RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TNF (Homo sapiens)

Ensembl gene IDs: ENSG00000204490

Ensembl transcript IDs: ENST00000376122.3, ENST00000383496.4, ENST00000412275.2, ENST00000420425.2, ENST00000443707.2, ENST00000445232.2, ENST00000448781.2, ENST00000449264.3

Found 466 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAAGTGCAAACATAAATAGAGGGAGCTGGCTCCATGGGGAGGGCTaGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGA +
Preference number: 1 (lower is better)
Translates to: TSANINRGSWLHGEG*APCLKEVWKHLERG
Trigger: TCCTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCATGGAGCCAGCTCCCTCTATTTATGTTTGCACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR GCA 90 bp TGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGTaGAGGCCACACATTCCTGAATCCCAGGTTTCGAAGTGGTGGTCT +
Preference number: 1 (lower is better)
Translates to: WRPQFEFLVVASTSL*RPHIPESQVSKWWS
Trigger: AGACCACCACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTGCACAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR TCA 90 bp ATTCTTAGTGGTTGCCAGCACTTCACTGTGCAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTGGTGGTCTTGTTGCTTAAAGTTCTA +
Preference number: 1 (lower is better)
Translates to: ILSGCQHFTVQATHS*IPGFEVVVLLLKVL
Trigger: TAGAACTTTAAGCAACAAGACCACCACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTGCACAGTGAAGTGCTGGCAACCACTAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR TCA 90 bp GATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTaGCAGTTGGTCACCAAATCAGCATTGTTTAGACAACTTAATCAG +
Preference number: 1 (lower is better)
Translates to: DYRHNSPGEQRLSNE*QLVTKSALFRQLNQ
Trigger: CTGATTAAGTTGTCTAAACAATGCTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTAGGGAGCTGGCTCCATaGGGAGGGCTGGGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSRELAP*GGLGSV
Trigger: CACGGAGCCCAGCCCTCCCCATGGAGCCAGCTCCCT...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGAGGGAGCTGGCTCCATaGGGAGGGCTGGGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQRELAP*GGLGSV
Trigger: CACGGAGCCCAGCCCTCCCCATGGAGCCAGCTCCCT...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGAGCTGTAGGCCCCAGTaGGTTCTGGAGGCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: MGRAGLRVSRKSGNIWRESCRPQ*VLEAPV
Trigger: AACTGGGGCCTCCAGAACTCACTGGGGCCTACAGCT...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCAGCTGTAGGCCCCAGTaGGTTCTGGAGGCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGSCRPQ*VLEAPV
Trigger: AACTGGGGCCTCCAGAACTCACTGGGGCCTACAGCT...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGAGCTGTAGGCCCCAGTaGGTTCTGGAGGCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQSCRPQ*VLEAPV
Trigger: AACTGGGGCCTCCAGAACTCACTGGGGCCTACAGCT...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTAGCTGTAGGCCCCAGTaGGTTCTGGAGGCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSSCRPQ*VLEAPV
Trigger: AACTGGGGCCTCCAGAACTCACTGGGGCCTACAGCT...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGGCAGGGGAGGCGTTTaGGAAGGTTGGATGTTCGTC +
Preference number: 2 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGGRGGV*EGWMFV
Trigger: GACGAACATCCAACCTTCCCAAACGCCTCCCCTGCC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCTCCATGGGGAGGGCTaGGCTCCGTGTCTCAAGGAA +
Preference number: 2 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQLHGEG*APCLKE
Trigger: TTCCTTGAGACACGGAGCCCAGCCCTCCCCATGGAG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACAGCTGTAGGCCCCAGTaGGTTCTGGAGGCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYSCRPQ*VLEAPV
Trigger: AACTGGGGCCTCCAGAACTCACTGGGGCCTACAGCT...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGGCAGGGGAGGCGTTTaGGAAGGTTGGATGTTCGTC +
Preference number: 2 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQGRGGV*EGWMFV
Trigger: GACGAACATCCAACCTTCCCAAACGCCTCCCCTGCC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGGCCCCAGTGAGTTCTaGAGGCCCCAGTTTGAATTC +
Preference number: 2 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGGPSEF*RPQFEF
Trigger: GAATTCAAACTGGGGCCTCCAGAACTCACTGGGGCC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGGAGCTGGCTCCATaGGGAGGGCTGGGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLRELAP*GGLGSV
Trigger: CACGGAGCCCAGCCCTCCCCATGGAGCCAGCTCCCT...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGGCCAGGGGGCTACATaGGAACAGCCTATTGTTCAG +
Preference number: 2 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGGQGAT*EQPIVQ
Trigger: CTGAACAATAGGCTGTTCCCATGTAGCCCCCTGGCC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCCTGGAGGCCCCAGTTTaGATTCTTAGTGGTTGCCAG +
Preference number: 2 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGLEAPV*ILSGCQ
Trigger: CTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAG...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCCACGGAAAACATGTCTaGGCCAAGGCAGCTCCTACA +
Preference number: 2 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGHGKHV*AKAAPT
Trigger: TGTAGGAGCTGCCTTGGCTCAGACATGTTTTCCGTG...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR GCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGCCAGCACTTCACTGTaGAGGCCACACATTCCTGAA +
Preference number: 2 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREASTSL*RPHIPE
Trigger: TTCAGGAATGTGTGGCCTGCACAGTGAAGTGCTGGC...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGGCAGGGGAGGCGTTTaGGAAGGTTGGATGTTCGTC +
Preference number: 2 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYGRGGV*EGWMFV
Trigger: GACGAACATCCAACCTTCCCAAACGCCTCCCCTGCC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTATAAATAGAGGGAGCTaGCTCCATGGGGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSINRGS*LHGEGW
Trigger: CCAGCCCTCCCCATGGAGCCAGCTCCCTCTATTTAT...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGATAAATAGAGGGAGCTaGCTCCATGGGGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQINRGS*LHGEGW
Trigger: CCAGCCCTCCCCATGGAGCCAGCTCCCTCTATTTAT...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGGCCAGGGGGCTACATaGGAACAGCCTATTGTTCAG +
Preference number: 2 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQGQGAT*EQPIVQ
Trigger: CTGAACAATAGGCTGTTCCCATGTAGCCCCCTGGCC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGGCCAGGGGGCTACATaGGAACAGCCTATTGTTCAG +
Preference number: 2 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSGQGAT*EQPIVQ
Trigger: CTGAACAATAGGCTGTTCCCATGTAGCCCCCTGGCC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCACGGAAAACATGTCTaGGCCAAGGCAGCTCCTACA +
Preference number: 2 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQHGKHV*AKAAPT
Trigger: TGTAGGAGCTGCCTTGGCTCAGACATGTTTTCCGTG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGGCAGGGGAGGCGTTTaGGAAGGTTGGATGTTCGTC +
Preference number: 2 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPGRGGV*EGWMFV
Trigger: GACGAACATCCAACCTTCCCAAACGCCTCCCCTGCC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGGCCCCAGTGAGTTCTaGAGGCCCCAGTTTGAATTC +
Preference number: 2 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYGPSEF*RPQFEF
Trigger: GAATTCAAACTGGGGCCTCCAGAACTCACTGGGGCC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTG +
Preference number: 2 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYQATHS*IPGFEV
Trigger: CACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGTGTCAATTTCTAGGTaGGGTCTTCTCAAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREVSISR*GLLKSC
Trigger: GCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR GCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGCCAGCACTTCACTGTaGAGGCCACACATTCCTGAA +
Preference number: 2 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYASTSL*RPHIPE
Trigger: TTCAGGAATGTGTGGCCTGCACAGTGAAGTGCTGGC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGAACCAAAGGCTCCCTaGTCTCCAGATTCCAGATGT +
Preference number: 2 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSEPKAP*SPDSRC
Trigger: ACATCTGGAATCTGGAGACCAGGGAGCCTTTGGTTC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGCTCCATGGGGAGGGCTaGGCTCCGTGTCTCAAGGAA +
Preference number: 2 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLLHGEG*APCLKE
Trigger: TTCCTTGAGACACGGAGCCCAGCCCTCCCCATGGAG...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGCAGCTCCTACATTaGGTCCCCCAGGATACCCCG +
Preference number: 2 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLRQLLH*VPQDTP
Trigger: CGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCT...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGAGCTGTAGGCCCCAGTaGGTTCTGGAGGCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: LHGNSLLFSSVFTENMSESCRPQ*VLEAPV
Trigger: AACTGGGGCCTCCAGAACTCACTGGGGCCTACAGCT...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGCTCCATGGGGAGGGCTaGGCTCCGTGTCTCAAGGAA +
Preference number: 2 (lower is better)
Translates to: LHGNSLLFSSVFTENMSELHGEG*APCLKE
Trigger: TTCCTTGAGACACGGAGCCCAGCCCTCCCCATGGAG...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGAGGCAGCTCCTACATTaGGTCCCCCAGGATACCCCG +
Preference number: 2 (lower is better)
Translates to: LHGNSLLFSSVFTENMSERQLLH*VPQDTP
Trigger: CGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCT...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGCAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTG +
Preference number: 2 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLQATHS*IPGFEV
Trigger: CACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTG...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGGCAGGGGAGGCGTTTaGGAAGGTTGGATGTTCGTC +
Preference number: 2 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEGRGGV*EGWMFV
Trigger: GACGAACATCCAACCTTCCCAAACGCCTCCCCTGCC...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTCCCAGGTTTCGAAGTaGTGGTCTTGTTGCTTAAAG +
Preference number: 2 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSSQVSK*WSCCLK
Trigger: CTTTAAGCAACAAGACCACCACTTCGAAACCTGGGA...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGTCCCAGGTTTCGAAGTaGTGGTCTTGTTGCTTAAAG +
Preference number: 2 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQSQVSK*WSCCLK
Trigger: CTTTAAGCAACAAGACCACCACTTCGAAACCTGGGA...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGTGTCTCAAGGAAGTCTaGAAACATCTGGAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQCLKEV*KHLERG
Trigger: TCCTCTCTCCAGATGTTTCCAGACTTCCTTGAGACA...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGCAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTG +
Preference number: 2 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLQATHS*IPGFEV
Trigger: CACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTG...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR GCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGCCAGCACTTCACTGTaGAGGCCACACATTCCTGAA +
Preference number: 2 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLASTSL*RPHIPE
Trigger: TTCAGGAATGTGTGGCCTGCACAGTGAAGTGCTGGC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTCAGGTTTCGAAGTGGTaGTCTTGTTGCTTAAAGTTC +
Preference number: 2 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSQVSKW*SCCLKF
Trigger: GAACTTTAAGCAACAAGACCACCACTTCGAAACCTG...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACTCCCAGGTTTCGAAGTaGTGGTCTTGTTGCTTAAAG +
Preference number: 2 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYSQVSK*WSCCLK
Trigger: CTTTAAGCAACAAGACCACCACTTCGAAACCTGGGA...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGGCCCCAGTGAGTTCTaGAGGCCCCAGTTTGAATTC +
Preference number: 2 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEGPSEF*RPQFEF
Trigger: GAATTCAAACTGGGGCCTCCAGAACTCACTGGGGCC...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACTGTCTCAAGGAAGTCTaGAAACATCTGGAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYCLKEV*KHLERG
Trigger: TCCTCTCTCCAGATGTTTCCAGACTTCCTTGAGACA...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGCAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTG +
Preference number: 2 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEQATHS*IPGFEV
Trigger: CACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTG...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGAACCAAAGGCTCCCTaGTCTCCAGATTCCAGATGT +
Preference number: 2 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLEPKAP*SPDSRC
Trigger: ACATCTGGAATCTGGAGACCAGGGAGCCTTTGGTTC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGTGTCAATTTCTAGGTaGGGTCTTCTCAAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLVSISR*GLLKSC
Trigger: GCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGTCCCAGGTTTCGAAGTaGTGGTCTTGTTGCTTAAAG +
Preference number: 2 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLSQVSK*WSCCLK
Trigger: CTTTAAGCAACAAGACCACCACTTCGAAACCTGGGA...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGAACCAAAGGCTCCCTaGTCTCCAGATTCCAGATGT +
Preference number: 2 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEEPKAP*SPDSRC
