Pregenerated sensors for TMX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000139921Ensembl transcript IDs: ENST00000457354.7, ENST00000555574.1, ENST00000556683.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCTAGAGATCAGATTTTACAATACTTCAGTAGTACAGCTGAATTaGTTATGGTGGGTAGGTGGCCCAGAATTCTCCAGGATATTACTT | + |
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Preference number: 1 (lower is better) Translates to: PLEIRFYNTSVVQLN*LWWVGGPEFSRILL Trigger: AAGTAATATCCTGGAGAATTCTGGGCCACCTACCCACCATAATCAATTCAGCTGTACTACTGAAGTATTGTAAAATCTGATCTCTAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| 3UTR CCA 90 bp | TTACAATACTTCAGTAGTACAGCTGAATTGATTATGGTGGGTAGGTaGCCCAGAATTCTCCAGGATATTACTTTTACTATACCTTATTCT | + |
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Preference number: 1 (lower is better) Translates to: LQYFSSTAELIMVGR*PRILQDITFTIPYS Trigger: AGAATAAGGTATAGTAAAAGTAATATCCTGGAGAATTCTGGGCCACCTACCCACCATAATCAATTCAGCTGTACTACTGAAGTATTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| 3UTR CAA 90 bp | TCCTCTAGAGATCAGATTTTACAATACTTCAGTAGTACAGCTGAATaGATTATGGTGGGTAGGTGGCCCAGAATTCTCCAGGATATTACT | + |
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Preference number: 2 (lower is better) Translates to: SSRDQILQYFSSTAE*IMVGRWPRILQDIT Trigger: AGTAATATCCTGGAGAATTCTGGGCCACCTACCCACCATAATCAATTCAGCTGTACTACTGAAGTATTGTAAAATCTGATCTCTAGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| 3UTR-3UTR TCA 90 bp | AGCAACCAGAAATCATACTGGTCTTCAGCTTTAATGAAGTGGTTAGAAAGGTTTAATGTTCCATCCTACTaGCTTTTACCTGTGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: SNQKSYWSSALMKWLERFNVPSY*LLPVKS Trigger: GGATTTCACAGGTAAAAGTCAGTAGGATGGAACATT...AAACCTTTCTAACCACTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| 3UTR GCA 72 bp | CACACCTCTGGGCTGACTCACCTGAAAGATGTGCAATaGTTACCTGTCTTGCAGTTGTCATTAGGACTAAAT | + |
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Preference number: 3 (lower is better) Translates to: HTSGLTHLKDVQ*LPVLQLSLGLN Trigger: ATTTAGTCCTAATGACAACTGCAAGACAGGTAAGCATTGCACATCTTTCAGGTGAGTCAGCCCAGAGGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| 3UTR-3UTR CAA 90 bp | CTGACTCACCTGAAAGATGTGCAATGCTTACCTGTCTTGCAGTTGTCATTAGGAAGTAGTACAGCTGAATaGATTATGGTGGGTAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LTHLKDVQCLPVLQLSLGSSTAE*IMVGRW Trigger: CCACCTACCCACCATAATCAATTCAGCTGTACTACT...TCCTAATGACAACTGCAAGACAGGTAAGCATTGCACATCTTTCAGGTGAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| 3UTR CCA 72 bp | TTCAGTAGTACAGCTGAATTGATTATGGTGGGTAGGTaGCCCAGAATTCTCCAGGATATTACTTTTACTATA | + |
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Preference number: 3 (lower is better) Translates to: FSSTAELIMVGR*PRILQDITFTI Trigger: TATAGTAAAAGTAATATCCTGGAGAATTCTGGGCCACCTACCCACCATAATCAATTCAGCTGTACTACTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS-3UTR GCA 90 bp | GATCCAAGCCAGAGGCCTACTACTTCTGATTACACTATAATGCATCCTTCTCCACGCCATTTCGCCGCTTaGCCACCTCACAGGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: DPSQRPTTSDYTIMHPSPRHFAA*PPHRER Trigger: GCGCTCCCTGTGAGGTGGGCAAGCGGCGAAATGGCG...TGGAGAAGGATGCATTATAGTGTAATCAGAAGTAGTAGGCCTCTGGCTTGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556683.1 |
