RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMTC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000179104

Ensembl transcript IDs: ENST00000321196.8, ENST00000546590.2, ENST00000548305.5, ENST00000549919.1, ENST00000551915.5

Found 564 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGGGCCCGCAGGTAGTTGGCCTCGGCCTTCTGGAGTCTGCCATTaGGGTGCAGAATGGCTCCCAGGTTCATCAAAGCAGCCGGATAAT +
Preference number: 1 (lower is better)
Translates to: AGPAGSWPRPSGVCH*GAEWLPGSSKQPDN
Trigger: ATTATCCGGCTGCTTTGATGAACCTGGGAGCCATTCTGCACCTCAATGGCAGACTCCAGAAGGCCGAGGCCAACTACCTGCGGGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 90 bp GATGTTCCACAGTTTGCGGAGATTGGACTGTGTGATGACATCGTCTaGCTTGAGCTGCAGGGCCCGCAGGTAGTTGGCCTCGGCCTTCTG +
Preference number: 1 (lower is better)
Translates to: DVPQFAEIGLCDDIV*LELQGPQVVGLGLL
Trigger: CAGAAGGCCGAGGCCAACTACCTGCGGGCCCTGCAGCTCAAGCCAGACGATGTCATCACACAGTCCAATCTCCGCAAACTGTGGAACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 90 bp CCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTaGATTCTTCCAGAAGCGGTAGTGACCTCAATGACCTCTGCCCTG +
Preference number: 1 (lower is better)
Translates to: PAFPFLVLTAVPTAK*ILPEAVVTSMTSAL
Trigger: CAGGGCAGAGGTCATTGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR GCA 90 bp GCAGGGATGTGGTCAGTCTTGGATCTCAGTGATTCCATATACCAATaGTCTGCTTCGGGGAGTTTGCTTAAACGCATATATGCTTCACCC +
Preference number: 1 (lower is better)
Translates to: AGMWSVLDLSDSIYQ*SASGSLLKRIYASP
Trigger: GGGTGAAGCATATATGCGTTTAAGCAAACTCCCCGAAGCAGAGCATTGGTATATGGAATCACTGAGATCCAAGACTGACCACATCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 90 bp TGCTTCACCCATCATGTTGTACAAGCTCTGTGGGGCAAACTGCCTTaGCATTTTCTGAATTGCTTCCTTGTATACACTAAGGGCTTCCTC +
Preference number: 1 (lower is better)
Translates to: CFTHHVVQALWGKLP*HFLNCFLVYTKGFL
Trigger: GAGGAAGCCCTTAGTGTATACAAGGAAGCAATTCAGAAAATGCCAAGGCAGTTTGCCCCACAGAGCTTGTACAACATGATGGGTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR GCA 90 bp GGTACTCCACATCTGAAAGGCAGCTATGTCCATTTGCATTCTGCTTaGCATTTGTTACAGTTTTCCCATTGCATTCTCTGTCTACGCTCG +
Preference number: 1 (lower is better)
Translates to: GTPHLKGSYVHLHSA*HLLQFSHCILCLRS
Trigger: CGAGCGTAGACAGAGAATGCAATGGGAAAACTGTAACAAATGGCAAGCAGAATGCAAATGGACATAGCTGCCTTTCAGATGTGGAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR GCA 90 bp CGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATaGCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAAC +
Preference number: 1 (lower is better)
Translates to: RVYHSLVTLNPNCLP*LNGHSDFLSQCLRN
Trigger: GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR GCA 90 bp TCTCCTGGAGAAGTAGCCCTAAATTATAAAGCATGTCAGCCATGTTaGTGCGGTAGTACAAAGCATTTCTATAGGCGCTTTCAGCTTCAG +
Preference number: 1 (lower is better)
Translates to: SPGEVALNYKACQPC*CGSTKHFYRRFQLQ
Trigger: CTGAAGCTGAAAGCGCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAATTTAGGGCTACTTCTCCAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 90 bp CCATTTTCTACTTTGGATGCAAAGCTGGACTTAGTCTCTGAGTTCTaGTACTCCACATCTGAAAGGCAGCTATGTCCATTTGCATTCTGC +
Preference number: 1 (lower is better)
Translates to: PFSTLDAKLDLVSEF*YSTSERQLCPFAFC
Trigger: GCAGAATGCAAATGGACATAGCTGCCTTTCAGATGTGGAGTACCAGAACTCAGAGACTAAGTCCAGCTTTGCATCCAAAGTAGAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR TCA 90 bp TTTCCTAGGTTGTACAAACAACTGGTAACAGAGCTCTTGTGTGCATaGGGGTCCTTTAGGTTTTCATCTGGGATCTCCGAACACTTTAAG +
Preference number: 1 (lower is better)
Translates to: FPRLYKQLVTELLCA*GSFRFSSGISEHFK
Trigger: CTTAAAGTGTTCGGAGATCCCAGATGAAAACCTAAAGGACCCTCATGCACACAAGAGCTCTGTTACCAGTTGTTTGTACAACCTAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR GCA 90 bp CAGGCCCAATTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTaGCTCAACTGTGCATTCAGTGAACCTATTAAGAACCACATCTTT +
Preference number: 1 (lower is better)
Translates to: QAQLLTLLGNWCHKK*LNCAFSEPIKNHIF
Trigger: AAAGATGTGGTTCTTAATAGGTTCACTGAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAATTGGGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
3UTR GCA 90 bp TTCTGGTACTCCACATCTGAAAGGCAGCTATGTCCATTTGCATTCTaGTTGCCATTTGTTACAGTTTTCCCATTGCATTCTCTGTCTACG +
Preference number: 1 (lower is better)
Translates to: FWYSTSERQLCPFAF*LPFVTVFPLHSLST
Trigger: CGTAGACAGAGAATGCAATGGGAAAACTGTAACAAATGGCAAGCAGAATGCAAATGGACATAGCTGCCTTTCAGATGTGGAGTACCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR GCA 90 bp CCTGGAGAAGTAGCCCTAAATTATAAAGCATGTCAGCCATGTTGCTaGGGTAGTACAAAGCATTTCTATAGGCGCTTTCAGCTTCAGAAA +
Preference number: 1 (lower is better)
Translates to: PGEVALNYKACQPCC*GSTKHFYRRFQLQK
Trigger: TTTCTGAAGCTGAAAGCGCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAATTTAGGGCTACTTCTCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR GCA 90 bp TGGATCTCAGTGATTCCATATACCAATGCTCTGCTTCGGGGAGTTTaGTTAAACGCATATATGCTTCACCCATCATGTTGTACAAGCTCT +
Preference number: 1 (lower is better)
Translates to: WISVIPYTNALLRGV*LNAYMLHPSCCTSS
Trigger: AGAGCTTGTACAACATGATGGGTGAAGCATATATGCGTTTAAGCAAACTCCCCGAAGCAGAGCATTGGTATATGGAATCACTGAGATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 90 bp TCCGAACACTTTAAGAATGTCCGTCGGGCTTCTTCCGTCCTTCCTTaGTTCATTAGAATAATACCGGTATTTAAATATGCAGAAGCCAGG +
Preference number: 1 (lower is better)
Translates to: SEHFKNVRRASSVLP*FIRIIPVFKYAEAR
Trigger: CCTGGCTTCTGCATATTTAAATACCGGTATTATTCTAATGAACCAAGGAAGGACGGAAGAAGCCCGACGGACATTCTTAAAGTGTTCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR TCA 90 bp ATTTCCAAGGTTACCCCATGCTTTAGCTGGGTTTACTTTTATCCCTaGTCTATAAAGCATTTCCTCATTCTGCCAGTCTCCATTCCTGAT +
Preference number: 1 (lower is better)
Translates to: ISKVTPCFSWVYFYP*SIKHFLILPVSIPD
Trigger: ATCAGGAATGGAGACTGGCAGAATGAGGAAATGCTTTATAGATCAGGGATAAAAGTAAACCCAGCTAAAGCATGGGGTAACCTTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR GCA 90 bp TGCTCCCAATGGCCAATTTATAATAATGTAGTGCTTCTGCAAACCTaGTGTTCTCCTGGAGAAGTAGCCCTAAATTATAAAGCATGTCAG +
Preference number: 1 (lower is better)
