAIVYKESLVLPVPKAC*ALTGRS
Trigger: TGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCAC...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp CGGCCTCCCAAAGATGTCCACGTGACAGTCCCCAGAGCCTGTGACTATGTTAGGTTTACAAAGAGTCCTTaGTGTTGCCTGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RPPKDVHVTVPRACDYVRFTKSP*CCLVGC
Trigger: GCAGCCAACCAGGCAACACCAAGGACTCTTTGTAAA...CCTAACATAGTCACAGGCTCTGGGGACTGTCACGTGGACATCTTTGGGAGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGCCTGCACTCTCCCTCCTaGTTCTTTCCTTGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: RAHDQLSFTKSPWCCLVGLHSPS*FFPCVH
Trigger: GTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAG...GCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp ATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCATACCGGCCACTTCCTaGCCACAGCTTTGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: MGAPAPIGHVNKPRSVQFIPATS*PQLCKA
Trigger: TGCCTTACAAAGCTGTGGCCAGGAAGTGGCCGGTAT...GAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp GAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAAGGCCAGAAATGCAAAGCCGTGGCTCTTaGGCTCACCCAGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: EPEVKNYGQPLKMKRPEMQSRGS*AHPGGP
Trigger: TGGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTG...CATTTCTGGCCTTTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp AGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACCCATGTCTACAGTGGCGATaGTGTTTTCCAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RQERGGLNEVTGKRFNYPCLQWR*CFPGSP
Trigger: TGGAGACCCTGGAAAACATCATCGCCACTGTAGACA...TGGGTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp GGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTCAGGTGGCCTTTGCTaGAGTCAGGGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSFLACTRSAIVYKESLVSGGLC*SQGSRW
Trigger: CCACCTGCTACCCTGACTTCAGCAAAGGCCACCTGA...CACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR TCA 90 bp ACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGGGCCACCTGGATGTaGCGTCTAATGCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: TKFVETCHGNRKQIQRPKGATWM*RLMLAV
Trigger: CACCGCCAGCATTAGACGTCACATCCAGGTGGCCCC...CTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp GAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAAGGCCAGAAATGGGGGAAGGGGGAGCCTaGGAGGACCCAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: EPEVKNYGQPLKMKRPEMGEGGA*EDPGGL
Trigger: AAGACCTCCTGGGTCCTCTCAGGCTCCCCCTTCCCC...CATTTCTGGCCTTTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp CTCCTGGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTACCCACAGCTGGCTCTaGAGATGGAGGAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LLVLSLRAHDQLSFTKSPTHSWL*RWRSLK
Trigger: CTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGGGT...AGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp ATAGGAAACAAATACAGAGGCCAAAGGGTCAACAGTGAGAGGTCAAGCTTGCCCACCCACAGCTGGCTCTaGAGATGGAGGAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: IGNKYRGQRVNSERSSLPTHSWL*RWRSLK
Trigger: CTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGGGT...GGGCAAGCTTGACCTCTCACTGTTGACCCTTTGGCCTCTGTATTTGTTTCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp GGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACAGGTGGCTAATCAGCTaGCCTGAAAATAGAAAGACG +
Preference number: 4 (lower is better)
Translates to: GGRQERGGLNEVTGKRFNRWLIS*PENRKT
Trigger: CGTCTTTCTATTTTCAGGTCAGCTGATTAGCCACCT...GTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp GGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGGACCTGGGGCCTTTCTaGTGTAATGGAGGGGAGACC +
Preference number: 4 (lower is better)
Translates to: GSFLACTRSAIVYKESLVDLGPF*CNGGET
Trigger: GGTCTCCCCTCCATTACAGCAGAAAGGCCCCAGGTC...CACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp CGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGCGGTACCTGCCAATTCTaGTCCATGGACATCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RAHDQLSFTKSPWCCLVGGTCQF*SMDIRK
Trigger: CTTCCGGATGTCCATGGAGCAGAATTGGCAGGTACC...GCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTTTCACCAGGTGCAGGTaGAAGGCCTCCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLACTRSAIVYKESLVLPFTRCR*KASMSS
Trigger: GGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAA...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGTTACCCAGCCAGCTGCTaGTGCTGCTCGGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: KFVETCHGNRKQIQRPKGYPASC*CCSAVL
Trigger: CAAGACGGCCGAGCAGCAGCAGCAGCTGGCTGGGTA...ACCCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp ATAGGAAACAAATACAGAGGCCAAAGGGTCAACAGTGAGAGGTCAAGCTTGCCCGAGTCACGCCGGACCTaGGGCCTTTCTGCTGTAATG +
Preference number: 4 (lower is better)
Translates to: IGNKYRGQRVNSERSSLPESRRT*GLSAVM
Trigger: CATTACAGCAGAAAGGCCCCAGGTCCGGCGTGACTC...GGGCAAGCTTGACCTCTCACTGTTGACCCTTTGGCCTCTGTATTTGTTTCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGCCTGGGAGGTGATCTaGATGATGTCGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVAWEVI*MMSMAS
Trigger: GCTGGCCATCGACATCATCCAGATCACCTCCCAGGC...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GGACAGGCAGTTGTTGATGTTGGCAATAACATTGGCCCTGTAATTCGTCAGCTGAGGCTCAGGGTGTCCTaGGGTACCTGCCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: GQAVVDVGNNIGPVIRQLRLRVS*GTCQFC
Trigger: GCAGAATTGGCAGGTACCCCAGGACACCCTGAGCCT...CAGCTGACGAATTACAGGGCCAATGTTATTGCCAACATCAACAACTGCCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR TCA 90 bp ATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCTCTTCTTCCCTTTGGTaGAGACGCAGAACACATTGG +
Preference number: 4 (lower is better)
Translates to: MGAPAPIGHVNKPRSVQFSSSLW*RRRTHW
Trigger: CCAATGTGTTCTGCGTCTTCACCAAAGGGAAGAAGA...GAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR TCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTCCGCTGAGCTGGGCTaGCCCTTCTTCTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCSAELG*PFFFFP
Trigger: AGGGAAGAAGAAGAAGGGTCAGCCCAGCTCAGCGGA...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR TCA 90 bp CGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGTGGCCACCTCAATCTTaGTGGCACTGGGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RSLWKPVTAIGNKYRGQRWPPQS*WHWGPA
Trigger: TGCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCA...CCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp AGATTCAACTACCCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATGACAAGAGGATCACTTaGACCAGGAGGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RFNYPQLALKMEEPEVKNDKRIT*TRRSRL
Trigger: CAGCCTGGACCTCCTGGTTCAAGTGATCCTCTTGTC...ATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGGGTAGTTGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp ATAGGAAACAAATACAGAGGCCAAAGGGTCAACAGTGAGAGGTCAAGCTTGCCCGGCTACAAGATCCCTTaGGCCCAGGAGTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: IGNKYRGQRVNSERSSLPGYKIP*AQEFQT
Trigger: TGTCTGGAACTCCTGGGCTCAAGGGATCTTGTAGCC...GGGCAAGCTTGACCTCTCACTGTTGACCCTTTGGCCTCTGTATTTGTTTCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp AGGAGCAGAGCCTTAGGGGGAGCACATGCCGAGCAGGAAAACGAGCTCACATTTAGGTGGCTAATCAGCTaGCCTGAAAATAGAAAGACG +
Preference number: 4 (lower is better)
Translates to: RSRALGGAHAEQENELTFRWLIS*PENRKT
Trigger: CGTCTTTCTATTTTCAGGTCAGCTGATTAGCCACCT...AAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGTCCTCCTTCATGGTaGGGCCCAAGTGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVGPPSW*GPSAER
Trigger: TCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACC...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560869.6
CDS-3UTR GCA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTTACTCCTTCACCAGGTaGAGGTGCAAGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: FLACTRSAIVYKESLVLPYSFTR*RCKASM
Trigger: CATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTA...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTCAGGATGGGAGCTCCTaGCCCCATCGGACATGTAAA +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVQDGSS*PHRTCK
Trigger: TTTACATGTCCGATGGGGGCAGGAGCTCCCATCCTG...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp ATAGGAAACAAATACAGAGGCCAAAGGGTCAACAGTGAGAGGTCAAGCTTGCCCAAGAGTCCTTGGTGTTaGCTGGTTGGCTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: IGNKYRGQRVNSERSSLPKSPWC*LVGCPG