Trigger: ACATCTGGAATCTGGAGACCAGGGAGCCTTTGGTTC...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR TCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGTGTCAATTTCTAGGTaGGGTCTTCTCAAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEVSISR*GLLKSC
Trigger: GCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGCAGGTTTCGAAGTGGTaGTCTTGTTGCTTAAAGTTC +
Preference number: 2 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLQVSKW*SCCLKF
Trigger: GAACTTTAAGCAACAAGACCACCACTTCGAAACCTG...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGTCCCAGGTTTCGAAGTaGTGGTCTTGTTGCTTAAAG +
Preference number: 2 (lower is better)
Translates to: LHGNSLLFSSVFTENMSESQVSK*WSCCLK
Trigger: CTTTAAGCAACAAGACCACCACTTCGAAACCTGGGA...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGTGTCTCAAGGAAGTCTaGAAACATCTGGAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: LHGNSLLFSSVFTENMSECLKEV*KHLERG
Trigger: TCCTCTCTCCAGATGTTTCCAGACTTCCTTGAGACA...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGCAGGTTTCGAAGTGGTaGTCTTGTTGCTTAAAGTTC +
Preference number: 2 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEQVSKW*SCCLKF
Trigger: GAACTTTAAGCAACAAGACCACCACTTCGAAACCTG...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGGGCAGGGGAGGCGTTaGGGAAGGTTGGATGTTCGT +
Preference number: 3 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGGQGRR*GRLDVR
Trigger: ACGAACATCCAACCTTCCCAAACGCCTCCCCTGCCC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCAAGGCAGCTCCTACATaGGGTCCCCCAGGATACCCC +
Preference number: 3 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGKAAPT*GPPGYP
Trigger: GGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGAAGGCAGCTCCTACATaGGGTCCCCCAGGATACCCC +
Preference number: 3 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQKAAPT*GPPGYP
Trigger: GGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTTGAGCCAGAAGAGGTaGAGGGTGTCTGAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGLSQKR*RVSEGG
Trigger: CCCTCCTTCAGACACCCTCAACCTCTTCTGGCTCAA...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTTGAGCCAGAAGAGGTaGAGGGTGTCTGAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSLSQKR*RVSEGG
Trigger: CCCTCCTTCAGACACCCTCAACCTCTTCTGGCTCAA...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGGGCAGGGGAGGCGTTaGGGAAGGTTGGATGTTCGT +
Preference number: 3 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPGQGRR*GRLDVR
Trigger: ACGAACATCCAACCTTCCCAAACGCCTCCCCTGCCC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCCCCCAATTCTCTTTTaGAGCCAGAAGAGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREPPILF*SQKRLR
Trigger: CCTCAACCTCTTCTGGCTCAAAAAGAGAATTGGGGG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCCATGGGAACAGCCTATaGTTCAGCTCCGTTTTCACG +
Preference number: 3 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGHGNSL*FSSVFT
Trigger: CGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATG...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR CCA 72 bp AACATAAATAGAGGGAGCTGGCTCCATGGGGAGGGCTaGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTG +
Preference number: 3 (lower is better)
Translates to: NINRGSWLHGEG*APCLKEVWKHL
Trigger: CAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCATGGAGCCAGCTCCCTCTATTTATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGGGCAGGGGAGGCGTTaGGGAAGGTTGGATGTTCGT +
Preference number: 3 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIGQGRR*GRLDVR
Trigger: ACGAACATCCAACCTTCCCAAACGCCTCCCCTGCCC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCATTGAGCCAGAAGAGGTaGAGGGTGTCTGAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPLSQKR*RVSEGG
Trigger: CCCTCCTTCAGACACCCTCAACCTCTTCTGGCTCAA...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCCCCCAATTCTCTTTTaGAGCCAGAAGAGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQPPILF*SQKRLR
Trigger: CCTCAACCTCTTCTGGCTCAAAAAGAGAATTGGGGG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAAGGCAGCTCCTACATaGGGTCCCCCAGGATACCCC +
Preference number: 3 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLKAAPT*GPPGYP
Trigger: GGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR CCA 72 bp GCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTaGAGAGAGGAAGGCCTAAGGTCCACTTGTGTCAAT +
Preference number: 3 (lower is better)
Translates to: AGLRVSRKSGNI*REEGLRSTCVN
Trigger: ATTGACACAAGTGGACCTTAGGCCTTCCTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGGGCAGGGGAGGCGTTaGGGAAGGTTGGATGTTCGT +
Preference number: 3 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEGQGRR*GRLDVR
Trigger: ACGAACATCCAACCTTCCCAAACGCCTCCCCTGCCC...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGGGCAGGGGAGGCGTTaGGGAAGGTTGGATGTTCGT +
Preference number: 3 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSGQGRR*GRLDVR
Trigger: ACGAACATCCAACCTTCCCAAACGCCTCCCCTGCCC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCTTGAGCCAGAAGAGGTaGAGGGTGTCTGAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPLSQKR*RVSEGG
Trigger: CCCTCCTTCAGACACCCTCAACCTCTTCTGGCTCAA...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGTTGAGCCAGAAGAGGTaGAGGGTGTCTGAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLLSQKR*RVSEGG
Trigger: CCCTCCTTCAGACACCCTCAACCTCTTCTGGCTCAA...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCCCCCAATTCTCTTTTaGAGCCAGAAGAGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYPPILF*SQKRLR
Trigger: CCTCAACCTCTTCTGGCTCAAAAAGAGAATTGGGGG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTAGGCCTAAGGTCCACTaGTGTCAATTTCTAGGTGAG +
Preference number: 3 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSRPKVH*CQFLGE
Trigger: CTCACCTAGAAATTGACACAAGTGGACCTTAGGCCT...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGAAGTGGTGGTCTTGTaGCTTAAAGTTCTAAGCTTG +
Preference number: 3 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREEVVVL*LKVLSL
Trigger: CAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTTCGAAGTGGTGGTCTaGTTGCTTAAAGTTCTAAGC +
Preference number: 3 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGFEVVV*LLKVLS
Trigger: GCTTAGAACTTTAAGCAACAAGACCACCACTTCGAA...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACAGGCCTAAGGTCCACTaGTGTCAATTTCTAGGTGAG +
Preference number: 3 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYRPKVH*CQFLGE
Trigger: CTCACCTAGAAATTGACACAAGTGGACCTTAGGCCT...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGAAGTGGTGGTCTTGTaGCTTAAAGTTCTAAGCTTG +
Preference number: 3 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSEVVVL*LKVLSL
Trigger: CAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTTCGAAGTGGTGGTCTaGTTGCTTAAAGTTCTAAGC +
Preference number: 3 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSFEVVV*LLKVLS
Trigger: GCTTAGAACTTTAAGCAACAAGACCACCACTTCGAA...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR TCA 72 bp CACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTaGCAGTTGGTCACCAAATCAGCATTGTTTAGACAA +
Preference number: 3 (lower is better)
Translates to: HNSPGEQRLSNE*QLVTKSALFRQ
Trigger: TTGTCTAAACAATGCTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGCCCCCAATTCTCTTTTaGAGCCAGAAGAGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLPPILF*SQKRLR
Trigger: CCTCAACCTCTTCTGGCTCAAAAAGAGAATTGGGGG...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACTTCGAAGTGGTGGTCTaGTTGCTTAAAGTTCTAAGC +
Preference number: 3 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYFEVVV*LLKVLS
Trigger: GCTTAGAACTTTAAGCAACAAGACCACCACTTCGAA...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR GCA 72 bp CAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGTaGAGGCCACACATTCCTGAATCCCAGGTTTCGAAG +
Preference number: 3 (lower is better)
Translates to: QFEFLVVASTSL*RPHIPESQVSK
Trigger: CTTCGAAACCTGGGATTCAGGAATGTGTGGCCTGCACAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGCCCCCAATTCTCTTTTaGAGCCAGAAGAGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEPPILF*SQKRLR
Trigger: CCTCAACCTCTTCTGGCTCAAAAAGAGAATTGGGGG...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGCCTAAGGTCCACTaGTGTCAATTTCTAGGTGAG +
Preference number: 3 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLRPKVH*CQFLGE
Trigger: CTCACCTAGAAATTGACACAAGTGGACCTTAGGCCT...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGAAGTGGTGGTCTTGTaGCTTAAAGTTCTAAGCTTG +
Preference number: 3 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLEVVVL*LKVLSL
Trigger: CAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGTTCGAAGTGGTGGTCTaGTTGCTTAAAGTTCTAAGC +
Preference number: 3 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLFEVVV*LLKVLS
Trigger: GCTTAGAACTTTAAGCAACAAGACCACCACTTCGAA...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGTTCGAAGTGGTGGTCTaGTTGCTTAAAGTTCTAAGC +
Preference number: 3 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLFEVVV*LLKVLS
Trigger: GCTTAGAACTTTAAGCAACAAGACCACCACTTCGAA...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR-3UTR CAA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGTTCGAAGTGGTGGTCTaGTTGCTTAAAGTTCTAAGC +
Preference number: 3 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEFEVVV*LLKVLS
Trigger: GCTTAGAACTTTAAGCAACAAGACCACCACTTCGAA...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGTGGCCAGGAGGGCATTaGCCCGGCGGTTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREWPGGH*PGGSAT
Trigger: AGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCA...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTGGCCAGGAGGGCATTaGCCCGGCGGTTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGWPGGH*PGGSAT
Trigger: AGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCA...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGCTCATACCAGGGCTTaGCCTCAGCCCCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGAHTRA*PQPPLG
Trigger: CCCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGGCAGAAGAGCGTGGTaGCGCCTGCCACGATCAGGA +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREGRRAW*RLPRSG
Trigger: TCCTGATCGTGGCAGGCGCCACCACGCTCTTCTGCC...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGTCAGCTCCACGCCATTaGCCAGGAGGGCATTGGCCC +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWRESAPRH*PGGHWP
Trigger: GGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGA...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGTGGAGGGGCAGCCTTaGCCCTTGAAGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGVEGQP*PLKRTW
Trigger: CCAGGTCCTCTTCAAGGGCCAAGGCTGCCCCTCCAC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGCTCATACCAGGGCTTaGCCTCAGCCCCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQAHTRA*PQPPLG
Trigger: CCCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGCTCATACCAGGGCTTaGCCTCAGCCCCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSAHTRA*PQPPLG
Trigger: CCCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACAGGGAGCTGGCTCCATaGGGAGGGCTGGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYRELAP*GGLGSV
Trigger: CACGGAGCCCAGCCCTCCCCATGGAGCCAGCTCCCT...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCCTGGGCCAGAGGGCTaGTTAGAGAGAGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQPGPEG*LERGPW
Trigger: CCAGGGACCTCTCTCTAATCAGCCCTCTGGCCCAGG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGGCAGCCTTGGCCCTTaGAGAGGACCTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGGSLGP*RGPGSR
Trigger: TCTACTCCCAGGTCCTCTTCAAGGGCCAAGGCTGCC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGAGCGTGGTGGCGCCTaGCACGATCAGGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGERGGA*HDQEGE
Trigger: TTCTCCTTCCTGATCGTGGCAGGCGCCACCACGCTC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCCAGGGGAGAGAGGGTaGAGCCGTGGGTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREPGERG*SRGSVC
Trigger: ACATACTGACCCACGGCTCCACCCTCTCTCCCCTGG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACTGGCCAGGAGGGCATTaGCCCGGCGGTTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYWPGGH*PGGSAT
Trigger: AGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCA...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTCAGCTCCACGCCATTaGCCAGGAGGGCATTGGCCC +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSSAPRH*PGGHWP
Trigger: GGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGA...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGTGGAGGGGCAGCCTTaGCCCTTGAAGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSVEGQP*PLKRTW
Trigger: CCAGGTCCTCTTCAAGGGCCAAGGCTGCCCCTCCAC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGGTGAGGAGCACATaGGTGGAGGGGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSWVRST*VEGQPW
Trigger: CCAAGGCTGCCCCTCCACCCATGTGCTCCTCACCCA...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCTGGGGTCTCCCTCTaGCAGGGGCTCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGSGVSL*QGLLMA
Trigger: TGCCATCAAGAGCCCCTGCCAGAGGGAGACCCCAGA...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGCTCATACCAGGGCTTaGCCTCAGCCCCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYAHTRA*PQPPLG