Translates to: CSQWPIYNNVVLLQT*CSPGEVALNYKACQ
Trigger: CTGACATGCTTTATAATTTAGGGCTACTTCTCCAGGAGAACAGCAGGTTTGCAGAAGCACTACATTATTATAAATTGGCCATTGGGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 90 bp AACAAAGATAAAGACAGAACAACAATGTTCTCCGTAGAAGGAAGCTaGGTTCTCTGTGATACATCGTTTTTAATGCCATTTTCTACTTTG +
Preference number: 1 (lower is better)
Translates to: NKDKDRTTMFSVEGS*VLCDTSFLMPFSTL
Trigger: CAAAGTAGAAAATGGCATTAAAAACGATGTATCACAGAGAACCCAGCTTCCTTCTACGGAGAACATTGTTGTTCTGTCTTTATCTTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CAA 90 bp GTGCGGGTGAGGAGGCTGTCCGAATCAGCAGCGGGGTTGTCCGAGTaGGAAAAGCTTGGTGGTTTGTTTCCCATCCAGTATAACCGGGCA +
Preference number: 2 (lower is better)
Translates to: VRVRRLSESAAGLSE*EKLGGLFPIQYNRA
Trigger: TGCCCGGTTATACTGGATGGGAAACAAACCACCAAGCTTTTCCAACTCGGACAACCCCGCTGCTGATTCGGACAGCCTCCTCACCCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR GCA 90 bp CAGGGCCCGCAGGTAGTTGGCCTCGGCCTTCTGGAGTCTGCCATTGAGGTGCAGCAACATCAAACTCTGTaGTGTCTAGTTCAGCTGCTT +
Preference number: 2 (lower is better)
Translates to: QGPQVVGLGLLESAIEVQQHQTL*CLVQLL
Trigger: AAGCAGCTGAACTAGACAGCACAGAGTTTGATGTTG...CTGCACCTCAATGGCAGACTCCAGAAGGCCGAGGCCAACTACCTGCGGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CAA 90 bp AAGGTGAGAGTGCGGGTGAGGAGGCTGTCCGAATCAGCAGCGGGGTaGTCCGAGTTGGAAAAGCTTGGTGGTTTGTTTCCCATCCAGTAT +
Preference number: 2 (lower is better)
Translates to: KVRVRVRRLSESAAG*SELEKLGGLFPIQY
Trigger: ATACTGGATGGGAAACAAACCACCAAGCTTTTCCAACTCGGACAACCCCGCTGCTGATTCGGACAGCCTCCTCACCCGCACTCTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCCGGGGTTGTCCGAGTTaGAAAAGCTTGGTGGTTTGT +
Preference number: 2 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSRGCPS*KSLVVC
Trigger: ACAAACCACCAAGCTTTTCCAACTCGGACAACCCCG...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CCA 90 bp CAGGGCCCGCAGGTAGTTGGCCTCGGCCTTCTGGAGTCTGCCATTGAGGTGCAGTGTCTAATAACCTGTTaGTTAGTTATTGGAACTGCA +
Preference number: 2 (lower is better)
Translates to: QGPQVVGLGLLESAIEVQCLITC*LVIGTA
Trigger: TGCAGTTCCAATAACTAACCAACAGGTTATTAGACA...CTGCACCTCAATGGCAGACTCCAGAAGGCCGAGGCCAACTACCTGCGGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CAA 90 bp GTCTTTAAGCCTTGTTTTTCCATGATGTTCCACAGTTTGCGGAGATaGGACTGTGTGATGACATCGTCTGGCTTGAGCTGCAGGGCCCGC +
Preference number: 2 (lower is better)
Translates to: VFKPCFSMMFHSLRR*DCVMTSSGLSCRAR
Trigger: GCGGGCCCTGCAGCTCAAGCCAGACGATGTCATCACACAGTCCAATCTCCGCAAACTGTGGAACATCATGGAAAAACAAGGCTTAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR TCA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGATTGTTTGCCATGCCTaGATGGACACTCTGACTTCC +
Preference number: 2 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVIVCHA*MDTLTS
Trigger: GGAAGTCAGAGTGTCCATTCAGGCATGGCAAACAAT...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR TCA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGCATGTGGGCAGCATTaGAGACAACATCAAACTCTG +
Preference number: 2 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVACGQH*RQHQTL
Trigger: CAGAGTTTGATGTTGTCTTCAATGCTGCCCACATGC...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR TCA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAAAGTCACAAACTGTTTTaGGCAGAGGCACAGCATCCA +
Preference number: 2 (lower is better)
Translates to: QKLISRLSQTGKTAALGQSHKLF*AEAQHP
Trigger: TGGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACT...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR GCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCAGGTTCTGTTTTAAGTaGTCTGGTTTACAGTCTATG +
Preference number: 2 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSRFCFK*SGLQSM
Trigger: CATAGACTGTAAACCAGAGCACTTAAAACAGAACCT...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR TCA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCCCTCTGCCCTGGTCTTaGAGTCTAACACCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCPLPWS*SLTPAL
Trigger: AAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGG...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR TCA 90 bp GGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCCCTCTGCCCTGGTCTTaGAGTCTAACACCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: GSVLSALVYSLWVTMTSSPLPWS*SLTPAL
Trigger: AAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGG...GGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR TCA 90 bp TCTAATAACCTGTTGGTTAGTTATTGGAACTGCAAGGCTTACAAACTCCTCCCCCCTCTGCCCTGGTCTTaGAGTCTAACACCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: SNNLLVSYWNCKAYKLLPPLPWS*SLTPAL
Trigger: AAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGG...GGGGAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAGGTTATTAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR TCA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGTATATACATGGAGTGTaGAAGGGAAGGAGAAACAGG +
Preference number: 2 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVYIHGV*KGRRNR
Trigger: CCTGTTTCTCCTTCCCTTTCACACTCCATGTATATA...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CCA 90 bp AAGAATGTCCGTCGGGCTTCTTCCGTCCTTCCTTGGTTCATTAGAATAATACCGACAGCCAGAGGTTCTTaGTTGGCAAGTAGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: KNVRRASSVLPWFIRIIPTARGS*LASRRR
Trigger: CCTTCTTCTACTTGCCAACCAAGAACCTCTGGCTGT...CGGTATTATTCTAATGAACCAAGGAAGGACGGAAGAAGCCCGACGGACATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CAA 90 bp GTCTTAGAAGTCTTTAAGCCTTGTTTTTCCATGATGTTCCACAGTTaGCGGAGATTGGACTGTGTGATGACATCGTCTGGCTTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: VLEVFKPCFSMMFHS*RRLDCVMTSSGLSC
Trigger: GCAGCTCAAGCCAGACGATGTCATCACACAGTCCAATCTCCGCAAACTGTGGAACATCATGGAAAAACAAGGCTTAAAGACTTCTAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR GCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAAGCATGTCAGCCATGTTaGTGCGGTAGTACAAAGCAT +
Preference number: 2 (lower is better)
Translates to: GRRPRNMQANATLYCSFKACQPC*CGSTKH
