RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNFAIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000109079

Ensembl transcript IDs: ENST00000226225.7, ENST00000544907.6, ENST00000578158.5, ENST00000582302.2

Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGTCCCTCCTCTaGCCAGACCCTCTGACCTCTGAGCAGGGCCTGTCATGCCTCTGG +
Preference number: 1 (lower is better)
Translates to: SRSAQGQGRGMWSLL*PDPLTSEQGLSCLW
Trigger: CCAGAGGCATGACAGGCCCTGCTCAGAGGTCAGAGGGTCTGGGCAGAGGAGGGACCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR GCA 90 bp CAGGGCCTAGGGGAAGGTTCTCAGCAGGAGGTGGGTCAGTCCATATaGCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATG +
Preference number: 1 (lower is better)
Translates to: QGLGEGSQQEVGQSI*PREQKQLRRAGRVM
Trigger: CATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAACCTTCCCCTAGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR TCA 90 bp ATGTGCCACCTCTGTAGGGGCTGCTGGGAGTTTGCTGTCCTCAGCTaGTGGGCATGCCAGCCAACACCATGCAGTGCCCACGGGCTCCAC +
Preference number: 1 (lower is better)
Translates to: MCHLCRGCWEFAVLS*WACQPTPCSAHGLH
Trigger: GTGGAGCCCGTGGGCACTGCATGGTGTTGGCTGGCATGCCCATCAGCTGAGGACAGCAAACTCCCAGCAGCCCCTACAGAGGTGGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR GCA 90 bp GTTTGCTGTCCTCAGCTGATGGGCATGCCAGCCAACACCATGCAGTaGCCACGGGCTCCACGGTCTTCCTGCCGTGGCTCATGTTTCTGG +
Preference number: 1 (lower is better)
Translates to: VCCPQLMGMPANTMQ*PRAPRSSCRGSCFW
Trigger: CCAGAAACATGAGCCACGGCAGGAAGACCGTGGAGCCCGTGGGCACTGCATGGTGTTGGCTGGCATGCCCATCAGCTGAGGACAGCAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 90 bp CTGGGCAGAACCGCCATCCCAGCCAGCACCAACCAAGAGCATAGATaGTGTGGGCAGGGAGTAGATGTGTGGCCAAGCATGTGCCACCTC +
Preference number: 1 (lower is better)
Translates to: LGRTAIPASTNQEHR*CGQGVDVWPSMCHL
Trigger: GAGGTGGCACATGCTTGGCCACACATCTACTCCCTGCCCACACCATCTATGCTCTTGGTTGGTGCTGGCTGGGATGGCGGTTCTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 90 bp AGGGTGCTTCGGTTGCTCCTGTCATCCCGCGCTCAGAGACACCACTaGGCAGAACCGCCATCCCAGCCAGCACCAACCAAGAGCATAGAT +
Preference number: 1 (lower is better)
Translates to: RVLRLLLSSRAQRHH*AEPPSQPAPTKSID
Trigger: ATCTATGCTCTTGGTTGGTGCTGGCTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGCGCGGGATGACAGGAGCAACCGAAGCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 90 bp CGGGCTCCACGGTCTTCCTGCCGTGGCTCATGTTTCTGGCCCATGTaGCAGCTCTTTGGCTTTACCGTATGTGAGGACAGCATGGCTGGA +
Preference number: 1 (lower is better)
Translates to: RAPRSSCRGSCFWPM*QLFGFTVCEDSMAG
Trigger: TCCAGCCATGCTGTCCTCACATACGGTAAAGCCAAAGAGCTGTCACATGGGCCAGAAACATGAGCCACGGCAGGAAGACCGTGGAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 90 bp TGGCTAGTGCTTGGCATCTCCATGGCTGAGTTACCCAACAAGGAGTaGAGGCCTTCAGGGTGCTTCGGTTGCTCCTGTCATCCCGCGCTC +
Preference number: 1 (lower is better)
Translates to: WLVLGISMAELPNKE*RPSGCFGCSCHPAL
Trigger: GAGCGCGGGATGACAGGAGCAACCGAAGCACCCTGAAGGCCTTCACTCCTTGTTGGGTAACTCAGCCATGGAGATGCCAAGCACTAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 90 bp AGCACCAACCAAGAGCATAGATGGTGTGGGCAGGGAGTAGATGTGTaGCCAAGCATGTGCCACCTCTGTAGGGGCTGCTGGGAGTTTGCT +
Preference number: 1 (lower is better)
Translates to: STNQEHRWCGQGVDV*PSMCHLCRGCWEFA
Trigger: AGCAAACTCCCAGCAGCCCCTACAGAGGTGGCACATGCTTGGCCACACATCTACTCCCTGCCCACACCATCTATGCTCTTGGTTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 90 bp GGCCCATGTGACAGCTCTTTGGCTTTACCGTATGTGAGGACAGCATaGCTGGAAGCCAAGGGTACTCAAGAGAATCACAAAGAGCAGTCG +
Preference number: 1 (lower is better)
Translates to: GPCDSSLALPYVRTA*LEAKGTQENHKEQS
Trigger: CGACTGCTCTTTGTGATTCTCTTGAGTACCCTTGGCTTCCAGCCATGCTGTCCTCACATACGGTAAAGCCAAAGAGCTGTCACATGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 90 bp CACAGGCATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTaGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTA +
Preference number: 1 (lower is better)
Translates to: HRHGEGPRVLSYVGS*HPGGQKKCSVSSLL
Trigger: TAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATGCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR CCA 90 bp AAATTCTTTCCTGCCCAGGACCTGCGCCATCCTTTAGGCCGACCTTaGTCACATACCAAATTCAATAAAACCCAATACTGGCCTGTGTTG +
Preference number: 1 (lower is better)
Translates to: KFFPAQDLRHPLGRP*SHTKFNKTQYWPVL
Trigger: CAACACAGGCCAGTATTGGGTTTTATTGAATTTGGTATGTGACCAAGGTCGGCCTAAAGGATGGCGCAGGTCCTGGGCAGGAAAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 90 bp CTCAAGAGAATCACAAAGAGCAGTCGTGCTAGACCTAGGAGTCAGTaGTGTGACTATGATGTGGGGGTAAAATGTCCTTTCTCACAGGCA +
Preference number: 1 (lower is better)
Translates to: LKRITKSSRARPRSQ*CDYDVGVKCPFSQA
Trigger: TGCCTGTGAGAAAGGACATTTTACCCCCACATCATAGTCACATCACTGACTCCTAGGTCTAGCACGACTGCTCTTTGTGATTCTCTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 90 bp TGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGCACCCTaGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTTAGA +
Preference number: 1 (lower is better)
Translates to: WRRAKGSVICRVLAP*RAKEMLSFLITRFR
Trigger: TCTAAATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR CCA 90 bp GAGCAGAAAGTGGGTACTATACGTGGCTACGTTGCTTTGTTAGGCTaGCAGAACAGTCCCTCCCTGACAGCATTCCTTTGGAAAATAATT +
Preference number: 1 (lower is better)
Translates to: EQKVGTIRGYVALLG*QNSPSLTAFLWKII
Trigger: AATTATTTTCCAAAGGAATGCTGTCAGGGAGGGACTGTTCTGCCAGCCTAACAAAGCAACGTAGCCACGTATAGTACCCACTTTCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 90 bp ACCTTCATCCATACTTTGTTTACTTACCCCTGGGCTGCTTGGAGTTaGAAAATGCACACAGCCAAGAGTTGCTTTCTGAATAGGGCTGGA +
Preference number: 1 (lower is better)
Translates to: TFIHTLFTYPWAAWS*KMHTAKSCFLNRAG
Trigger: TCCAGCCCTATTCAGAAAGCAACTCTTGGCTGTGTGCATTTTTCAACTCCAAGCAGCCCAGGGGTAAGTAAACAAAGTATGGATGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 90 bp GTTAACAGCAGGCTGCCAGGTTTCTCAGAAACTGACAAGAAAATCTaGCCTTCATCCATACTTTGTTTACTTACCCCTGGGCTGCTTGGA +
Preference number: 1 (lower is better)
Translates to: VNSRLPGFSETDKKI*PSSILCLLTPGLLG
Trigger: TCCAAGCAGCCCAGGGGTAAGTAAACAAAGTATGGATGAAGGTCAGATTTTCTTGTCAGTTTCTGAGAAACCTGGCAGCCTGCTGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 90 bp TTAGGCCGACCTTGGTCACATACCAAATTCAATAAAACCCAATACTaGCCTGTGTTGTTAACAGCAGGCTGCCAGGTTTCTCAGAAACTG +
Preference number: 1 (lower is better)
Translates to: LGRPWSHTKFNKTQY*PVLLTAGCQVSQKL
Trigger: CAGTTTCTGAGAAACCTGGCAGCCTGCTGTTAACAACACAGGCCAGTATTGGGTTTTATTGAATTTGGTATGTGACCAAGGTCGGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR GCA 90 bp AGCAACCAAATATTACAGTTATGTGATAAAGGAAAAATTCTTTCCTaGCCAGGACCTGCGCCATCCTTTAGGCCGACCTTGGTCACATAC +
Preference number: 1 (lower is better)
Translates to: SNQILQLCDKGKILS*PGPAPSFRPTLVTY
Trigger: GTATGTGACCAAGGTCGGCCTAAAGGATGGCGCAGGTCCTGGGCAGGAAAGAATTTTTCCTTTATCACATAACTGTAATATTTGGTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 90 bp GCTGACGCATTCCAGTCTCTGTGGGAAAGTCATAAAGCCAAAGCCTaGATTTGGCCAAAGAAGTGGATTTGTCTTTATCTTGTTACCTCA +
Preference number: 1 (lower is better)
Translates to: ADAFQSLWESHKAKA*IWPKKWICLYLVTS
Trigger: TGAGGTAACAAGATAAAGACAAATCCACTTCTTTGGCCAAATTCAGGCTTTGGCTTTATGACTTTCCCACAGAGACTGGAATGCGTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 90 bp GGGATTAGGGTAGAAAGACATGGGTCAAGGAGATTATCAACCTCCTaGATAACAGTACAAAGTGCTTTAAAGAAACAGATCCCACAGGCA +
Preference number: 1 (lower is better)
Translates to: GIRVERHGSRRLSTS*ITVQSALKKQIPQA
Trigger: TGCCTGTGGGATCTGTTTCTTTAAAGCACTTTGTACTGTTATTCAGGAGGTTGATAATCTCCTTGACCCATGTCTTTCTACCCTAATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR TCA 90 bp TGCAGTGCCCACGGGCTCCACGGTCTTCCTGCCGTGGCTCATGTTTCTGGCCCAAGACCCTCTGACCTCTaGGCAGGGCCTGTCATGCCT +
Preference number: 2 (lower is better)
Translates to: CSAHGLHGLPAVAHVSGPRPSDL*AGPVMP
Trigger: AGGCATGACAGGCCCTGCTCAGAGGTCAGAGGGTCT...TGGGCCAGAAACATGAGCCACGGCAGGAAGACCGTGGAGCCCGTGGGCACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR CCA 90 bp GCCTTCAGGGTGCTTCGGTTGCTCCTGTCATCCCGCGCTCAGAGACACCACTGGAGCAGCAGCATGGGGTaGCCAATGGGGCGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: AFRVLRLLLSSRAQRHHWSSSMG*PMGRVP
Trigger: TGGAACCCGCCCCATTGGCCACCCCATGCTGCTGCT...CCAGTGGTGTCTCTGAGCGCGGGATGACAGGAGCAACCGAAGCACCCTGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR CCA 90 bp GACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGTCCCAGCAGCAGCATGGGGTaGCCAATGGGGCGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: DRTQSPEVLRGKAGECGPSSSMG*PMGRVP
Trigger: TGGAACCCGCCCCATTGGCCACCCCATGCTGCTGCT...GGGACCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR CCA 90 bp GAACCGCCATCCCAGCCAGCACCAACCAAGAGCATAGATGGTGTGGGCAGGGAGGCGGGTTCCACAGGATaGGAGATAGGGCCTCCCGTG +
Preference number: 2 (lower is better)
Translates to: EPPSQPAPTKSIDGVGREAGSTG*EIGPPV
Trigger: CACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGC...CTCCCTGCCCACACCATCTATGCTCTTGGTTGGTGCTGGCTGGGATGGCGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR CCA 90 bp GAGCAGATAGGACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAGCGGGTTCCACAGGATaGGAGATAGGGCCTCCCGTG +
Preference number: 2 (lower is better)
Translates to: EQIGQDAVSRSAQGQGRGAGSTG*EIGPPV
Trigger: CACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGC...TCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTCCTATCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR GCA 90 bp TTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCCGGAGCAGGGCCTGTCATaGCTCTGGGTGCTAGAGCAG +
Preference number: 2 (lower is better)
Translates to: FSAGGGSVHMPQGAEAAPEQGLS*LWVLEQ
Trigger: CTGCTCTAGCACCCAGAGGCATGACAGGCCCTGCTC...CGGAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR CCA 90 bp TGGCTGAGTTACCCAACAAGGAGTGAAGGCCTTCAGGGTGCTTCGGTTGCTCCTCAGGCAGCAGCAGCATaGGGTGGCCAATGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: WLSYPTRSEGLQGASVAPQAAAA*GGQWGG
Trigger: CCCGCCCCATTGGCCACCCCATGCTGCTGCTGCCTG...AGGAGCAACCGAAGCACCCTGAAGGCCTTCACTCCTTGTTGGGTAACTCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR TCA 90 bp CACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGAGAGACCCTCTGACCTCTaGGCAGGGCCTGTCATGCCT +
Preference number: 2 (lower is better)
Translates to: HFLHQGLYSTRTAFPPAERPSDL*AGPVMP
Trigger: AGGCATGACAGGCCCTGCTCAGAGGTCAGAGGGTCT...CTCAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR GCA 90 bp TGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGAGGCCTAAGATGTGGTCCCTCCTCTaGCCAGACCCTCTGACCTCT +
Preference number: 2 (lower is better)
Translates to: CTRASTAPELPFPQLRPKMWSLL*PDPLTS
Trigger: AGAGGTCAGAGGGTCTGGGCAGAGGAGGGACCACAT...CTTAGGCCTCAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR CCA 90 bp GTTTGCTGTCCTCAGCTGATGGGCATGCCAGCCAACACCATGCAGTGCCCACGGTGCACTCTGAGCTGCTaGCCAGGCTGCAAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: VCCPQLMGMPANTMQCPRCTLSC*PGCKAR
Trigger: TCTGGCTTTGCAGCCTGGCCAGCAGCTCAGAGTGCA...CCGTGGGCACTGCATGGTGTTGGCTGGCATGCCCATCAGCTGAGGACAGCAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR CCA 90 bp TGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGAGGCCTAAGGTTCTCAGCAGGAGGTaGGTCAGTCCATATGCCCCA +
Preference number: 2 (lower is better)
Translates to: CTRASTAPELPFPQLRPKVLSRR*VSPYAP