Trigger: TCCTGGGCAGCCAACCAGGCAACACCAAGGACTCTT...GGGCAAGCTTGACCTCTCACTGTTGACCCTTTGGCCTCTGTATTTGTTTCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTAAGAGTCCTTGGTGTTaGCTGGTTGGCTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FLACTRSAIVYKESLVLPKSPWC*LVGCPG
Trigger: TCCTGGGCAGCCAACCAGGCAACACCAAGGACTCTT...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp AGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACCCAGGTTCTTTCCTTGCGTaGACACGATCAGCTATCGTT +
Preference number: 4 (lower is better)
Translates to: RQERGGLNEVTGKRFNYPGSFLA*TRSAIV
Trigger: AACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC...TGGGTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTTCCTGGTTCTTTCCTTaGGTGCACACGATCAGCTAT +
Preference number: 4 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPASWFFP*VHTISY
Trigger: ATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGA...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR GCA 90 bp CTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAAGGTCAAGCTTGCCCTaGCCCTGCCCAGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: LKMEEPEVKNYGQPLKMKRSSLP*PCPDLS
Trigger: GCTGAGGTCTGGGCAGGGGCAGGGCAAGCTTGACCT...TTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp AGATTCAACTACCCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATCACTGGACAGGAATGTaGCCTCCAGCAGTCGGATCT +
Preference number: 4 (lower is better)
Translates to: RFNYPQLALKMEEPEVKNHWTGM*PPAVGS
Trigger: AGATCCGACTGCTGGAGGCCACATTCCTGTCCAGTG...ATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGGGTAGTTGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGGCCAATTCTGCTCCATaGACATCCGGAAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: GSFLACTRSAIVYKESLVANSAP*TSGRTG
Trigger: GCCTGTCCTTCCGGATGTCCATGGAGCAGAATTGGC...CACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp CTCCTGGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTGCCAATTCTGCTCCATaGACATCCGGAAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: LLVLSLRAHDQLSFTKSPANSAP*TSGRTG
Trigger: GCCTGTCCTTCCGGATGTCCATGGAGCAGAATTGGC...AGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TTCTCTTCCAGTTCTGTCTTCCATTCCACCATTGCTGAATCCCGCTCACGGCGGTTTACAAAGAGTCCTTaGTGTTGCCTGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FSSSSVFHSTIAESRSRRFTKSP*CCLVGC
Trigger: GCAGCCAACCAGGCAACACCAAGGACTCTTTGTAAA...CCGCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGACAGAACTGGAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp ACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGTCAGGTGGCCTTTGCTaGAGTCAGGGTAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TKFVETCHGNRKQIQRPKSGGLC*SQGSRW
Trigger: CCACCTGCTACCCTGACTTCAGCAAAGGCCACCTGA...CTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR TCA 90 bp CGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGTGCTCCGGATGCGCTTaGCCTCACTGTTGGATAGGT +
Preference number: 4 (lower is better)
Translates to: RSLWKPVTAIGNKYRGQRCSGCA*PHCWIG
Trigger: ACCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCA...CCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp AAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGTTTCACCAGGTGCAGGTaGAAGGCCTCCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KFVETCHGNRKQIQRPKGFTRCR*KASMSS
Trigger: GGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAA...ACCCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTTGCTGGGTGCAGAAGTaGTGGATGGTGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: FLACTRSAIVYKESLVLPCWVQK*WMVSAL
Trigger: CAATGCTGACACCATCCAGCACTTCTGCACCCAGCA...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp GGACAGGCAGTTGTTGATGTTGGCAATAACATTGGCCCTGTAATTCGTCAGCTGACTCTGCCTCTGATGTaGACTGCAACTTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GQAVVDVGNNIGPVIRQLTLPLM*TATFGG
Trigger: GCCCCCAAAAGTTGCAGTCCACATCAGAGGCAGAGT...CAGCTGACGAATTACAGGGCCAATGTTATTGCCAACATCAACAACTGCCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CCA 90 bp ACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGCCAGGTCCTCCTTCATaGTGCGGCCCAAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: TKFVETCHGNRKQIQRPKPGPPS*CGPSAE
Trigger: TTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGG...CTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp CTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAACGCCCCTTGCTGAGTTaGATGATGTACTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: LALKMEEPEVKNYGQPLKRPLLS*MMYSFT
Trigger: GGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCG...TTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp AGATTCAACTACCCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATCGCCCCTTGCTGAGTTaGATGATGTACTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: RFNYPQLALKMEEPEVKNRPLLS*MMYSFT
Trigger: GGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCG...ATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGGGTAGTTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp CGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGTGGGTGCAGAAGTGCTaGATGGTGTCAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: RSLWKPVTAIGNKYRGQRWVQKC*MVSALA
Trigger: GGCCAATGCTGACACCATCCAGCACTTCTGCACCCA...CCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp ATAGGAAACAAATACAGAGGCCAAAGGGTCAACAGTGAGAGGTCAAGCTTGCCCAGTCAGGGTAGCAGGTaGCATAAGTGGCCACCTCAA +
Preference number: 4 (lower is better)
Translates to: IGNKYRGQRVNSERSSLPSQGSR*HKWPPQ
Trigger: TTGAGGTGGCCACTTATGCCACCTGCTACCCTGACT...GGGCAAGCTTGACCTCTCACTGTTGACCCTTTGGCCTCTGTATTTGTTTCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp GAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAAGGCCAGAAATGGTGCCCAAGGCTTGCTaGGCACTCACAGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: EPEVKNYGQPLKMKRPEMVPKAC*ALTGRS
Trigger: TGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCAC...CATTTCTGGCCTTTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
3UTR CAA 72 bp ATCAAACACGCTAACTCCTACACACGTACAAAGACCTaGGGCATCCTTTATACCGGCCACTTCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: IKHANSYTRTKT*GILYTGHFLAT
Trigger: TGTGGCCAGGAAGTGGCCGGTATAAAGGATGCCCAAGGTCTTTGTACGTGTGTAGGAGTTAGCGTGTTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTTGTCTACAGTGGCGATaGTGTTTTCCAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVCLQWR*CFPGSP
Trigger: TGGAGACCCTGGAAAACATCATCGCCACTGTAGACA...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR GCA 90 bp CGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGACCCTAAAAGCCCCTaGCAGACGAGAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: RSLWKPVTAIGNKYRGQRDPKSP*QTRAHL
Trigger: AAGATGAGCTCTCGTCTGGCAGGGGCTTTTAGGGTC...CCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp TCCACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAGACCCTAAAAGCCCCTaGCAGACGAGAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: STKFVETCHGNRKQIQRPDPKSP*QTRAHL
Trigger: AAGATGAGCTCTCGTCTGGCAGGGGCTTTTAGGGTC...TGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTCGCCCCTTGCTGAGTTaGATGATGTACTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCRPLLS*MMYSFT
Trigger: GGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCG...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp ACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGTGGGTGCAGAAGTGCTaGATGGTGTCAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: TKFVETCHGNRKQIQRPKWVQKC*MVSALA
Trigger: GGCCAATGCTGACACCATCCAGCACTTCTGCACCCA...CTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTAGTCAGGGTAGCAGGTaGCATAAGTGGCCACCTCAA +
Preference number: 4 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCSQGSR*HKWPPQ
Trigger: TTGAGGTGGCCACTTATGCCACCTGCTACCCTGACT...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CCA 90 bp AAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGTAGGATAGCGCTCAGGTaGCCTTTGCTGAAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: KFVETCHGNRKQIQRPKGRIALR*PLLKSG
Trigger: CCCTGACTTCAGCAAAGGCCACCTGAGCGCTATCCT...ACCCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp CTCCTGGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTCACGTACAAAGACCTTaGGCATCCTTTATACCGGCC +
Preference number: 4 (lower is better)
Translates to: LLVLSLRAHDQLSFTKSPHVQRP*ASFIPA
Trigger: GGCCGGTATAAAGGATGCCCAAGGTCTTTGTACGTG...AGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR TCA 90 bp CTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAGACAAGAGGATCACTTaGACCAGGAGGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LKMEEPEVKNYGQPLKMKDKRIT*TRRSRL