Trigger: ATGCTTTGTACTACCGCAGCAACATGGCTGACATGC...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CCA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAACAACCGGCGGCTCACTaGGACTCACACTACGTGTTT +
Preference number: 2 (lower is better)
Translates to: IQLECEVWLALLSISFSEQPAAH*DSHYVF
Trigger: AAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTG...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR CAA 90 bp TGGTACTCCACATCTGAAAGGCAGCTATGTCCATTTGCATTCTGCTaGCCATTTGTTACAGTTTTCCCATTGCATTCTCTGTCTACGCTC +
Preference number: 2 (lower is better)
Translates to: WYSTSERQLCPFAFC*PFVTVFPLHSLSTL
Trigger: GAGCGTAGACAGAGAATGCAATGGGAAAACTGTAACAAATGGCAAGCAGAATGCAAATGGACATAGCTGCCTTTCAGATGTGGAGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR TCA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATAAATGAACAAAATCTGTaGCTTACACACCCACCCCTC +
Preference number: 2 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNINEQNL*LTHPPL
Trigger: GAGGGGTGGGTGTGTAAGTCACAGATTTTGTTCATT...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CCA 90 bp AAGTGTTCTAAGCTTCAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGTGCCTACAGCAAAGTaGATTCTTCCAGAAGCGGTA +
Preference number: 2 (lower is better)
Translates to: KCSKLQKLISRLSQTGKTVPTAK*ILPEAV
Trigger: TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCAC...TGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGAACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CCA 90 bp ATGTGGGCAGCATTGAAGACAACATCAAACTCTGTGCTGTCTAGTTCAGCTGCTCTGGTTTACAGTCTATaGGTAACAATGACATCCTCC +
Preference number: 2 (lower is better)
Translates to: MWAALKTTSNSVLSSSAALVYSL*VTMTSS
Trigger: GGAGGATGTCATTGTTACCCATAGACTGTAAACCAG...AGCAGCTGAACTAGACAGCACAGAGTTTGATGTTGTCTTCAATGCTGCCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGCCAGAGGTTCTTGGTTaGCAAGTAGAAGAAGGTGAG +
Preference number: 2 (lower is better)
Translates to: CFKCSGLQSMGNNDILQEPEVLG*QVEEGE
Trigger: CTCACCTTCTTCTACTTGCCAACCAAGAACCTCTGG...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CAA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTaGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTA +
Preference number: 2 (lower is better)
Translates to: TLRVYHSLVTLNPNC*PCLNGHSDFLSQCL
Trigger: TAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR CAA 90 bp TCTCTGAGTTCTGGTACTCCACATCTGAAAGGCAGCTATGTCCATTaGCATTCTGCTTGCCATTTGTTACAGTTTTCCCATTGCATTCTC +
Preference number: 2 (lower is better)
Translates to: SLSSGTPHLKGSYVH*HSACHLLQFSHCIL
Trigger: GAGAATGCAATGGGAAAACTGTAACAAATGGCAAGCAGAATGCAAATGGACATAGCTGCCTTTCAGATGTGGAGTACCAGAACTCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CAA 90 bp TTGGATCTCAGTGATTCCATATACCAATGCTCTGCTTCGGGGAGTTaGCTTAAACGCATATATGCTTCACCCATCATGTTGTACAAGCTC +
Preference number: 2 (lower is better)
Translates to: LDLSDSIYQCSASGS*LKRIYASPIMLYKL
Trigger: GAGCTTGTACAACATGATGGGTGAAGCATATATGCGTTTAAGCAAACTCCCCGAAGCAGAGCATTGGTATATGGAATCACTGAGATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR TCA 90 bp GTGATTCCATATACCAATGCTCTGCTTCGGGGAGTTTGCTTAAACGCATATATGAATGAACAAAATCTGTaGCTTACACACCCACCCCTC +
Preference number: 2 (lower is better)
Translates to: VIPYTNALLRGVCLNAYMNEQNL*LTHPPL
Trigger: GAGGGGTGGGTGTGTAAGTCACAGATTTTGTTCATT...CATATATGCGTTTAAGCAAACTCCCCGAAGCAGAGCATTGGTATATGGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR GCA 90 bp AAGTGTTCTAAGCTTCAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACACCTAATTGTTTGCCATaGCTGAATGGACACTCTGAC +
Preference number: 2 (lower is better)
Translates to: KCSKLQKLISRLSQTGKTPNCLP*LNGHSD
Trigger: GTCAGAGTGTCCATTCAGGCATGGCAAACAATTAGG...TGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGAACACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR GCA 90 bp GCCCTAAATTATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCCCTAATTGTTTGCCATaGCTGAATGGACACTCTGAC +
Preference number: 2 (lower is better)
Translates to: ALNYKACQPCCCGSTKHFPNCLP*LNGHSD
Trigger: GTCAGAGTGTCCATTCAGGCATGGCAAACAATTAGG...GAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAATTTAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CCA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGTCAGTTGCAAAGAACTaGCTTAATGCATCAAGTTTT +
Preference number: 2 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVSVAKN*LNASSF
Trigger: AAAACTTGATGCATTAAGCCAGTTCTTTGCAACTGA...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CCA 90 bp ATATACCAATGCTCTGCTTCGGGGAGTTTGCTTAAACGCATATATGCTTCACCCTTAGTCTCTGAGTTCTaGTACTCCACATCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: IYQCSASGSLLKRIYASPLVSEF*YSTSER
Trigger: CCTTTCAGATGTGGAGTACCAGAACTCAGAGACTAA...GGGTGAAGCATATATGCGTTTAAGCAAACTCCCCGAAGCAGAGCATTGGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAAAACCTGCTGTTCTCCTaGAGAAGTAGCCCTAAATTA +
Preference number: 2 (lower is better)
Translates to: GRRPRNMQANATLYCSFKNLLFS*RSSPKL
Trigger: TAATTTAGGGCTACTTCTCCAGGAGAACAGCAGGTT...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CAA 90 bp AGCTGGGTTCTCTGTGATACATCGTTTTTAATGCCATTTTCTACTTaGGATGCAAAGCTGGACTTAGTCTCTGAGTTCTGGTACTCCACA +
Preference number: 2 (lower is better)
Translates to: SWVLCDTSFLMPFST*DAKLDLVSEFWYST
Trigger: TGTGGAGTACCAGAACTCAGAGACTAAGTCCAGCTTTGCATCCAAAGTAGAAAATGGCATTAAAAACGATGTATCACAGAGAACCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR TCA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATCATACAACTCGAGTGTaGAGTATGGTTAGCTCTACT +
Preference number: 2 (lower is better)
Translates to: AEDLETCRLMLHSIAASNHTTRV*SMVSST
Trigger: AGTAGAGCTAACCATACTTCACACTCGAGTTGTATG...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR TCA 90 bp CAGCCCTGTAGTGAAAAGTGTCAGGGACATTTAGTTATTAATGATCCGTGCATTAGCCTTGTTTTTCCATaGTGTTCCACAGTTTGCGGA +
Preference number: 2 (lower is better)
Translates to: QPCSEKCQGHLVINDPCISLVFP*CSTVCG
Trigger: TCCGCAAACTGTGGAACATCATGGAAAAACAAGGCT...AATGCACGGATCATTAATAACTAAATGTCCCTGACACTTTTCACTACAGGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATAAAAATGGAGGAGGATaGGCTTCTGCCTCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNKNGGG*ASASCV