Trigger: TGGGGCATATGGACTGACCCACCTCCTGCTGAGAAC...CTTAGGCCTCAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR GCA 90 bp ATTCTTTCCTGCCCAGGACCTGCGCCATCCTTTAGGCCGACCTTGGTCACATACGAGCAGGGCCTGTCATaGCTCTGGGTGCTAGAGCAG +
Preference number: 2 (lower is better)
Translates to: ILSCPGPAPSFRPTLVTYEQGLS*LWVLEQ
Trigger: CTGCTCTAGCACCCAGAGGCATGACAGGCCCTGCTC...GTATGTGACCAAGGTCGGCCTAAAGGATGGCGCAGGTCCTGGGCAGGAAAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR CCA 90 bp GAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGCAAAAGGGCCTGTCATGCCTCTaGGTGCTAGAGCAGAGACCC +
Preference number: 2 (lower is better)
Translates to: EGPRVLSYVGSWHPGGQKGLSCL*VLEQRP
Trigger: GGGTCTCTGCTCTAGCACCCAGAGGCATGACAGGCC...CTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR TCA 90 bp TGGCTGAGTTACCCAACAAGGAGTGAAGGCCTTCAGGGTGCTTCGGTTGCTCCTTCCCCTCCCTCAGATTaGTTCTGCAGGGAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: WLSYPTRSEGLQGASVAPSPPSD*FCREVG
Trigger: CCCCACTTCCCTGCAGAATCAATCTGAGGGAGGGGA...AGGAGCAACCGAAGCACCCTGAAGGCCTTCACTCCTTGTTGGGTAACTCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR GCA 90 bp TGGCTGAGTTACCCAACAAGGAGTGAAGGCCTTCAGGGTGCTTCGGTTGCTCCTATGTGGTCCCTCCTCTaGCCAGACCCTCTGACCTCT +
Preference number: 2 (lower is better)
Translates to: WLSYPTRSEGLQGASVAPMWSLL*PDPLTS
Trigger: AGAGGTCAGAGGGTCTGGGCAGAGGAGGGACCACAT...AGGAGCAACCGAAGCACCCTGAAGGCCTTCACTCCTTGTTGGGTAACTCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CAA 90 bp GGTCTTCCTGCCGTGGCTCATGTTTCTGGCCCATGTGACAGCTCTTaGGCTTTACCGTATGTGAGGACAGCATGGCTGGAAGCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: GLPAVAHVSGPCDSS*ALPYVRTAWLEAKG
Trigger: ACCCTTGGCTTCCAGCCATGCTGTCCTCACATACGGTAAAGCCAAAGAGCTGTCACATGGGCCAGAAACATGAGCCACGGCAGGAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CAA 90 bp GAAAGTCACATTTCCCCTGTCCCGCCGTCATGTCACTTCAGGTCCTaGTGTCTAACCCTGGGTCTGGCATTTGCCCATAGGCTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: ESHISPVPPSCHFRS*CLTLGLAFAHRLCG
Trigger: GCCACAGAGCCTATGGGCAAATGCCAGACCCAGGGTTAGACACAAGGACCTGAAGTGACATGACGGCGGGACAGGGGAAATGTGACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR TCA 90 bp GGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTGCCTTTCCCCCAGCTaGGGCCTAAGGGGCAGTAGC +
Preference number: 2 (lower is better)
Translates to: GSWHPGGQKKCSVSSLLDCLSPS*GLRGSS
Trigger: GCTACTGCCCCTTAGGCCTCAGCTGGGGGAAAGGCA...ATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR GCA 90 bp GGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTGTGGGTCAGTCCATATaGCCCAGGGAGCAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: GSVICRVLAPWRAKEMLSVGQSI*PREQKQ
Trigger: CTGCTTCTGCTCCCTGGGGCATATGGACTGACCCAC...ACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR CCA 90 bp GGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATGGCCTGTCATGCCTCTaGGTGCTAGAGCAGAGACCC +
Preference number: 2 (lower is better)
Translates to: GSWHPGGQKKCSVSSLLDGLSCL*VLEQRP
Trigger: GGGTCTCTGCTCTAGCACCCAGAGGCATGACAGGCC...ATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR CAA 90 bp CCACAGGCATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTaGGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACT +
Preference number: 2 (lower is better)
Translates to: PQAWRRAKGSVICRV*APWRAKEMLSFLIT
Trigger: AGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATGCCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR CCA 90 bp GGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATGTTCTCAGCAGGAGGTaGGTCAGTCCATATGCCCCA +
Preference number: 2 (lower is better)
Translates to: GSWHPGGQKKCSVSSLLDVLSRR*VSPYAP
Trigger: TGGGGCATATGGACTGACCCACCTCCTGCTGAGAAC...ATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR-3UTR CCA 90 bp AATGAAAACCAAAGCCCTAAAGAGGAACTCACCTCCTGGCTAGTGCTTGGCATCCAGGGAGTAGATGTGTaGCCAAGCATGTGCCACCTC +
Preference number: 2 (lower is better)
Translates to: NENQSPKEELTSWLVLGIQGVDV*PSMCHL
Trigger: GAGGTGGCACATGCTTGGCCACACATCTACTCCCTG...GATGCCAAGCACTAGCCAGGAGGTGAGTTCCTCTTTAGGGCTTTGGTTTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR GCA 90 bp GAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGCAAAAGAACTTATCAAGCCTGTaGTTAAACACCTTAGGAAAA +
Preference number: 2 (lower is better)
Translates to: EGPRVLSYVGSWHPGGQKNLSSL*LNTLGK
Trigger: TTTTCCTAAGGTGTTTAAGCACAGGCTTGATAAGTT...CTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR CAA 90 bp TGCTTTGTTAGGCTGGCAGAACAGTCCCTCCCTGACAGCATTCCTTaGGAAAATAATTCAGATAAGCTGAATTCTGGTTTGGCCAAGCCA +
Preference number: 2 (lower is better)
Translates to: CFVRLAEQSLPDSIP*ENNSDKLNSGLAKP
Trigger: TGGCTTGGCCAAACCAGAATTCAGCTTATCTGAATTATTTTCCAAAGGAATGCTGTCAGGGAGGGACTGTTCTGCCAGCCTAACAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR TCA 90 bp TTAGAAAGTCACATTTCCCCTGTCCCGCCGTCATGTCACTTCAGGTCCTTGTGTAGATTATCAACCTCCTaGATAACAGTACAAAGTGCT +
Preference number: 2 (lower is better)
Translates to: LESHISPVPPSCHFRSLCRLSTS*ITVQSA
Trigger: AGCACTTTGTACTGTTATTCAGGAGGTTGATAATCT...ACACAAGGACCTGAAGTGACATGACGGCGGGACAGGGGAAATGTGACTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CAA 90 bp CCTTGGTCACATACCAAATTCAATAAAACCCAATACTGGCCTGTGTaGTTAACAGCAGGCTGCCAGGTTTCTCAGAAACTGACAAGAAAA +
Preference number: 2 (lower is better)
Translates to: PWSHTKFNKTQYWPV*LTAGCQVSQKLTRK
Trigger: TTTTCTTGTCAGTTTCTGAGAAACCTGGCAGCCTGCTGTTAACAACACAGGCCAGTATTGGGTTTTATTGAATTTGGTATGTGACCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR GCA 72 bp CCTCAGCTGATGGGCATGCCAGCCAACACCATGCAGTaGCCACGGGCTCCACGGTCTTCCTGCCGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: PQLMGMPANTMQ*PRAPRSSCRGS
Trigger: TGAGCCACGGCAGGAAGACCGTGGAGCCCGTGGGCACTGCATGGTGTTGGCTGGCATGCCCATCAGCTGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 72 bp GGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTaGGGCCTAAGGGGCAGTAGCCTTCTGCACAGGGCC +
Preference number: 3 (lower is better)
Translates to: GPLQHQNCLSPS*GLRGSSLLHRA
Trigger: GGCCCTGTGCAGAAGGCTACTGCCCCTTAGGCCTCAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR GCA 72 bp GGGGAAGGTTCTCAGCAGGAGGTGGGTCAGTCCATATaGCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: GEGSQQEVGQSI*PREQKQLRRAG
Trigger: TCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAACCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR CCA 72 bp CGGTTGCTCCTGTCATCCCGCGCTCAGAGACACCACTaGGCAGAACCGCCATCCCAGCCAGCACCAACCAAG +
Preference number: 3 (lower is better)
Translates to: RLLLSSRAQRHH*AEPPSQPAPTK
Trigger: CTTGGTTGGTGCTGGCTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGCGCGGGATGACAGGAGCAACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 72 bp GACCCTCTGACCTCTGAGCAGGGCCTGTCATGCCTCTaGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: DPLTSEQGLSCL*VLEQRPRQQQH
Trigger: ATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGACAGGCCCTGCTCAGAGGTCAGAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR TCA 72 bp CTCTGTAGGGGCTGCTGGGAGTTTGCTGTCCTCAGCTaGTGGGCATGCCAGCCAACACCATGCAGTGCCCAC +
Preference number: 3 (lower is better)
Translates to: LCRGCWEFAVLS*WACQPTPCSAH
Trigger: GTGGGCACTGCATGGTGTTGGCTGGCATGCCCATCAGCTGAGGACAGCAAACTCCCAGCAGCCCCTACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 72 bp CATGCAGTGCCCACGGGCTCCACGGTCTTCCTGCCGTaGCTCATGTTTCTGGCCCATGTGACAGCTCTTTGG +
Preference number: 3 (lower is better)
Translates to: HAVPTGSTVFLP*LMFLAHVTALW
Trigger: CCAAAGAGCTGTCACATGGGCCAGAAACATGAGCCACGGCAGGAAGACCGTGGAGCCCGTGGGCACTGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR CAA 90 bp GCCTTCAGGGTGCTTCGGTTGCTCCTGTCATCCCGCGCTCAGAGACACCACTGGATCCCCTCCCTCAGATaGATTCTGCAGGGAAGTGGG +
Preference number: 3 (lower is better)
Translates to: AFRVLRLLLSSRAQRHHWIPSLR*ILQGSG
Trigger: CCCACTTCCCTGCAGAATCAATCTGAGGGAGGGGAT...CCAGTGGTGTCTCTGAGCGCGGGATGACAGGAGCAACCGAAGCACCCTGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR CAA 90 bp GAACCGCCATCCCAGCCAGCACCAACCAAGAGCATAGATGGTGTGGGCAGGGAGGTCATATGTAGGGTCTaGGCACCCTGGAGGGCAAAA +
Preference number: 3 (lower is better)
Translates to: EPPSQPAPTKSIDGVGREVICRV*APWRAK
Trigger: TTTTGCCCTCCAGGGTGCCAAGACCCTACATATGAC...CTCCCTGCCCACACCATCTATGCTCTTGGTTGGTGCTGGCTGGGATGGCGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 72 bp CAAGAGCATAGATGGTGTGGGCAGGGAGTAGATGTGTaGCCAAGCATGTGCCACCTCTGTAGGGGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: QEHRWCGQGVDV*PSMCHLCRGCW
Trigger: CCAGCAGCCCCTACAGAGGTGGCACATGCTTGGCCACACATCTACTCCCTGCCCACACCATCTATGCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR-3UTR CAA 90 bp CCGTCATGTCACTTCAGGTCCTTGTGTCTAACCCTGGGTCTGGCATTTGCCCATTTCAGGGTGCTTCGGTaGCTCCTGTCATCCCGCGCT +
Preference number: 3 (lower is better)
Translates to: PSCHFRSLCLTLGLAFAHFRVLR*LLSSRA
Trigger: AGCGCGGGATGACAGGAGCAACCGAAGCACCCTGAA...ATGGGCAAATGCCAGACCCAGGGTTAGACACAAGGACCTGAAGTGACATGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR GCA 72 bp GTAAAATGTCCTTTCTCACAGGCACCCTGTGAGGACTaGCGGTCCCAGCTTAGCCATCCTTCCCTCCTCGGT +
Preference number: 3 (lower is better)
Translates to: VKCPFSQAPCED*RSQLSHPSLLG
Trigger: ACCGAGGAGGGAAGGATGGCTAAGCTGGGACCGGCAGTCCTCACAGGGTGCCTGTGAGAAAGGACATTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 72 bp CGGTCTTCCTGCCGTGGCTCATGTTTCTGGCCCATGTaGCAGCTCTTTGGCTTTACCGTATGTGAGGACAGC +
Preference number: 3 (lower is better)
Translates to: RSSCRGSCFWPM*QLFGFTVCEDS
Trigger: GCTGTCCTCACATACGGTAAAGCCAAAGAGCTGTCACATGGGCCAGAAACATGAGCCACGGCAGGAAGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 72 bp GGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTaGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTCC +
Preference number: 3 (lower is better)
Translates to: GEGPRVLSYVGS*HPGGQKKCSVS
Trigger: GGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR GCA 72 bp CAAAGAGCAGAAAGTGGGTACTATACGTGGCTACGTTaGTTTGTTAGGCTGGCAGAACAGTCCCTCCCTGAC +
Preference number: 3 (lower is better)
Translates to: QRAESGYYTWLR*FVRLAEQSLPD
Trigger: GTCAGGGAGGGACTGTTCTGCCAGCCTAACAAAGCAACGTAGCCACGTATAGTACCCACTTTCTGCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 72 bp CCTGCCCAGGACCTGCGCCATCCTTTAGGCCGACCTTaGTCACATACCAAATTCAATAAAACCCAATACTGG +
Preference number: 3 (lower is better)
Translates to: PAQDLRHPLGRP*SHTKFNKTQYW
Trigger: CCAGTATTGGGTTTTATTGAATTTGGTATGTGACCAAGGTCGGCCTAAAGGATGGCGCAGGTCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 72 bp CAAGCATCACAACACCTCAGTGGGGAGCTGGGAATTTaGGTGTTAAAGGACCTCAAGAGGGCAGCTGAGAAA +
Preference number: 3 (lower is better)
Translates to: QASQHLSGELGI*VLKDLKRAAEK
Trigger: TTTCTCAGCTGCCCTCTTGAGGTCCTTTAACACTCAAATTCCCAGCTCCCCACTGAGGTGTTGTGATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 72 bp AATGAAAACCAAAGCCCTAAAGAGGAACTCACCTCCTaGCTAGTGCTTGGCATCTCCATGGCTGAGTTACCC +
Preference number: 3 (lower is better)
Translates to: NENQSPKEELTS*LVLGISMAELP
Trigger: GGGTAACTCAGCCATGGAGATGCCAAGCACTAGCCAGGAGGTGAGTTCCTCTTTAGGGCTTTGGTTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 72 bp GCCAAGGGTTCTGTCATATGTAGGGTCTTGGCACCCTaGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACT +
Preference number: 3 (lower is better)
Translates to: AKGSVICRVLAP*RAKEMLSFLIT
Trigger: AGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR CCA 72 bp GACAGCTCTTTGGCTTTACCGTATGTGAGGACAGCATaGCTGGAAGCCAAGGGTACTCAAGAGAATCACAAA +