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| CDS-3UTR TCA 90 bp | GATCCAAGCCAGAGGCCTACTACTTCTGATTACACTATAATGCATCCTTCTCCATCAGCTCTTCCAGCATaGTCCAAGCCAGAGGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: DPSQRPTTSDYTIMHPSPSALPA*SKPEAY Trigger: GTAGGCCTCTGGCTTGGATCATGCTGGAAGAGCTGA...TGGAGAAGGATGCATTATAGTGTAATCAGAAGTAGTAGGCCTCTGGCTTGGATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556683.1 |
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| CDS-3UTR GCA 90 bp | AGCAACCAGAAATCATACTGGTCTTCAGCTTTAATGAAGTGGTTAGAAAGGTTTCGCCATTTCGCCGCTTaGCCACCTCACAGGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: SNQKSYWSSALMKWLERFRHFAA*PPHRER Trigger: GCGCTCCCTGTGAGGTGGGCAAGCGGCGAAATGGCG...AAACCTTTCTAACCACTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS-3UTR TCA 90 bp | AGCAACCAGAAATCATACTGGTCTTCAGCTTTAATGAAGTGGTTAGAAAGGTTTGGCAGAAGAACTGCTTaGACCCAGGAGGTGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SNQKSYWSSALMKWLERFGRRTA*TQEVEV Trigger: AACCTCCACCTCCTGGGTTCAAGCAGTTCTTCTGCC...AAACCTTTCTAACCACTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS-3UTR TCA 90 bp | CTGACTCACCTGAAAGATGTGCAATGCTTACCTGTCTTGCAGTTGTCATTAGGACTCAGATGTCTACAGTaGCAATCTTTAAGAACCGTG | + |
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Preference number: 4 (lower is better) Translates to: LTHLKDVQCLPVLQLSLGLRCLQ*QSLRTV Trigger: CACGGTTCTTAAAGATTGTCACTGTAGACATCTGAG...TCCTAATGACAACTGCAAGACAGGTAAGCATTGCACATCTTTCAGGTGAGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS-3UTR TCA 90 bp | AGCATACCTTCAAAAAGCAACCAGAAATCATACTGGTCTTCAGCTTTAATGAAGAGGTGGAGGTTGCAGTaGGCCAAGATCATGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: SIPSKSNQKSYWSSALMKRWRLQ*AKIMPL Trigger: CAATGGCATGATCTTGGCTCACTGCAACCTCCACCT...CTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTTGCTTTTTGAAGGTATGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS-3UTR TCA 90 bp | GATCCAAGCCAGAGGCCTACTACTTCTGATTACACTATAATGCATCCTTCTCCAGAGGCCTACTACTTCTaGTTACACTATAATGCATCC | + |
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Preference number: 4 (lower is better) Translates to: DPSQRPTTSDYTIMHPSPEAYYF*LHYNAS Trigger: GGATGCATTATAGTGTAATCAGAAGTAGTAGGCCTC...TGGAGAAGGATGCATTATAGTGTAATCAGAAGTAGTAGGCCTCTGGCTTGGATC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556683.1 |
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| 3UTR CAA 72 bp | GATCAGATTTTACAATACTTCAGTAGTACAGCTGAATaGATTATGGTGGGTAGGTGGCCCAGAATTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: DQILQYFSSTAE*IMVGRWPRILQ Trigger: CTGGAGAATTCTGGGCCACCTACCCACCATAATCAATTCAGCTGTACTACTGAAGTATTGTAAAATCTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS-3UTR TCA 90 bp | AGCATACCTTCAAAAAGCAACCAGAAATCATACTGGTCTTCAGCTTTAATGAAGGTAGTACAGCTGAATTaGTTATGGTGGGTAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SIPSKSNQKSYWSSALMKVVQLN*LWWVGG Trigger: GCCACCTACCCACCATAATCAATTCAGCTGTACTAC...CTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTTGCTTTTTGAAGGTATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS-3UTR CCA 90 bp | AGCATACCTTCAAAAAGCAACCAGAAATCATACTGGTCTTCAGCTTTAATGAAGATTATGGTGGGTAGGTaGCCCAGAATTCTCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SIPSKSNQKSYWSSALMKIMVGR*PRILQD Trigger: ATCCTGGAGAATTCTGGGCCACCTACCCACCATAAT...CTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTTGCTTTTTGAAGGTATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS-3UTR CCA 90 bp | AGCAACCAGAAATCATACTGGTCTTCAGCTTTAATGAAGTGGTTAGAAAGGTTTTTTGTACCACACCTCTaGGCTGACTCACCTGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SNQKSYWSSALMKWLERFFVPHL*ADSPER Trigger: TCTTTCAGGTGAGTCAGCCCAGAGGTGTGGTACAAA...AAACCTTTCTAACCACTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTTGCT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS-3UTR TCA 90 bp | AGCATACCTTCAAAAAGCAACCAGAAATCATACTGGTCTTCAGCTTTAATGAAGAATGTTCCATCCTACTaGCTTTTACCTGTGAAATCC | + |
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Preference number: 4 (lower is better) Translates to: SIPSKSNQKSYWSSALMKNVPSY*LLPVKS Trigger: GGATTTCACAGGTAAAAGTCAGTAGGATGGAACATT...CTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTTGCTTTTTGAAGGTATGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS-3UTR CCA 90 bp | AGCAACCAGAAATCATACTGGTCTTCAGCTTTAATGAAGTGGTTAGAAAGGTTTAACCAGAAATCATACTaGTCTTCAGCTTTAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: SNQKSYWSSALMKWLERFNQKSY*SSALMK Trigger: CTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTT...AAACCTTTCTAACCACTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTTGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS GCA 90 bp | CTCACAGGGAGCGCGGTCGCAGCTCCCACTTCCGCCCTCGCGGGCTaGTCAGCGCAAGCGCACTACGGTGCTGCGAGGAGCGCCTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: LTGSAVAAPTSALAG*SAQAHYGAARSACL Trigger: TAGACAGGCGCTCCTCGCAGCACCGTAGTGCGCTTGCGCTGAGCAGCCCGCGAGGGCGGAAGTGGGAGCTGCGACCGCGCTCCCTGTGAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555574.1 |
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| CDS GCA 90 bp | TCCCACTTCCGCCCTCGCGGGCTGCTCAGCGCAAGCGCACTACGGTaGTGCGAGGAGCGCCTGTCTAGAGGACTCTCAATGCGCATGACA | + |
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Preference number: 5 (lower is better) Translates to: SHFRPRGLLSASALR*CEERLSRGLSMRMT Trigger: TGTCATGCGCATTGAGAGTCCTCTAGACAGGCGCTCCTCGCAGCACCGTAGTGCGCTTGCGCTGAGCAGCCCGCGAGGGCGGAAGTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555574.1 |
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| CDS-3UTR CAA 90 bp | GATCCAAGCCAGAGGCCTACTACTTCTGATTACACTATAATGCATCCTTCTCCAGTGATGACGCGAACGTaGCTCCGCCGCCCGTGCGTC | + |
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Preference number: 5 (lower is better) Translates to: DPSQRPTTSDYTIMHPSPVMTRT*LRRPCV Trigger: GACGCACGGGCGGCGGAGCAACGTTCGCGTCATCAC...TGGAGAAGGATGCATTATAGTGTAATCAGAAGTAGTAGGCCTCTGGCTTGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556683.1 |
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| CDS-3UTR CAA 90 bp | AGCATACCTTCAAAAAGCAACCAGAAATCATACTGGTCTTCAGCTTTAATGAAGGTGATGACGCGAACGTaGCTCCGCCGCCCGTGCGTC | + |
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Preference number: 5 (lower is better) Translates to: SIPSKSNQKSYWSSALMKVMTRT*LRRPCV Trigger: GACGCACGGGCGGCGGAGCAACGTTCGCGTCATCAC...CTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTTGCTTTTTGAAGGTATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS-3UTR CAA 90 bp | CTGACTCACCTGAAAGATGTGCAATGCTTACCTGTCTTGCAGTTGTCATTAGGACAATGCTTACCTGTCTaGCAGTTGTCATTAGGACTA | + |