Trigger: CAGCCTGGACCTCCTGGTTCAAGTGATCCTCTTGTC...TTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp AAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGTTGCTGGGTGCAGAAGTaGTGGATGGTGTCAGCATTG +
Preference number: 4 (lower is better)
Translates to: KFVETCHGNRKQIQRPKGCWVQK*WMVSAL
Trigger: CAATGCTGACACCATCCAGCACTTCTGCACCCAGCA...ACCCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR GCA 90 bp CTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAACTTAGGGGGAGCACATaGCGAGCAGGAAAACGAGCT +
Preference number: 4 (lower is better)
Translates to: LKMEEPEVKNYGQPLKMKLRGST*RAGKRA
Trigger: AGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAG...TTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp TCCACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAGACGCAGAACACATTaGCCAGGCCTTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: STKFVETCHGNRKQIQRPRRRTH*PGLWTS
Trigger: AGAAGTCCAAAGGCCTGGCCAATGTGTTCTGCGTCT...TGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CCA 90 bp GAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAAGGCCAGAAATGGGATGGTGTCAGCATTaGCCAGGATGTACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: EPEVKNYGQPLKMKRPEMGWCQH*PGCTQP
Trigger: TGGCTGGGTACATCCTGGCCAATGCTGACACCATCC...CATTTCTGGCCTTTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp GAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAAGGCCAGAAATGCGCCCCTTGCTGAGTTaGATGATGTACTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: EPEVKNYGQPLKMKRPEMRPLLS*MMYSFT
Trigger: GGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCG...CATTTCTGGCCTTTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp GAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAAGGCCAGAAATGAGTCAGGGTAGCAGGTaGCATAAGTGGCCACCTCAA +
Preference number: 4 (lower is better)
Translates to: EPEVKNYGQPLKMKRPEMSQGSR*HKWPPQ
Trigger: TTGAGGTGGCCACTTATGCCACCTGCTACCCTGACT...CATTTCTGGCCTTTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CCA 90 bp AAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGTCACGTACAAAGACCTTaGGCATCCTTTATACCGGCC +
Preference number: 4 (lower is better)
Translates to: KFVETCHGNRKQIQRPKGHVQRP*ASFIPA
Trigger: GGCCGGTATAAAGGATGCCCAAGGTCTTTGTACGTG...ACCCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS CCA 90 bp TGCAGAAAGACGCTCTCGGGGACCTCGGCGCCCGCGGCCGGCCGCTaGCCCATGCGCTCCTCGGCCGCCTCCGCCACGCCGCGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: CRKTLSGTSAPAAGR*PMRSSAASATPRRH
Trigger: GTGGCGGCGCGGCGTGGCGGAGGCGGCCGAGGAGCGCATGGGCCAGCGGCCGGCCGCGGGCGCCGAGGTCCCCGAGAGCGTCTTTCTGCA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS TCA 90 bp GCGCACCCATCCCCCGATGAGGACACCCGGGCACGGGCGAGGAAGTaGCTCGGCCTGTGTCGCCCGGCCGGGGAGTCACGCCGGACCTGG +
Preference number: 5 (lower is better)
Translates to: AHPSPDEDTRARARK*LGLCRPAGESRRTW
Trigger: CCAGGTCCGGCGTGACTCCCCGGCCGGGCGACACAGGCCGAGTCACTTCCTCGCCCGTGCCCGGGTGTCCTCATCGGGGGATGGGTGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS GCA 90 bp CGCCCAGCACCTGGTCGCGCAGCAGCTCGTACAGCGCCTCCACCTTaGTCTGGCGCCGCACCAGCTCCTCCTCGCTCACACCGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: RPAPGRAAARTAPPP*SGAAPAPPRSHRPP
Trigger: CGGCGGGCGGTGTGAGCGAGGAGGAGCTGGTGCGGCGCCAGAGCAAGGTGGAGGCGCTGTACGAGCTGCTGCGCGACCAGGTGCTGGGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS CCA 90 bp CCCGGGAGCTCGCTGGGCCCGGCTCCTTCAGTCCTGGGCAGGATGTaGAAGGCGCACCCATCCCCCGATGAGGACACCCGGGCACGGGCG +
Preference number: 5 (lower is better)
Translates to: PGSSLGPAPSVLGRM*KAHPSPDEDTRARA
Trigger: CGCCCGTGCCCGGGTGTCCTCATCGGGGGATGGGTGCGCCTTCCACATCCTGCCCAGGACTGAAGGAGCCGGGCCCAGCGAGCTCCCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp AGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCAGTGCTGCTCGGCCGTCTaGAGGACCAGGCGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: SVGRAGCSQVAGEPCWVQCCSAV*RTRRPL
Trigger: CAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCA...CTGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS GCA 90 bp GCGGCTTCAGCCGCTCCACCACGGCCTCCAGGTCCTCCTTCATGGTaGGGCCCAAGTGCAGAAAGACGCTCTCGGGGACCTCGGCGCCCG +
Preference number: 5 (lower is better)
Translates to: AASAAPPRPPGPPSW*GPSAERRSRGPRRP
Trigger: CGGGCGCCGAGGTCCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGGAGGCCGTGGTGGAGCGGCTGAAGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS CCA 90 bp TGTGACACGAAACCCAGAGCGCCTGAAGGTCCTGCTGCAGCCCCCTaGGCCTCGCCCCAGGTCTCCGCTCTCCGAGGCAGCGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: CDTKPRAPEGPAAAP*ASPQVSALRGSVSR
Trigger: CCGGGACACGCTGCCTCGGAGAGCGGAGACCTGGGGCGAGGCCCAGGGGGCTGCAGCAGGACCTTCAGGCGCTCTGGGTTTCGTGTCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558056.1
CDS CCA 90 bp ACAGCGGCTTCAGCCGCTCCACCACGGCCTCCAGGTCCTCCTTCATaGTGCGGCCCAAGTGCAGAAAGACGCTCTCGGGGACCTCGGCGC +
Preference number: 5 (lower is better)
Translates to: TAASAAPPRPPGPPS*CGPSAERRSRGPRR
Trigger: GCGCCGAGGTCCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGGAGGCCGTGGTGGAGCGGCTGAAGCCGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCATGCTGCTCGGCCGTCTaGAGGACCAGGCGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: TSAALNSSQRGVPKACWACCSAV*RTRRPL
Trigger: CAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCA...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGTGCTGCTCGGCCGTCTaGAGGACCAGGCGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: QETREEPRTSAALNSSQRCCSAV*RTRRPL
Trigger: CAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCA...CCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS TCA 90 bp GCCATCCAGCCCCTGCCTGGACCCGGCTGCGTCCTCGGGCTCCGCTaGGCTGGGCTGACCCTTCTTCTTCTTCCCTTTGGTGAAGACGCA +
Preference number: 5 (lower is better)
Translates to: AIQPLPGPGCVLGLR*AGLTLLLLPFGEDA
Trigger: TGCGTCTTCACCAAAGGGAAGAAGAAGAAGGGTCAGCCCAGCTCAGCGGAGCCCGAGGACGCAGCCGGGTCCAGGCAGGGGCTGGATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559195.5
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CAA 90 bp GAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTTCAAAGCCGTGGCTCTaGAGCTCACCCAGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: ETREEPRTSAALNSSQRGSKPWL*SSPRGP
Trigger: GGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTGA...ACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCATCAAAGCCGTGGCTCTaGAGCTCACCCAGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: TSAALNSSQRGVPKACWASKPWL*SSPRGP
Trigger: GGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTGA...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCCGGGGAGCCGTGCTGGGTGCAGCGCCCCTTGCTGAGTaGGATGATGTACTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: QRRESRLQPGRRGAVLGAAPLAE*DDVLLH
Trigger: GTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGC...TGCACCCAGCACGGCTCCCCGGCGACCTGGCTGCAGCCTGCTCTCCCTACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CAA 90 bp GATCTGGATGATGTCGATGGCCAGCTCGCTGTGGCAGTGGCCGTCCAGCCTCTGTGCTGCTCGGCCGTCTaGAGGACCAGGCGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: DLDDVDGQLAVAVAVQPLCCSAV*RTRRPL
Trigger: CAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCA...CAGAGGCTGGACGGCCACTGCCACAGCGAGCTGGCCATCGACATCATCCAGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CAA 90 bp CCCCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCTCAAAGCCGTGGCTCTaGAGCTCACCCAGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: PLEPPEGVQDCRHPDLSPSKPWL*SSPRGP
Trigger: GGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTGA...GGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp TGGCCGTCCAGCCTCTGGGGAGGCACATCCTCAGCCCAGCGCCGTGCCTCTAGCGTGTGCGTGAACCTCTaGAACAGTGGCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: WPSSLWGGTSSAQRRASSVCVNL*NSGFRS
Trigger: GGACCTGAAGCCACTGTTCAAGAGGTTCACGCACAC...GCTAGAGGCACGGCGCTGGGCTGAGGATGTGCCTCCCCAGAGGCTGGACGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CAA 90 bp GTAGTAGACACCAAGCCCTCGGGGGACCACCCTCTAGTTGAGGCCTTGGGGGATTGCTGCTCGGCCGTCTaGAGGACCAGGCGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: VVDTKPSGDHPLVEALGDCCSAV*RTRRPL