Trigger: CCCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCCTCCATGGGGAGGGCTaGGCTCCGTGTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGLHGEG*APCLKE
Trigger: TTCCTTGAGACACGGAGCCCAGCCCTCCCCATGGAG...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCTCCATGGGGAGGGCTaGGCTCCGTGTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWRELHGEG*APCLKE
Trigger: TTCCTTGAGACACGGAGCCCAGCCCTCCCCATGGAG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCAGGCAGCTCCTACATTaGGTCCCCCAGGATACCCCG +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGRQLLH*VPQDTP
Trigger: CGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCT...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGAGGCAGCTCCTACATTaGGTCCCCCAGGATACCCCG +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWRERQLLH*VPQDTP
Trigger: CGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCT...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGTTCGAGAAGATGATCTaGCTGCCTGGGCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREFEKMI*LPGPEG
Trigger: GCCCTCTGGCCCAGGCAGTCAGATCATCTTCTCGAA...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGGCAGCCTTGGCCCTTaGAGAGGACCTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQGSLGP*RGPGSR
Trigger: TCTACTCCCAGGTCCTCTTCAAGGGCCAAGGCTGCC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGGCAGCCTTGGCCCTTaGAGAGGACCTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSGSLGP*RGPGSR
Trigger: TCTACTCCCAGGTCCTCTTCAAGGGCCAAGGCTGCC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGAGCGTGGTGGCGCCTaGCACGATCAGGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQERGGA*HDQEGE
Trigger: TTCTCCTTCCTGATCGTGGCAGGCGCCACCACGCTC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACTCAGCTCCACGCCATTaGCCAGGAGGGCATTGGCCC +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYSAPRH*PGGHWP
Trigger: GGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGA...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCATGCGGCTGATGGTGTaGGTGAGGAGCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGMRLMV*VRSTWV
Trigger: CACCCATGTGCTCCTCACCCACACCATCAGCCGCAT...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGCTCATACCAGGGCTTaGCCTCAGCCCCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPAHTRA*PQPPLG
Trigger: CCCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCCCCTCCCAGATAGATaGGCTCATACCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREPLPDR*AHTRAW
Trigger: CCAAGCCCTGGTATGAGCCCATCTATCTGGGAGGGG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCCCCCTCCCAGATAGATaGGCTCATACCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGPLPDR*AHTRAW
Trigger: CCAAGCCCTGGTATGAGCCCATCTATCTGGGAGGGG...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGAGGGAGCTGGCTCCATaGGGAGGGCTGGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLRELAP*GGLGSV
Trigger: CACGGAGCCCAGCCCTCCCCATGGAGCCAGCTCCCT...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGAGGCAGCTCCTACATTaGGTCCCCCAGGATACCCCG +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQRQLLH*VPQDTP
Trigger: CGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCT...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCAGACACAACTCCCCTaGGGAGCAGAGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREQTQLP*GAEAQQ
Trigger: TTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCCGTGGGTCAGTATGTaGGAGGAAGAGAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREPWVSM*EEENLP
Trigger: AGGCAGGTTCTCTTCCTCTCACATACTGACCCACGG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCACCTGGGCCAGAGGGCTaGTTAGAGAGAGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPPGPEG*LERGPW
Trigger: CCAGGGACCTCTCTCTAATCAGCCCTCTGGCCCAGG...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTTCGAGAAGATGATCTaGCTGCCTGGGCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSFEKMI*LPGPEG
Trigger: GCCCTCTGGCCCAGGCAGTCAGATCATCTTCTCGAA...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGGACCTGGGAGTAGATaGGGTACAGGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSGPGSR*GTGPLM
Trigger: CATCAGAGGGCCTGTACCTCATCTACTCCCAGGTCC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGGACCTGGGAGTAGATaGGGTACAGGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQGPGSR*GTGPLM
Trigger: CATCAGAGGGCCTGTACCTCATCTACTCCCAGGTCC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGGCAGCCTTGGCCCTTaGAGAGGACCTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYGSLGP*RGPGSR
Trigger: TCTACTCCCAGGTCCTCTTCAAGGGCCAAGGCTGCC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCCTCCTCACAGGGCAATaGTCCCAAAGTAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGLLTGQ*SQSRPA
Trigger: GGCAGGTCTACTTTGGGATCATTGCCCTGTGAGGAG...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCTCCTCACAGGGCAATaGTCCCAAAGTAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWRELLTGQ*SQSRPA
Trigger: GGCAGGTCTACTTTGGGATCATTGCCCTGTGAGGAG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCCGATCACTCCAAAGTaGAGCAGGCAGAAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREPITPK*SRQKSV
Trigger: CACGCTCTTCTGCCTGCTGCACTTTGGAGTGATCGG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGGAAGAGAACCTGCCTaGCAGCTTGTCAGGGGATGT +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREGREPA*QLVRGC
Trigger: ACATCCCCTGACAAGCTGCCAGGCAGGTTCTCTTCC...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCCAGGGGAGAGAGGGTaGAGCCGTGGGTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYPGERG*SRGSVC
Trigger: ACATACTGACCCACGGCTCCACCCTCTCTCCCCTGG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGGCAGAAGAGCGTGGTaGCGCCTGCCACGATCAGGA +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPGRRAW*RLPRSG
Trigger: TCCTGATCGTGGCAGGCGCCACCACGCTCTTCTGCC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGGGAACTCTTCCCTCTaGGGGCCGATCACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQGNSSL*GPITPK
Trigger: CTTTGGAGTGATCGGCCCCCAGAGGGAAGAGTTCCC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTTAGAGAGAGGTCCCTaGGGAACTCTTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGLERGP*GTLPSG
Trigger: CCCAGAGGGAAGAGTTCCCCAGGGACCTCTCTCTAA...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGTTAGAGAGAGGTCCCTaGGGAACTCTTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWRELERGP*GTLPSG
Trigger: CCCAGAGGGAAGAGTTCCCCAGGGACCTCTCTCTAA...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGATGGCACCACCAGCTaGTTATCTCTCAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGDGTTS*LSLSST
Trigger: CGTGGAGCTGAGAGATAACCAGCTGGTGGTGCCATC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGTGGAGGGGCAGCCTTaGCCCTTGAAGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPVEGQP*PLKRTW
Trigger: CCAGGTCCTCTTCAAGGGCCAAGGCTGCCCCTCCAC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTATGCGGCTGATGGTGTaGGTGAGGAGCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSMRLMV*VRSTWV
Trigger: CACCCATGTGCTCCTCACCCACACCATCAGCCGCAT...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACTCTGGGGTCTCCCTCTaGCAGGGGCTCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYSGVSL*QGLLMA
Trigger: TGCCATCAAGAGCCCCTGCCAGAGGGAGACCCCAGA...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGCTCATACCAGGGCTTaGCCTCAGCCCCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPAHTRA*PQPPLG
Trigger: CCCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGGCAGGGGAGGCGTTTaGGAAGGTTGGATGTTCGTC +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSGRGGV*EGWMFV
Trigger: GACGAACATCCAACCTTCCCAAACGCCTCCCCTGCC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCTCCATGGGGAGGGCTaGGCTCCGTGTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYLHGEG*APCLKE
Trigger: TTCCTTGAGACACGGAGCCCAGCCCTCCCCATGGAG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTAGGGAGCTGGCTCCATaGGGAGGGCTGGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIRELAP*GGLGSV
Trigger: CACGGAGCCCAGCCCTCCCCATGGAGCCAGCTCCCT...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGATAAATAGAGGGAGCTaGCTCCATGGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREINRGS*LHGEGW
Trigger: CCAGCCCTCCCCATGGAGCCAGCTCCCTCTATTTAT...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCAGACACAACTCCCCTaGGGAGCAGAGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQQTQLP*GAEAQQ
Trigger: TTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTCAGACACAACTCCCCTaGGGAGCAGAGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSQTQLP*GAEAQQ
Trigger: TTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTG...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCCGTGGGTCAGTATGTaGGAGGAAGAGAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQPWVSM*EEENLP
Trigger: AGGCAGGTTCTCTTCCTCTCACATACTGACCCACGG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCTGGGCCAGAGGGCTaGTTAGAGAGAGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPPGPEG*LERGPW
Trigger: CCAGGGACCTCTCTCTAATCAGCCCTCTGGCCCAGG...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGCCTGGGCCAGAGGGCTaGTTAGAGAGAGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLPGPEG*LERGPW
Trigger: CCAGGGACCTCTCTCTAATCAGCCCTCTGGCCCAGG...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACTTCGAGAAGATGATCTaGCTGCCTGGGCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYFEKMI*LPGPEG
Trigger: GCCCTCTGGCCCAGGCAGTCAGATCATCTTCTCGAA...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTAGCTGCCCCTCAGCTTaGGGGTTTGCTACAACATGG +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSSCPSA*GFATTW
Trigger: CCATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCT...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGGACCTGGGAGTAGATaGGGTACAGGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYGPGSR*GTGPLM
Trigger: CATCAGAGGGCCTGTACCTCATCTACTCCCAGGTCC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTCTCCTCACAGGGCAATaGTCCCAAAGTAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSLLTGQ*SQSRPA
Trigger: GGCAGGTCTACTTTGGGATCATTGCCCTGTGAGGAG...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCCAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGQATHS*IPGFEV
Trigger: CACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTG...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREQATHS*IPGFEV
Trigger: CACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCTGGAGGCCCCAGTTTaGATTCTTAGTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWRELEAPV*ILSGCQ
Trigger: CTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAAGCTGTAGGCCCCAGTaGGTTCTGGAGGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPSCRPQ*VLEAPV
Trigger: AACTGGGGCCTCCAGAACTCACTGGGGCCTACAGCT...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGCAGAGGCTCAGCAATaGGTGACAGTTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGAEAQQ*VTVGHQ
Trigger: TTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGCAGAGGCTCAGCAATaGGTGACAGTTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREAEAQQ*VTVGHQ
Trigger: TTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGC...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGAGAGGAAGAGAACCTaGCTGGCAGCTTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYERKRT*LAACQG
Trigger: CCCCTGACAAGCTGCCAGGCAGGTTCTCTTCCTCTC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTCCGATCACTCCAAAGTaGAGCAGGCAGAAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSPITPK*SRQKSV
Trigger: CACGCTCTTCTGCCTGCTGCACTTTGGAGTGATCGG...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCCGATCACTCCAAAGTaGAGCAGGCAGAAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQPITPK*SRQKSV
Trigger: CACGCTCTTCTGCCTGCTGCACTTTGGAGTGATCGG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGCTTGTCAGGGGATGTaGCGTCTGAGGGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGACQGM*RLRVVF
Trigger: GAAAACAACCCTCAGACGCCACATCCCCTGACAAGC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGGCAGAAGAGCGTGGTaGCGCCTGCCACGATCAGGA +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPGRRAW*RLPRSG
Trigger: TCCTGATCGTGGCAGGCGCCACCACGCTCTTCTGCC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGGCAGAAGAGCGTGGTaGCGCCTGCCACGATCAGGA +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLGRRAW*RLPRSG
Trigger: TCCTGATCGTGGCAGGCGCCACCACGCTCTTCTGCC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTTAGAGAGAGGTCCCTaGGGAACTCTTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSLERGP*GTLPSG
Trigger: CCCAGAGGGAAGAGTTCCCCAGGGACCTCTCTCTAA...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGATGATCTGACTGCCTaGGCCAGAGGGCTGATTAGA +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREDDLTA*ARGLIR
Trigger: TCTAATCAGCCCTCTGGCCCAGGCAGTCAGATCATC...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTTGGCCAGGAGGGCATTaGCCCGGCGGTTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIWPGGH*PGGSAT