Preference number: 3 (lower is better)
Translates to: DSSLALPYVRTA*LEAKGTQENHK
Trigger: TTTGTGATTCTCTTGAGTACCCTTGGCTTCCAGCCATGCTGTCCTCACATACGGTAAAGCCAAAGAGCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 72 bp GTACAAAGTGCTTTAAAGAAACAGATCCCACAGGCATaGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTC +
Preference number: 3 (lower is better)
Translates to: VQSALKKQIPQA*RRAKGSVICRV
Trigger: GACCCTACATATGACAGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCTGTTTCTTTAAAGCACTTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR TCA 72 bp ATCACAAAGAGCAGTCGTGCTAGACCTAGGAGTCAGTaGTGTGACTATGATGTGGGGGTAAAATGTCCTTTC +
Preference number: 3 (lower is better)
Translates to: ITKSSRARPRSQ*CDYDVGVKCPF
Trigger: GAAAGGACATTTTACCCCCACATCATAGTCACATCACTGACTCCTAGGTCTAGCACGACTGCTCTTTGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 72 bp AGGCTGCCAGGTTTCTCAGAAACTGACAAGAAAATCTaGCCTTCATCCATACTTTGTTTACTTACCCCTGGG +
Preference number: 3 (lower is better)
Translates to: RLPGFSETDKKI*PSSILCLLTPG
Trigger: CCCAGGGGTAAGTAAACAAAGTATGGATGAAGGTCAGATTTTCTTGTCAGTTTCTGAGAAACCTGGCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CCA 72 bp CCTTGGTCACATACCAAATTCAATAAAACCCAATACTaGCCTGTGTTGTTAACAGCAGGCTGCCAGGTTTCT +
Preference number: 3 (lower is better)
Translates to: PWSHTKFNKTQY*PVLLTAGCQVS
Trigger: AGAAACCTGGCAGCCTGCTGTTAACAACACAGGCCAGTATTGGGTTTTATTGAATTTGGTATGTGACCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 72 bp CATACTTTGTTTACTTACCCCTGGGCTGCTTGGAGTTaGAAAATGCACACAGCCAAGAGTTGCTTTCTGAAT +
Preference number: 3 (lower is better)
Translates to: HTLFTYPWAAWS*KMHTAKSCFLN
Trigger: ATTCAGAAAGCAACTCTTGGCTGTGTGCATTTTTCAACTCCAAGCAGCCCAGGGGTAAGTAAACAAAGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR TCA 72 bp CAAAGAAGTGGATTTGTCTTTATCTTGTTACCTCAATaGGGGCTGGAAGAACTAGTAGCTGATCACCAAGGT +
Preference number: 3 (lower is better)
Translates to: QRSGFVFILLPQ*GLEELVADHQG
Trigger: ACCTTGGTGATCAGCTACTAGTTCTTCCAGCCCTCATTGAGGTAACAAGATAAAGACAAATCCACTTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp TCATGCCTCTGGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCATGGGGTGGCCCGACTCCGCCCGGAGTaGTGCCCAGCCCAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SCLWVLEQRPRQQQHGVARLRPE*CPAQPA
Trigger: AGCCGGCTGGGCTGGGCAGCACTCCGGGCGGAGTCG...GGCCACCCCATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544907.6
CDS-3UTR CCA 90 bp TGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCCTCCTCTCAGCTGGGTaGCCAGCGGACTCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: WGGQWGGFHRMGDRASRALLSAG*PADSEP
Trigger: CGGCTCGGAGTCCGCTGGCCACCCAGCTGAGAGGAG...GGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GGGCCTGTCATGCCTCTGGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCATGGCAGGCAGCAGCAGCATaGGGTGGCCAATGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GPVMPLGARAETQAAAAWQAAAA*GGQWGG
Trigger: CCCGCCCCATTGGCCACCCCATGCTGCTGCTGCCTG...CCATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGACAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp TCCTGTCATCCCGCGCTCAGAGACACCACTGGGCAGAACCGCCATCCCAGCCAGCGTGCCCTGACTCCCTaGGGGTCTGGTCAGTCGCGA +
Preference number: 4 (lower is better)
Translates to: SCHPALRDTTGQNRHPSQRALTP*GSGQSR
Trigger: TCGCGACTGACCAGACCCTCAGGGAGTCAGGGCACG...CTGGCTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGCGCGGGATGACAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp ATGCCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATGGTGAGCAGCGTGCCCTGACTCCCTaGGGGTCTGGTCAGTCGCGA +
Preference number: 4 (lower is better)
Translates to: MPQGAEAAPSGRKGDGEQRALTP*GSGQSR
Trigger: TCGCGACTGACCAGACCCTCAGGGAGTCAGGGCACG...CTGCTCACCATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp TGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCAGACCCTCTGACCTCTaGGCAGGGCCTGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: WGGQWGGFHRMGDRASRARPSDL*AGPVMP
Trigger: AGGCATGACAGGCCCTGCTCAGAGGTCAGAGGGTCT...GGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR GCA 90 bp AGACGTCCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCGAGCCGCCCCTAGCCTaGAGCCGCCTGCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RRPTFCTRASTAPELPFPEPPLA*SRLPLS
Trigger: GCTGAGGGGCAGGCGGCTGCAGGCTAGGGGCGGCTC...GGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGGACGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp AGACCCAGGCAGCAGCAGCATGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGAGGGTCACGAGTGAGTaGCCAGTGGAGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RPRQQQHGVANGAGSTGWRVTSE*PVEARA
Trigger: GGCTCTGGCCTCCACTGGCCACTCACTCGTGACCCT...CCATCCTGTGGAACCCGCCCCATTGGCCACCCCATGCTGCTGCTGCCTGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp TGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCGGCCTGTCATGCCTCTaGGTGCTAGAGCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: WGGQWGGFHRMGDRASRAGLSCL*VLEQRP
Trigger: GGGTCTCTGCTCTAGCACCCAGAGGCATGACAGGCC...GGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp ATAGGACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGGGGCCTCCCGTGCCCTaGCTCCCTGAGGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: IGQDAVSRSAQGQGRGMWGPPVP*LPEGLV
Trigger: GACCAGACCCTCAGGGAGTCAGGGCACGGGAGGCCC...CCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTCCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp TCATGCCTCTGGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCATGGGGTGGCCTGCCTTTCCCCCAGCTaGGGCCTAAGGGGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SCLWVLEQRPRQQQHGVACLSPS*GLRGSS
Trigger: GCTACTGCCCCTTAGGCCTCAGCTGGGGGAAAGGCA...GGCCACCCCATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR GCA 90 bp CCTGTCATCCCGCGCTCAGAGACACCACTGGGCAGAACCGCCATCCCAGCCAGCGAGCAGGGCCTGTCATaGCTCTGGGTGCTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PVIPRSETPLGRTAIPASEQGLS*LWVLEQ
Trigger: CTGCTCTAGCACCCAGAGGCATGACAGGCCCTGCTC...GCTGGCTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGCGCGGGATGACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp TGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCCACCTCTGTAGGGGCTaGTGGGAGTTTGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: WGGQWGGFHRMGDRASRAHLCRG*WEFAVL
Trigger: GAGGACAGCAAACTCCCAGCAGCCCCTACAGAGGTG...GGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp TCATGCCTCTGGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCATGGGGTGGCCTCACTGGGGGAAGCCTaGCTGCGGCTACGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SCLWVLEQRPRQQQHGVASLGEA*LRLRLV
Trigger: CACAAGCCGTAGCCGCAGCCAGGCTTCCCCCAGTGA...GGCCACCCCATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp TCATGCCTCTGGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCATGGGGTGGCCCGATGGGTAGACTGGTaGCCGAGCTGCCGGTCATCG +
Preference number: 4 (lower is better)
Translates to: SCLWVLEQRPRQQQHGVARWVDW*PSCRSS
Trigger: CGATGACCGGCAGCTCGGCCACCAGTCTACCCATCG...GGCCACCCCATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp ATGCCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATGGTGAGCAGGCGGGTTCCACAGGATaGGAGATAGGGCCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: MPQGAEAAPSGRKGDGEQAGSTG*EIGPPV
Trigger: CACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGC...CTGCTCACCATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp CCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGCAGGCAGCAGCAGCATaGGGTGGCCAATGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PTFCTRASTAPELPFPQLQAAAA*GGQWGG
Trigger: CCCGCCCCATTGGCCACCCCATGCTGCTGCTGCCTG...CAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp GGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCCTGACTGAGAGCCGCCCACGTTaGGCTGGACATACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GQWGGFHRMGDRASRALTESRPR*AGHTCC
Trigger: GCAACAAGTATGTCCAGCTCAACGTGGGCGGCTCTC...AGTCAGGGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GGGCCTGTCATGCCTCTGGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCATGGAAGTGCTGTAGCGCTTaGCGTGGATGCGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: GPVMPLGARAETQAAAAWKCCSA*RGCGGH
Trigger: GTGTCCGCCGCATCCACGTCAAGCGCTACAGCACTT...CCATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGACAGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp AGGCAGCAGCAGCATGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATATGCCTTTCCCCCAGCTaGGGCCTAAGGGGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: RQQQHGVANGAGSTGWEICLSPS*GLRGSS
Trigger: GCTACTGCCCCTTAGGCCTCAGCTGGGGGAAAGGCA...TATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCATGCTGCTGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR GCA 90 bp GCCTTCAGGGTGCTTCGGTTGCTCCTGTCATCCCGCGCTCAGAGACACCACTGGGGTACAGCACACCTCTaGCAGCTTACGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: AFRVLRLLLSSRAQRHHWGTAHL*QLTALA
Trigger: GGCCAGGGCCGTAAGCTGGCAGAGGTGTGCTGTACC...CCAGTGGTGTCTCTGAGCGCGGGATGACAGGAGCAACCGAAGCACCCTGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp GACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGTCCCCGGTGCACTCTGAGCTaGTGGCCAGGCTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: DRTQSPEVLRGKAGECGPRCTLS*WPGCKA
Trigger: GGCTTTGCAGCCTGGCCAGCAGCTCAGAGTGCACCG...GGGACCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp GCCTTCAGGGTGCTTCGGTTGCTCCTGTCATCCCGCGCTCAGAGACACCACTGGGCCAACACCATGCAGTaGCCACGGGCTCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: AFRVLRLLLSSRAQRHHWANTMQ*PRAPRS
Trigger: AGACCGTGGAGCCCGTGGGCACTGCATGGTGTTGGC...CCAGTGGTGTCTCTGAGCGCGGGATGACAGGAGCAACCGAAGCACCCTGAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp GAGCAGATAGGACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAGCCTCTCCTCTCAGCTaGGTGGCCAGCGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: EQIGQDAVSRSAQGQGRGASPLS*VASGLR
Trigger: TCGGAGTCCGCTGGCCACCCAGCTGAGAGGAGAGGC...TCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTCCTATCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GCCTTCAGGGTGCTTCGGTTGCTCCTGTCATCCCGCGCTCAGAGACACCACTGGTCACTGGGGGAAGCCTaGCTGCGGCTACGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: AFRVLRLLLSSRAQRHHWSLGEA*LRLRLV
Trigger: CACAAGCCGTAGCCGCAGCCAGGCTTCCCCCAGTGA...CCAGTGGTGTCTCTGAGCGCGGGATGACAGGAGCAACCGAAGCACCCTGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp AGGCAGCAGCAGCATGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGCGGGTTCCACAGGATaGGAGATAGGGCCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: RQQQHGVANGAGSTGWEIAGSTG*EIGPPV
Trigger: CACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGC...TATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCATGCTGCTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp ATATGCCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATGGTGAGCGCATGGGGTGGCCAATaGGGCGGGTTCCACAGGATG +
Preference number: 4 (lower is better)
Translates to: ICPREQKQLRRAGRVMVSAWGGQ*GGFHRM
Trigger: CATCCTGTGGAACCCGCCCCATTGGCCACCCCATGC...GCTCACCATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCATAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp TGCAGTGCCCACGGGCTCCACGGTCTTCCTGCCGTGGCTCATGTTTCTGGCCCAGGCCTGTCATGCCTCTaGGTGCTAGAGCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: CSAHGLHGLPAVAHVSGPGLSCL*VLEQRP