Trigger: CAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCA...ATCCCCCAAGGCCTCAACTAGAGGGTGGTCCCCCGAGGGCTTGGTGTCTACTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp AGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGGCTGGGCGTGGGGGATaGTCTCAGGGGACTGAGACA +
Preference number: 5 (lower is better)
Translates to: RPGRNREPALLLTAPSGVAGRGG*SQGTET
Trigger: TGTCTCAGTCCCCTGAGACAATCCCCCACGCCCAGC...CACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp AGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGGTGGCCACCTCAATCTaGATGGCACTGGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: RPGRNREPALLLTAPSGVVATSI*MALGSC
Trigger: GCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCAC...CACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACCACCCTGTGGCCACCTCAATCTaGATGGCACTGGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: QEVLGPSVVDTKPSGDHPVATSI*MALGSC
Trigger: GCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCAC...AGGGTGGTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp CTCGGCCCCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGTTGGATAGGTTCCCCTaGATGGCCAGGATAGCGCTC +
Preference number: 5 (lower is better)
Translates to: LGPTHEEDSHEADCGGALLDRFP*MARIAL
Trigger: GAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAA...CAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp AATAGGGGCCGGGAGGGCTCCTGCGCCCCCATGCTGACGTCCAAGATGCTCCGGTTGGATAGGTTCCCCTaGATGGCCAGGATAGCGCTC +
Preference number: 5 (lower is better)
Translates to: NRGREGSCAPMLTSKMLRLDRFP*MARIAL
Trigger: GAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAA...CCGGAGCATCTTGGACGTCAGCATGGGGGCGCAGGAGCCCTCCCGGCCCCTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CAA 90 bp GGTAGAGCGAGGTGCCCGGCAGGGCAGGGGATGAACGGAGGGTGCGGTGGGCAGGTTTACAAAGAGTCCTaGGTGTTGCCTGGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GRARCPAGQGMNGGCGGQVYKES*VLPGWL
Trigger: CAGCCAACCAGGCAACACCAAGGACTCTTTGTAAAC...CTGCCCACCGCACCCTCCGTTCATCCCCTGCCCTGCCGGGCACCTCGCTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp AGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGAGTGAGAGGTCAAGCTaGCCCTGCCCCTGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: RTSAALNSSQRGVPKACWSERSS*PCPCPD
Trigger: GTCTGGGCAGGGGCAGGGCAAGCTTGACCTCTCACT...CCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp CCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGCTGGGCGTGGGGGATaGTCTCAGGGGACTGAGACA +
Preference number: 5 (lower is better)
Translates to: PRASRRSAGLPTPRFEPRAGRGG*SQGTET
Trigger: TGTCTCAGTCCCCTGAGACAATCCCCCACGCCCAGC...CCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp CCTGAGTCCGAAGGGCCCCCTCTCAGGCTGAGAAGGAACTTTCAGGCCCAGGGAGCTGGGCGTGGGGGATaGTCTCAGGGGACTGAGACA +
Preference number: 5 (lower is better)
Translates to: PESEGPPLRLRRNFQAQGAGRGG*SQGTET
Trigger: TGTCTCAGTCCCCTGAGACAATCCCCCACGCCCAGC...TCCCTGGGCCTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCCCTTCGGACTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS TCA 90 bp ACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGTGGCTaGGACAGGAGAGGCAGGATGTCTAGTCACGCCCTGGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: TGAAQRVCVNLLNSG*DRRGRMSSHALERK
Trigger: CTTCCTCTCCAGGGCGTGACTAGACATCCTGCCTCTCCTGTCTCAGCCACTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561156.1
CDS GCA 90 bp GCGGCTTCAGCCGCTCCACCACGGCCTCCAGGTCCTCCTTCATGGTaGGGCCCAAGTGCAGAAAGACGCTCTCGGGGACTTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: AASAAPPRPPGPPSW*GPSAERRSRGLLLL
Trigger: AAGAAGAAGAAGTCCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGGAGGCCGTGGTGGAGCGGCTGAAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS CCA 90 bp CCATCAACTCCCTCACATTGGCCTGGAGGAGGAGGGGCAGGTCACTaGGGCACTATCCCTCACCTCGCTCACCTGGAAGACCCGTCAAGC +
Preference number: 5 (lower is better)
Translates to: PSTPSHWPGGGGAGH*GTIPHLAHLEDPSS
Trigger: GCTTGACGGGTCTTCCAGGTGAGCGAGGTGAGGGATAGTGCCCCAGTGACCTGCCCCTCCTCCTCCAGGCCAATGTGAGGGAGTTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560428.1
CDS CCA 90 bp ACAGCGGCTTCAGCCGCTCCACCACGGCCTCCAGGTCCTCCTTCATaGTGCGGCCCAAGTGCAGAAAGACGCTCTCGGGGACTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: TAASAAPPRPPGPPS*CGPSAERRSRGLLL
Trigger: AAGAAGAAGTCCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGGAGGCCGTGGTGGAGCGGCTGAAGCCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CAA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCAAGGACCAGGCGCCCCTaGCTGAGTTGGATGATGTAC +
Preference number: 5 (lower is better)
Translates to: TSAALNSSQRGVPKACWARTRRP*LSWMMY
Trigger: GTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCT...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp AGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGTGGATGGTGTCAGCATaGGCCAGGATGTACCCAGCC +
Preference number: 5 (lower is better)
Translates to: RRPGRNREPALLLTAPSGWMVSA*ARMYPA
Trigger: GGCTGGGTACATCCTGGCCAATGCTGACACCATCCA...CCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp AGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGTCGTGGCCACCTCAATCTaGATGGCACTGGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: RASRRSAGLPTPRFEPRVVATSI*MALGSC
Trigger: GCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCAC...GACCCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp CGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTAGGACCCAGGAGGTCTaGGGCCCTTCGGTAGTAGAC +
Preference number: 5 (lower is better)
Translates to: REPALLLTAPSGVCPRLARTQEV*GPSVVD
Trigger: GTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT...AGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp GAGGTCCAGGCTGCAGTGAGCCTTGATGCCATGACCAGGCCACTGCACTCCAGCAGGACCCAGGAGGTCTaGGGCCCTTCGGTAGTAGAC +
Preference number: 5 (lower is better)
Translates to: EVQAAVSLDAMTRPLHSSRTQEV*GPSVVD
Trigger: GTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT...GCTGGAGTGCAGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCCTGGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp CGCTTGACCTCACTGTTGGATAGGTTCCCCTTGATGGCCAGGATAGCGCTCAGGTCAAAGCCGTGGCTCTaGAGCTCACCCAGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RLTSLLDRFPLMARIALRSKPWL*SSPRGP
Trigger: GGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTGA...CCTGAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CAA 90 bp AGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGTGTGCGTGAACCTCTaGAACAGTGGCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SGDDVFQGLHRGRPAGVRVCVNL*NSGFRS
Trigger: GGACCTGAAGCCACTGTTCAAGAGGTTCACGCACAC...ACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CAA 90 bp CCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGACAGAGGCGCCCCTTGCTGAGTaGGATGATGTACTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: PPTRRTVMRPTVEGLWTEAPLAE*DDVLLH
Trigger: GTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGC...CTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp AGGAACGCAGGCAGCTCCACCAGCAGCACCCGCTTTATCTGTGAGCCCAAGTCCGTGGCCACCTCAATCTaGATGGCACTGGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: RNAGSSTSSTRFICEPKSVATSI*MALGSC
Trigger: GCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCAC...GGACTTGGGCTCACAGATAAAGCGGGTGCTGCTGGTGGAGCTGCCTGCGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CAA 90 bp CAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACCACCCTTTGGATAGGTTCCCCTaGATGGCCAGGATAGCGCTC +
Preference number: 5 (lower is better)
Translates to: QEVLGPSVVDTKPSGDHPLDRFP*MARIAL
Trigger: GAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAA...AGGGTGGTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCATTGGATAGGTTCCCCTaGATGGCCAGGATAGCGCTC +
Preference number: 5 (lower is better)
Translates to: GRNREPALLLTAPSGVCPLDRFP*MARIAL
Trigger: GAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAA...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGTTGGATAGGTTCCCCTaGATGGCCAGGATAGCGCTC +
Preference number: 5 (lower is better)
Translates to: QETREEPRTSAALNSSQRLDRFP*MARIAL
Trigger: GAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAA...CCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGACAGAGTCTTCCATTCCACCATaGCTGAATCCCGCTCACGGC +
Preference number: 5 (lower is better)
Translates to: PPTRRTVMRPTVEGLWTESSIPP*LNPAHG
Trigger: GCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGA...CTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp AGGACCCAGGAGGTCTTGGGCCCTTCGGTAGTAGACACCAAGCCCTCGGGGGACTCTTCCATTCCACCATaGCTGAATCCCGCTCACGGC +