Trigger: AGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCA...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGTGGCCAGGAGGGCATTaGCCCGGCGGTTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLWPGGH*PGGSAT
Trigger: AGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCA...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCTCAGCTCCACGCCATTaGCCAGGAGGGCATTGGCCC +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPSAPRH*PGGHWP
Trigger: GGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGA...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGTGGAGGGGCAGCCTTaGCCCTTGAAGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLVEGQP*PLKRTW
Trigger: CCAGGTCCTCTTCAAGGGCCAAGGCTGCCCCTCCAC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCTGGGTGAGGAGCACATaGGTGGAGGGGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPWVRST*VEGQPW
Trigger: CCAAGGCTGCCCCTCCACCCATGTGCTCCTCACCCA...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGCTCATACCAGGGCTTaGCCTCAGCCCCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIAHTRA*PQPPLG
Trigger: CCCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCCCCTCCCAGATAGATaGGCTCATACCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYPLPDR*AHTRAW
Trigger: CCAAGCCCTGGTATGAGCCCATCTATCTGGGAGGGG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGGCCCCAGTGAGTTCTaGAGGCCCCAGTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQGPSEF*RPQFEF
Trigger: GAATTCAAACTGGGGCCTCCAGAACTCACTGGGGCC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCAGGGAGCTGGCTCCATaGGGAGGGCTGGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSRELAP*GGLGSV
Trigger: CACGGAGCCCAGCCCTCCCCATGGAGCCAGCTCCCT...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCCTGGGCCAGAGGGCTaGTTAGAGAGAGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIPGPEG*LERGPW
Trigger: CCAGGGACCTCTCTCTAATCAGCCCTCTGGCCCAGG...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGGACCTGGGAGTAGATaGGGTACAGGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPGPGSR*GTGPLM
Trigger: CATCAGAGGGCCTGTACCTCATCTACTCCCAGGTCC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGGCAGCCTTGGCCCTTaGAGAGGACCTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPGSLGP*RGPGSR
Trigger: TCTACTCCCAGGTCCTCTTCAAGGGCCAAGGCTGCC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQQATHS*IPGFEV
Trigger: CACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTCAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSQATHS*IPGFEV
Trigger: CACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTG...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCAGCTGTAGGCCCCAGTaGGTTCTGGAGGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPSCRPQ*VLEAPV
Trigger: AACTGGGGCCTCCAGAACTCACTGGGGCCTACAGCT...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGCAGAGGCTCAGCAATaGGTGACAGTTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQAEAQQ*VTVGHQ
Trigger: TTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGCAGAGGCTCAGCAATaGGTGACAGTTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSAEAQQ*VTVGHQ
Trigger: TTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGAGCGTGGTGGCGCCTaGCACGATCAGGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPERGGA*HDQEGE
Trigger: TTCTCCTTCCTGATCGTGGCAGGCGCCACCACGCTC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGAGCGTGGTGGCGCCTaGCACGATCAGGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLERGGA*HDQEGE
Trigger: TTCTCCTTCCTGATCGTGGCAGGCGCCACCACGCTC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCCGATCACTCCAAAGTaGAGCAGGCAGAAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYPITPK*SRQKSV
Trigger: CACGCTCTTCTGCCTGCTGCACTTTGGAGTGATCGG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCCTCAGCTTGAGGGTTTaGTACAACATGGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGLSLRV*YNMGYR
Trigger: CCTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAG...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGCCAGCACTTCACTGTaGAGGCCACACATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSASTSL*RPHIPE
Trigger: TTCAGGAATGTGTGGCCTGCACAGTGAAGTGCTGGC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGCCAGGGGAGAGAGGGTaGAGCCGTGGGTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLPGERG*SRGSVC
Trigger: ACATACTGACCCACGGCTCCACCCTCTCTCCCCTGG...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGGGAACTCTTCCCTCTaGGGGCCGATCACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPGNSSL*GPITPK
Trigger: CTTTGGAGTGATCGGCCCCCAGAGGGAAGAGTTCCC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGATGATCTGACTGCCTaGGCCAGAGGGCTGATTAGA +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSDDLTA*ARGLIR
Trigger: TCTAATCAGCCCTCTGGCCCAGGCAGTCAGATCATC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCTGGCCAGGAGGGCATTaGCCCGGCGGTTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSWPGGH*PGGSAT
Trigger: AGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCA...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGTGGCCAGGAGGGCATTaGCCCGGCGGTTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEWPGGH*PGGSAT
Trigger: AGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCA...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGATGGCACCACCAGCTaGTTATCTCTCAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYDGTTS*LSLSST
Trigger: CGTGGAGCTGAGAGATAACCAGCTGGTGGTGCCATC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGTGGAGGGGCAGCCTTaGCCCTTGAAGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLVEGQP*PLKRTW
Trigger: CCAGGTCCTCTTCAAGGGCCAAGGCTGCCCCTCCAC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGTGGGTGAGGAGCACATaGGTGGAGGGGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLWVRST*VEGQPW
Trigger: CCAAGGCTGCCCCTCCACCCATGTGCTCCTCACCCA...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGTCTGGGGTCTCCCTCTaGCAGGGGCTCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLSGVSL*QGLLMA
Trigger: TGCCATCAAGAGCCCCTGCCAGAGGGAGACCCCAGA...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCTCTGGGGTCTCCCTCTaGCAGGGGCTCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPSGVSL*QGLLMA
Trigger: TGCCATCAAGAGCCCCTGCCAGAGGGAGACCCCAGA...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCACCCCTCCCAGATAGATaGGCTCATACCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPPLPDR*AHTRAW
Trigger: CCAAGCCCTGGTATGAGCCCATCTATCTGGGAGGGG...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGGCGTTTGGGAAGGTTaGATGTTCGTCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSGVWEG*MFVLLT
Trigger: TGTGAGGAGGACGAACATCCAACCTTCCCAAACGCC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGAACCAAAGGCTCCCTaGTCTCCAGATTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGEPKAP*SPDSRC
Trigger: ACATCTGGAATCTGGAGACCAGGGAGCCTTTGGTTC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCTCCATGGGGAGGGCTaGGCTCCGTGTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPLHGEG*APCLKE
Trigger: TTCCTTGAGACACGGAGCCCAGCCCTCCCCATGGAG...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGCTCCATGGGGAGGGCTaGGCTCCGTGTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLLHGEG*APCLKE
Trigger: TTCCTTGAGACACGGAGCCCAGCCCTCCCCATGGAG...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACATAAATAGAGGGAGCTaGCTCCATGGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYINRGS*LHGEGW
Trigger: CCAGCCCTCCCCATGGAGCCAGCTCCCTCTATTTAT...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGAGGCAGCTCCTACATTaGGTCCCCCAGGATACCCCG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLRQLLH*VPQDTP
Trigger: CGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCT...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGGCCAGGGGGCTACATaGGAACAGCCTATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYGQGAT*EQPIVQ
Trigger: CTGAACAATAGGCTGTTCCCATGTAGCCCCCTGGCC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
3UTR CAA 72 bp AGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTaGAGCCAGAAGAGGTTGAGGGTGTCTGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLGSDPKPPILF*SQKRLRVSEGG
Trigger: CCCTCCTTCAGACACCCTCAACCTCTTCTGGCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGCCTGGGCCAGAGGGCTaGTTAGAGAGAGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEPGPEG*LERGPW
Trigger: CCAGGGACCTCTCTCTAATCAGCCCTCTGGCCCAGG...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGTTCGAGAAGATGATCTaGCTGCCTGGGCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLFEKMI*LPGPEG
Trigger: GCCCTCTGGCCCAGGCAGTCAGATCATCTTCTCGAA...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAAGCTGCCCCTCAGCTTaGGGGTTTGCTACAACATGG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPSCPSA*GFATTW
Trigger: CCATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCT...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGGACCTGGGAGTAGATaGGGTACAGGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLGPGSR*GTGPLM
Trigger: CATCAGAGGGCCTGTACCTCATCTACTCCCAGGTCC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGGCAGCCTTGGCCCTTaGAGAGGACCTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLGSLGP*RGPGSR
Trigger: TCTACTCCCAGGTCCTCTTCAAGGGCCAAGGCTGCC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCATGGCAGAGAGGAGGTTaGCCTTGGTCTGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPWQRGG*PWSGRR
Trigger: TCTCCTACCAGACCAAGGTCAACCTCCTCTCTGCCA...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCTGGAGGCCCCAGTTTaGATTCTTAGTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYLEAPV*ILSGCQ
Trigger: CTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTAGCTGTAGGCCCCAGTaGGTTCTGGAGGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPISCRPQ*VLEAPV
Trigger: AACTGGGGCCTCCAGAACTCACTGGGGCCTACAGCT...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGTGTCAATTTCTAGGTaGGGTCTTCTCAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGVSISR*GLLKSC
Trigger: GCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCACGGAAAACATGTCTaGGCCAAGGCAGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYHGKHV*AKAAPT
Trigger: TGTAGGAGCTGCCTTGGCTCAGACATGTTTTCCGTG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGAGAGGAAGAGAACCTaGCTGGCAGCTTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLERKRT*LAACQG
Trigger: CCCCTGACAAGCTGCCAGGCAGGTTCTCTTCCTCTC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGAGCGTGGTGGCGCCTaGCACGATCAGGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLERGGA*HDQEGE
Trigger: TTCTCCTTCCTGATCGTGGCAGGCGCCACCACGCTC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCTCAGCTTGAGGGTTTaGTACAACATGGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQLSLRV*YNMGYR
Trigger: CCTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGCTTGTCAGGGGATGTaGCGTCTGAGGGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYACQGM*RLRVVF
Trigger: GAAAACAACCCTCAGACGCCACATCCCCTGACAAGC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGGAAGAGAACCTGCCTaGCAGCTTGTCAGGGGATGT +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPGREPA*QLVRGC
Trigger: ACATCCCCTGACAAGCTGCCAGGCAGGTTCTCTTCC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGCCAGGGGAGAGAGGGTaGAGCCGTGGGTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLPGERG*SRGSVC
Trigger: ACATACTGACCCACGGCTCCACCCTCTCTCCCCTGG...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGGCAGAAGAGCGTGGTaGCGCCTGCCACGATCAGGA +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSGRRAW*RLPRSG
Trigger: TCCTGATCGTGGCAGGCGCCACCACGCTCTTCTGCC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCATTAGAGAGAGGTCCCTaGGGAACTCTTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPLERGP*GTLPSG
Trigger: CCCAGAGGGAAGAGTTCCCCAGGGACCTCTCTCTAA...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGATGATCTGACTGCCTaGGCCAGAGGGCTGATTAGA +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYDDLTA*ARGLIR
Trigger: TCTAATCAGCCCTCTGGCCCAGGCAGTCAGATCATC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGGGTTTGCTACAACATaGGCTACAGGCTTGTCACTC +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQGFATT*ATGLSL
Trigger: GAGTGACAAGCCTGTAGCCCATGTTGTAGCAAACCC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCTCAGCTCCACGCCATTaGCCAGGAGGGCATTGGCCC +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSSAPRH*PGGHWP
Trigger: GGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGA...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGTGGGTGAGGAGCACATaGGTGGAGGGGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEWVRST*VEGQPW
Trigger: CCAAGGCTGCCCCTCCACCCATGTGCTCCTCACCCA...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCTGGGTGAGGAGCACATaGGTGGAGGGGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSWVRST*VEGQPW
Trigger: CCAAGGCTGCCCCTCCACCCATGTGCTCCTCACCCA...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCATGCGGCTGATGGTGTaGGTGAGGAGCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPMRLMV*VRSTWV
Trigger: CACCCATGTGCTCCTCACCCACACCATCAGCCGCAT...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGATGCGGCTGATGGTGTaGGTGAGGAGCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLMRLMV*VRSTWV