Trigger: GGGTCTCTGCTCTAGCACCCAGAGGCATGACAGGCC...TGGGCCAGAAACATGAGCCACGGCAGGAAGACCGTGGAGCCCGTGGGCACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp TGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCGTTCTCAGCAGGAGGTaGGTCAGTCCATATGCCCCA +
Preference number: 4 (lower is better)
Translates to: WGGQWGGFHRMGDRASRAVLSRR*VSPYAP
Trigger: TGGGGCATATGGACTGACCCACCTCCTGCTGAGAAC...GGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp TCATGCCTCTGGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCATGGGGTGGCCGGTTCTGAGGGAGGGTaGTGGTGTCATCTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: SCLWVLEQRPRQQQHGVAGSEGG*WCHLGG
Trigger: ACCTCCGAGATGACACCATCACCCTCCCTCAGAACC...GGCCACCCCATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp TTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCCGAGAGCACGCGGCCGTTaGAGCGCAGGGAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: FSAGGGSVHMPQGAEAAPRARGR*SAGRAC
Trigger: ACAAGCTCTCCCTGCGCTTCAACGGCCGCGTGCTCT...CGGAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR GCA 90 bp GACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGTCCCTCAGGGTGCTTCGGTTaGTCCTGTCATCCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: DRTQSPEVLRGKAGECGPSGCFG*SCHPAL
Trigger: GAGCGCGGGATGACAGGAGCAACCGAAGCACCCTGA...GGGACCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp CACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGAGGCCTCTCCTCTCAGCTaGGTGGCCAGCGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: HFLHQGLYSTRTAFPPAEASPLS*VASGLR
Trigger: TCGGAGTCCGCTGGCCACCCAGCTGAGAGGAGAGGC...CTCAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GAGCAGATAGGACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGATCGCGATGGGTAGACTaGTGGCCGAGCTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: EQIGQDAVSRSAQGQGRGSRWVD*WPSCRS
Trigger: TGACCGGCAGCTCGGCCACCAGTCTACCCATCGCGA...TCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTCCTATCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp TTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCCGTCGCGATGGGTAGACTaGTGGCCGAGCTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: FSAGGGSVHMPQGAEAAPSRWVD*WPSCRS
Trigger: TGACCGGCAGCTCGGCCACCAGTCTACCCATCGCGA...CGGAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp CCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGAGCAGCAGCATGGGGTaGCCAATGGGGCGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PTFCTRASTAPELPFPQLSSSMG*PMGRVP
Trigger: TGGAACCCGCCCCATTGGCCACCCCATGCTGCTGCT...CAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCCTGACTCAGATCCCACAGGCATaGAGAAGGGCCAAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GQWGGFHRMGDRASRALTQIPQA*RRAKGS
Trigger: AGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCTG...AGTCAGGGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp AGACGTCCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCAGAGCACGCGGCCGTTaGAGCGCAGGGAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RRPTFCTRASTAPELPFPRARGR*SAGRAC
Trigger: ACAAGCTCTCCCTGCGCTTCAACGGCCGCGTGCTCT...GGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGGACGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp CCTGTCATCCCGCGCTCAGAGACACCACTGGGCAGAACCGCCATCCCAGCCAGCTGGCTTTACCGTATGTaGGGACAGCATGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PVIPRSETPLGRTAIPASWLYRM*GQHGWK
Trigger: CTTCCAGCCATGCTGTCCTCACATACGGTAAAGCCA...GCTGGCTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGCGCGGGATGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp CTAGGGGAAGGTTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGGAGCAGGGCCTGTCATaGCTCTGGGTGCTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGEGSQQEVGQSICPREQEQGLS*LWVLEQ
Trigger: CTGCTCTAGCACCCAGAGGCATGACAGGCCCTGCTC...CTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAACCTTCCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR GCA 90 bp ATATGCCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATGGTGAGCGTGGGTCAGTCCATATaGCCCAGGGAGCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ICPREQKQLRRAGRVMVSVGQSI*PREQKQ
Trigger: CTGCTTCTGCTCCCTGGGGCATATGGACTGACCCAC...GCTCACCATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR GCA 90 bp GAGCAGATAGGACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAGGGCTGCTGGGAGTTTaGTGTCCTCAGCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: EQIGQDAVSRSAQGQGRGGLLGV*CPQLMG
Trigger: GCCCATCAGCTGAGGACAGCAAACTCCCAGCAGCCC...TCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTCCTATCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp GGTTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCGTGTGGCCAAGCATGTaGCACCTCTGTAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GSQQEVGQSICPREQKQLVWPSM*HLCRGC
Trigger: GCAGCCCCTACAGAGGTGGCACATGCTTGGCCACAC...GAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp TGGCTGAGTTACCCAACAAGGAGTGAAGGCCTTCAGGGTGCTTCGGTTGCTCCTCTCCTCTCAGCTGGGTaGCCAGCGGACTCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: WLSYPTRSEGLQGASVAPLLSAG*PADSEP
Trigger: CGGCTCGGAGTCCGCTGGCCACCCAGCTGAGAGGAG...AGGAGCAACCGAAGCACCCTGAAGGCCTTCACTCCTTGTTGGGTAACTCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp ATATGCCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATGGTGAGCAAGGCTCCGCCGTGGTaGAAAGGGTCACGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ICPREQKQLRRAGRVMVSKAPPW*KGSRVS
Trigger: ACTCACTCGTGACCCTTTCCACCACGGCGGAGCCTT...GCTCACCATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp GAGCAGATAGGACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGATGGAAGGCTCCGCCGTaGTGGAAAGGGTCACGAGTG +
Preference number: 4 (lower is better)
Translates to: EQIGQDAVSRSAQGQGRGWKAPP*WKGSRV
Trigger: CACTCGTGACCCTTTCCACCACGGCGGAGCCTTCCA...TCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTCCTATCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp CCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGTCAGGGCCCGCACAGTaGTGTAGTACAGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PTFCTRASTAPELPFPQLSGPAQ*CSTESR
Trigger: GCGGCTCTCTGTACTACACCACTGTGCGGGCCCTGA...CAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp CCTGTCATCCCGCGCTCAGAGACACCACTGGGCAGAACCGCCATCCCAGCCAGCCTGGGAATTCCACCTTaGTCTGCTTCTTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: PVIPRSETPLGRTAIPASLGIPP*SASSPW
Trigger: CCACGGAGAAGAAGCAGACCAAGGTGGAATTCCCAG...GCTGGCTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGCGCGGGATGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp TGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCATAGATTCGGGCCTCTaGGAATTCCACCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: WGGQWGGFHRMGDRASRAIDSGL*EFHLGL
Trigger: CAGACCAAGGTGGAATTCCCAGAGGCCCGAATCTAT...GGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp TTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCCGTCTCCTCATCTTCACTaGGGGAAGCCTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: FSAGGGSVHMPQGAEAAPSPHLH*GKPGCG
Trigger: GCCGCAGCCAGGCTTCCCCCAGTGAAGATGAGGAGA...CGGAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp ATATGCCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATGGTGAGCGACTCCCTGAGGGTCTaGTCAGTCGCGATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ICPREQKQLRRAGRVMVSDSLRV*SVAMGR
Trigger: TCTACCCATCGCGACTGACCAGACCCTCAGGGAGTC...GCTCACCATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp ACGTCCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCATGGGGTGGCCAATaGGGCGGGTTCCACAGGATG +
Preference number: 4 (lower is better)
Translates to: TSHFLHQGLYSTRTAFPPAWGGQ*GGFHRM
Trigger: CATCCTGTGGAACCCGCCCCATTGGCCACCCCATGC...TGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp TGCAGTGCCCACGGGCTCCACGGTCTTCCTGCCGTGGCTCATGTTTCTGGCCCACAGGGAGTAGATGTGTaGCCAAGCATGTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: CSAHGLHGLPAVAHVSGPQGVDV*PSMCHL
Trigger: GAGGTGGCACATGCTTGGCCACACATCTACTCCCTG...TGGGCCAGAAACATGAGCCACGGCAGGAAGACCGTGGAGCCCGTGGGCACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp CTAGGGGAAGGTTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGCCAGTGGTCTCAGGCTaGCGCATTCCAGTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LGEGSQQEVGQSICPREQPVVSG*RIPVSV
Trigger: CACAGAGACTGGAATGCGTCAGCCTGAGACCACTGG...CTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAACCTTCCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp ATAGGACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGTTCCACAACGGTCTATaGGGATCCAGCCGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: IGQDAVSRSAQGQGRGMWFHNGL*GSSRPR
Trigger: CCGGGGACGGCTGGATCCTCATAGACCGTTGTGGAA...CCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544907.6
CDS-3UTR GCA 90 bp GTTTGCTGTCCTCAGCTGATGGGCATGCCAGCCAACACCATGCAGTGCCCACGGATGTGGTCCCTCCTCTaGCCAGACCCTCTGACCTCT +
Preference number: 4 (lower is better)
Translates to: VCCPQLMGMPANTMQCPRMWSLL*PDPLTS
Trigger: AGAGGTCAGAGGGTCTGGGCAGAGGAGGGACCACAT...CCGTGGGCACTGCATGGTGTTGGCTGGCATGCCCATCAGCTGAGGACAGCAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp CATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGCGATGGGTAGACTGGTaGCCGAGCTGCCGGTCATCG +
Preference number: 4 (lower is better)
Translates to: HGEGPRVLSYVGSWHPGGRWVDW*PSCRSS
Trigger: CGATGACCGGCAGCTCGGCCACCAGTCTACCCATCG...CCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GACCCTCTGACCTCTGAGCAGGGCCTGTCATGCCTCTGGGTGCTAGAGCAGAGAGACTCCCTGAGGGTCTaGTCAGTCGCGATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: DPLTSEQGLSCLWVLEQRDSLRV*SVAMGR
Trigger: TCTACCCATCGCGACTGACCAGACCCTCAGGGAGTC...TCTCTGCTCTAGCACCCAGAGGCATGACAGGCCCTGCTCAGAGGTCAGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGTCCCCAGATCCCACAGGCATaGAGAAGGGCCAAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: DRTQSPEVLRGKAGECGPQIPQA*RRAKGS
Trigger: AGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCTG...GGGACCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
3UTR CAA 72 bp ACCCAACAAGGAGTGAAGGCCTTCAGGGTGCTTCGGTaGCTCCTGTCATCCCGCGCTCAGAGACACCACTGG +
Preference number: 4 (lower is better)
Translates to: TQQGVKAFRVLR*LLSSRAQRHHW
Trigger: CCAGTGGTGTCTCTGAGCGCGGGATGACAGGAGCAACCGAAGCACCCTGAAGGCCTTCACTCCTTGTTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GAACCGCCATCCCAGCCAGCACCAACCAAGAGCATAGATGGTGTGGGCAGGGAGTGGTGGAGGATTCGATaGGCCGCTCCTCCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: EPPSQPAPTKSIDGVGREWWRIR*AAPPPL
Trigger: TAAAGGAGGAGGAGCGGCTCATCGAATCCTCCACCA...CTCCCTGCCCACACCATCTATGCTCTTGGTTGGTGCTGGCTGGGATGGCGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GGTTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCTGGTGGAGGATTCGATaGGCCGCTCCTCCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: GSQQEVGQSICPREQKQLWWRIR*AAPPPL
Trigger: TAAAGGAGGAGGAGCGGCTCATCGAATCCTCCACCA...GAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GACCCTCTGACCTCTGAGCAGGGCCTGTCATGCCTCTGGGTGCTAGAGCAGAGACCGCCCACGTTGAGCTaGACATACTTGTTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: DPLTSEQGLSCLWVLEQRPPTLS*TYLLPN