Preference number: 5 (lower is better)
Translates to: RTQEVLGPSVVDTKPSGDSSIPP*LNPAHG
Trigger: GCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGA...GTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCCAAGACCTCCTGGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCAAAGACGCAGAACACATaGGCCAGGCCTTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: TSAALNSSQRGVPKACWAKTQNT*ARPLDF
Trigger: GAAGTCCAAAGGCCTGGCCAATGTGTTCTGCGTCTT...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CTCGGCCCCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGAGGCAGTTGTTGATGTaGGCAATAACATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LGPTHEEDSHEADCGGALRQLLM*AITLAL
Trigger: CAGGGCCAATGTTATTGCCAACATCAACAACTGCCT...CAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTGTGTGCGTGAACCTCTaGAACAGTGGCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSVCVNL*NSGFRS
Trigger: GGACCTGAAGCCACTGTTCAAGAGGTTCACGCACAC...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp AGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCGCCCCTTGCTGAGTaGGATGATGTACTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: RTSAALNSSQRGVPKACWAPLAE*DDVLLH
Trigger: GTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGC...CCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp AGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGGTCGCGCCCCTTGCTGAGTaGGATGATGTACTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: RASRRSAGLPTPRFEPRVAPLAE*DDVLLH
Trigger: GTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGC...GACCCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp ACCAGCAGCACCCGCTTTATCTGTGAGCCCAAGTCCAGCGTGATGCTCTCGGCCAGGACCAGGCGCCCCTaGCTGAGTTGGATGATGTAC +
Preference number: 5 (lower is better)
Translates to: TSSTRFICEPKSSVMLSARTRRP*LSWMMY
Trigger: GTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCT...GGCCGAGAGCATCACGCTGGACTTGGGCTCACAGATAAAGCGGGTGCTGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CAA 90 bp CCTCGTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCATGGATGGTGTCAGCATaGGCCAGGATGTACCCAGCC +
Preference number: 5 (lower is better)
Translates to: PRVYSGDDVFQGLHRGRPWMVSA*ARMYPA
Trigger: GGCTGGGTACATCCTGGCCAATGCTGACACCATCCA...TGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGACACGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CAA 90 bp CAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGCGCTTGACCTCACTGTaGGATAGGTTCCCCTTGATG +
Preference number: 5 (lower is better)
Translates to: QETREEPRTSAALNSSQRRLTSL*DRFPLM
Trigger: CATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCG...CCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp GGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACAGTGAGAGGTCAAGCTaGCCCTGCCCCTGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: GGRQERGGLNEVTGKRFNSERSS*PCPCPD
Trigger: GTCTGGGCAGGGGCAGGGCAAGCTTGACCTCTCACT...GTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp CTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTAGCATCAGAGCACAGAGGCTACAAGATCCCTaGAGCCCAGGAGTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: LTGPAPPPGLGRSSIRAQRLQDP*SPGVPD
Trigger: GTCTGGAACTCCTGGGCTCAAGGGATCTTGTAGCCT...CTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS GCA 90 bp CGCTCCACCACGGCCTCCAGGTCCTCCTTCATGGTGCGGCCCAAGTaGAGAAAGACGCTCTCGGGGACTTCTTCTTCTTCTCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RSTTASRSSFMVRPK*RKTLSGTSSSSPSS
Trigger: AGAAGAAGGAGAAGAAGAAGAAGTCCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGGAGGCCGTGGTGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CAA 90 bp CCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGAAGACGCAGAACACATaGGCCAGGCCTTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: PRASRRSAGLPTPRFEPRKTQNT*ARPLDF
Trigger: GAAGTCCAAAGGCCTGGCCAATGTGTTCTGCGTCTT...CCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp CTGCAGGCGAATGATCTCGGCCAGCGTAGGGAGAGCAGGCTGCAGCCAGGTCGCAGGCAGTTGTTGATGTaGGCAATAACATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LQANDLGQRRESRLQPGRRQLLM*AITLAL
Trigger: CAGGGCCAATGTTATTGCCAACATCAACAACTGCCT...GCGACCTGGCTGCAGCCTGCTCTCCCTACGCTGGCCGAGATCATTCGCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559406.5
ENST00000560562.5
ENST00000561156.1
CDS-3UTR CAA 90 bp CTTGCTGAGTTGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCCATTCAAAGCCGTGGCTCTaGAGCTCACCCAGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: LAELDDVLLHQVQVQGLHSKPWL*SSPRGP
Trigger: GGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTGA...ATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CAA 90 bp TCTGTCCAGTTCCAGCTGACAGGGCCTGCACCTCCGCCAGGGCTAGGCAGAAGTCGCTTGACCTCACTGTaGGATAGGTTCCCCTTGATG +
Preference number: 5 (lower is better)
Translates to: SVQFQLTGPAPPPGLGRSRLTSL*DRFPLM
Trigger: CATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCG...ACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp GAGCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCCGCTTGACCTCACTGTaGGATAGGTTCCCCTTGATG +
Preference number: 5 (lower is better)
Translates to: EHRRPGRNREPALLLTAPRLTSL*DRFPLM
Trigger: CATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCG...GGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CCTCGTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAATGCTCCGGATGCGCTaGACCTCACTGTTGGATAGG +
Preference number: 5 (lower is better)
Translates to: PRVYSGDDVFQGLHRGRPMLRMR*TSLLDR
Trigger: CCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCAT...TGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGACACGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CAA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAGTTTACAAAGAGTCCTaGGTGTTGCCTGGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GRNREPALLLTAPSGVCPVYKES*VLPGWL
Trigger: CAGCCAACCAGGCAACACCAAGGACTCTTTGTAAAC...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp AGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTTTACAAAGAGTCCTaGGTGTTGCCTGGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: RRPGRNREPALLLTAPSGVYKES*VLPGWL
Trigger: CAGCCAACCAGGCAACACCAAGGACTCTTTGTAAAC...CCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp GAGCACAGGAGACCCGGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCCTCCTGGTTCTTTCCTaGCGTGCACACGATCAGCTA +
Preference number: 5 (lower is better)
Translates to: EHRRPGRNREPALLLTAPLLVLS*RAHDQL
Trigger: TAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAG...GGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp AGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGAGACAAGAGGATCACTaGAACCAGGAGGTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: RTSAALNSSQRGVPKACWRQEDH*NQEVQA
Trigger: AGCCTGGACCTCCTGGTTCAAGTGATCCTCTTGTCT...CCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp CCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGACAGAGACACGTACAAAGACCTaGGGCATCCTTTATACCGGC +
Preference number: 5 (lower is better)
Translates to: PPTRRTVMRPTVEGLWTETRTKT*GILYTG
Trigger: GCCGGTATAAAGGATGCCCAAGGTCTTTGTACGTGT...CTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp GTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCCATGAGCTCCTCCCGGAAACAAGCTCACCCACCAGCTaGGGGCTGTTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: VLLHQVQVQGLHELLPETSSPTS*GLLMMS
Trigger: TGACATCATCAACAGCCCCAAGCTGGTGGGTGAGCT...TGTTTCCGGGAGGAGCTCATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CAA 90 bp ACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGGCAAGGCAGTTGTTGATGTaGGCAATAACATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: TSAALNSSQRGVPKACWARQLLM*AITLAL
Trigger: CAGGGCCAATGTTATTGCCAACATCAACAACTGCCT...TGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp GGGAGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCAGTTGTTGATGTaGGCAATAACATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GRNREPALLLTAPSGVCPRQLLM*AITLAL
Trigger: CAGGGCCAATGTTATTGCCAACATCAACAACTGCCT...TGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp TTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGTGCGTGAACCTCTTGAACAGCGGAAGGACAGGCAGTaGTTGATGTTGGCAATAACA +
Preference number: 5 (lower is better)
Translates to: FQGLHRGRPAGVREPLEQRKDRQ*LMLAIT