Trigger: CACCCATGTGCTCCTCACCCACACCATCAGCCGCAT...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGTCTGGGGTCTCCCTCTaGCAGGGGCTCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLSGVSL*QGLLMA
Trigger: TGCCATCAAGAGCCCCTGCCAGAGGGAGACCCCAGA...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGCCCCTCCCAGATAGATaGGCTCATACCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLPLPDR*AHTRAW
Trigger: CCAAGCCCTGGTATGAGCCCATCTATCTGGGAGGGG...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGGCAGGGGAGGCGTTTaGGAAGGTTGGATGTTCGTC +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLGRGGV*EGWMFV
Trigger: GACGAACATCCAACCTTCCCAAACGCCTCCCCTGCC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGAACCAAAGGCTCCCTaGTCTCCAGATTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQEPKAP*SPDSRC
Trigger: ACATCTGGAATCTGGAGACCAGGGAGCCTTTGGTTC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCCATGGGGAGGGCTaGGCTCCGTGTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPILHGEG*APCLKE
Trigger: TTCCTTGAGACACGGAGCCCAGCCCTCCCCATGGAG...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATAAATAGAGGGAGCTaGCTCCATGGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPINRGS*LHGEGW
Trigger: CCAGCCCTCCCCATGGAGCCAGCTCCCTCTATTTAT...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGGCCAGGGGGCTACATaGGAACAGCCTATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPGQGAT*EQPIVQ
Trigger: CTGAACAATAGGCTGTTCCCATGTAGCCCCCTGGCC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCAGACACAACTCCCCTaGGGAGCAGAGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPQTQLP*GAEAQQ
Trigger: TTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTG...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGCCGTGGGTCAGTATGTaGGAGGAAGAGAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLPWVSM*EEENLP
Trigger: AGGCAGGTTCTCTTCCTCTCACATACTGACCCACGG...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTTTCGAGAAGATGATCTaGCTGCCTGGGCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIFEKMI*LPGPEG
Trigger: GCCCTCTGGCCCAGGCAGTCAGATCATCTTCTCGAA...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGAGCTGCCCCTCAGCTTaGGGGTTTGCTACAACATGG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLSCPSA*GFATTW
Trigger: CCATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCT...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGGACCTGGGAGTAGATaGGGTACAGGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIGPGSR*GTGPLM
Trigger: CATCAGAGGGCCTGTACCTCATCTACTCCCAGGTCC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGGACCTGGGAGTAGATaGGGTACAGGCCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLGPGSR*GTGPLM
Trigger: CATCAGAGGGCCTGTACCTCATCTACTCCCAGGTCC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGGCAGCCTTGGCCCTTaGAGAGGACCTGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEGSLGP*RGPGSR
Trigger: TCTACTCCCAGGTCCTCTTCAAGGGCCAAGGCTGCC...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGTGGCAGAGAGGAGGTTaGCCTTGGTCTGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLWQRGG*PWSGRR
Trigger: TCTCCTACCAGACCAAGGTCAACCTCCTCTCTGCCA...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGCTCCTCACAGGGCAATaGTCCCAAAGTAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLLLTGQ*SQSRPA
Trigger: GGCAGGTCTACTTTGGGATCATTGCCCTGTGAGGAG...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCACAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPQATHS*IPGFEV
Trigger: CACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTG...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGTGTCAATTTCTAGGTaGGGTCTTCTCAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQVSISR*GLLKSC
Trigger: GCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCACACGGAAAACATGTCTaGGCCAAGGCAGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPHGKHV*AKAAPT
Trigger: TGTAGGAGCTGCCTTGGCTCAGACATGTTTTCCGTG...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGAGAGGAAGAGAACCTaGCTGGCAGCTTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIERKRT*LAACQG
Trigger: CCCCTGACAAGCTGCCAGGCAGGTTCTCTTCCTCTC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGAGAGGAAGAGAACCTaGCTGGCAGCTTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLERKRT*LAACQG
Trigger: CCCCTGACAAGCTGCCAGGCAGGTTCTCTTCCTCTC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGAGCGTGGTGGCGCCTaGCACGATCAGGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSERGGA*HDQEGE
Trigger: TTCTCCTTCCTGATCGTGGCAGGCGCCACCACGCTC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCTCAGCTTGAGGGTTTaGTACAACATGGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYLSLRV*YNMGYR
Trigger: CCTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGCCAGCACTTCACTGTaGAGGCCACACATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPASTSL*RPHIPE
Trigger: TTCAGGAATGTGTGGCCTGCACAGTGAAGTGCTGGC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGCCAGGGGAGAGAGGGTaGAGCCGTGGGTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEPGERG*SRGSVC
Trigger: ACATACTGACCCACGGCTCCACCCTCTCTCCCCTGG...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACTGCTTTCAGTGCTCATaGTGTCCTTTCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYCFQCS*CPFQGR
Trigger: TCTCCCCTGGAAAGGACACCATGAGCACTGAAAGCA...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGGGAACTCTTCCCTCTaGGGGCCGATCACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLGNSSL*GPITPK
Trigger: CTTTGGAGTGATCGGCCCCCAGAGGGAAGAGTTCCC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGGGTTTGCTACAACATaGGCTACAGGCTTGTCACTC +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYGFATT*ATGLSL
Trigger: GAGTGACAAGCCTGTAGCCCATGTTGTAGCAAACCC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGATGGCACCACCAGCTaGTTATCTCTCAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLDGTTS*LSLSST
Trigger: CGTGGAGCTGAGAGATAACCAGCTGGTGGTGCCATC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGATGGCACCACCAGCTaGTTATCTCTCAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPDGTTS*LSLSST
Trigger: CGTGGAGCTGAGAGATAACCAGCTGGTGGTGCCATC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTATGCGGCTGATGGTGTaGGTGAGGAGCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIMRLMV*VRSTWV
Trigger: CACCCATGTGCTCCTCACCCACACCATCAGCCGCAT...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGATGCGGCTGATGGTGTaGGTGAGGAGCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLMRLMV*VRSTWV
Trigger: CACCCATGTGCTCCTCACCCACACCATCAGCCGCAT...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCTCTGGGGTCTCCCTCTaGCAGGGGCTCTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSSGVSL*QGLLMA
Trigger: TGCCATCAAGAGCCCCTGCCAGAGGGAGACCCCAGA...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGCCCCTCCCAGATAGATaGGCTCATACCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLPLPDR*AHTRAW
Trigger: CCAAGCCCTGGTATGAGCCCATCTATCTGGGAGGGG...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGGCAGGGGAGGCGTTTaGGAAGGTTGGATGTTCGTC +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLGRGGV*EGWMFV
Trigger: GACGAACATCCAACCTTCCCAAACGCCTCCCCTGCC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGGCCCCAGTGAGTTCTaGAGGCCCCAGTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPGPSEF*RPQFEF
Trigger: GAATTCAAACTGGGGCCTCCAGAACTCACTGGGGCC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCAGGCAGCTCCTACATTaGGTCCCCCAGGATACCCCG +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSRQLLH*VPQDTP
Trigger: CGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCT...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGCCGTGGGTCAGTATGTaGGAGGAAGAGAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLPWVSM*EEENLP
Trigger: AGGCAGGTTCTCTTCCTCTCACATACTGACCCACGG...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCCGTGGGTCAGTATGTaGGAGGAAGAGAACCTGCCT +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIPWVSM*EEENLP
Trigger: AGGCAGGTTCTCTTCCTCTCACATACTGACCCACGG...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTAGCTGCCCCTCAGCTTaGGGGTTTGCTACAACATGG +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPISCPSA*GFATTW
Trigger: CCATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCT...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGTGGCAGAGAGGAGGTTaGCCTTGGTCTGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLWQRGG*PWSGRR
Trigger: TCTCCTACCAGACCAAGGTCAACCTCCTCTCTGCCA...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGCTGGAGGCCCCAGTTTaGATTCTTAGTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLLEAPV*ILSGCQ
Trigger: CTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAG...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCTGGAGGCCCCAGTTTaGATTCTTAGTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPLEAPV*ILSGCQ
Trigger: CTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAG...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGCACGGAAAACATGTCTaGGCCAAGGCAGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLHGKHV*AKAAPT
Trigger: TGTAGGAGCTGCCTTGGCTCAGACATGTTTTCCGTG...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCACGGAAAACATGTCTaGGCCAAGGCAGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPHGKHV*AKAAPT
Trigger: TGTAGGAGCTGCCTTGGCTCAGACATGTTTTCCGTG...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGCAGAGGCTCAGCAATaGGTGACAGTTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPAEAQQ*VTVGHQ
Trigger: TTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCACTCAGCTTGAGGGTTTaGTACAACATGGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPLSLRV*YNMGYR
Trigger: CCTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAG...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGCCAGCACTTCACTGTaGAGGCCACACATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLASTSL*RPHIPE
Trigger: TTCAGGAATGTGTGGCCTGCACAGTGAAGTGCTGGC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGGGAACTCTTCCCTCTaGGGGCCGATCACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSGNSSL*GPITPK
Trigger: CTTTGGAGTGATCGGCCCCCAGAGGGAAGAGTTCCC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGGGAACTCTTCCCTCTaGGGGCCGATCACTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEGNSSL*GPITPK
Trigger: CTTTGGAGTGATCGGCCCCCAGAGGGAAGAGTTCCC...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGATGATCTGACTGCCTaGGCCAGAGGGCTGATTAGA +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLDDLTA*ARGLIR
Trigger: TCTAATCAGCCCTCTGGCCCAGGCAGTCAGATCATC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGGGTTTGCTACAACATaGGCTACAGGCTTGTCACTC +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPGFATT*ATGLSL
Trigger: GAGTGACAAGCCTGTAGCCCATGTTGTAGCAAACCC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGATGGCACCACCAGCTaGTTATCTCTCAGCTCCACG +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLDGTTS*LSLSST
Trigger: CGTGGAGCTGAGAGATAACCAGCTGGTGGTGCCATC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCATGCGGCTGATGGTGTaGGTGAGGAGCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSMRLMV*VRSTWV
Trigger: CACCCATGTGCTCCTCACCCACACCATCAGCCGCAT...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCCCCCTCCCAGATAGATaGGCTCATACCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSPLPDR*AHTRAW
Trigger: CCAAGCCCTGGTATGAGCCCATCTATCTGGGAGGGG...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGGCGTTTGGGAAGGTTaGATGTTCGTCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLGVWEG*MFVLLT
Trigger: TGTGAGGAGGACGAACATCCAACCTTCCCAAACGCC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGGCGTTTGGGAAGGTTaGATGTTCGTCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPGVWEG*MFVLLT
Trigger: TGTGAGGAGGACGAACATCCAACCTTCCCAAACGCC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGGCAGGGGAGGCGTTTaGGAAGGTTGGATGTTCGTC +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSGRGGV*EGWMFV
Trigger: GACGAACATCCAACCTTCCCAAACGCCTCCCCTGCC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCAGGTTTCGAAGTGGTaGTCTTGTTGCTTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREQVSKW*SCCLKF
Trigger: GAACTTTAAGCAACAAGACCACCACTTCGAAACCTG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGGCCCCAGTGAGTTCTaGAGGCCCCAGTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIGPSEF*RPQFEF
Trigger: GAATTCAAACTGGGGCCTCCAGAACTCACTGGGGCC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGTCTCAAGGAAGTCTaGAAACATCTGGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSCLKEV*KHLERG
Trigger: TCCTCTCTCCAGATGTTTCCAGACTTCCTTGAGACA...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGATAAATAGAGGGAGCTaGCTCCATGGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLINRGS*LHGEGW
Trigger: CCAGCCCTCCCCATGGAGCCAGCTCCCTCTATTTAT...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGGCCAGGGGGCTACATaGGAACAGCCTATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIGQGAT*EQPIVQ
Trigger: CTGAACAATAGGCTGTTCCCATGTAGCCCCCTGGCC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGCAATGAGTGACAGTTaGTCACCAAATCAGCATTGT +