Trigger: GTTGGGCAACAAGTATGTCCAGCTCAACGTGGGCGG...TCTCTGCTCTAGCACCCAGAGGCATGACAGGCCCTGCTCAGAGGTCAGAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp AGACCCAGGCAGCAGCAGCATGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGATGTTTTTCAGCAGGTaGTCGTCAGAGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RPRQQQHGVANGAGSTGWMFFSR*SSELLV
Trigger: CACCAGCAACTCTGACGACCACCTGCTGAAAAACAT...CCATCCTGTGGAACCCGCCCCATTGGCCACCCCATGCTGCTGCTGCCTGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp AGGCAGCAGCAGCATGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATACTGGGAATTCCACCTTaGTCTGCTTCTTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: RQQQHGVANGAGSTGWEILGIPP*SASSPW
Trigger: CCACGGAGAAGAAGCAGACCAAGGTGGAATTCCCAG...TATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCATGCTGCTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp CATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGTCTGGTCAGTCGCGATaGGTAGACTGGTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: HGEGPRVLSYVGSWHPGGSGQSR*VDWWPS
Trigger: GCTCGGCCACCAGTCTACCCATCGCGACTGACCAGA...CCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp CATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGGCTCAGAGACACCACTaGGCAGAACCGCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: HGEGPRVLSYVGSWHPGGAQRHH*AEPPSQ
Trigger: CTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGC...CCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp TGCAGTGCCCACGGGCTCCACGGTCTTCCTGCCGTGGCTCATGTTTCTGGCCCATTCCACAACGGTCTATaGGGATCCAGCCTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: CSAHGLHGLPAVAHVSGPFHNGL*GSSLLC
Trigger: ACAAAGAAGGCTGGATCCTCATAGACCGTTGTGGAA...TGGGCCAGAAACATGAGCCACGGCAGGAAGACCGTGGAGCCCGTGGGCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGTCCCTCACCAGCCCCTGGATaGGGTAATACTTTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DRTQSPEVLRGKAGECGPSPAPG*GNTLLQ
Trigger: CTGAAGCAAAGTATTACCTCATCCAGGGGCTGGTGA...GGGACCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp AATGAAAACCAAAGCCCTAAAGAGGAACTCACCTCCTGGCTAGTGCTTGGCATCGGGCCTCCCGTGCCCTaGCTCCCTGAGGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: NENQSPKEELTSWLVLGIGPPVP*LPEGLV
Trigger: GACCAGACCCTCAGGGAGTCAGGGCACGGGAGGCCC...GATGCCAAGCACTAGCCAGGAGGTGAGTTCCTCTTTAGGGCTTTGGTTTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp ATTCTTTCCTGCCCAGGACCTGCGCCATCCTTTAGGCCGACCTTGGTCACATACAGACCCTCTGACCTCTaGGCAGGGCCTGTCATGCCT +
Preference number: 4 (lower is better)
Translates to: ILSCPGPAPSFRPTLVTYRPSDL*AGPVMP
Trigger: AGGCATGACAGGCCCTGCTCAGAGGTCAGAGGGTCT...GTATGTGACCAAGGTCGGCCTAAAGGATGGCGCAGGTCCTGGGCAGGAAAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GGTTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCTTACCCAACAAGGAGTaGAGGCCTTCAGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GSQQEVGQSICPREQKQLLPNKE*RPSGCF
Trigger: GAAGCACCCTGAAGGCCTTCACTCCTTGTTGGGTAA...GAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp CCGTCATGTCACTTCAGGTCCTTGTGTCTAACCCTGGGTCTGGCATTTGCCCATTGCCAGCCAACACCATaGAGTGCCCACGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PSCHFRSLCLTLGLAFAHCQPTP*SAHGLH
Trigger: GTGGAGCCCGTGGGCACTGCATGGTGTTGGCTGGCA...ATGGGCAAATGCCAGACCCAGGGTTAGACACAAGGACCTGAAGTGACATGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp CCTGTCATCCCGCGCTCAGAGACACCACTGGGCAGAACCGCCATCCCAGCCAGCGTCAGAGAAGATAAATaGCCAGTCCCAGACTACTGT +
Preference number: 4 (lower is better)
Translates to: PVIPRSETPLGRTAIPASVREDK*PVPDYC
Trigger: ACAGTAGTCTGGGACTGGGCATTTATCTTCTCTGAC...GCTGGCTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGCGCGGGATGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp TCATGCCTCTGGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCATGGGGTGGCCCACACAGCCAAGAGTTaGTTTCTGAATAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SCLWVLEQRPRQQQHGVAHTAKS*FLNRAG
Trigger: TCCAGCCCTATTCAGAAAGCAACTCTTGGCTGTGTG...GGCCACCCCATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp CCTGTCATCCCGCGCTCAGAGACACCACTGGGCAGAACCGCCATCCCAGCCAGCTACTTACCCCTGGGCTaGTTGGAGTTGAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: PVIPRSETPLGRTAIPASYLPLG*LELKNA
Trigger: TGCATTTTTCAACTCCAAGCAGCCCAGGGGTAAGTA...GCTGGCTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGCGCGGGATGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp AGATCCCACAGGCATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGTGTGAGCTCACATCCTaGGCTCGTCGACTCCGCCCG +
Preference number: 4 (lower is better)
Translates to: RSHRHGEGPRVLSYVGSWCELTS*ARRLRP
Trigger: CGGGCGGAGTCGACGAGCGCAGGATGTGAGCTCACA...CCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544907.6
CDS-3UTR CCA 90 bp AGACGTCCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCTGCGGCTACGGCTTGTaGCCTCCAACAAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: RRPTFCTRASTAPELPFPCGYGL*PPTRSC
Trigger: ACAACTCCTTGTTGGAGGCCACAAGCCGTAGCCGCA...GGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGGACGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp ACGTCCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGTTCTCAGCAGGAGGTaGGTCAGTCCATATGCCCCA +
Preference number: 4 (lower is better)
Translates to: TSHFLHQGLYSTRTAFPPVLSRR*VSPYAP
Trigger: TGGGGCATATGGACTGACCCACCTCCTGCTGAGAAC...TGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GAACCGCCATCCCAGCCAGCACCAACCAAGAGCATAGATGGTGTGGGCAGGGAGAGGGTCTTGGCACCCTaGAGGGCAAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: EPPSQPAPTKSIDGVGRERVLAP*RAKEML
Trigger: GAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCT...CTCCCTGCCCACACCATCTATGCTCTTGGTTGGTGCTGGCTGGGATGGCGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp CCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGAGGGTCTTGGCACCCTaGAGGGCAAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: PTFCTRASTAPELPFPQLRVLAP*RAKEML
Trigger: GAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCT...CAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp CACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGAGGAGGAACTCACCTCCTaGCTAGTGCTTGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: HFLHQGLYSTRTAFPPAEEELTS*LVLGIS
Trigger: GGAGATGCCAAGCACTAGCCAGGAGGTGAGTTCCTC...CTCAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGCAAAAGGGTTCTGAGGGAGGGTaGTGGTGTCATCTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: EGPRVLSYVGSWHPGGQKGSEGG*WCHLGG
Trigger: ACCTCCGAGATGACACCATCACCCTCCCTCAGAACC...CTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp TTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCCGTCACCAGCCCCTGGATaGGGTAATACTTTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FSAGGGSVHMPQGAEAAPSPAPG*GNTLLQ
Trigger: CTGAAGCAAAGTATTACCTCATCCAGGGGCTGGTGA...CGGAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp GACCCTCTGACCTCTGAGCAGGGCCTGTCATGCCTCTGGGTGCTAGAGCAGAGATGTTTCTGGCCCATGTaGCAGCTCTTTGGCTTTACC +
Preference number: 4 (lower is better)
Translates to: DPLTSEQGLSCLWVLEQRCFWPM*QLFGFT
Trigger: GGTAAAGCCAAAGAGCTGTCACATGGGCCAGAAACA...TCTCTGCTCTAGCACCCAGAGGCATGACAGGCCCTGCTCAGAGGTCAGAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp TCCTGTCATCCCGCGCTCAGAGACACCACTGGGCAGAACCGCCATCCCAGCCAGCATAAAGCCAAAGCCTaGATTTGGCCAAAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SCHPALRDTTGQNRHPSQHKAKA*IWPKKW
Trigger: CCACTTCTTTGGCCAAATTCAGGCTTTGGCTTTATG...CTGGCTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGCGCGGGATGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp GAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGCAAAAGATGTGGTCCCTCCTCTaGCCAGACCCTCTGACCTCT +
Preference number: 4 (lower is better)
Translates to: EGPRVLSYVGSWHPGGQKMWSLL*PDPLTS
Trigger: AGAGGTCAGAGGGTCTGGGCAGAGGAGGGACCACAT...CTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR GCA 90 bp ATAGGACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGGGAAAAATTCTTTCCTaGCCAGGACCTGCGCCATCC +
Preference number: 4 (lower is better)
Translates to: IGQDAVSRSAQGQGRGMWGKILS*PGPAPS
Trigger: GGATGGCGCAGGTCCTGGGCAGGAAAGAATTTTTCC...CCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp GTTTGCTGTCCTCAGCTGATGGGCATGCCAGCCAACACCATGCAGTGCCCACGGTGCTTGGCATCTCCATaGCTGAGTTACCCAACAAGG +
Preference number: 4 (lower is better)
Translates to: VCCPQLMGMPANTMQCPRCLASP*LSYPTR
Trigger: CCTTGTTGGGTAACTCAGCCATGGAGATGCCAAGCA...CCGTGGGCACTGCATGGTGTTGGCTGGCATGCCCATCAGCTGAGGACAGCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GTGATAAAGGAAAAATTCTTTCCTGCCCAGGACCTGCGCCATCCTTTAGGCCGAGGAAAGGGTCACGAGTaGGTGGCCAGTGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VIKEKFFPAQDLRHPLGRGKGHE*VASGGQ
Trigger: CTGGCCTCCACTGGCCACTCACTCGTGACCCTTTCC...TCGGCCTAAAGGATGGCGCAGGTCCTGGGCAGGAAAGAATTTTTCCTTTATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp CTAGGGGAAGGTTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGCAGCCATCAATTCCTTaGTTTCTTGCCGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LGEGSQQEVGQSICPREQQPSIP*FLAGSE
Trigger: CTCAGAACCGGCAAGAAATCAAGGAATTGATGGCTG...CTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAACCTTCCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp ACGTCCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCATGGGCTGCTTGGAGTTaGAAAATGCACACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TSHFLHQGLYSTRTAFPPWAAWS*KMHTAK
Trigger: CTTGGCTGTGTGCATTTTTCAACTCCAAGCAGCCCA...TGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp TGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCACTGACAAGAAAATCTaGCCTTCATCCATACTTTGT +
Preference number: 4 (lower is better)
Translates to: WGGQWGGFHRMGDRASRATDKKI*PSSILC
Trigger: ACAAAGTATGGATGAAGGTCAGATTTTCTTGTCAGT...GGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp GACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGTCCCTATACGTGGCTACGTTaGTTTGTTAGGCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: DRTQSPEVLRGKAGECGPYTWLR*FVRLAE
Trigger: TTCTGCCAGCCTAACAAAGCAACGTAGCCACGTATA...GGGACCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp TGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGAGGCCTAAGATGTTTTTCAGCAGGTaGTCGTCAGAGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CTRASTAPELPFPQLRPKMFFSR*SSELLV
Trigger: CACCAGCAACTCTGACGACCACCTGCTGAAAAACAT...CTTAGGCCTCAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp TGGCTGAGTTACCCAACAAGGAGTGAAGGCCTTCAGGGTGCTTCGGTTGCTCCTTGCGGCTACGGCTTGTaGCCTCCAACAAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: WLSYPTRSEGLQGASVAPCGYGL*PPTRSC
Trigger: ACAACTCCTTGTTGGAGGCCACAAGCCGTAGCCGCA...AGGAGCAACCGAAGCACCCTGAAGGCCTTCACTCCTTGTTGGGTAACTCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp GGTTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCAACCAAGAGCATAGATaGTGTGGGCAGGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: GSQQEVGQSICPREQKQLNQEHR*CGQGVD
Trigger: ATCTACTCCCTGCCCACACCATCTATGCTCTTGGTT...GAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CAA 72 bp ATTTCCCCTGTCCCGCCGTCATGTCACTTCAGGTCCTaGTGTCTAACCCTGGGTCTGGCATTTGCCCATAGG +
Preference number: 4 (lower is better)
Translates to: ISPVPPSCHFRS*CLTLGLAFAHR
Trigger: CCTATGGGCAAATGCCAGACCCAGGGTTAGACACAAGGACCTGAAGTGACATGACGGCGGGACAGGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GAGCAGATAGGACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGACATAGAGTAGGACGTTaGGTGTCTCCTCATAGATTC +