Trigger: GACACAGGAGGCAGAAGCCCATCCTCCTCCATTTTT...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR TCA 90 bp AAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCCTGAATGGACACTCTaGCTTCCTCTCACAGTGTTT +
Preference number: 2 (lower is better)
Translates to: KRFCFKCSGLQSMGNNDIPEWTL*LPLTVF
Trigger: AAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGG...GATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR TCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATATTGTTTGCCATGCCTaGATGGACACTCTGACTTCC +
Preference number: 2 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNIVCHA*MDTLTS
Trigger: GGAAGTCAGAGTGTCCATTCAGGCATGGCAAACAAT...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR TCA 90 bp ATTATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCTATAGGCTTGACCAATCAAAACTaGGGGTATCTGGACATAGCA +
Preference number: 2 (lower is better)
Translates to: IIKHVSHVAAVVQSISIGLTNQN*GYLDIA
Trigger: TGCTATGTCCAGATACCCTCAGTTTTGATTGGTCAA...GCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR TCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATTCTCAGCTGCTTCTATaGGACGAGCTTCTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNSQLLL*DELLPE
Trigger: TTCTGGAAGAAGCTCGTCTCATAGAAGCAGCTGAGA...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR GCA 90 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGCATTCAGGTTCTGTTTTAAGTaGTCTGGTTTACAGTCTATG +
Preference number: 2 (lower is better)
Translates to: LLTLLGNWCHKKCLNCAFRFCFK*SGLQSM
Trigger: CATAGACTGTAAACCAGAGCACTTAAAACAGAACCT...GAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
3UTR-3UTR GCA 90 bp ATATTTTTAGCACTGTCTGCAATAATCCACCATAAATCCCTGAGCGGAGACATTTTTTGCCATCTCAGCTaGTTCTATGAGACGAGCTTC +
Preference number: 2 (lower is better)
Translates to: IFLALSAIIHHKSLSGDIFCHLS*FYETSF
Trigger: GAAGCTCGTCTCATAGAAGCAGCTGAGATGGCAAAA...AATGTCTCCGCTCAGGGATTTATGGTGGATTATTGCAGACAGTGCTAAAAATAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAATGGGGCAAACTGCCTTaGCATTTTCTGAATTGCTTC +
Preference number: 2 (lower is better)
Translates to: QLLFNGEADHIYMECEREWGKLP*HFLNCF
Trigger: GAAGCAATTCAGAAAATGCCAAGGCAGTTTGCCCCA...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR GCA 90 bp AAGTGTTCTAAGCTTCAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAAGGTTCTGTTTTAAGTaGTCTGGTTTACAGTCTATG +
Preference number: 2 (lower is better)
Translates to: KCSKLQKLISRLSQTGKTRFCFK*SGLQSM
Trigger: CATAGACTGTAAACCAGAGCACTTAAAACAGAACCT...TGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGAACACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR GCA 90 bp CAGCCCTGTAGTGAAAAGTGTCAGGGACATTTAGTTATTAATGATCCGTGCATTGTTAGTTATTGGAACTaGAAGGCTTACAAACTCCTC +
Preference number: 2 (lower is better)
Translates to: QPCSEKCQGHLVINDPCIVSYWN*KAYKLL
Trigger: GAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAAC...AATGCACGGATCATTAATAACTAAATGTCCCTGACACTTTTCACTACAGGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
3UTR-3UTR CCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAACGAGTTGGAAAAGCTTaGTGGTTTGTTTCCCATCCA +
Preference number: 2 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKRVGKA*WFVSHP
Trigger: TGGATGGGAAACAAACCACCAAGCTTTTCCAACTCG...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR TCA 90 bp CAGCCCTGTAGTGAAAAGTGTCAGGGACATTTAGTTATTAATGATCCGTGCATTGTACCCATTAGAAAGTaGTTAACATTCGATACCTAC +
Preference number: 2 (lower is better)
Translates to: QPCSEKCQGHLVINDPCIVPIRK*LTFDTY
Trigger: GTAGGTATCGAATGTTAATCACTTTCTAATGGGTAC...AATGCACGGATCATTAATAACTAAATGTCCCTGACACTTTTCACTACAGGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
3UTR-3UTR TCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGGTACCCATTAGAAAGTaGTTAACATTCGATACCTAC +
Preference number: 2 (lower is better)
Translates to: EDLETCRLMLHSIAASNKVPIRK*LTFDTY
Trigger: GTAGGTATCGAATGTTAATCACTTTCTAATGGGTAC...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR GCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGCATTTGCATTCTGCTTaGCATTTGTTACAGTTTTCC +
Preference number: 2 (lower is better)
Translates to: EDLETCRLMLHSIAASNKHLHSA*HLLQFS
Trigger: GGAAAACTGTAACAAATGGCAAGCAGAATGCAAATG...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGAAAACACAAAATCACTaGCAAGCATCATCACACACT +
Preference number: 2 (lower is better)
Translates to: EDLETCRLMLHSIAASNKKTQNH*QASSHT
Trigger: AGTGTGTGATGATGCTTGCCAGTGATTTTGTGTTTT...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR TCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAAAACATAGCAGATTCTaGCAGATCTTGACACAGTAT +
Preference number: 2 (lower is better)
Translates to: QLLFNGEADHIYMECEREKHSRF*QILTQY
Trigger: ATACTGTGTCAAGATCTGTCAGAATCTGCTATGTTT...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CCA 90 bp AGAAGCACAAAACACCTTCCCTTTTGTCTAATAACCTGTTGGTTAGTTATTGGATTCTACTGGGCAGTTTaGGGGAAAATATTGACGATA +
Preference number: 2 (lower is better)
Translates to: RSTKHLPFCLITCWLVIGFYWAV*GKILTI
Trigger: TATCGTCAATATTTTCCCCCAAACTGCCCAGTAGAA...TCCAATAACTAACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTTGTGCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATTTCAACCCACTATTTTaGTTTGACCACGGGTTTGTT +
Preference number: 2 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNFNPLF*FDHGFV
Trigger: AACAAACCCGTGGTCAAACCAAAATAGTGGGTTGAA...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR TCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAAAAACATAGCAGATTCTaGCAGATCTTGACACAGTAT +
Preference number: 2 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKKHSRF*QILTQY
Trigger: ATACTGTGTCAAGATCTGTCAGAATCTGCTATGTTT...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATCTGTTGGTTAGTTATTaGAACTGCAAGGCTTACAAA +
Preference number: 2 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNLLVSY*NCKAYK