Preference number: 4 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREAMSDS*SPNQHC
Trigger: ACAATGCTGATTTGGTGACCAACTGTCACTCATTGC...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCCAGACACAACTCCCCTaGGGAGCAGAGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSQTQLP*GAEAQQ
Trigger: TTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTG...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGTGGCAGAGAGGAGGTTaGCCTTGGTCTGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEWQRGG*PWSGRR
Trigger: TCTCCTACCAGACCAAGGTCAACCTCCTCTCTGCCA...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCCTCCTCACAGGGCAATaGTCCCAAAGTAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSLLTGQ*SQSRPA
Trigger: GGCAGGTCTACTTTGGGATCATTGCCCTGTGAGGAG...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIQATHS*IPGFEV
Trigger: CACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTG...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGTGTCAATTTCTAGGTaGGGTCTTCTCAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPVSISR*GLLKSC
Trigger: GCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGCACGGAAAACATGTCTaGGCCAAGGCAGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLHGKHV*AKAAPT
Trigger: TGTAGGAGCTGCCTTGGCTCAGACATGTTTTCCGTG...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGCCGATCACTCCAAAGTaGAGCAGGCAGAAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEPITPK*SRQKSV
Trigger: CACGCTCTTCTGCCTGCTGCACTTTGGAGTGATCGG...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCCCGATCACTCCAAAGTaGAGCAGGCAGAAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSPITPK*SRQKSV
Trigger: CACGCTCTTCTGCCTGCTGCACTTTGGAGTGATCGG...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCTCAGCTTGAGGGTTTaGTACAACATGGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPLSLRV*YNMGYR
Trigger: CCTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAG...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGCCAGCACTTCACTGTaGAGGCCACACATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIASTSL*RPHIPE
Trigger: TTCAGGAATGTGTGGCCTGCACAGTGAAGTGCTGGC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGCTTGTCAGGGGATGTaGCGTCTGAGGGTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIACQGM*RLRVVF
Trigger: GAAAACAACCCTCAGACGCCACATCCCCTGACAAGC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGTGCTTTCAGTGCTCATaGTGTCCTTTCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLCFQCS*CPFQGR
Trigger: TCTCCCCTGGAAAGGACACCATGAGCACTGAAAGCA...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCTGCTTTCAGTGCTCATaGTGTCCTTTCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPCFQCS*CPFQGR
Trigger: TCTCCCCTGGAAAGGACACCATGAGCACTGAAAGCA...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGTTAGAGAGAGGTCCCTaGGGAACTCTTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSELERGP*GTLPSG
Trigger: CCCAGAGGGAAGAGTTCCCCAGGGACCTCTCTCTAA...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGATGATCTGACTGCCTaGGCCAGAGGGCTGATTAGA +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIDDLTA*ARGLIR
Trigger: TCTAATCAGCCCTCTGGCCCAGGCAGTCAGATCATC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGGCGTTTGGGAAGGTTaGATGTTCGTCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIGVWEG*MFVLLT
Trigger: TGTGAGGAGGACGAACATCCAACCTTCCCAAACGCC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCAGGTTTCGAAGTGGTaGTCTTGTTGCTTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQQVSKW*SCCLKF
Trigger: GAACTTTAAGCAACAAGACCACCACTTCGAAACCTG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGGCCCCAGTGAGTTCTaGAGGCCCCAGTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSGPSEF*RPQFEF
Trigger: GAATTCAAACTGGGGCCTCCAGAACTCACTGGGGCC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGAACCAAAGGCTCCCTaGTCTCCAGATTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLEPKAP*SPDSRC
Trigger: ACATCTGGAATCTGGAGACCAGGGAGCCTTTGGTTC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGAACCAAAGGCTCCCTaGTCTCCAGATTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPEPKAP*SPDSRC
Trigger: ACATCTGGAATCTGGAGACCAGGGAGCCTTTGGTTC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGATAAATAGAGGGAGCTaGCTCCATGGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEINRGS*LHGEGW
Trigger: CCAGCCCTCCCCATGGAGCCAGCTCCCTCTATTTAT...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCATAAATAGAGGGAGCTaGCTCCATGGGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSINRGS*LHGEGW
Trigger: CCAGCCCTCCCCATGGAGCCAGCTCCCTCTATTTAT...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGCAATGAGTGACAGTTaGTCACCAAATCAGCATTGT +
Preference number: 4 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQAMSDS*SPNQHC
Trigger: ACAATGCTGATTTGGTGACCAACTGTCACTCATTGC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGCAATGAGTGACAGTTaGTCACCAAATCAGCATTGT +
Preference number: 4 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSAMSDS*SPNQHC
Trigger: ACAATGCTGATTTGGTGACCAACTGTCACTCATTGC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCCAGGCCACACATTCCTaGATCCCAGGTTTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSQATHS*IPGFEV
Trigger: CACTTCGAAACCTGGGATTCAGGAATGTGTGGCCTG...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCCTGGAGGCCCCAGTTTaGATTCTTAGTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSLEAPV*ILSGCQ
Trigger: CTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAG...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGTGTCAATTTCTAGGTaGGGTCTTCTCAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPVSISR*GLLKSC
Trigger: GCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGTGTCAATTTCTAGGTaGGGTCTTCTCAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLVSISR*GLLKSC
Trigger: GCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGCACGGAAAACATGTCTaGGCCAAGGCAGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEHGKHV*AKAAPT
Trigger: TGTAGGAGCTGCCTTGGCTCAGACATGTTTTCCGTG...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGCAGAGGCTCAGCAATaGGTGACAGTTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSAEAQQ*VTVGHQ
Trigger: TTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACTTTATTTCTCGCCACTaGATAGTAGGGCGATTACAG +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYFISRH*IVGRLQ
Trigger: CTGTAATCGCCCTACTATTCAGTGGCGAGAAATAAA...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGCCACGTCCCGGATCATaGTTTCAGTGCTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEPRPGS*FQCSWC
Trigger: ACACCATGAGCACTGAAAGCATGATCCGGGACGTGG...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR GCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGCCAGCACTTCACTGTaGAGGCCACACATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEASTSL*RPHIPE
Trigger: TTCAGGAATGTGTGGCCTGCACAGTGAAGTGCTGGC...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGGGTTTGCTACAACATaGGCTACAGGCTTGTCACTC +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIGFATT*ATGLSL
Trigger: GAGTGACAAGCCTGTAGCCCATGTTGTAGCAAACCC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGGCGTTTGGGAAGGTTaGATGTTCGTCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEGVWEG*MFVLLT
Trigger: TGTGAGGAGGACGAACATCCAACCTTCCCAAACGCC...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGGCGTTTGGGAAGGTTaGATGTTCGTCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSGVWEG*MFVLLT
Trigger: TGTGAGGAGGACGAACATCCAACCTTCCCAAACGCC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCAGGTTTCGAAGTGGTaGTCTTGTTGCTTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYQVSKW*SCCLKF
Trigger: GAACTTTAAGCAACAAGACCACCACTTCGAAACCTG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCATCCCAGGTTTCGAAGTaGTGGTCTTGTTGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPSQVSK*WSCCLK
Trigger: CTTTAAGCAACAAGACCACCACTTCGAAACCTGGGA...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCATGTCTCAAGGAAGTCTaGAAACATCTGGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPCLKEV*KHLERG
Trigger: TCCTCTCTCCAGATGTTTCCAGACTTCCTTGAGACA...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGCAATGAGTGACAGTTaGTCACCAAATCAGCATTGT +
Preference number: 4 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYAMSDS*SPNQHC
Trigger: ACAATGCTGATTTGGTGACCAACTGTCACTCATTGC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGTGTCAATTTCTAGGTaGGGTCTTCTCAAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIVSISR*GLLKSC
Trigger: GCAGGACTTGAGAAGACCTCACCTAGAAATTGACAC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCATTTATTTCTCGCCACTaGATAGTAGGGCGATTACAG +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPFISRH*IVGRLQ
Trigger: CTGTAATCGCCCTACTATTCAGTGGCGAGAAATAAA...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCTGCTTTCAGTGCTCATaGTGTCCTTTCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSCFQCS*CPFQGR
Trigger: TCTCCCCTGGAAAGGACACCATGAGCACTGAAAGCA...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGTGCTTTCAGTGCTCATaGTGTCCTTTCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LHGNSLLFSSVFTENMSECFQCS*CPFQGR
Trigger: TCTCCCCTGGAAAGGACACCATGAGCACTGAAAGCA...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGGGTTTGCTACAACATaGGCTACAGGCTTGTCACTC +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSGFATT*ATGLSL
Trigger: GAGTGACAAGCCTGTAGCCCATGTTGTAGCAAACCC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCACAGGTTTCGAAGTGGTaGTCTTGTTGCTTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPQVSKW*SCCLKF
Trigger: GAACTTTAAGCAACAAGACCACCACTTCGAAACCTG...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGAACCAAAGGCTCCCTaGTCTCCAGATTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSEPKAP*SPDSRC
Trigger: ACATCTGGAATCTGGAGACCAGGGAGCCTTTGGTTC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCTGTCTCAAGGAAGTCTaGAAACATCTGGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPCLKEV*KHLERG
Trigger: TCCTCTCTCCAGATGTTTCCAGACTTCCTTGAGACA...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGCAATGAGTGACAGTTaGTCACCAAATCAGCATTGT +
Preference number: 4 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPAMSDS*SPNQHC
Trigger: ACAATGCTGATTTGGTGACCAACTGTCACTCATTGC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCTTTATTTCTCGCCACTaGATAGTAGGGCGATTACAG +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPFISRH*IVGRLQ
Trigger: CTGTAATCGCCCTACTATTCAGTGGCGAGAAATAAA...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGTTTATTTCTCGCCACTaGATAGTAGGGCGATTACAG +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLFISRH*IVGRLQ
Trigger: CTGTAATCGCCCTACTATTCAGTGGCGAGAAATAAA...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGCAGGTTTCGAAGTGGTaGTCTTGTTGCTTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLQVSKW*SCCLKF
Trigger: GAACTTTAAGCAACAAGACCACCACTTCGAAACCTG...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTTGTCTCAAGGAAGTCTaGAAACATCTGGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPICLKEV*KHLERG
Trigger: TCCTCTCTCCAGATGTTTCCAGACTTCCTTGAGACA...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGCAATGAGTGACAGTTaGTCACCAAATCAGCATTGT +
Preference number: 4 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPAMSDS*SPNQHC
Trigger: ACAATGCTGATTTGGTGACCAACTGTCACTCATTGC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGCAATGAGTGACAGTTaGTCACCAAATCAGCATTGT +
Preference number: 4 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLAMSDS*SPNQHC
Trigger: ACAATGCTGATTTGGTGACCAACTGTCACTCATTGC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGTTTATTTCTCGCCACTaGATAGTAGGGCGATTACAG +
Preference number: 4 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLFISRH*IVGRLQ
Trigger: CTGTAATCGCCCTACTATTCAGTGGCGAGAAATAAA...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCTGTCTCAAGGAAGTCTaGAAACATCTGGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSCLKEV*KHLERG
Trigger: TCCTCTCTCCAGATGTTTCCAGACTTCCTTGAGACA...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR TCA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCTTTATTTCTCGCCACTaGATAGTAGGGCGATTACAG +
Preference number: 4 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSFISRH*IVGRLQ
Trigger: CTGTAATCGCCCTACTATTCAGTGGCGAGAAATAAA...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS GCA 90 bp GGAGCGCCTCCTCGGCCAGCTCCACGTCCCGGATCATGCTTTCAGTaGTCATGGTGTCCTTTCCAGGGGAGAGAGGGTGGAGCCGTGGGT +
Preference number: 5 (lower is better)
Translates to: GAPPRPAPRPGSCFQ*SWCPFQGREGGAVG
Trigger: ACCCACGGCTCCACCCTCTCTCCCCTGGAAAGGACACCATGAGCACTGAAAGCATGATCCGGGACGTGGAGCTGGCCGAGGAGGCGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS CCA 90 bp CCAGCTGGTTATCTCTCAGCTCCACGCCATTGGCCAGGAGGGCATTaGCCCGGCGGTTCAGCCACTGGAGCTGCCCCTCAGCTTGAGGGT +
Preference number: 5 (lower is better)
Translates to: PAGYLSAPRHWPGGH*PGGSATGAAPQLEG