Preference number: 4 (lower is better)
Translates to: EQIGQDAVSRSAQGQGRGHRVGR*VSPHRF
Trigger: GAATCTATGAGGAGACACTCAACGTCCTACTCTATG...TCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTCCTATCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp ATATGCCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATGGTGAGCATCTTGTTACCTCAATaGGGGCTGGAAGAACTAGTA +
Preference number: 4 (lower is better)
Translates to: ICPREQKQLRRAGRVMVSILLPQ*GLEELV
Trigger: TACTAGTTCTTCCAGCCCTCATTGAGGTAACAAGAT...GCTCACCATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp ATATGCCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATGGTGAGCCTTGGAGTTGAAAAATaGACACAGCCAAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: ICPREQKQLRRAGRVMVSLGVEK*TQPRVA
Trigger: AGCAACTCTTGGCTGTGTGCATTTTTCAACTCCAAG...GCTCACCATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CAA 72 bp GCCGTGGCTCATGTTTCTGGCCCATGTGACAGCTCTTaGGCTTTACCGTATGTGAGGACAGCATGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: AVAHVSGPCDSS*ALPYVRTAWLE
Trigger: TTCCAGCCATGCTGTCCTCACATACGGTAAAGCCAAAGAGCTGTCACATGGGCCAGAAACATGAGCCACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp CACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTTAGAATTAGAGCCGCCCCTAGCCTaGAGCCGCCTGCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HPGGQKKCSVSSLLDLELEPPLA*SRLPLS
Trigger: GCTGAGGGGCAGGCGGCTGCAGGCTAGGGGCGGCTC...TAATTCTAAATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR GCA 90 bp ATATGCCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATGGTGAGCGGAGGGCAAAAGAAATaGTCAGTTTCCTCATTACTA +
Preference number: 4 (lower is better)
Translates to: ICPREQKQLRRAGRVMVSGGQKK*SVSSLL
Trigger: TAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCC...GCTCACCATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR GCA 90 bp AATGAAAACCAAAGCCCTAAAGAGGAACTCACCTCCTGGCTAGTGCTTGGCATCGCACCCTGTGAGGACTaGCGGTCCCAGCTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: NENQSPKEELTSWLVLGIAPCED*RSQLSH
Trigger: ATGGCTAAGCTGGGACCGGCAGTCCTCACAGGGTGC...GATGCCAAGCACTAGCCAGGAGGTGAGTTCCTCTTTAGGGCTTTGGTTTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp GCTGGAAGCCAAGGGTACTCAAGAGAATCACAAAGAGCAGTCGTGCTAGACCTAGCTCCACGGTCTTCCTaGCGTGGCTCATGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: AGSQGYSRESQRAVVLDLAPRSS*RGSCFW
Trigger: CCAGAAACATGAGCCACGGCAGGAAGACCGTGGAGC...TAGGTCTAGCACGACTGCTCTTTGTGATTCTCTTGAGTACCCTTGGCTTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp CACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGAGGGTCGTCAGAGTTGCTaGTGTAGGAATACTTGTTGT +
Preference number: 4 (lower is better)
Translates to: HFLHQGLYSTRTAFPPAEGRQSC*CRNTCC
Trigger: ACAACAAGTATTCCTACACCAGCAACTCTGACGACC...CTCAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTCTCCTCATCTTCACTaGGGGAAGCCTGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GSWHPGGQKKCSVSSLLDSPHLH*GKPGCG
Trigger: GCCGCAGCCAGGCTTCCCCCAGTGAAGATGAGGAGA...ATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp AGGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATCTGGTCAGTCGCGATaGGTAGACTGGTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: RVLAPWRAKEMLSFLITRSGQSR*VDWWPS
Trigger: GCTCGGCCACCAGTCTACCCATCGCGACTGACCAGA...TCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GCTGGAAGCCAAGGGTACTCAAGAGAATCACAAAGAGCAGTCGTGCTAGACCTATGCACTCTGAGCTGCTaGCCAGGCTGCAAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AGSQGYSRESQRAVVLDLCTLSC*PGCKAR
Trigger: TCTGGCTTTGCAGCCTGGCCAGCAGCTCAGAGTGCA...TAGGTCTAGCACGACTGCTCTTTGTGATTCTCTTGAGTACCCTTGGCTTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp CCGTCATGTCACTTCAGGTCCTTGTGTCTAACCCTGGGTCTGGCATTTGCCCATGTTGCTTTGTTAGGCTaGCAGAACAGTCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PSCHFRSLCLTLGLAFAHVALLG*QNSPSL
Trigger: CAGGGAGGGACTGTTCTGCCAGCCTAACAAAGCAAC...ATGGGCAAATGCCAGACCCAGGGTTAGACACAAGGACCTGAAGTGACATGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CAA 72 bp GAGCAGAAAGTGGGTACTATACGTGGCTACGTTGCTTaGTTAGGCTGGCAGAACAGTCCCTCCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: EQKVGTIRGYVA*LGWQNSPSLTA
Trigger: TGCTGTCAGGGAGGGACTGTTCTGCCAGCCTAACAAAGCAACGTAGCCACGTATAGTACCCACTTTCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp AGGCAGCAGCAGCATGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGATGAGGTAATACTTTaGTTCAGCCATCAATTCCTT +
Preference number: 4 (lower is better)
Translates to: RQQQHGVANGAGSTGWEIDEVIL*FSHQFL
Trigger: AAGGAATTGATGGCTGAAGCAAAGTATTACCTCATC...TATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCATGCTGCTGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GCTGGAAGCCAAGGGTACTCAAGAGAATCACAAAGAGCAGTCGTGCTAGACCTAACGGTCTTCCTGCCGTaGCTCATGTTTCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: AGSQGYSRESQRAVVLDLTVFLP*LMFLAH
Trigger: ATGGGCCAGAAACATGAGCCACGGCAGGAAGACCGT...TAGGTCTAGCACGACTGCTCTTTGTGATTCTCTTGAGTACCCTTGGCTTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp AGATCCCACAGGCATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGGAGAAAATAGGCCAGTaGTCTCAGGCTGACGCATTC +
Preference number: 4 (lower is better)
Translates to: RSHRHGEGPRVLSYVGSWEKIGQ*SQADAF
Trigger: GAATGCGTCAGCCTGAGACCACTGGCCTATTTTCTC...CCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GAGCAGATAGGACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAAGATTATCAACCTCCTaGATAACAGTACAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: EQIGQDAVSRSAQGQGRGRLSTS*ITVQSA
Trigger: AGCACTTTGTACTGTTATTCAGGAGGTTGATAATCT...TCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTCCTATCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR GCA 90 bp ACGTCCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGGAGGGCAAAAGAAATaGTCAGTTTCCTCATTACTA +
Preference number: 4 (lower is better)
Translates to: TSHFLHQGLYSTRTAFPPGGQKK*SVSSLL
Trigger: TAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCC...TGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGGACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp CCGTCATGTCACTTCAGGTCCTTGTGTCTAACCCTGGGTCTGGCATTTGCCCATCCAAAGAGCAGAAAGTaGGTACTATACGTGGCTACG +
Preference number: 4 (lower is better)
Translates to: PSCHFRSLCLTLGLAFAHPKSRK*VLYVAT
Trigger: CGTAGCCACGTATAGTACCCACTTTCTGCTCTTTGG...ATGGGCAAATGCCAGACCCAGGGTTAGACACAAGGACCTGAAGTGACATGACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp CATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGCCTTTAGGCCGACCTTaGTCACATACCAAATTCAAT +
Preference number: 4 (lower is better)
Translates to: HGEGPRVLSYVGSWHPGGPLGRP*SHTKFN
Trigger: ATTGAATTTGGTATGTGACCAAGGTCGGCCTAAAGG...CCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CAA 72 bp TGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTaGGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: WRRAKGSVICRV*APWRAKEMLSF
Trigger: GAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp CAGAAAGTGGGTACTATACGTGGCTACGTTGCTTTGTTAGGCTGGCAGAACAGTTGGCATCTCCATGGCTaGGTTACCCAACAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: QKVGTIRGYVALLGWQNSWHLHG*VTQQGV
Trigger: CACTCCTTGTTGGGTAACTCAGCCATGGAGATGCCA...ACTGTTCTGCCAGCCTAACAAAGCAACGTAGCCACGTATAGTACCCACTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GCTGGAAGCCAAGGGTACTCAAGAGAATCACAAAGAGCAGTCGTGCTAGACCTAGGAAGAACTAGTAGCTaGTCACCAAGGTACCTGACC +
Preference number: 4 (lower is better)
Translates to: AGSQGYSRESQRAVVLDLGRTSS*SPRYLT
Trigger: GGTCAGGTACCTTGGTGATCAGCTACTAGTTCTTCC...TAGGTCTAGCACGACTGCTCTTTGTGATTCTCTTGAGTACCCTTGGCTTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp TCATATGTAGGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCACTACAAGTCCCTGCATaGATAGCGCTCTATCCGGGA +
Preference number: 4 (lower is better)
Translates to: SYVGSWHPGGQKKCSVSSLQVPA*IALYPG
Trigger: TCCCGGATAGAGCGCTATGCATGCAGGGACTTGTAG...TGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544907.6
CDS-3UTR TCA 90 bp CACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTTAGAATTAGCCGGCTGGGGAGCCTaGGACTACAAGTCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: HPGGQKKCSVSSLLDLELAGWGA*DYKSLH
Trigger: ATGCAGGGACTTGTAGTCTCAGGCTCCCCAGCCGGC...TAATTCTAAATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544907.6
CDS-3UTR GCA 90 bp ACGTCCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAAACTTATCAAGCCTGTaGTTAAACACCTTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: TSHFLHQGLYSTRTAFPPNLSSL*LNTLGK
Trigger: TTTTCCTAAGGTGTTTAAGCACAGGCTTGATAAGTT...TGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGGACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GTCATAAAGCCAAAGCCTGAATTTGGCCAAAGAAGTGGATTTGTCTTTATCTTGTTGAGCATGGTGTCGTaGCGGGTCAGGGCCCGCACA +
Preference number: 4 (lower is better)
Translates to: VIKPKPEFGQRSGFVFILLSMVS*RVRART
Trigger: TGTGCGGGCCCTGACCCGCCACGACACCATGCTCAA...CAAGATAAAGACAAATCCACTTCTTTGGCCAAATTCAGGCTTTGGCTTTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp GGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATATAGATTCGGGCCTCTaGGAATTCCACCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GSWHPGGQKKCSVSSLLDIDSGL*EFHLGL
Trigger: CAGACCAAGGTGGAATTCCCAGAGGCCCGAATCTAT...ATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp AGGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATATGTGAGGACAGCATaGCTGGAAGCCAAGGGTACT +
Preference number: 4 (lower is better)
Translates to: RVLAPWRAKEMLSFLITRYVRTA*LEAKGT
Trigger: AGTACCCTTGGCTTCCAGCCATGCTGTCCTCACATA...TCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp TTAGAAAGTCACATTTCCCCTGTCCCGCCGTCATGTCACTTCAGGTCCTTGTGTATCACAACACCTCAGTaGGGAGCTGGGAATTTGAGT +
Preference number: 4 (lower is better)
Translates to: LESHISPVPPSCHFRSLCITTPQ*GAGNLS
Trigger: ACTCAAATTCCCAGCTCCCCACTGAGGTGTTGTGAT...ACACAAGGACCTGAAGTGACATGACGGCGGGACAGGGGAAATGTGACTTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp CACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTTAGAATTAAAGTGCTGTAGCGCTTaGCGTGGATGCGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: HPGGQKKCSVSSLLDLELKCCSA*RGCGGH
Trigger: GTGTCCGCCGCATCCACGTCAAGCGCTACAGCACTT...TAATTCTAAATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp CACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTTAGAATTATCCCCTCCCTCAGATTaGTTCTGCAGGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: HPGGQKKCSVSSLLDLELSPPSD*FCREVG
Trigger: CCCCACTTCCCTGCAGAATCAATCTGAGGGAGGGGA...TAATTCTAAATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GAAAATCTGACCTTCATCCATACTTTGTTTACTTACCCCTGGGCTGCTTGGAGTAGACCTAGGAGTCAGTaGTGTGACTATGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: ENLTFIHTLFTYPWAAWSRPRSQ*CDYDVG
Trigger: CCCCACATCATAGTCACATCACTGACTCCTAGGTCT...ACTCCAAGCAGCCCAGGGGTAAGTAAACAAAGTATGGATGAAGGTCAGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp GAAAATCTGACCTTCATCCATACTTTGTTTACTTACCCCTGGGCTGCTTGGAGTGATCACCAAGGTACCTaGCCTGAGAGTCTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: ENLTFIHTLFTYPWAAWSDHQGT*PESLSA
Trigger: AGCACTAAGACTCTCAGGTCAGGTACCTTGGTGATC...ACTCCAAGCAGCCCAGGGGTAAGTAAACAAAGTATGGATGAAGGTCAGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp CACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTTAGAATTAGTGGGTCAGTCCATATaGCCCAGGGAGCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: HPGGQKKCSVSSLLDLELVGQSI*PREQKQ