Trigger: TTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAG...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATAAACATTATGTGCACTaGTCAAGAAACATAGCAGAT +
Preference number: 2 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNKHYVH*SRNIAD
Trigger: ATCTGCTATGTTTCTTGACCAGTGCACATAATGTTT...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAAAAACATTATGTGCACTaGTCAAGAAACATAGCAGAT +
Preference number: 2 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKKHYVH*SRNIAD
Trigger: ATCTGCTATGTTTCTTGACCAGTGCACATAATGTTT...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CCA 90 bp AAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCTGTCTAATAACCTGTTaGTTAGTTATTGGAACTGCA +
Preference number: 2 (lower is better)
Translates to: KRFCFKCSGLQSMGNNDICLITC*LVIGTA
Trigger: TGCAGTTCCAATAACTAACCAACAGGTTATTAGACA...GATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR CCA 72 bp CAGTTTGCGGAGATTGGACTGTGTGATGACATCGTCTaGCTTGAGCTGCAGGGCCCGCAGGTAGTTGGCCTC +
Preference number: 3 (lower is better)
Translates to: QFAEIGLCDDIV*LELQGPQVVGL
Trigger: GAGGCCAACTACCTGCGGGCCCTGCAGCTCAAGCCAGACGATGTCATCACACAGTCCAATCTCCGCAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR TCA 72 bp GCAGGTAGTTGGCCTCGGCCTTCTGGAGTCTGCCATTaGGGTGCAGAATGGCTCCCAGGTTCATCAAAGCAG +
Preference number: 3 (lower is better)
Translates to: AGSWPRPSGVCH*GAEWLPGSSKQ
Trigger: CTGCTTTGATGAACCTGGGAGCCATTCTGCACCTCAATGGCAGACTCCAGAAGGCCGAGGCCAACTACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 72 bp GGAGGCTGTCCGAATCAGCAGCGGGGTTGTCCGAGTTaGAAAAGCTTGGTGGTTTGTTTCCCATCCAGTATA +
Preference number: 3 (lower is better)
Translates to: GGCPNQQRGCPS*KSLVVCFPSSI
Trigger: TATACTGGATGGGAAACAAACCACCAAGCTTTTCCAACTCGGACAACCCCGCTGCTGATTCGGACAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CAA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAACCGGCTTTCCCCTTTTaGGTGTTAACAGCTGTGCCT +
Preference number: 3 (lower is better)
Translates to: QKLISRLSQTGKTAALGQPAFPF*VLTAVP
Trigger: AGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGG...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CAA 90 bp ATGTGGGCAGCATTGAAGACAACATCAAACTCTGTGCTGTCTAGTTCAGCTGCTGAATCAGCAGCGGGGTaGTCCGAGTTGGAAAAGCTT +
Preference number: 3 (lower is better)
Translates to: MWAALKTTSNSVLSSSAAESAAG*SELEKL
Trigger: AAGCTTTTCCAACTCGGACAACCCCGCTGCTGATTC...AGCAGCTGAACTAGACAGCACAGAGTTTGATGTTGTCTTCAATGCTGCCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR TCA 72 bp GAGATGAGCAGGGATGTGGTCAGTCTTGGATCTCAGTaGTTCCATATACCAATGCTCTGCTTCGGGGAGTTT +
Preference number: 3 (lower is better)
Translates to: EMSRDVVSLGSQ*FHIPMLCFGEF
Trigger: AAACTCCCCGAAGCAGAGCATTGGTATATGGAATCACTGAGATCCAAGACTGACCACATCCCTGCTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 72 bp CCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTaGATTCTTCCAGAAGCGGTAGTGACCTCAATGACC +
Preference number: 3 (lower is better)
Translates to: PFLVLTAVPTAK*ILPEAVVTSMT
Trigger: GGTCATTGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CAA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAACCGGCTTTCCCCTTTTaGGTGTTAACAGCTGTGCCT +
Preference number: 3 (lower is better)
Translates to: GRRPRNMQANATLYCSFKPAFPF*VLTAVP
Trigger: AGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGG...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR GCA 72 bp CACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATaGCTGAATGGACACTCTGACTTCCTCTCACAGTGT +
Preference number: 3 (lower is better)
Translates to: HSLVTLNPNCLP*LNGHSDFLSQC
Trigger: ACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CAA 90 bp ATGACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGTTTGACCACGGGTTaGTTGTTAAATATCATTCTG +
Preference number: 3 (lower is better)
Translates to: MTSALVLKSNTSSCHSTAGLTTG*LLNIIL
Trigger: CAGAATGATATTTAACAACAAACCCGTGGTCAAACC...AGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CAA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATCAGTCACAAACTGTTTaGAGCAGAGGCACAGCATCC +
Preference number: 3 (lower is better)
Translates to: AEDLETCRLMLHSIAASNQSQTV*SRGTAS
Trigger: GGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACTG...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CAA 90 bp ATATACCAATGCTCTGCTTCGGGGAGTTTGCTTAAACGCATATATGCTTCACCCGTGGGGCAAACTGCCTaGGCATTTTCTGAATTGCTT +
Preference number: 3 (lower is better)
Translates to: IYQCSASGSLLKRIYASPVGQTA*AFSELL
Trigger: AAGCAATTCAGAAAATGCCAAGGCAGTTTGCCCCAC...GGGTGAAGCATATATGCGTTTAAGCAAACTCCCCGAAGCAGAGCATTGGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CAA 90 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGCATTCGGGATGTGGTCAGTCTaGGATCTCAGTGATTCCATA +
Preference number: 3 (lower is better)
Translates to: LLTLLGNWCHKKCLNCAFGMWSV*DLSDSI
Trigger: TATGGAATCACTGAGATCCAAGACTGACCACATCCC...GAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR TCA 72 bp TATAAGGCCTCCCCAGTCCCTCATACAACTCGAGTGTaGAGTATGGTTAGCTCTACTCTCCATATCCTTTTC +
Preference number: 3 (lower is better)
Translates to: YKASPVPHTTRV*SMVSSTLHILF
Trigger: GAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTATGAGGGACTGGGGAGGCCTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR TCA 72 bp CCACAGTGTGTAGGTTTCTCCAGTCACAAACTGTTTTaGGCAGAGGCACAGCATCCATTGACCAATCAAAAC +
Preference number: 3 (lower is better)
Translates to: PQCVGFSSHKLF*AEAQHPLTNQN
Trigger: GTTTTGATTGGTCAATGGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACTGGAGAAACCTACACACTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 72 bp CCTCCCCAGTCCCTCATACAACTCGAGTGTGAAGTATaGTTAGCTCTACTCTCCATATCCTTTTCAGAACAT +
Preference number: 3 (lower is better)
Translates to: PPQSLIQLECEV*LALLSISFSEH
Trigger: ATGTTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTATGAGGGACTGGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR CCA 72 bp GCATTTTATGACACAGGCCCAATTATTAACGCTACTTaGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGC +
Preference number: 3 (lower is better)