Trigger: ACCCTCAAGCTGAGGGGCAGCTCCAGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAGAGATAACCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS CCA 90 bp CCTCTGATGGCACCACCAGCTGGTTATCTCTCAGCTCCACGCCATTaGCCAGGAGGGCATTGGCCCGGCGGTTCAGCCACTGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PLMAPPAGYLSAPRH*PGGHWPGGSATGAA
Trigger: GGCAGCTCCAGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAGAGATAACCAGCTGGTGGTGCCATCAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS GCA 90 bp AGGTCCCTGGGGAACTCTTCCCTCTGGGGGCCGATCACTCCAAAGTaGAGCAGGCAGAAGAGCGTGGTGGCGCCTGCCACGATCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RSLGNSSLWGPITPK*SRQKSVVAPATIRK
Trigger: CTTCCTGATCGTGGCAGGCGCCACCACGCTCTTCTGCCTGCTGCACTTTGGAGTGATCGGCCCCCAGAGGGAAGAGTTCCCCAGGGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGTTGGCCAGGAGGGCATaGGCCCGGCGGTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: MGRAGLRVSRKSGNIWRELARRA*ARRFSH
Trigger: GTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAA...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGGCTCATACCAGGGCTaGGCCTCAGCCCCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREGSYQG*ASAPSG
Trigger: CCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGCC...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS GCA 90 bp TCTTCTTGGGGAGCGCCTCCTCGGCCAGCTCCACGTCCCGGATCATaGTTTCAGTGCTCATGGTGTCCTTTCCAGGGGAGAGAGGGTGGA +
Preference number: 5 (lower is better)
Translates to: SSWGAPPRPAPRPGS*FQCSWCPFQGREGG
Trigger: TCCACCCTCTCTCCCCTGGAAAGGACACCATGAGCACTGAAAGCATGATCCGGGACGTGGAGCTGGCCGAGGAGGCGCTCCCCAAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS GCA 90 bp GCCGATCACTCCAAAGTGCAGCAGGCAGAAGAGCGTGGTGGCGCCTaGCACGATCAGGAAGGAGAAGAGGCTGAGGAACAAGCACCGCCT +
Preference number: 5 (lower is better)
Translates to: ADHSKVQQAEERGGA*HDQEGEEAEEQAPP
Trigger: AGGCGGTGCTTGTTCCTCAGCCTCTTCTCCTTCCTGATCGTGGCAGGCGCCACCACGCTCTTCTGCCTGCTGCACTTTGGAGTGATCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGTTGGCCAGGAGGGCATaGGCCCGGCGGTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQLARRA*ARRFSH
Trigger: GTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAA...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTTGGCCAGGAGGGCATaGGCCCGGCGGTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSLARRA*ARRFSH
Trigger: GTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAA...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGGTGGAGGGGCAGCCTaGGCCCTTGAAGAGGACCTG +
Preference number: 5 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGGGGAA*ALEEDL
Trigger: CAGGTCCTCTTCAAGGGCCAAGGCTGCCCCTCCACC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCTCAGCTCCACGCCATaGGCCAGGAGGGCATTGGCC +
Preference number: 5 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQLSSTP*ARRALA
Trigger: GGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGGTGGAGGGGCAGCCTaGGCCCTTGAAGAGGACCTG +
Preference number: 5 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSGGGAA*ALEEDL
Trigger: CAGGTCCTCTTCAAGGGCCAAGGCTGCCCCTCCACC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGGCTCATACCAGGGCTaGGCCTCAGCCCCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYGSYQG*ASAPSG
Trigger: CCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGCC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCAACCTGCCTGGCAGCTaGTCAGGGGATGTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGNLPGS*SGDVAS
Trigger: AGACGCCACATCCCCTGACAAGCTGCCAGGCAGGTT...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGAACCTGCCTGGCAGCTaGTCAGGGGATGTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: MGRAGLRVSRKSGNIWRENLPGS*SGDVAS
Trigger: AGACGCCACATCCCCTGACAAGCTGCCAGGCAGGTT...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCTCAGCTCCACGCCATaGGCCAGGAGGGCATTGGCC +
Preference number: 5 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYLSSTP*ARRALA
Trigger: GGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGGCTCATACCAGGGCTaGGCCTCAGCCCCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPGSYQG*ASAPSG
Trigger: CCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGCC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGAAGGCAGCTCCTACATaGGGTCCCCCAGGATACCCC +
Preference number: 5 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREKAAPT*GPPGYP
Trigger: GGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS TCA 90 bp TTGGCCCTTGAAGAGGACCTGGGAGTAGATGAGGTACAGGCCCTCTaGTGGCACCACCAGCTGGTTATCTCTCAGCTCCACGCCATTGGC +
Preference number: 5 (lower is better)
Translates to: LALEEDLGVDEVQAL*WHHQLVISQLHAIG
Trigger: GCCAATGGCGTGGAGCTGAGAGATAACCAGCTGGTGGTGCCATCAGAGGGCCTGTACCTCATCTACTCCCAGGTCCTCTTCAAGGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCTTGGCCAGGAGGGCATaGGCCCGGCGGTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPLARRA*ARRFSH
Trigger: GTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAA...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGGTGGAGGGGCAGCCTaGGCCCTTGAAGAGGACCTG +
Preference number: 5 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPGGGAA*ALEEDL
Trigger: CAGGTCCTCTTCAAGGGCCAAGGCTGCCCCTCCACC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCACATGGGCTACAGGCTaGTCACTCGGGGTTCGAGAA +
Preference number: 5 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGTWATG*SLGVRE
Trigger: TTCTCGAACCCCGAGTGACAAGCCTGTAGCCCATGT...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGAGCTGCCCCTCAGCTaGAGGGTTTGCTACAACATG +
Preference number: 5 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREELPLS*RVCYNM
Trigger: CATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCTC...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGAGCTGCCCCTCAGCTaGAGGGTTTGCTACAACATG +
Preference number: 5 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGELPLS*RVCYNM
Trigger: CATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCTC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGTTGGCCAGGAGGGCATaGGCCCGGCGGTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLLARRA*ARRFSH
Trigger: GTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAA...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTTTGGCCAGGAGGGCATaGGCCCGGCGGTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPILARRA*ARRFSH
Trigger: GTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAA...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGGTGGAGGGGCAGCCTaGGCCCTTGAAGAGGACCTG +
Preference number: 5 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPGGGAA*ALEEDL
Trigger: CAGGTCCTCTTCAAGGGCCAAGGCTGCCCCTCCACC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGGCTCATACCAGGGCTaGGCCTCAGCCCCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLGSYQG*ASAPSG
Trigger: CCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGCC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCAGGCGTTTGGGAAGGTaGGATGTTCGTCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGRRLGR*DVRPPH
Trigger: GTGAGGAGGACGAACATCCAACCTTCCCAAACGCCT...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGGGCAGGGGAGGCGTTaGGGAAGGTTGGATGTTCGT +
Preference number: 5 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYGQGRR*GRLDVR
Trigger: ACGAACATCCAACCTTCCCAAACGCCTCCCCTGCCC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGTTGAGCCAGAAGAGGTaGAGGGTGTCTGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: MGRAGLRVSRKSGNIWRELSQKR*RVSEGG
Trigger: CCCTCCTTCAGACACCCTCAACCTCTTCTGGCTCAA...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGACATGGGCTACAGGCTaGTCACTCGGGGTTCGAGAA +
Preference number: 5 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQTWATG*SLGVRE
Trigger: TTCTCGAACCCCGAGTGACAAGCCTGTAGCCCATGT...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGCCTCAGCTTGAGGGTTaGCTACAACATGGGCTACAG +
Preference number: 5 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREPQLEG*LQHGLQ
Trigger: CTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAGG...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGAGCTGCCCCTCAGCTaGAGGGTTTGCTACAACATG +
Preference number: 5 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSELPLS*RVCYNM
Trigger: CATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCTC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGAGCTGCCCCTCAGCTaGAGGGTTTGCTACAACATG +
Preference number: 5 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQELPLS*RVCYNM
Trigger: CATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCTC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGCTCAGCTCCACGCCATaGGCCAGGAGGGCATTGGCC +
Preference number: 5 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLLSSTP*ARRALA
Trigger: GGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAG...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCAGCTCCACGCCATaGGCCAGGAGGGCATTGGCC +
Preference number: 5 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPILSSTP*ARRALA
Trigger: GGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAG...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGGTGGAGGGGCAGCCTaGGCCCTTGAAGAGGACCTG +
Preference number: 5 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLGGGAA*ALEEDL
Trigger: CAGGTCCTCTTCAAGGGCCAAGGCTGCCCCTCCACC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGGCTCATACCAGGGCTaGGCCTCAGCCCCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSGSYQG*ASAPSG
Trigger: CCCAGAGGGGGCTGAGGCCAAGCCCTGGTATGAGCC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAAAGGCAGCTCCTACATaGGGTCCCCCAGGATACCCC +
Preference number: 5 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPKAAPT*GPPGYP
Trigger: GGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS TCA 90 bp GGAGGCGTTTGGGAAGGTTGGATGTTCGTCCTCCTCACAGGGCAATaGTCCCAAAGTAGACCTGCCCAGACTCGGCAAAGTCGAGATAGT +
Preference number: 5 (lower is better)
Translates to: GGVWEGWMFVLLTGQ*SQSRPAQTRQSRDS
Trigger: ACTATCTCGACTTTGCCGAGTCTGGGCAGGTCTACTTTGGGATCATTGCCCTGTGAGGAGGACGAACATCCAACCTTCCCAAACGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACACATGGGCTACAGGCTaGTCACTCGGGGTTCGAGAA +
Preference number: 5 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYTWATG*SLGVRE
Trigger: TTCTCGAACCCCGAGTGACAAGCCTGTAGCCCATGT...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCCTCAGCTTGAGGGTTaGCTACAACATGGGCTACAG +
Preference number: 5 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQPQLEG*LQHGLQ
Trigger: CTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAGG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTCCTCAGCTTGAGGGTTaGCTACAACATGGGCTACAG +
Preference number: 5 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSPQLEG*LQHGLQ
Trigger: CTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAGG...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCCTCAGCTCCACGCCATaGGCCAGGAGGGCATTGGCC +
Preference number: 5 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSLSSTP*ARRALA
Trigger: GGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAG...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGGGCAGGGGAGGCGTTaGGGAAGGTTGGATGTTCGT +
Preference number: 5 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLGQGRR*GRLDVR
Trigger: ACGAACATCCAACCTTCCCAAACGCCTCCCCTGCCC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACTTGAGCCAGAAGAGGTaGAGGGTGTCTGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYLSQKR*RVSEGG
Trigger: CCCTCCTTCAGACACCCTCAACCTCTTCTGGCTCAA...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCCCCCCAATTCTCTTTTaGAGCCAGAAGAGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGPPILF*SQKRLR
Trigger: CCTCAACCTCTTCTGGCTCAAAAAGAGAATTGGGGG...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCAAGGCAGCTCCTACATaGGGTCCCCCAGGATACCCC +
Preference number: 5 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPKAAPT*GPPGYP
Trigger: GGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAACCTGCCTGGCAGCTaGTCAGGGGATGTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLNLPGS*SGDVAS
Trigger: AGACGCCACATCCCCTGACAAGCTGCCAGGCAGGTT...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTAACCTGCCTGGCAGCTaGTCAGGGGATGTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPINLPGS*SGDVAS
Trigger: AGACGCCACATCCCCTGACAAGCTGCCAGGCAGGTT...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCCTCAGCTTGAGGGTTaGCTACAACATGGGCTACAG +
Preference number: 5 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYPQLEG*LQHGLQ
Trigger: CTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAGG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGCATGGGAACAGCCTATaGTTCAGCTCCGTTTTCACG +
Preference number: 5 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQHGNSL*FSSVFT
Trigger: CGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATG...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCAACCTGCCTGGCAGCTaGTCAGGGGATGTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSNLPGS*SGDVAS
Trigger: AGACGCCACATCCCCTGACAAGCTGCCAGGCAGGTT...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGACATGGGCTACAGGCTaGTCACTCGGGGTTCGAGAA +