Trigger: TGTTATTGCCAACATCAACAACTGCCTGTCCTTCCG...CTGTTCAAGAGGTTCACGCACACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559406.5
ENST00000560562.5
ENST00000561156.1
CDS-3UTR CAA 90 bp CGGCCTCCCAAAGATGTCCACGTGACAGTCCCCAGAGCCTGTGACTATGTTAGGAGGACCAGGCGCCCCTaGCTGAGTTGGATGATGTAC +
Preference number: 5 (lower is better)
Translates to: RPPKDVHVTVPRACDYVRRTRRP*LSWMMY
Trigger: GTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCT...CCTAACATAGTCACAGGCTCTGGGGACTGTCACGTGGACATCTTTGGGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp CGGCCTCCCAAAGATGTCCACGTGACAGTCCCCAGAGCCTGTGACTATGTTAGGTGGATGGTGTCAGCATaGGCCAGGATGTACCCAGCC +
Preference number: 5 (lower is better)
Translates to: RPPKDVHVTVPRACDYVRWMVSA*ARMYPA
Trigger: GGCTGGGTACATCCTGGCCAATGCTGACACCATCCA...CCTAACATAGTCACAGGCTCTGGGGACTGTCACGTGGACATCTTTGGGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp AGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCTTGCTGGATCAACTCCCTCACATaGGCTTGGGGTAGAGGTTCT +
Preference number: 5 (lower is better)
Translates to: RTSAALNSSQRGVPKACWINSLT*AWGRGS
Trigger: AGAACCTCTACCCCAAGCCAATGTGAGGGAGTTGAT...CCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560670.5
CDS-3UTR CAA 90 bp ACCAGCAGCACCCGCTTTATCTGTGAGCCCAAGTCCAGCGTGATGCTCTCGGCCACATTGGCCAGGCCTTaGGACTTCTTCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TSSTRFICEPKSSVMLSATLARP*DFFFFS
Trigger: GGAGAAGAAGAAGAAGTCCAAAGGCCTGGCCAATGT...GGCCGAGAGCATCACGCTGGACTTGGGCTCACAGATAAAGCGGGTGCTGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560562.5
CDS-3UTR CAA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGAGGCAGTTGTTGATGTaGGCAATAACATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RNREPALLLTAPSGVCPRRQLLM*AITLAL
Trigger: CAGGGCCAATGTTATTGCCAACATCAACAACTGCCT...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CCCTGCAGCTCTGAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTAGGACCAGGCGCCCCTaGCTGAGTTGGATGATGTAC +
Preference number: 5 (lower is better)
Translates to: PCSSENSGSLVSTVAMMFRTRRP*LSWMMY
Trigger: GTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCT...AAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTCAGAGCTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CAA 90 bp GGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACTGGATGGTGTCAGCATaGGCCAGGATGTACCCAGCC +
Preference number: 5 (lower is better)
Translates to: GRQERGGLNEVTGKRFNYWMVSA*ARMYPA
Trigger: GGCTGGGTACATCCTGGCCAATGCTGACACCATCCA...GTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp GATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTGTGGCCACCTCAATCTaGATGGCACTGGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: DGSSCPHRTCKQTKVCPVVATSI*MALGSC
Trigger: GCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCAC...AACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGCAGTGGGAACTAAAGTaGCAGATGGAACTAAGGTGG +
Preference number: 5 (lower is better)
Translates to: RNREPALLLTAPSGVCPRQWELK*QMELRW
Trigger: CCACCTTAGTTCCATCTGCAACTTTAGTTCCCACTG...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS TCA 90 bp CGGGCTCCGCTGAGCTGGGCTGACCCTTCTTCTTCTTCCCTTTGGTaGAGACGCAGAACACATTGGCCAGGCCTTTGGACTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RAPLSWADPSSSSLW*RRRTHWPGLWTSSS
Trigger: AGAAGAAGAAGTCCAAAGGCCTGGCCAATGTGTTCTGCGTCTTCACCAAAGGGAAGAAGAAGAAGGGTCAGCCCAGCTCAGCGGAGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559195.5
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CCTAGAGCCTCCAGAAGGAGTGCAGGACTGCCGACACCCAGATTTGAGCCCCGGTTCTTCTTCTTCCCTTaGGTGAAGACGCAGAACACA +
Preference number: 5 (lower is better)
Translates to: PRASRRSAGLPTPRFEPRFFFFP*VKTQNT
Trigger: TGTGTTCTGCGTCTTCACCAAAGGGAAGAAGAAGAA...CCGGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp CCACCCACGAGGAGGACAGTCATGAGGCCGACTGTGGAGGGGCTCTGGACAGAGAAGGACAGGCAGTTGTaGATGTTGGCAATAACATTG +
Preference number: 5 (lower is better)
Translates to: PPTRRTVMRPTVEGLWTEKDRQL*MLAITL
Trigger: CAATGTTATTGCCAACATCAACAACTGCCTGTCCTT...CTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp CAGGTGGCCTTTGCTGAAGTCAGGGTAGCAGGTGGCATAAGTGGCCACCTCAATGCGCCCCTTGCTGAGTaGGATGATGTACTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: QVAFAEVRVAGGISGHLNAPLAE*DDVLLH
Trigger: GTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGC...ATTGAGGTGGCCACTTATGCCACCTGCTACCCTGACTTCAGCAAAGGCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CAA 90 bp TCCACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCATGCTGCTCGGCCGTCTaGAGGACCAGGCGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: STKFVETCHGNRKQIQRPCCSAV*RTRRPL
Trigger: CAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCA...TGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp CCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTTGGATGGTGTCAGCATaGGCCAGGATGTACCCAGCC +
Preference number: 5 (lower is better)
Translates to: PQLALKMEEPEVKNYGQPWMVSA*ARMYPA
Trigger: GGCTGGGTACATCCTGGCCAATGCTGACACCATCCA...AGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp GAGAACTCAGGCAGCCTCGTGTCTACAGTGGCGATGATGTTTTCCAGGGTCTCCTTGGATAGGTTCCCCTaGATGGCCAGGATAGCGCTC +
Preference number: 5 (lower is better)
Translates to: ENSGSLVSTVAMMFSRVSLDRFP*MARIAL
Trigger: GAGCGCTATCCTGGCCATCAAGGGGAACCTATCCAA...GGAGACCCTGGAAAACATCATCGCCACTGTAGACACGAGGCTGCCTGAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CAA 90 bp CTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCTCTTGAGCTCACCCAGGTTTACAAAGAGTCCTaGGTGTTGCCTGGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: LMQVLEQGVKAVALELTQVYKES*VLPGWL
Trigger: CAGCCAACCAGGCAACACCAAGGACTCTTTGTAAAC...CTGGGTGAGCTCAAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CAA 90 bp GGAGGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACCTCCTGGTTCTTTCCTaGCGTGCACACGATCAGCTA +
Preference number: 5 (lower is better)
Translates to: GGRQERGGLNEVTGKRFNLLVLS*RAHDQL
Trigger: TAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAG...GTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp GGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACAAGACGCAGAACACATaGGCCAGGCCTTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: GRQERGGLNEVTGKRFNYKTQNT*ARPLDF
Trigger: GAAGTCCAAAGGCCTGGCCAATGTGTTCTGCGTCTT...GTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp AGGAACCGAGAACCAGCGCTGCTCTTAACAGCTCCCAGCGGGGTGTGCCCAAGGAAGGACAGGCAGTTGTaGATGTTGGCAATAACATTG +
Preference number: 5 (lower is better)
Translates to: RNREPALLLTAPSGVCPRKDRQL*MLAITL
Trigger: CAATGTTATTGCCAACATCAACAACTGCCTGTCCTT...CCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp TCTACAGTGGCGATGATGTTTTCCAGGGTCTCCACAGGGGCCGCCCAGCGGGTGAAGGACAGGCAGTTGTaGATGTTGGCAATAACATTG +
Preference number: 5 (lower is better)
Translates to: STVAMMFSRVSTGAAQRVKDRQL*MLAITL
Trigger: CAATGTTATTGCCAACATCAACAACTGCCTGTCCTT...CACCCGCTGGGCGGCCCCTGTGGAGACCCTGGAAAACATCATCGCCACTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559406.5
ENST00000560562.5
ENST00000561156.1
CDS-3UTR CAA 90 bp CGCCCCTTGCTGAGTTGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCCGGAAGGACAGGCAGTaGTTGATGTTGGCAATAACA +
Preference number: 5 (lower is better)
Translates to: RPLLSWMMYSFTRCRCKARKDRQ*LMLAIT
Trigger: TGTTATTGCCAACATCAACAACTGCCTGTCCTTCCG...GGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAGGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000561156.1
CDS-3UTR CAA 90 bp CTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGCTCTTGAGCTCACCCAGCGGAAGGACAGGCAGTaGTTGATGTTGGCAATAACA +
Preference number: 5 (lower is better)
Translates to: LMQVLEQGVKAVALELTQRKDRQ*LMLAIT
Trigger: TGTTATTGCCAACATCAACAACTGCCTGTCCTTCCG...CTGGGTGAGCTCAAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CAA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTCAAAGCCGTGGCTCTaGAGCTCACCCAGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCSKPWL*SSPRGP
Trigger: GGGCCCCCTGGGTGAGCTCAAGAGCCACGGCTTTGA...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGCTGGATGGTGTCAGCATaGGCCAGGATGTACCCAGCC +
Preference number: 5 (lower is better)
Translates to: RAHDQLSFTKSPWCCLVGWMVSA*ARMYPA
Trigger: GGCTGGGTACATCCTGGCCAATGCTGACACCATCCA...GCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp AGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACCCAATGCTCCGGATGCGCTaGACCTCACTGTTGGATAGG +