Translates to: AFYDTGPIINAT*ELVSQEVPQLC
Trigger: GCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAATTGGGCCTGTGTCATAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
3UTR-3UTR CAA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGAACATTTATCAGCATaGCTGTTTAGGTACCCATTA +
Preference number: 3 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVEHLSA*LFRYPL
Trigger: TAATGGGTACCTAAACAGCAATGCTGATAAATGTTC...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CAA 90 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGCATTCGTTACAGTTTTCCCATaGCATTCTCTGTCTACGCTC +
Preference number: 3 (lower is better)
Translates to: LLTLLGNWCHKKCLNCAFVTVFP*HSLSTL
Trigger: GAGCGTAGACAGAGAATGCAATGGGAAAACTGTAAC...GAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CAA 90 bp TCTAATAACCTGTTGGTTAGTTATTGGAACTGCAAGGCTTACAAACTCCTCCCCGGCAGCTATGTCCATTaGCATTCTGCTTGCCATTTG +
Preference number: 3 (lower is better)
Translates to: SNNLLVSYWNCKAYKLLPGSYVH*HSACHL
Trigger: CAAATGGCAAGCAGAATGCAAATGGACATAGCTGCC...GGGGAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAGGTTATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CAA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAAATGCCATTTTCTACTTaGGATGCAAAGCTGGACTTA +
Preference number: 3 (lower is better)
Translates to: QKLISRLSQTGKTAALGQMPFST*DAKLDL
Trigger: TAAGTCCAGCTTTGCATCCAAAGTAGAAAATGGCAT...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CAA 90 bp TCTAATAACCTGTTGGTTAGTTATTGGAACTGCAAGGCTTACAAACTCCTCCCCCTTGAGGAACCGCTTTaGGACTTTGACATAAAGGGC +
Preference number: 3 (lower is better)
Translates to: SNNLLVSYWNCKAYKLLPLEEPL*DFDIKG
Trigger: GCCCTTTATGTCAAAGTCCAAAAGCGGTTCCTCAAG...GGGGAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAGGTTATTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR TCA 72 bp TTGTACAAACAACTGGTAACAGAGCTCTTGTGTGCATaGGGGTCCTTTAGGTTTTCATCTGGGATCTCCGAA +
Preference number: 3 (lower is better)
Translates to: LYKQLVTELLCA*GSFRFSSGISE
Trigger: TTCGGAGATCCCAGATGAAAACCTAAAGGACCCTCATGCACACAAGAGCTCTGTTACCAGTTGTTTGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR GCA 72 bp TTGCATTCTGCTTGCCATTTGTTACAGTTTTCCCATTaGATTCTCTGTCTACGCTCGGGCTCTTCAAACCAT +
Preference number: 3 (lower is better)
Translates to: LHSACHLLQFSH*ILCLRSGSSNH
Trigger: ATGGTTTGAAGAGCCCGAGCGTAGACAGAGAATGCAATGGGAAAACTGTAACAAATGGCAAGCAGAATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 72 bp AAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATaGGTAACAATGACATCCTCCAGGAGGTTTCCGGCT +
Preference number: 3 (lower is better)
Translates to: KGSVLSALVYSL*VTMTSSRRFPA
Trigger: AGCCGGAAACCTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR CCA 72 bp ACTTTGGATGCAAAGCTGGACTTAGTCTCTGAGTTCTaGTACTCCACATCTGAAAGGCAGCTATGTCCATTT +
Preference number: 3 (lower is better)
Translates to: TLDAKLDLVSEF*YSTSERQLCPF
Trigger: AAATGGACATAGCTGCCTTTCAGATGTGGAGTACCAGAACTCAGAGACTAAGTCCAGCTTTGCATCCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 72 bp CATATATGCTTCACCCATCATGTTGTACAAGCTCTGTaGGGCAAACTGCCTTGGCATTTTCTGAATTGCTTC +
Preference number: 3 (lower is better)
Translates to: HICFTHHVVQAL*GKLPWHFLNCF
Trigger: GAAGCAATTCAGAAAATGCCAAGGCAGTTTGCCCCACAGAGCTTGTACAACATGATGGGTGAAGCATATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CAA 90 bp AAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCCGGCTTTCCCCTTTTaGGTGTTAACAGCTGTGCCT +
Preference number: 3 (lower is better)
Translates to: KRFCFKCSGLQSMGNNDIPAFPF*VLTAVP
Trigger: AGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGG...GATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CAA 90 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGCATTCCATTCTGCTTGCCATTaGTTACAGTTTTCCCATTGC +
Preference number: 3 (lower is better)
Translates to: LLTLLGNWCHKKCLNCAFHSACH*LQFSHC
Trigger: GCAATGGGAAAACTGTAACAAATGGCAAGCAGAATG...GAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR TCA 72 bp GTTACCCCATGCTTTAGCTGGGTTTACTTTTATCCCTaGTCTATAAAGCATTTCCTCATTCTGCCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: VTPCFSWVYFYP*SIKHFLILPVS
Trigger: GGAGACTGGCAGAATGAGGAAATGCTTTATAGATCAGGGATAAAAGTAAACCCAGCTAAAGCATGGGGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR GCA 72 bp GTAGCCCTAAATTATAAAGCATGTCAGCCATGTTGCTaGGGTAGTACAAAGCATTTCTATAGGCGCTTTCAG +
Preference number: 3 (lower is better)
Translates to: VALNYKACQPCC*GSTKHFYRRFQ
Trigger: CTGAAAGCGCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAATTTAGGGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR GCA 72 bp GTGATTCCATATACCAATGCTCTGCTTCGGGGAGTTTaGTTAAACGCATATATGCTTCACCCATCATGTTGT +
Preference number: 3 (lower is better)
Translates to: VIPYTNALLRGV*LNAYMLHPSCC
Trigger: ACAACATGATGGGTGAAGCATATATGCGTTTAAGCAAACTCCCCGAAGCAGAGCATTGGTATATGGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR GCA 72 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTaGCTCAACTGTGCATTCAGTGAACCTATTAAGAAC +
Preference number: 3 (lower is better)
Translates to: LLTLLGNWCHKK*LNCAFSEPIKN
Trigger: GTTCTTAATAGGTTCACTGAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
3UTR GCA 72 bp GAAGTAGCCCTAAATTATAAAGCATGTCAGCCATGTTaGTGCGGTAGTACAAAGCATTTCTATAGGCGCTTT +
Preference number: 3 (lower is better)
Translates to: EVALNYKACQPC*CGSTKHFYRRF
Trigger: AAAGCGCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAATTTAGGGCTACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CAA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAAGAACATTTATCAGCATaGCTGTTTAGGTACCCATTA +
Preference number: 3 (lower is better)
Translates to: GRRPRNMQANATLYCSFKEHLSA*LFRYPL
Trigger: TAATGGGTACCTAAACAGCAATGCTGATAAATGTTC...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR CCA 72 bp AGCACAAAACACCTTCCCTTTTGTCTAATAACCTGTTaGTTAGTTATTGGAACTGCAAGGCTTACAAACTCC +
Preference number: 3 (lower is better)
Translates to: STKHLPFCLITC*LVIGTARLTNS