Trigger: CTGCTTCTGCTCCCTGGGGCATATGGACTGACCCAC...TAATTCTAAATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp CCGTCATGTCACTTCAGGTCCTTGTGTCTAACCCTGGGTCTGGCATTTGCCCATAATAAAACCCAATACTaGCCTGTGTTGTTAACAGCA +
Preference number: 4 (lower is better)
Translates to: PSCHFRSLCLTLGLAFAHNKTQY*PVLLTA
Trigger: TGCTGTTAACAACACAGGCCAGTATTGGGTTTTATT...ATGGGCAAATGCCAGACCCAGGGTTAGACACAAGGACCTGAAGTGACATGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp TTAGAAAGTCACATTTCCCCTGTCCCGCCGTCATGTCACTTCAGGTCCTTGTGTTTCCATCACTTATGCTaGGCAACCAAATATTACAGT +
Preference number: 4 (lower is better)
Translates to: LESHISPVPPSCHFRSLCFHHLC*ATKYYS
Trigger: ACTGTAATATTTGGTTGCTCAGCATAAGTGATGGAA...ACACAAGGACCTGAAGTGACATGACGGCGGGACAGGGGAAATGTGACTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp GGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTGATGAGGTAATACTTTaGTTCAGCCATCAATTCCTT +
Preference number: 4 (lower is better)
Translates to: GSVICRVLAPWRAKEMLSDEVIL*FSHQFL
Trigger: AAGGAATTGATGGCTGAAGCAAAGTATTACCTCATC...ACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CCA 90 bp GAAAATCTGACCTTCATCCATACTTTGTTTACTTACCCCTGGGCTGCTTGGAGTGGTCGTCAGAGTTGCTaGTGTAGGAATACTTGTTGT +
Preference number: 4 (lower is better)
Translates to: ENLTFIHTLFTYPWAAWSGRQSC*CRNTCC
Trigger: ACAACAAGTATTCCTACACCAGCAACTCTGACGACC...ACTCCAAGCAGCCCAGGGGTAAGTAAACAAAGTATGGATGAAGGTCAGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
3UTR CAA 72 bp CTTCATCCATACTTTGTTTACTTACCCCTGGGCTGCTaGGAGTTGAAAAATGCACACAGCCAAGAGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LHPYFVYLPLGC*ELKNAHSQELL
Trigger: AAGCAACTCTTGGCTGTGTGCATTTTTCAACTCCAAGCAGCCCAGGGGTAAGTAAACAAAGTATGGATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR GCA 90 bp GGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTAACTTATCAAGCCTGTaGTTAAACACCTTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: GSVICRVLAPWRAKEMLSNLSSL*LNTLGK
Trigger: TTTTCCTAAGGTGTTTAAGCACAGGCTTGATAAGTT...ACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR TCA 90 bp GTCATAAAGCCAAAGCCTGAATTTGGCCAAAGAAGTGGATTTGTCTTTATCTTGCATAGAGTAGGACGTTaGGTGTCTCCTCATAGATTC +
Preference number: 4 (lower is better)
Translates to: VIKPKPEFGQRSGFVFILHRVGR*VSPHRF
Trigger: GAATCTATGAGGAGACACTCAACGTCCTACTCTATG...CAAGATAAAGACAAATCCACTTCTTTGGCCAAATTCAGGCTTTGGCTTTATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CCA 90 bp CACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTTAGAATTAAGTGGGTACTATACGTaGCTACGTTGCTTTGTTAGG +
Preference number: 4 (lower is better)
Translates to: HPGGQKKCSVSSLLDLELSGYYT*LRCFVR
Trigger: CCTAACAAAGCAACGTAGCCACGTATAGTACCCACT...TAATTCTAAATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR TCA 90 bp CACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTTAGAATTAAGATTATCAACCTCCTaGATAACAGTACAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: HPGGQKKCSVSSLLDLELRLSTS*ITVQSA
Trigger: AGCACTTTGTACTGTTATTCAGGAGGTTGATAATCT...TAATTCTAAATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS GCA 90 bp GCAGCCGCCTGCCCCTCAGCAGTCCCAAGCTGTGAGCTCACATCCTaGGCTCGTCGACTCCGCCCGGAGTGCTGCCCAGCCCAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: AAACPSAVPSCELTS*ARRLRPECCPAQPA
Trigger: AGCCGGCTGGGCTGGGCAGCACTCCGGGCGGAGTCGACGAGCGCAGGATGTGAGCTCACAGCTTGGGACTGCTGAGGGGCAGGCGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544907.6
CDS TCA 90 bp GGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCCTGACTCCCTaGGGGTCTGGTCAGTCGCGATGGGTAGACTGGTGGCCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GFHRMGDRASRALTP*GSGQSRWVDWWPSC
Trigger: GCAGCTCGGCCACCAGTCTACCCATCGCGACTGACCAGACCCTCAGGGAGTCAGGGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS CCA 90 bp TGGAAGGCTCCGCCGTGGTGGAAAGGGTCACGAGTGAGTGGCCAGTaGAGGCCAGAGCCTCATAATCTCAGTGCGTCCCCGGGGGCGCCT +
Preference number: 5 (lower is better)
Translates to: WKAPPWWKGSRVSGQ*RPEPHNLSASPGAP
Trigger: AGGCGCCCCCGGGGACGCACTGAGATTATGAGGCTCTGGCCTCCACTGGCCACTCACTCGTGACCCTTTCCACCACGGCGGAGCCTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp GACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGTCCCCCACTGAGCTTGGGCTaGGCCCCTGAGGCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: DRTQSPEVLRGKAGECGPPLSLG*APEAGH
Trigger: GTGCCCAGCCTCAGGGGCCAAGCCCAAGCTCAGTGG...GGGACCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp GGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCCTGACTGGCTGCGGCTACGGCTaGTGGCCTCCAACAAGGAGT +
Preference number: 5 (lower is better)
Translates to: GQWGGFHRMGDRASRALTGCGYG*WPPTRS
Trigger: ACTCCTTGTTGGAGGCCACAAGCCGTAGCCGCAGCC...AGTCAGGGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CAA 90 bp CACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGAGCGGCAGGAGGTAGGCTaGGAAGGCTCCGCCGTGGTG +
Preference number: 5 (lower is better)
Translates to: HFLHQGLYSTRTAFPPAERQEVG*EGSAVV
Trigger: CACCACGGCGGAGCCTTCCAAGCCTACCTCCTGCCG...CTCAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp GTTTGCTGTCCTCAGCTGATGGGCATGCCAGCCAACACCATGCAGTGCCCACGGGCCTCCAACAAGGAGTaGTCGGGGACGCGGGGAGTC +
Preference number: 5 (lower is better)
Translates to: VCCPQLMGMPANTMQCPRASNKE*SGTRGV
Trigger: GACTCCCCGCGTCCCCGACAACTCCTTGTTGGAGGC...CCGTGGGCACTGCATGGTGTTGGCTGGCATGCCCATCAGCTGAGGACAGCAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS TCA 90 bp GGAGGTAGGCTTGGAAGGCTCCGCCGTGGTGGAAAGGGTCACGAGTaGGTGGCCAGTGGAGGCCAGAGCCTCATAATCTCAGTGCGTCCC +
Preference number: 5 (lower is better)
Translates to: GGRLGRLRRGGKGHE*VASGGQSLIISVRP
Trigger: GGGACGCACTGAGATTATGAGGCTCTGGCCTCCACTGGCCACTCACTCGTGACCCTTTCCACCACGGCGGAGCCTTCCAAGCCTACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS CCA 90 bp CGGTCCCGCAGTTCAAAGGTCTCCTCATCTTCACTGGGGGAAGCCTaGCTGCGGCTACGGCTTGTGGCCTCCAACAAGGAGTTGTCGGGG +
Preference number: 5 (lower is better)
Translates to: RSRSSKVSSSSLGEA*LRLRLVASNKELSG
Trigger: CCCCGACAACTCCTTGTTGGAGGCCACAAGCCGTAGCCGCAGCCAGGCTTCCCCCAGTGAAGATGAGGAGACCTTTGAACTGCGGGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CAA 90 bp TGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCTCTGGGAATTCCACCTaGGTCTGCTTCTTCTCCGTG +
Preference number: 5 (lower is better)
Translates to: WGGQWGGFHRMGDRASRASGNST*VCFFSV
Trigger: CACGGAGAAGAAGCAGACCAAGGTGGAATTCCCAGA...GGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CAA 90 bp CCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCTGGGCTGCGGCTACGGCTaGTGGCCTCCAACAAGGAGT +
Preference number: 5 (lower is better)
Translates to: PTFCTRASTAPELPFPQLGCGYG*WPPTRS
Trigger: ACTCCTTGTTGGAGGCCACAAGCCGTAGCCGCAGCC...CAGCTGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS CCA 90 bp TGGAAGGCTCCGCCGTGGTGGAAAGGGTCACGAGTGAGTGGCCAGTaGAGGCCAGAGCCTCATAATCTCAGTGATCCTGCGCTCGTCGAC +
Preference number: 5 (lower is better)
Translates to: WKAPPWWKGSRVSGQ*RPEPHNLSDPALVD
Trigger: GTCGACGAGCGCAGGATCACTGAGATTATGAGGCTCTGGCCTCCACTGGCCACTCACTCGTGACCCTTTCCACCACGGCGGAGCCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578158.5
CDS-3UTR CAA 90 bp GGGCCTGTCATGCCTCTGGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCATGGAGCTGGACATACTTGTaGCCCAACCCTCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: GPVMPLGARAETQAAAAWSWTYL*PNPPPL
Trigger: CAAGGGAGGAGGGTTGGGCAACAAGTATGTCCAGCT...CCATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGACAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp TCCTGTCATCCCGCGCTCAGAGACACCACTGGGCAGAACCGCCATCCCAGCCAGTTGAGCTGGACATACTaGTTGCCCAACCCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SCHPALRDTTGQNRHPSQLSWTY*LPNPPP
Trigger: GGGAGGAGGGTTGGGCAACAAGTATGTCCAGCTCAA...CTGGCTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGCGCGGGATGACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp GGGCCTGTCATGCCTCTGGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCATGGAGGATCCAGCCTTCTTaGTCGGTCAGCACCTCCATG +
Preference number: 5 (lower is better)
Translates to: GPVMPLGARAETQAAAAWRIQPS*SVSTSM
Trigger: CATGGAGGTGCTGACCGACAAAGAAGGCTGGATCCT...CCATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGACAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp AGGCAGCAGCAGCATGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGGAGATAAGCTTCACCACGGGCTaGGTGGAGGATTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: RQQQHGVANGAGSTGWEISFTTG*VEDSMS
Trigger: GCTCATCGAATCCTCCACCAAGCCCGTGGTGAAGCT...TATCTCCCATCCTGTGGAACCCGCCCCATTGGCCACCCCATGCTGCTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS TCA 90 bp GGAGGTAGGCTTGGAAGGCTCCGCCGTGGTGGAAAGGGTCACGAGTaGGTGGCCAGTGGAGGCCAGAGCCTCATAATCTCAGTGATCCTG +
Preference number: 5 (lower is better)
Translates to: GGRLGRLRRGGKGHE*VASGGQSLIISVIL
Trigger: CAGGATCACTGAGATTATGAGGCTCTGGCCTCCACTGGCCACTCACTCGTGACCCTTTCCACCACGGCGGAGCCTTCCAAGCCTACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578158.5
CDS CCA 90 bp GAGACTACAAGTCCCTGCATGCATAGCGCTCTATCCGGGAAAGGGTaGAGGCGGAATCCCCCGAGGGTCTTCGCGGAGAGAGCAGAGCTA +
Preference number: 5 (lower is better)
Translates to: ETTSPCMHSALSGKG*RRNPPRVFAERAEL
Trigger: TAGCTCTGCTCTCTCCGCGAAGACCCTCGGGGGATTCCGCCTCCACCCTTTCCCGGATAGAGCGCTATGCATGCAGGGACTTGTAGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544907.6
CDS-3UTR CAA 90 bp TCCTGTCATCCCGCGCTCAGAGACACCACTGGGCAGAACCGCCATCCCAGCCAGGTCATATGTAGGGTCTaGGCACCCTGGAGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: SCHPALRDTTGQNRHPSQVICRV*APWRAK
Trigger: TTTTGCCCTCCAGGGTGCCAAGACCCTACATATGAC...CTGGCTGGGATGGCGGTTCTGCCCAGTGGTGTCTCTGAGCGCGGGATGACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS TCA 90 bp GGAGGTAGGCTTGGAAGGCTCCGCCGTGGTGGAAAGGGTCACGAGTaGGTGGCCAGTGGAGGCCAGAGCCTCATAATCTCAGTGATGTTC +
Preference number: 5 (lower is better)
Translates to: GGRLGRLRRGGKGHE*VASGGQSLIISVMF
Trigger: GAACATCACTGAGATTATGAGGCTCTGGCCTCCACTGGCCACTCACTCGTGACCCTTTCCACCACGGCGGAGCCTTCCAAGCCTACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582302.2
CDS-3UTR CAA 90 bp GGTTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCAGAGAGCCGCCCACGTaGAGCTGGACATACTTGTTG +
Preference number: 5 (lower is better)
Translates to: GSQQEVGQSICPREQKQLREPPT*SWTYLL
Trigger: CAACAAGTATGTCCAGCTCAACGTGGGCGGCTCTCT...GAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp TTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCCGTCACCAATGACATCCTaGATGAAGAGCACGCGGCCG +
Preference number: 5 (lower is better)
Translates to: FSAGGGSVHMPQGAEAAPSPMTS*MKSTRP
Trigger: CGGCCGCGTGCTCTTCATCAAGGATGTCATTGGTGA...CGGAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CAA 90 bp ATATGCCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATGGTGAGCTCTGGGAATTCCACCTaGGTCTGCTTCTTCTCCGTG +
Preference number: 5 (lower is better)
Translates to: ICPREQKQLRRAGRVMVSSGNST*VCFFSV
Trigger: CACGGAGAAGAAGCAGACCAAGGTGGAATTCCCAGA...GCTCACCATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CAA 90 bp ATATGCCCCAGGGAGCAGAAGCAGCTCCGTCGGGCAGGAAGGGTGATGGTGAGCGTCATATGTAGGGTCTaGGCACCCTGGAGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: ICPREQKQLRRAGRVMVSVICRV*APWRAK