Preference number: 5 (lower is better)
Translates to: RQERGGLNEVTGKRFNYPMLRMR*TSLLDR
Trigger: CCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCAT...TGGGTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp GATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTATGCTCCGGATGCGCTaGACCTCACTGTTGGATAGG +
Preference number: 5 (lower is better)
Translates to: DGSSCPHRTCKQTKVCPVMLRMR*TSLLDR
Trigger: CCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCAT...AACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp GAACAGTGGCTTCAGGTCCTCATGCAGGTTCTGGAGCAGGGTGTCAAAGCCGTGGTTTACAAAGAGTCCTaGGTGTTGCCTGGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: EQWLQVLMQVLEQGVKAVVYKES*VLPGWL
Trigger: CAGCCAACCAGGCAACACCAAGGACTCTTTGTAAAC...CACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCACTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559406.5
ENST00000560562.5
CDS-3UTR CAA 90 bp GGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGAGTGAGAGGTCAAGCTaGCCCTGCCCCTGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: GSFLACTRSAIVYKESLVSERSS*PCPCPD
Trigger: GTCTGGGCAGGGGCAGGGCAAGCTTGACCTCTCACT...CACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGTGGCCACCTCAATCTaGATGGCACTGGGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVVATSI*MALGSC
Trigger: GCAGGACCCCAGTGCCATCAAGATTGAGGTGGCCAC...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCGCTTGACCTCACTGTaGGATAGGTTCCCCTTGATG +
Preference number: 5 (lower is better)
Translates to: PQLALKMEEPEVKNYGQPRLTSL*DRFPLM
Trigger: CATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCG...AGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp CTTGCTGAGTTGGATGATGTACTCCTTCACCAGGTGCAGGTGCAAGGCCTCCATCGCTTGACCTCACTGTaGGATAGGTTCCCCTTGATG +
Preference number: 5 (lower is better)
Translates to: LAELDDVLLHQVQVQGLHRLTSL*DRFPLM
Trigger: CATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCG...ATGGAGGCCTTGCACCTGCACCTGGTGAAGGAGTACATCATCCAACTCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS-3UTR CAA 90 bp CCACAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTAGACAAGAGGATCACTaGAACCAGGAGGTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: PQLALKMEEPEVKNYGQPRQEDH*NQEVQA
Trigger: AGCCTGGACCTCCTGGTTCAAGTGATCCTCTTGTCT...AGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp AGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCAGCTACATTGGCCAGGCCTTaGGACTTCTTCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SSCPHRTCKQTKVCPVPATLARP*DFFFFS
Trigger: GGAGAAGAAGAAGAAGTCCAAAGGCCTGGCCAATGT...AGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CAA 90 bp GGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACAGGCAGTTGTTGATGTaGGCAATAACATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GRQERGGLNEVTGKRFNYRQLLM*AITLAL
Trigger: CAGGGCCAATGTTATTGCCAACATCAACAACTGCCT...GTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp GGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCCACGGAAGGACAGGCAGTaGTTGATGTTGGCAATAACA +
Preference number: 5 (lower is better)
Translates to: GSSCPHRTCKQTKVCPVPRKDRQ*LMLAIT
Trigger: TGTTATTGCCAACATCAACAACTGCCTGTCCTTCCG...TGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp ATAGGAAACAAATACAGAGGCCAAAGGGTCAACAGTGAGAGGTCAAGCTTGCCCAGGACCAGGCGCCCCTaGCTGAGTTGGATGATGTAC +
Preference number: 5 (lower is better)
Translates to: IGNKYRGQRVNSERSSLPRTRRP*LSWMMY
Trigger: GTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCT...GGGCAAGCTTGACCTCTCACTGTTGACCCTTTGGCCTCTGTATTTGTTTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp CGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTGGCACATTGGCCAGGCCTTaGGACTTCTTCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RAHDQLSFTKSPWCCLVGTLARP*DFFFFS
Trigger: GGAGAAGAAGAAGAAGTCCAAAGGCCTGGCCAATGT...GCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CAA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTAGCTCACCCACCAGCTaGGGGCTGTTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: FLACTRSAIVYKESLVLPSSPTS*GLLMMS
Trigger: TGACATCATCAACAGCCCCAAGCTGGTGGGTGAGCT...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560869.6
CDS-3UTR CAA 90 bp CTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAGTGTGCGTGAACCTCTaGAACAGTGGCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LALKMEEPEVKNYGQPLKVCVNL*NSGFRS
Trigger: GGACCTGAAGCCACTGTTCAAGAGGTTCACGCACAC...TTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp CTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAGCGCCCCTTGCTGAGTaGGATGATGTACTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: LALKMEEPEVKNYGQPLKAPLAE*DDVLLH
Trigger: GTGAAGGAGTACATCATCCAACTCAGCAAGGGGCGC...TTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp CGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGAGGACCAGGCGCCCCTaGCTGAGTTGGATGATGTAC +
Preference number: 5 (lower is better)
Translates to: RSLWKPVTAIGNKYRGQRRTRRP*LSWMMY
Trigger: GTACATCATCCAACTCAGCAAGGGGCGCCTGGTCCT...CCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp TTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTGGTTATGCTCCGGATGCGCTaGACCTCACTGTTGGATAGG +
Preference number: 5 (lower is better)
Translates to: LRAHDQLSFTKSPWCCLVMLRMR*TSLLDR
Trigger: CCTATCCAACAGTGAGGTCAAGCGCATCCGGAGCAT...AACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp GGGAGGCAGGAGAGGGGAGGCCTCAATGAGGTGACGGGAAAAAGATTCAACTACAAGGACAGGCAGTTGTaGATGTTGGCAATAACATTG +
Preference number: 5 (lower is better)
Translates to: GRQERGGLNEVTGKRFNYKDRQL*MLAITL
Trigger: CAATGTTATTGCCAACATCAACAACTGCCTGTCCTT...GTAGTTGAATCTTTTTCCCGTCACCTCATTGAGGCCTCCCCTCTCCTGCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp GGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGCGCTTGACCTCACTGTaGGATAGGTTCCCCTTGATG +
Preference number: 5 (lower is better)
Translates to: GSFLACTRSAIVYKESLVRLTSL*DRFPLM
Trigger: CATCAAGGGGAACCTATCCAACAGTGAGGTCAAGCG...CACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp ACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGAGCTCACCCACCAGCTaGGGGCTGTTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: TKFVETCHGNRKQIQRPKSSPTS*GLLMMS
Trigger: TGACATCATCAACAGCCCCAAGCTGGTGGGTGAGCT...CTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp ATGGGAGCTCCTGCCCCCATCGGACATGTAAACAAACCAAGGTCTGTCCAGTTCAAGGACAGGCAGTTGTaGATGTTGGCAATAACATTG +
Preference number: 5 (lower is better)
Translates to: MGAPAPIGHVNKPRSVQFKDRQL*MLAITL
Trigger: CAATGTTATTGCCAACATCAACAACTGCCTGTCCTT...GAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp AAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGTGTGTGCGTGAACCTCTaGAACAGTGGCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KFVETCHGNRKQIQRPKGVCVNL*NSGFRS
Trigger: GGACCTGAAGCCACTGTTCAAGAGGTTCACGCACAC...ACCCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp AAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGTAGGCTACAAGATCCCTaGAGCCCAGGAGTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: KFVETCHGNRKQIQRPKGRLQDP*SPGVPD
Trigger: GTCTGGAACTCCTGGGCTCAAGGGATCTTGTAGCCT...ACCCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp CTCCTGGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTACACGTACAAAGACCTaGGGCATCCTTTATACCGGC +
Preference number: 5 (lower is better)
Translates to: LLVLSLRAHDQLSFTKSPTRTKT*GILYTG
Trigger: GCCGGTATAAAGGATGCCCAAGGTCTTTGTACGTGT...AGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS TCA 90 bp CAGTGGGAACTAAAGTTGCAGATGGAACTAAGGTGGCTAATCAGCTaGCAGCTGGCTCTGAAGATGGAGGAGCCTGAAGTCAAGAATTAC +
Preference number: 5 (lower is better)
Translates to: QWELKLQMELRWLIS*QLALKMEEPEVKNY
Trigger: GTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTCAGCTGATTAGCCACCTTAGTTCCATCTGCAACTTTAGTTCCCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561217.1
CDS-3UTR CAA 90 bp CTCCTGGTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTCGGAAGGACAGGCAGTaGTTGATGTTGGCAATAACA +
Preference number: 5 (lower is better)
Translates to: LLVLSLRAHDQLSFTKSPRKDRQ*LMLAIT
Trigger: TGTTATTGCCAACATCAACAACTGCCTGTCCTTCCG...AGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp TTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTGCCTCGGAAGGACAGGCAGTaGTTGATGTTGGCAATAACA +
Preference number: 5 (lower is better)