Trigger: GGAGTTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CAA 90 bp AGAAGCACAAAACACCTTCCCTTTTGTCTAATAACCTGTTGGTTAGTTATTGGATCTAAGCTTCAGAAATaGATAAGCAGGCTGTCCCAA +
Preference number: 3 (lower is better)
Translates to: RSTKHLPFCLITCWLVIGSKLQK*ISRLSQ
Trigger: TTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGA...TCCAATAACTAACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTTGTGCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CAA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAATCTAAGCTTCAGAAATaGATAAGCAGGCTGTCCCAA +
Preference number: 3 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKSKLQK*ISRLSQ
Trigger: TTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGA...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR CCA 72 bp AAAGACAGAACAACAATGTTCTCCGTAGAAGGAAGCTaGGTTCTCTGTGATACATCGTTTTTAATGCCATTT +
Preference number: 3 (lower is better)
Translates to: KDRTTMFSVEGS*VLCDTSFLMPF
Trigger: AAATGGCATTAAAAACGATGTATCACAGAGAACCCAGCTTCCTTCTACGGAGAACATTGTTGTTCTGTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CCA 72 bp TTTAAGAATGTCCGTCGGGCTTCTTCCGTCCTTCCTTaGTTCATTAGAATAATACCGGTATTTAAATATGCA +
Preference number: 3 (lower is better)
Translates to: FKNVRRASSVLP*FIRIIPVFKYA
Trigger: TGCATATTTAAATACCGGTATTATTCTAATGAACCAAGGAAGGACGGAAGAAGCCCGACGGACATTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR-3UTR CAA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAACAGGTAATTTTCAGTaGCAAAGAACTGGCTTAATG +
Preference number: 3 (lower is better)
Translates to: QLLFNGEADHIYMECERETGNFQ*QRTGLM
Trigger: CATTAAGCCAGTTCTTTGCAACTGAAAATTACCTGT...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CAA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATTTGTCTAATAACCTGTaGGTTAGTTATTGGAACTGC +
Preference number: 3 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNLSNNL*VSYWNC
Trigger: GCAGTTCCAATAACTAACCAACAGGTTATTAGACAA...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR-3UTR CAA 90 bp AGTAAACTTGTCTTGTGCTCTATATTTTTAGCACTGTCTGCAATAATCCACCATGGTTTGACCACGGGTTaGTTGTTAAATATCATTCTG +
Preference number: 3 (lower is better)
Translates to: SKLVLCSIFLALSAIIHHGLTTG*LLNIIL
Trigger: CAGAATGATATTTAACAACAAACCCGTGGTCAAACC...ATGGTGGATTATTGCAGACAGTGCTAAAAATATAGAGCACAAGACAAGTTTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
3UTR-3UTR CAA 90 bp AGTAAACTTGTCTTGTGCTCTATATTTTTAGCACTGTCTGCAATAATCCACCATGAACATTTATCAGCATaGCTGTTTAGGTACCCATTA +
Preference number: 3 (lower is better)
Translates to: SKLVLCSIFLALSAIIHHEHLSA*LFRYPL
Trigger: TAATGGGTACCTAAACAGCAATGCTGATAAATGTTC...ATGGTGGATTATTGCAGACAGTGCTAAAAATATAGAGCACAAGACAAGTTTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCGCGGAAGCGCAGGGCTaGTCTTTCGCGCGGGTCGCG +
Preference number: 4 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSAEAQG*SFARVA
Trigger: CGCGACCCGCGCGAAAGACCAGCCCTGCGCTTCCGC...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321196.8
3UTR CAA 72 bp GTGCGGGTGAGGAGGCTGTCCGAATCAGCAGCGGGGTaGTCCGAGTTGGAAAAGCTTGGTGGTTTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VRVRRLSESAAG*SELEKLGGLFP
Trigger: GGGAAACAAACCACCAAGCTTTTCCAACTCGGACAACCCCGCTGCTGATTCGGACAGCCTCCTCACCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp TCTAATAACCTGTTGGTTAGTTATTGGAACTGCAAGGCTTACAAACTCCTCCCCGGCGCCCGCAAGCGGTaGGCGGCGTTTGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SNNLLVSYWNCKAYKLLPGARKR*AAFGLR
Trigger: GCGGAGCCCAAACGCCGCTCACCGCTTGCGGGCGCC...GGGGAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAGGTTATTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR GCA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTACGTCTCCGCAGCTCCTaGGTCCTCCCCGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVRLRSS*VLPGCG
Trigger: CCCGCACCCGGGGAGGACGCAGGAGCTGCGGAGACG...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR CCA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAAGGGACTCGGAGGAGGTaGAAGGGTGCGGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: QKLISRLSQTGKTAALGQGTRRR*KGAGWG
Trigger: CCCCCATCCCGCACCCTTCCACCTCCTCCGAGTCCC...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR TCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCTCTGGAGTCTGCCATTaGGGTGCAGAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSSGVCH*GAEWLP
Trigger: TGGGAGCCATTCTGCACCTCAATGGCAGACTCCAGA...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTGCGGAAGCGCAGGGCTaGTCTTTCGCGCGGGTCGCG +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETAEAQG*SFARVA
Trigger: CGCGACCCGCGCGAAAGACCAGCCCTGCGCTTCCGC...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp TGTATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACGGCGCCCGCAAGCGGTaGGCGGCGTTTGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: CIHISCSKDIGSKEAVGYGARKR*AAFGLR
Trigger: GCGGAGCCCAAACGCCGCTCACCGCTTGCGGGCGCC...GTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTACACCACACTCCCCATaGCCGGCGCCCGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETTPHSP*PAPASG
Trigger: ACCGCTTGCGGGCGCCGGGCATGGGGAGTGTGGTGT...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAACCGCACTCAGGGTGTTaGGATACAAGGCGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QKLISRLSQTGKTAALGQPHSGC*DTRRAP
Trigger: TGGGGCTCGCCTTGTATCTCAACACCCTGAGTGCGG...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR TCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCGCTGGACTTAGTCTCTaGGTTCTGGTACTCCACATC +
Preference number: 4 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSAGLSL*VLVLHI
Trigger: GATGTGGAGTACCAGAACTCAGAGACTAAGTCCAGC...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCACACCACACTCCCCATaGCCGGCGCCCGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCTPHSP*PAPASG
Trigger: ACCGCTTGCGGGCGCCGGGCATGGGGAGTGTGGTGT...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR GCA 90 bp GGACTCACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGTGCGTCCTCCCCGGGTaGGGGCTCACACCACACTCC +