Preference number: 5 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLTWATG*SLGVRE
Trigger: TTCTCGAACCCCGAGTGACAAGCCTGTAGCCCATGT...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGGAGCTGCCCCTCAGCTaGAGGGTTTGCTACAACATG +
Preference number: 5 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLELPLS*RVCYNM
Trigger: CATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCTC...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCAGGCGTTTGGGAAGGTaGGATGTTCGTCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPRRLGR*DVRPPH
Trigger: GTGAGGAGGACGAACATCCAACCTTCCCAAACGCCT...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AGTGAGTTCTGGAGGCCCCAGTTTGAATTCTTAGTGGTTGCCAGCACTTCACTGAGGCGTTTGGGAAGGTaGGATGTTCGTCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: SEFWRPQFEFLVVASTSLRRLGR*DVRPPH
Trigger: GTGAGGAGGACGAACATCCAACCTTCCCAAACGCCT...CAGTGAAGTGCTGGCAACCACTAAGAATTCAAACTGGGGCCTCCAGAACTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGAAGGCAGCTCCTACATaGGGTCCCCCAGGATACCCC +
Preference number: 5 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEKAAPT*GPPGYP
Trigger: GGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACCATGGGAACAGCCTATaGTTCAGCTCCGTTTTCACG +
Preference number: 5 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYHGNSL*FSSVFT
Trigger: CGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATG...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTACATGGGCTACAGGCTaGTCACTCGGGGTTCGAGAA +
Preference number: 5 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPITWATG*SLGVRE
Trigger: TTCTCGAACCCCGAGTGACAAGCCTGTAGCCCATGT...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGACATGGGCTACAGGCTaGTCACTCGGGGTTCGAGAA +
Preference number: 5 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLTWATG*SLGVRE
Trigger: TTCTCGAACCCCGAGTGACAAGCCTGTAGCCCATGT...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGCGTTTGGGAAGGTaGGATGTTCGTCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLRRLGR*DVRPPH
Trigger: GTGAGGAGGACGAACATCCAACCTTCCCAAACGCCT...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTAGGCGTTTGGGAAGGTaGGATGTTCGTCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIRRLGR*DVRPPH
Trigger: GTGAGGAGGACGAACATCCAACCTTCCCAAACGCCT...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGTTGAGCCAGAAGAGGTaGAGGGTGTCTGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLLSQKR*RVSEGG
Trigger: CCCTCCTTCAGACACCCTCAACCTCTTCTGGCTCAA...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCACCCCCAATTCTCTTTTaGAGCCAGAAGAGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPPPILF*SQKRLR
Trigger: CCTCAACCTCTTCTGGCTCAAAAAGAGAATTGGGGG...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGACATGGGCTACAGGCTaGTCACTCGGGGTTCGAGAA +
Preference number: 5 (lower is better)
Translates to: LHGNSLLFSSVFTENMSETWATG*SLGVRE
Trigger: TTCTCGAACCCCGAGTGACAAGCCTGTAGCCCATGT...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCCTCAGCTTGAGGGTTaGCTACAACATGGGCTACAG +
Preference number: 5 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIPQLEG*LQHGLQ
Trigger: CTGTAGCCCATGTTGTAGCAAACCCTCAAGCTGAGG...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGGAGCTGCCCCTCAGCTaGAGGGTTTGCTACAACATG +
Preference number: 5 (lower is better)
Translates to: LHGNSLLFSSVFTENMSEELPLS*RVCYNM
Trigger: CATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCTC...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGAGCTGCCCCTCAGCTaGAGGGTTTGCTACAACATG +
Preference number: 5 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSELPLS*RVCYNM
Trigger: CATGTTGTAGCAAACCCTCAAGCTGAGGGGCAGCTC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCAGGCGTTTGGGAAGGTaGGATGTTCGTCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSRRLGR*DVRPPH
Trigger: GTGAGGAGGACGAACATCCAACCTTCCCAAACGCCT...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGAGAGGCGTTTGGGAAGGTaGGATGTTCGTCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: LHGNSLLFSSVFTENMSERRLGR*DVRPPH
Trigger: GTGAGGAGGACGAACATCCAACCTTCCCAAACGCCT...CTCAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGTTCGAAGTGGTGGTCTaGTTGCTTAAAGTTCTAAGC +
Preference number: 5 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQFEVVV*LLKVLS
Trigger: GCTTAGAACTTTAAGCAACAAGACCACCACTTCGAA...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCATGGGAACAGCCTATaGTTCAGCTCCGTTTTCACG +
Preference number: 5 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPHGNSL*FSSVFT
Trigger: CGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATG...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCAGGCCTAAGGTCCACTaGTGTCAATTTCTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPRPKVH*CQFLGE
Trigger: CTCACCTAGAAATTGACACAAGTGGACCTTAGGCCT...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGCATGGGAACAGCCTATaGTTCAGCTCCGTTTTCACG +
Preference number: 5 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLHGNSL*FSSVFT
Trigger: CGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATG...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp TCGCCACTGAATAGTAGGGCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCGTCACCAAATCAGCATaGTTTAGACAACTTAATCAG +
Preference number: 5 (lower is better)
Translates to: SPLNSRAITDTTPLGSRGVTKSA*FRQLNQ
Trigger: CTGATTAAGTTGTCTAAACAATGCTGATTTGGTGAC...GCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGCCCTACTATTCAGTGGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ATGGGGAGGGCTGGGCTCCGTGTCTCAAGGAAGTCTGGAAACATCTGGAGAGAGGTCACCAAATCAGCATaGTTTAGACAACTTAATCAG +
Preference number: 5 (lower is better)
Translates to: MGRAGLRVSRKSGNIWREVTKSA*FRQLNQ
Trigger: CTGATTAAGTTGTCTAAACAATGCTGATTTGGTGAC...CTCTCTCCAGATGTTTCCAGACTTCCTTGAGACACGGAGCCCAGCCCTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCCCCCCAATTCTCTTTTaGAGCCAGAAGAGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSPPILF*SQKRLR
Trigger: CCTCAACCTCTTCTGGCTCAAAAAGAGAATTGGGGG...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAGAAGTGGTGGTCTTGTaGCTTAAAGTTCTAAGCTTG +
Preference number: 5 (lower is better)
Translates to: VVVLLLKVLSLGSDPKPPEVVVL*LKVLSL
Trigger: CAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC...TGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTAGGCCTAAGGTCCACTaGTGTCAATTTCTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIRPKVH*CQFLGE
Trigger: CTCACCTAGAAATTGACACAAGTGGACCTTAGGCCT...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCCATGGGAACAGCCTATaGTTCAGCTCCGTTTTCACG +
Preference number: 5 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSHGNSL*FSSVFT
Trigger: CGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATG...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GCGATTACAGACACAACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTGTCACCAAATCAGCATaGTTTAGACAACTTAATCAG +
Preference number: 5 (lower is better)
Translates to: AITDTTPLGSRGSAMSDSVTKSA*FRQLNQ
Trigger: CTGATTAAGTTGTCTAAACAATGCTGATTTGGTGAC...ACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGTTGTGTCTGTAATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp ACTCCCCTGGGGAGCAGAGGCTCAGCAATGAGTGACAGTTGGTCACCAAATCAGGTCACCAAATCAGCATaGTTTAGACAACTTAATCAG +
Preference number: 5 (lower is better)
Translates to: TPLGSRGSAMSDSWSPNQVTKSA*FRQLNQ
Trigger: CTGATTAAGTTGTCTAAACAATGCTGATTTGGTGAC...CTGATTTGGTGACCAACTGTCACTCATTGCTGAGCCTCTGCTCCCCAGGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCTTCGAAGTGGTGGTCTaGTTGCTTAAAGTTCTAAGC +
Preference number: 5 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPFEVVV*LLKVLS
Trigger: GCTTAGAACTTTAAGCAACAAGACCACCACTTCGAA...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCAGGCCTAAGGTCCACTaGTGTCAATTTCTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSRPKVH*CQFLGE
Trigger: CTCACCTAGAAATTGACACAAGTGGACCTTAGGCCT...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp AAGGCAGCTCCTACATTGGGTCCCCCAGGATACCCCGGTCTCCCAAATAAATACGTCACCAAATCAGCATaGTTTAGACAACTTAATCAG +
Preference number: 5 (lower is better)
Translates to: KAAPTLGPPGYPGLPNKYVTKSA*FRQLNQ
Trigger: CTGATTAAGTTGTCTAAACAATGCTGATTTGGTGAC...GTATTTATTTGGGAGACCGGGGTATCCTGGGGGACCCAATGTAGGAGCTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGAAGTGGTGGTCTTGTaGCTTAAAGTTCTAAGCTTG +
Preference number: 5 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLEVVVL*LKVLSL
Trigger: CAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCGAAGTGGTGGTCTTGTaGCTTAAAGTTCTAAGCTTG +
Preference number: 5 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSEVVVL*LKVLSL
Trigger: CAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp CTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTCTCTTTTTGAGCTTCGAAGTGGTGGTCTaGTTGCTTAAAGTTCTAAGC +
Preference number: 5 (lower is better)
Translates to: LKVLSLGSDPKPPILFLSFEVVV*LLKVLS
Trigger: GCTTAGAACTTTAAGCAACAAGACCACCACTTCGAA...GCTCAAAAAGAGAATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GAAGTGGTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCGTCACCAAATCAGCATaGTTTAGACAACTTAATCAG +
Preference number: 5 (lower is better)
Translates to: EVVVLLLKVLSLGSDPKPVTKSA*FRQLNQ
Trigger: CTGATTAAGTTGTCTAAACAATGCTGATTTGGTGAC...GGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCACCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GTGGTCTTGTTGCTTAAAGTTCTAAGCTTGGGTTCCGACCCTAAGCCCCCAATTGTCACCAAATCAGCATaGTTTAGACAACTTAATCAG +
Preference number: 5 (lower is better)
Translates to: VVLLLKVLSLGSDPKPPIVTKSA*FRQLNQ
Trigger: CTGATTAAGTTGTCTAAACAATGCTGATTTGGTGAC...AATTGGGGGCTTAGGGTCGGAACCCAAGCTTAGAACTTTAAGCAACAAGACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS-3UTR CAA 90 bp GGCTACATGGGAACAGCCTATTGTTCAGCTCCGTTTTCACGGAAAACATGTCTGGTCACCAAATCAGCATaGTTTAGACAACTTAATCAG +
Preference number: 5 (lower is better)
Translates to: GYMGTAYCSAPFSRKTCLVTKSA*FRQLNQ
Trigger: CTGATTAAGTTGTCTAAACAATGCTGATTTGGTGAC...CAGACATGTTTTCCGTGAAAACGGAGCTGAACAATAGGCTGTTCCCATGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS CCA 72 bp TATCTCTCAGCTCCACGCCATTGGCCAGGAGGGCATTaGCCCGGCGGTTCAGCCACTGGAGCTGCCCCTCAG +
Preference number: 6 (lower is better)
Translates to: YLSAPRHWPGGH*PGGSATGAAPQ
Trigger: CTGAGGGGCAGCTCCAGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAGAGATA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS CAA 72 bp GGCACCACCAGCTGGTTATCTCTCAGCTCCACGCCATaGGCCAGGAGGGCATTGGCCCGGCGGTTCAGCCAC +
Preference number: 6 (lower is better)
Translates to: GTTSWLSLSSTP*ARRALARRFSH
Trigger: GTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAGAGATAACCAGCTGGTGGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS CAA 90 bp CCCTCTGATGGCACCACCAGCTGGTTATCTCTCAGCTCCACGCCATaGGCCAGGAGGGCATTGGCCCGGCGGTTCAGCCACTGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: PSDGTTSWLSLSSTP*ARRALARRFSHWSC
Trigger: GCAGCTCCAGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAGAGATAACCAGCTGGTGGTGCCATCAGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS CCA 72 bp GCACCACCAGCTGGTTATCTCTCAGCTCCACGCCATTaGCCAGGAGGGCATTGGCCCGGCGGTTCAGCCACT +
Preference number: 6 (lower is better)
Translates to: APPAGYLSAPRH*PGGHWPGGSAT
Trigger: AGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAGAGATAACCAGCTGGTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS CAA 72 bp TTATCTCTCAGCTCCACGCCATTGGCCAGGAGGGCATaGGCCCGGCGGTTCAGCCACTGGAGCTGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: LSLSSTPLARRA*ARRFSHWSCPS
Trigger: TGAGGGGCAGCTCCAGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAATGGCGTGGAGCTGAGAGATAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS GCA 72 bp GGAGCGCCTCCTCGGCCAGCTCCACGTCCCGGATCATaGTTTCAGTGCTCATGGTGTCCTTTCCAGGGGAGA +
Preference number: 6 (lower is better)
Translates to: GAPPRPAPRPGS*FQCSWCPFQGR
Trigger: TCTCCCCTGGAAAGGACACCATGAGCACTGAAAGCATGATCCGGGACGTGGAGCTGGCCGAGGAGGCGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS GCA 72 bp CCTCGGCCAGCTCCACGTCCCGGATCATGCTTTCAGTaGTCATGGTGTCCTTTCCAGGGGAGAGAGGGTGGA +
Preference number: 6 (lower is better)
Translates to: PRPAPRPGSCFQ*SWCPFQGREGG
Trigger: TCCACCCTCTCTCCCCTGGAAAGGACACCATGAGCACTGAAAGCATGATCCGGGACGTGGAGCTGGCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000448781.2
ENST00000449264.3
CDS TCA 72 bp GAAGAGGACCTGGGAGTAGATGAGGTACAGGCCCTCTaGTGGCACCACCAGCTGGTTATCTCTCAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: EEDLGVDEVQAL*WHHQLVISQLH
Trigger: GTGGAGCTGAGAGATAACCAGCTGGTGGTGCCATCAGAGGGCCTGTACCTCATCTACTCCCAGGTCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3
CDS TCA 72 bp TGGGAAGGTTGGATGTTCGTCCTCCTCACAGGGCAATaGTCCCAAAGTAGACCTGCCCAGACTCGGCAAAGT +
Preference number: 6 (lower is better)
Translates to: WEGWMFVLLTGQ*SQSRPAQTRQS
Trigger: ACTTTGCCGAGTCTGGGCAGGTCTACTTTGGGATCATTGCCCTGTGAGGAGGACGAACATCCAACCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376122.3
ENST00000383496.4
ENST00000412275.2
ENST00000420425.2
ENST00000443707.2
ENST00000445232.2
ENST00000448781.2
ENST00000449264.3