Trigger: TTTTGCCCTCCAGGGTGCCAAGACCCTACATATGAC...GCTCACCATCACCCTTCCTGCCCGACGGAGCTGCTTCTGCTCCCTGGGGCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CAA 90 bp GGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCCTGACTTGGGGAGCTGGGAATTaGAGTGTTAAAGGACCTCAA +
Preference number: 5 (lower is better)
Translates to: GQWGGFHRMGDRASRALTWGAGN*SVKGPQ
Trigger: TTGAGGTCCTTTAACACTCAAATTCCCAGCTCCCCA...AGTCAGGGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp ATAGGACAGGACGCAGTCTCCAGAAGTGCTCAGGGGCAAGGCAGGGGAATGTGGTCACCAATGACATCCTaGATGAAGAGCACGCGGCCG +
Preference number: 5 (lower is better)
Translates to: IGQDAVSRSAQGQGRGMWSPMTS*MKSTRP
Trigger: CGGCCGCGTGCTCTTCATCAAGGATGTCATTGGTGA...CCACATTCCCCTGCCTTGCCCCTGAGCACTTCTGGAGACTGCGTCCTGTCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CAA 90 bp AGACCCAGGCAGCAGCAGCATGGGGTGGCCAATGGGGCGGGTTCCACAGGATGGTCCTTTAGGCCGACCTaGGTCACATACCAAATTCAA +
Preference number: 5 (lower is better)
Translates to: RPRQQQHGVANGAGSTGWSFRPT*VTYQIQ
Trigger: TTGAATTTGGTATGTGACCAAGGTCGGCCTAAAGGA...CCATCCTGTGGAACCCGCCCCATTGGCCACCCCATGCTGCTGCTGCCTGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS CCA 90 bp TGGAAGGCTCCGCCGTGGTGGAAAGGGTCACGAGTGAGTGGCCAGTaGAGGCCAGAGCCTCATAATCTCAGTGATGTTCTGCCAATGCAA +
Preference number: 5 (lower is better)
Translates to: WKAPPWWKGSRVSGQ*RPEPHNLSDVLPMQ
Trigger: TTGCATTGGCAGAACATCACTGAGATTATGAGGCTCTGGCCTCCACTGGCCACTCACTCGTGACCCTTTCCACCACGGCGGAGCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582302.2
CDS-3UTR CAA 90 bp AGATCCCACAGGCATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGTTCAGGGTGCTTCGGTaGCTCCTGTCATCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: RSHRHGEGPRVLSYVGSWFRVLR*LLSSRA
Trigger: AGCGCGGGATGACAGGAGCAACCGAAGCACCCTGAA...CCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp GGCCAATGGGGCGGGTTCCACAGGATGGGAGATAGGGCCTCCCGTGCCCTGACTAAGCTGAATTCTGGTTaGGCCAAGCCAAACAAAAAG +
Preference number: 5 (lower is better)
Translates to: GQWGGFHRMGDRASRALTKLNSG*AKPNKK
Trigger: CTTTTTGTTTGGCTTGGCCAAACCAGAATTCAGCTT...AGTCAGGGCACGGGAGGCCCTATCTCCCATCCTGTGGAACCCGCCCCATTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp TCATGCCTCTGGGTGCTAGAGCAGAGACCCAGGCAGCAGCAGCATGGGGTGGCCAGCCAAAGCCTGAATTaGGCCAAAGAAGTGGATTTG +
Preference number: 5 (lower is better)
Translates to: SCLWVLEQRPRQQQHGVASQSLN*AKEVDL
Trigger: CAAATCCACTTCTTTGGCCAAATTCAGGCTTTGGCT...GGCCACCCCATGCTGCTGCTGCCTGGGTCTCTGCTCTAGCACCCAGAGGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp GGTTCTCAGCAGGAGGTGGGTCAGTCCATATGCCCCAGGGAGCAGAAGCAGCTCCTGGGCTGCTTGGAGTaGAAAAATGCACACAGCCAA +
Preference number: 5 (lower is better)
Translates to: GSQQEVGQSICPREQKQLLGCLE*KNAHSQ
Trigger: TTGGCTGTGTGCATTTTTCAACTCCAAGCAGCCCAG...GAGCTGCTTCTGCTCCCTGGGGCATATGGACTGACCCACCTCCTGCTGAGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp GGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGCAAAAGAAATGCTCAGTCCCAACCCTCCTCCCTaGAAGCCACTGAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GSVICRVLAPWRAKEMLSPNPPP*KPLSLG
Trigger: GCCCAAGCTCAGTGGCTTCAAGGGAGGAGGGTTGGG...ACTGAGCATTTCTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp ACGTCCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCACAATTCCTTGATTTCTaGCCGGTTCTGAGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: TSHFLHQGLYSTRTAFPPQFLDF*PVLREG
Trigger: ACCCTCCCTCAGAACCGGCAAGAAATCAAGGAATTG...TGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CAA 90 bp GAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGCACCCTGGAGGGCAAAAGTGTCACTTCAGGTCCTaGTGTCTAACCCTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: EGPRVLSYVGSWHPGGQKCHFRS*CLTLGL
Trigger: CAGACCCAGGGTTAGACACAAGGACCTGAAGTGACA...CTTTTGCCCTCCAGGGTGCCAAGACCCTACATATGACAGAACCCTTGGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp AGATCCCACAGGCATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGCAATTCCTTGATTTCTaGCCGGTTCTGAGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: RSHRHGEGPRVLSYVGSWQFLDF*PVLREG
Trigger: ACCCTCCCTCAGAACCGGCAAGAAATCAAGGAATTG...CCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CAA 90 bp GTGATAAAGGAAAAATTCTTTCCTGCCCAGGACCTGCGCCATCCTTTAGGCCGAATCCCCTCCCTCAGATaGATTCTGCAGGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: VIKEKFFPAQDLRHPLGRIPSLR*ILQGSG
Trigger: CCCACTTCCCTGCAGAATCAATCTGAGGGAGGGGAT...TCGGCCTAAAGGATGGCGCAGGTCCTGGGCAGGAAAGAATTTTTCCTTTATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp CCGTCATGTCACTTCAGGTCCTTGTGTCTAACCCTGGGTCTGGCATTTGCCCATCCATGTGACAGCTCTTaGGCTTTACCGTATGTGAGG +
Preference number: 5 (lower is better)
Translates to: PSCHFRSLCLTLGLAFAHPCDSS*ALPYVR
Trigger: CCTCACATACGGTAAAGCCAAAGAGCTGTCACATGG...ATGGGCAAATGCCAGACCCAGGGTTAGACACAAGGACCTGAAGTGACATGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp AGATCCCACAGGCATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGTTACCCCTGGGCTGCTaGGAGTTGAAAAATGCACAC +
Preference number: 5 (lower is better)
Translates to: RSHRHGEGPRVLSYVGSWLPLGC*ELKNAH
Trigger: GTGTGCATTTTTCAACTCCAAGCAGCCCAGGGGTAA...CCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp GCTGGAAGCCAAGGGTACTCAAGAGAATCACAAAGAGCAGTCGTGCTAGACCTACGTGGCTACGTTGCTTaGTTAGGCTGGCAGAACAGT +
Preference number: 5 (lower is better)
Translates to: AGSQGYSRESQRAVVLDLRGYVA*LGWQNS
Trigger: ACTGTTCTGCCAGCCTAACAAAGCAACGTAGCCACG...TAGGTCTAGCACGACTGCTCTTTGTGATTCTCTTGAGTACCCTTGGCTTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp ACGTCCCACTTTCTGCACCAGGGCCTCTACAGCACCAGAACTGCCTTTCCCCCAGCCAAAGAAGTGGATTaGTCTTTATCTTGTTACCTC +
Preference number: 5 (lower is better)
Translates to: TSHFLHQGLYSTRTAFPPAKEVD*SLSCYL
Trigger: GAGGTAACAAGATAAAGACAAATCCACTTCTTTGGC...TGGGGGAAAGGCAGTTCTGGTGCTGTAGAGGCCCTGGTGCAGAAAGTGGGACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS GCA 90 bp GGCACTCTGGCACATATTCACCAGCCCCTGGATGAGGTAATACTTTaGTTCAGCCATCAATTCCTTGATTTCTTGCCGGTTCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GTLAHIHQPLDEVIL*FSHQFLDFLPVLRE
Trigger: CTCCCTCAGAACCGGCAAGAAATCAAGGAATTGATGGCTGAAGCAAAGTATTACCTCATCCAGGGGCTGGTGAATATGTGCCAGAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226225.7
ENST00000544907.6
ENST00000582302.2
CDS-3UTR CAA 90 bp CACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTTAGAATTAGCCTCCAACAAGGAGTaGTCGGGGACGCGGGGAGTC +
Preference number: 5 (lower is better)
Translates to: HPGGQKKCSVSSLLDLELASNKE*SGTRGV
Trigger: GACTCCCCGCGTCCCCGACAACTCCTTGTTGGAGGC...TAATTCTAAATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CAA 90 bp AGATCCCACAGGCATGGAGAAGGGCCAAGGGTTCTGTCATATGTAGGGTCTTGGACCTTCATCCATACTTaGTTTACTTACCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RSHRHGEGPRVLSYVGSWTFIHT*FTYPWA
Trigger: AGCCCAGGGGTAAGTAAACAAAGTATGGATGAAGGT...CCAAGACCCTACATATGACAGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp CACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTTAGAATTACCCTGGGTCTGGCATTaGCCCATAGGCTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: HPGGQKKCSVSSLLDLELPWVWH*PIGSVA
Trigger: TGCCACAGAGCCTATGGGCAAATGCCAGACCCAGGG...TAATTCTAAATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS-3UTR CAA 90 bp CACCCTGGAGGGCAAAAGAAATGCTCAGTTTCCTCATTACTAGATTTAGAATTAAGCTTCACCACGGGCTaGGTGGAGGATTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: HPGGQKKCSVSSLLDLELSFTTG*VEDSMS
Trigger: GCTCATCGAATCCTCCACCAAGCCCGTGGTGAAGCT...TAATTCTAAATCTAGTAATGAGGAAACTGAGCATTTCTTTTGCCCTCCAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS-3UTR CAA 90 bp GTCATAAAGCCAAAGCCTGAATTTGGCCAAAGAAGTGGATTTGTCTTTATCTTGTCAAGAGAGATGAACTaGATAACCTGTGTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: VIKPKPEFGQRSGFVFILSREMN*ITCVLS
Trigger: GGAGAGAACACAGGTTATCAAGTTCATCTCTCTTGA...CAAGATAAAGACAAATCCACTTCTTTGGCCAAATTCAGGCTTTGGCTTTATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226225.7
CDS GCA 72 bp TGCCCCTCAGCAGTCCCAAGCTGTGAGCTCACATCCTaGGCTCGTCGACTCCGCCCGGAGTGCTGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: CPSAVPSCELTS*ARRLRPECCPA
Trigger: GGCTGGGCAGCACTCCGGGCGGAGTCGACGAGCGCAGGATGTGAGCTCACAGCTTGGGACTGCTGAGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544907.6
CDS TCA 72 bp GGCCGAGCTGCCGGTCATCGTAAGTGCTGTAGCGCTTaGCGTGGATGCGGCGGACACGGTCCCGCAGTTCAA +
Preference number: 6 (lower is better)
Translates to: GRAAGHRKCCSA*RGCGGHGPAVQ
Trigger: TTGAACTGCGGGACCGTGTCCGCCGCATCCACGTCAAGCGCTACAGCACTTACGATGACCGGCAGCTCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS TCA 72 bp AGGATGGGAGATAGGGCCTCCCGTGCCCTGACTCCCTaGGGGTCTGGTCAGTCGCGATGGGTAGACTGGTGG +
Preference number: 6 (lower is better)
Translates to: RMGDRASRALTP*GSGQSRWVDWW
Trigger: CCACCAGTCTACCCATCGCGACTGACCAGACCCTCAGGGAGTCAGGGCACGGGAGGCCCTATCTCCCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS GCA 72 bp GCCCAGCCGGCTGGGGAGCCTGAGACTACAAGTCCCTaGATGCATAGCGCTCTATCCGGGAAAGGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: AQPAGEPETTSP*MHSALSGKGWR
Trigger: CCTCCACCCTTTCCCGGATAGAGCGCTATGCATGCAGGGACTTGTAGTCTCAGGCTCCCCAGCCGGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544907.6
CDS CCA 72 bp AGTCCCTGCATGCATAGCGCTCTATCCGGGAAAGGGTaGAGGCGGAATCCCCCGAGGGTCTTCGCGGAGAGA +
Preference number: 6 (lower is better)
Translates to: SPCMHSALSGKG*RRNPPRVFAER
Trigger: TCTCTCCGCGAAGACCCTCGGGGGATTCCGCCTCCACCCTTTCCCGGATAGAGCGCTATGCATGCAGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544907.6
CDS TCA 72 bp CTTGGAAGGCTCCGCCGTGGTGGAAAGGGTCACGAGTaGGTGGCCAGTGGAGGCCAGAGCCTCATAATCTCA +
Preference number: 6 (lower is better)
Translates to: LGRLRRGGKGHE*VASGGQSLIIS
Trigger: TGAGATTATGAGGCTCTGGCCTCCACTGGCCACTCACTCGTGACCCTTTCCACCACGGCGGAGCCTTCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226225.7
ENST00000578158.5
ENST00000582302.2
CDS CCA 72 bp AGTTCAAAGGTCTCCTCATCTTCACTGGGGGAAGCCTaGCTGCGGCTACGGCTTGTGGCCTCCAACAAGGAG +
Preference number: 6 (lower is better)
Translates to: SSKVSSSSLGEA*LRLRLVASNKE
Trigger: CTCCTTGTTGGAGGCCACAAGCCGTAGCCGCAGCCAGGCTTCCCCCAGTGAAGATGAGGAGACCTTTGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226225.7
ENST00000544907.6
CDS CAA 90 bp CTGGATGAGGTAATACTTTGCTTCAGCCATCAATTCCTTGATTTCTaGCCGGTTCTGAGGGAGGGTGATGGTGTCATCTCGGAGGTAATT +
Preference number: 6 (lower is better)
Translates to: LDEVILCFSHQFLDF*PVLREGDGVISEVI
Trigger: AATTACCTCCGAGATGACACCATCACCCTCCCTCAGAACCGGCAAGAAATCAAGGAATTGATGGCTGAAGCAAAGTATTACCTCATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226225.7
ENST00000544907.6
ENST00000582302.2
CDS CAA 72 bp GTAATACTTTGCTTCAGCCATCAATTCCTTGATTTCTaGCCGGTTCTGAGGGAGGGTGATGGTGTCATCTCG +
Preference number: 6 (lower is better)
Translates to: VILCFSHQFLDF*PVLREGDGVIS
Trigger: CGAGATGACACCATCACCCTCCCTCAGAACCGGCAAGAAATCAAGGAATTGATGGCTGAAGCAAAGTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226225.7
ENST00000544907.6
ENST00000582302.2
CDS GCA 72 bp GCACATATTCACCAGCCCCTGGATGAGGTAATACTTTaGTTCAGCCATCAATTCCTTGATTTCTTGCCGGTT +
Preference number: 6 (lower is better)
Translates to: AHIHQPLDEVIL*FSHQFLDFLPV
Trigger: AACCGGCAAGAAATCAAGGAATTGATGGCTGAAGCAAAGTATTACCTCATCCAGGGGCTGGTGAATATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226225.7
ENST00000544907.6
ENST00000582302.2