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Preference number: 5 (lower is better) Translates to: LTHLKDVQCLPVLQLSLGQCLPV*QLSLGL Trigger: TAGTCCTAATGACAACTGCAAGACAGGTAAGCATTG...TCCTAATGACAACTGCAAGACAGGTAAGCATTGCACATCTTTCAGGTGAGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS TCA 90 bp | CTACAGGACTCACCACTACTTTGGATGCATAATGACTTAACACGCTaGACAGGATCACACCATTTCACAAGAACATCACTTTCCAAAACA | + |
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Preference number: 5 (lower is better) Translates to: LQDSPLLWMHNDLTR*TGSHHFTRTSLSKT Trigger: TGTTTTGGAAAGTGATGTTCTTGTGAAATGGTGTGATCCTGTTCAGCGTGTTAAGTCATTATGCATCCAAAGTAGTGGTGAGTCCTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555574.1 |
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| CDS-3UTR CAA 90 bp | AGCATACCTTCAAAAAGCAACCAGAAATCATACTGGTCTTCAGCTTTAATGAAGGAACTCTACCTTAAATaGACCATGGGGATGAACTAC | + |
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Preference number: 5 (lower is better) Translates to: SIPSKSNQKSYWSSALMKELYLK*TMGMNY Trigger: GTAGTTCATCCCCATGGTCAATTTAAGGTAGAGTTC...CTTCATTAAAGCTGAAGACCAGTATGATTTCTGGTTGCTTTTTGAAGGTATGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457354.7 |
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| CDS TCA 90 bp | CACCATTTCACAAGAACATCACTTTCCAAAACAACTGTAAATCTTTaGGAACAGAGACTGTTTCACACATCACTCAACTACCTAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: HHFTRTSLSKTTVNL*EQRLFHTSLNYLKA Trigger: TGCCTTTAGGTAGTTGAGTGATGTGTGAAACAGTCTCTGTTCTCAAAGATTTACAGTTGTTTTGGAAAGTGATGTTCTTGTGAAATGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555574.1 |
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| CDS GCA 72 bp | AGCGCGGTCGCAGCTCCCACTTCCGCCCTCGCGGGCTaGTCAGCGCAAGCGCACTACGGTGCTGCGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SAVAAPTSALAG*SAQAHYGAARS Trigger: GCTCCTCGCAGCACCGTAGTGCGCTTGCGCTGAGCAGCCCGCGAGGGCGGAAGTGGGAGCTGCGACCGCGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555574.1 |
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| CDS GCA 72 bp | CCTCGCGGGCTGCTCAGCGCAAGCGCACTACGGTGCTaGGAGGAGCGCCTGTCTAGAGGACTCTCAATGCGC | + |
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Preference number: 6 (lower is better) Translates to: PRGLLSASALRC*EERLSRGLSMR Trigger: GCGCATTGAGAGTCCTCTAGACAGGCGCTCCTCGCAGCACCGTAGTGCGCTTGCGCTGAGCAGCCCGCGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555574.1 |
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| CDS GCA 72 bp | CGCCCTCGCGGGCTGCTCAGCGCAAGCGCACTACGGTaGTGCGAGGAGCGCCTGTCTAGAGGACTCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: RPRGLLSASALR*CEERLSRGLSM Trigger: CATTGAGAGTCCTCTAGACAGGCGCTCCTCGCAGCACCGTAGTGCGCTTGCGCTGAGCAGCCCGCGAGGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555574.1 |
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| CDS TCA 72 bp | TCACCACTACTTTGGATGCATAATGACTTAACACGCTaGACAGGATCACACCATTTCACAAGAACATCACTT | + |
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Preference number: 6 (lower is better) Translates to: SPLLWMHNDLTR*TGSHHFTRTSL Trigger: AAGTGATGTTCTTGTGAAATGGTGTGATCCTGTTCAGCGTGTTAAGTCATTATGCATCCAAAGTAGTGGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555574.1 |
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