Translates to: FLACTRSAIVYKESLVLPRKDRQ*LMLAIT
Trigger: TGTTATTGCCAACATCAACAACTGCCTGTCCTTCCG...AGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp ACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGAGACAAGAGGATCACTaGAACCAGGAGGTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: TKFVETCHGNRKQIQRPKRQEDH*NQEVQA
Trigger: AGCCTGGACCTCCTGGTTCAAGTGATCCTCTTGTCT...CTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559255.1
ENST00000560869.6
CDS-3UTR CAA 90 bp TCCACGAAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAATGGCTCTAGAGGCCTaGGAAGAAGGTCATCATCTT +
Preference number: 5 (lower is better)
Translates to: STKFVETCHGNRKQIQRPMALEA*EEGHHL
Trigger: AAGATGATGACCTTCTTCCAAGGCCTCTAGAGCCAT...TGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTTCGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTTTCTTCTTCTTCCCTTaGGTGAAGACGCAGAACACA +
Preference number: 5 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCFFFFP*VKTQNT
Trigger: TGTGTTCTGCGTCTTCACCAAAGGGAAGAAGAAGAA...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000560562.5
ENST00000560869.6
CDS-3UTR CAA 90 bp GAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAAGGCCAGAAATGATGGCTCTAGAGGCCTaGGAAGAAGGTCATCATCTT +
Preference number: 5 (lower is better)
Translates to: EPEVKNYGQPLKMKRPEMMALEA*EEGHHL
Trigger: AAGATGATGACCTTCTTCCAAGGCCTCTAGAGCCAT...CATTTCTGGCCTTTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp AAGTTTGTGGAAACCTGTCACGGCAATAGGAAACAAATACAGAGGCCAAAGGGTTTCTTCTTCTTCCCTTaGGTGAAGACGCAGAACACA +
Preference number: 5 (lower is better)
Translates to: KFVETCHGNRKQIQRPKGFFFFP*VKTQNT
Trigger: TGTGTTCTGCGTCTTCACCAAAGGGAAGAAGAAGAA...ACCCTTTGGCCTCTGTATTTGTTTCCTATTGCCGTGACAGGTTTCCACAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS-3UTR CAA 90 bp GTTCTTTCCTTGCGTGCACACGATCAGCTATCGTTTACAAAGAGTCCTTGGTGTAAGGACAGGCAGTTGTaGATGTTGGCAATAACATTG +
Preference number: 5 (lower is better)
Translates to: VLSLRAHDQLSFTKSPWCKDRQL*MLAITL
Trigger: CAATGTTATTGCCAACATCAACAACTGCCTGTCCTT...ACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560562.5
ENST00000560670.5
ENST00000560869.6
CDS-3UTR CAA 90 bp GAGCCTGAAGTCAAGAATTACGGTCAGCCTCTAAAAATGAAAAGGCCAGAAATGCAGTGGGAACTAAAGTaGCAGATGGAACTAAGGTGG +
Preference number: 5 (lower is better)
Translates to: EPEVKNYGQPLKMKRPEMQWELK*QMELRW
Trigger: CCACCTTAGTTCCATCTGCAACTTTAGTTCCCACTG...CATTTCTGGCCTTTTCATTTTTAGAGGCTGACCGTAATTCTTGACTTCAGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS TCA 72 bp TCCCCCGATGAGGACACCCGGGCACGGGCGAGGAAGTaGCTCGGCCTGTGTCGCCCGGCCGGGGAGTCACGC +
Preference number: 6 (lower is better)
Translates to: SPDEDTRARARK*LGLCRPAGESR
Trigger: GCGTGACTCCCCGGCCGGGCGACACAGGCCGAGTCACTTCCTCGCCCGTGCCCGGGTGTCCTCATCGGGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS CAA 90 bp ACGCCCAGCACCTGGTCGCGCAGCAGCTCGTACAGCGCCTCCACCTaGCTCTGGCGCCGCACCAGCTCCTCCTCGCTCACACCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: TPSTWSRSSSYSAST*LWRRTSSSSLTPPA
Trigger: GGCGGGCGGTGTGAGCGAGGAGGAGCTGGTGCGGCGCCAGAGCAAGGTGGAGGCGCTGTACGAGCTGCTGCGCGACCAGGTGCTGGGCGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS CCA 72 bp GCGAGAAGCCGCGCGGAGCGGCGGGGAATGGACGTGTaGAAGCGGAGGTCACTTACCGTGTCCCGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: ARSRAERRGMDV*KRRSLTVSRPG
Trigger: GCCAGGCCGGGACACGGTAAGTGACCTCCGCTTCCACACGTCCATTCCCCGCCGCTCCGCGCGGCTTCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS CCA 72 bp CTCCCGGGAGCTCGCTGGGCCCGGCTCCTTCAGTCCTaGGCAGGATGTGGAAGGCGCACCCATCCCCCGATG +
Preference number: 6 (lower is better)
Translates to: LPGARWARLLQS*AGCGRRTHPPM
Trigger: CATCGGGGGATGGGTGCGCCTTCCACATCCTGCCCAGGACTGAAGGAGCCGGGCCCAGCGAGCTCCCGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS GCA 72 bp ACGGCCTCCAGGTCCTCCTTCATGGTGCGGCCCAAGTaGAGAAAGACGCTCTCGGGGACCTCGGCGCCCGCG +
Preference number: 6 (lower is better)
Translates to: TASRSSFMVRPK*RKTLSGTSAPA
Trigger: CGCGGGCGCCGAGGTCCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGGAGGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS GCA 72 bp GCCGCTCCACCACGGCCTCCAGGTCCTCCTTCATGGTaGGGCCCAAGTGCAGAAAGACGCTCTCGGGGACCT +
Preference number: 6 (lower is better)
Translates to: AAPPRPPGPPSW*GPSAERRSRGP
Trigger: AGGTCCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGGAGGCCGTGGTGGAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333007.8
ENST00000560869.6
CDS GCA 72 bp GCCGCTCCACCACGGCCTCCAGGTCCTCCTTCATGGTaGGGCCCAAGTGCAGAAAGACGCTCTCGGGGACTT +
Preference number: 6 (lower is better)
Translates to: AAPPRPPGPPSW*GPSAERRSRGL
Trigger: AAGTCCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGGAGGCCGTGGTGGAGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS CCA 72 bp TCAGCCGCTCCACCACGGCCTCCAGGTCCTCCTTCATaGTGCGGCCCAAGTGCAGAAAGACGCTCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: SAAPPRPPGPPS*CGPSAERRSRG
Trigger: TCCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGGAGGCCGTGGTGGAGCGGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333007.8
ENST00000559406.5
ENST00000560869.6
CDS CCA 72 bp CCCTCACATTGGCCTGGAGGAGGAGGGGCAGGTCACTaGGGCACTATCCCTCACCTCGCTCACCTGGAAGAC +
Preference number: 6 (lower is better)
Translates to: PSHWPGGGGAGH*GTIPHLAHLED
Trigger: GTCTTCCAGGTGAGCGAGGTGAGGGATAGTGCCCCAGTGACCTGCCCCTCCTCCTCCAGGCCAATGTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560428.1
CDS GCA 72 bp CTCACCTCGCTCACCTGGAAGACCCGTCAAGCTCCCTaGCCATGTCCTGTCTGTCTCCGAGCCTCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LTSLTWKTRQAP*PCPVCLRASPL
Trigger: CAGAGGAGAGGCTCGGAGACAGACAGGACATGGGCAGGGAGCTTGACGGGTCTTCCAGGTGAGCGAGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560428.1
CDS CCA 72 bp CAGGTCACTGGGGCACTATCCCTCACCTCGCTCACCTaGAAGACCCGTCAAGCTCCCTGCCCATGTCCTGTC +
Preference number: 6 (lower is better)
Translates to: QVTGALSLTSLT*KTRQAPCPCPV
Trigger: GACAGGACATGGGCAGGGAGCTTGACGGGTCTTCCAGGTGAGCGAGGTGAGGGATAGTGCCCCAGTGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560428.1
CDS TCA 72 bp GCCCAGCGGGTGTGCGTGAACCTCTTGAACAGTGGCTaGGACAGGAGAGGCAGGATGTCTAGTCACGCCCTG +
Preference number: 6 (lower is better)
Translates to: AQRVCVNLLNSG*DRRGRMSSHAL
Trigger: CAGGGCGTGACTAGACATCCTGCCTCTCCTGTCTCAGCCACTGTTCAAGAGGTTCACGCACACCCGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561156.1
CDS GCA 72 bp ACGGCCTCCAGGTCCTCCTTCATGGTGCGGCCCAAGTaGAGAAAGACGCTCTCGGGGACTTCTTCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: TASRSSFMVRPK*RKTLSGTSSSS
Trigger: AGAAGAAGAAGAAGTCCCCGAGAGCGTCTTTCTGCACTTGGGCCGCACCATGAAGGAGGACCTGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559406.5
CDS CCA 72 bp CAACTTTTGGGGGCCTCTAGGCAAGTCGAGGGTGCCTaGCACAGGCTGATGGCTCTAGAGGCCTTGGAAGAA +
Preference number: 6 (lower is better)
Translates to: QLLGASRQVEGA*HRLMALEALEE
Trigger: TTCTTCCAAGGCCTCTAGAGCCATCAGCCTGTGCCAGGCACCCTCGACTTGCCTAGAGGCCCCCAAAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000558056.1
ENST00000559195.5
ENST00000560869.6
CDS CCA 72 bp CTGGAGAGGAAGGGCTTCAGGTCCTCATGCAGGTTCTaGAGCAGGGTGTCAAAGCCGTGGCTCTTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: LERKGFRSSCRF*SRVSKPWLLSS
Trigger: TGAGCTCAAGAGCCACGGCTTTGACACCCTGCTCCAGAACCTGCATGAGGACCTGAAGCCCTTCCTCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561156.1
CDS CCA 72 bp GCTGAGACAGGAGAGGCAGGATGTCTAGTCACGCCCTaGAGAGGAAGGGCTTCAGGTCCTCATGCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: AETGEAGCLVTP*RGRASGPHAGS
Trigger: AGAACCTGCATGAGGACCTGAAGCCCTTCCTCTCCAGGGCGTGACTAGACATCCTGCCTCTCCTGTCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561156.1
CDS TCA 72 bp CTGAGCTGGGCTGACCCTTCTTCTTCTTCCCTTTGGTaGAGACGCAGAACACATTGGCCAGGCCTTTGGACT +
Preference number: 6 (lower is better)
Translates to: LSWADPSSSSLW*RRRTHWPGLWT
Trigger: AGTCCAAAGGCCTGGCCAATGTGTTCTGCGTCTTCACCAAAGGGAAGAAGAAGAAGGGTCAGCCCAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333007.8
ENST00000559195.5
ENST00000560562.5
ENST00000560869.6
CDS TCA 72 bp TTTCTCTTCCAGTTCTGTCTTCCATTCCACCATTGCTaGATCCCGCTCACGGCGGCCCTGGGCTTTATAAGG +
Preference number: 6 (lower is better)
Translates to: FLFQFCLPFHHC*IPLTAALGFIR
Trigger: CCTTATAAAGCCCAGGGCCGCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGACAGAACTGGAAGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559255.1