Preference number: 4 (lower is better)
Translates to: GLTLRVYHSLVTLNPNCLCVLPG*GLTPHS
Trigger: GGAGTGTGGTGTGAGCCCGCACCCGGGGAGGACGCA...CAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGTGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR GCA 90 bp TGTATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACCGTCTCCGCAGCTCCTaGGTCCTCCCCGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: CIHISCSKDIGSKEAVGYRLRSS*VLPGCG
Trigger: CCCGCACCCGGGGAGGACGCAGGAGCTGCGGAGACG...GTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGAGTCTGCCATTGAGGTaGAGAATGGCTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGSLPLR*RMAPRF
Trigger: GAACCTGGGAGCCATTCTGCACCTCAATGGCAGACT...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGGGGACTCGGAGGAGGTaGAAGGGTGCGGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLGTRRR*KGAGWG
Trigger: CCCCCATCCCGCACCCTTCCACCTCCTCCGAGTCCC...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
3UTR CAA 72 bp AGGAGGCTGTCCGAATCAGCAGCGGGGTTGTCCGAGTaGGAAAAGCTTGGTGGTTTGTTTCCCATCCAGTAT +
Preference number: 4 (lower is better)
Translates to: RRLSESAAGLSE*EKLGGLFPIQY
Trigger: ATACTGGATGGGAAACAAACCACCAAGCTTTTCCAACTCGGACAACCCCGCTGCTGATTCGGACAGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACCCGCACTCAGGGTGTTaGGATACAAGGCGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNPHSGC*DTRRAP
Trigger: TGGGGCTCGCCTTGTATCTCAACACCCTGAGTGCGG...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR TCA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGCCCCAGGTTCTGGCTaGGTAGCCTCTTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVAPGSG*VASCRT
Trigger: TGTTCTACAAGAGGCTACTCAGCCAGAACCTGGGGC...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR TCA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGGCTGGACTTAGTCTCTaGGTTCTGGTACTCCACATC +
Preference number: 4 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGAGLSL*VLVLHI
Trigger: GATGTGGAGTACCAGAACTCAGAGACTAAGTCCAGC...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGAATCAGTGGGAGTCCTaGGTCCTGAGCTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGNQWES*VLSLFS
Trigger: GGAAAACAAGCTCAGGACTCAGGACTCCCACTGATT...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR GCA 90 bp CTTCCAGAAGCGGTAGTGACCTCAATGACCTCTGCCCTGGTCTTGAAGTCTAACGTTCCTTCCACAACATaGTGCATCCTGCGCACAGTC +
Preference number: 4 (lower is better)
Translates to: LPEAVVTSMTSALVLKSNVPSTT*CILRTV
Trigger: GACTGTGCGCAGGATGCAGCATGTTGTGGAAGGAAC...GTTAGACTTCAAGACCAGGGCAGAGGTCATTGAGGTCACTACCGCTTCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAAGAAAGAGGCGCGGGTaGGAGGGACAAGGCGAACCG +
Preference number: 4 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVRKRRG*EGQGEP
Trigger: CGGTTCGCCTTGTCCCTCCCACCCGCGCCTCTTTCT...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR CCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTAGAAAGAGGCGCGGGTaGGAGGGACAAGGCGAACCG +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETRKRRG*EGQGEP
Trigger: CGGTTCGCCTTGTCCCTCCCACCCGCGCCTCTTTCT...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGCATTCGACCAAGCCGGGCTCTaGGACCAGCTGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLTLLGNWCHKKCLNCAFDQAGL*DQLEEE
Trigger: CTCTTCCTCCAGCTGGTCCCAGAGCCCGGCTTGGTC...GAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR CCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGGGGCCCGCAGGTAGTTaGCCTCGGCCTTCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: CFKCSGLQSMGNNDILQEGPAGS*PRPSGV
Trigger: GACTCCAGAAGGCCGAGGCCAACTACCTGCGGGCCC...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCAGCCCCAGGTTCTGGCTaGGTAGCCTCTTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSAPGSG*VASCRT
Trigger: TGTTCTACAAGAGGCTACTCAGCCAGAACCTGGGGC...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR TCA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGCTGGTACTCCACATCTaGAAGGCAGCTATGTCCATT +
Preference number: 4 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGLVLHI*KAAMSI
Trigger: AATGGACATAGCTGCCTTTCAGATGTGGAGTACCAG...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GATGCAAAGCTGGACTTAGTCTCTGAGTTCTGGTACTCCACATCTGAAAGGCAGTCTGGAGTCTGCCATTaGGGTGCAGAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: DAKLDLVSEFWYSTSERQSGVCH*GAEWLP
Trigger: TGGGAGCCATTCTGCACCTCAATGGCAGACTCCAGA...CTGCCTTTCAGATGTGGAGTACCAGAACTCAGAGACTAAGTCCAGCTTTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR GCA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAATCGTCCCACGATTCCTaGCACTGCCTCCGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: QKLISRLSQTGKTAALGQSSHDS*HCLRVN
Trigger: ATTCACACGGAGGCAGTGGCAGGAATCGTGGGACGA...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR GCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCTTTTGCCATCTCAGCTaGTTCTATGAGACGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSFCHLS*FYETSF
Trigger: GAAGCTCGTCTCATAGAAGCAGCTGAGATGGCAAAA...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGAGGAGGATGGGCTTCTaGCTCCTGTGTCAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVRRMGF*LLCQVL
Trigger: TAAGACCTGACACAGGAGGCAGAAGCCCATCCTCCT...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCGATGTGAACCAGATTTaGTTCCCAAAGCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSDVNQI*FPKHSA
Trigger: AGCACTGTGCTTTGGGAAGCAAATCTGGTTCACATC...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGGACCAAGCCGGGCTCTaGGACCAGCTGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLDQAGL*DQLEEE
Trigger: CTCTTCCTCCAGCTGGTCCCAGAGCCCGGCTTGGTC...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGCCAGAGGTTCTTGGTTaGCAAGTAGAAGAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGPEVLG*QVEEGE
Trigger: CTCACCTTCTTCTACTTGCCAACCAAGAACCTCTGG...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACTTGGCCTCGGCCTTCTaGAGTCTGCCATTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNLASAF*SLPLRC
Trigger: GCACCTCAATGGCAGACTCCAGAAGGCCGAGGCCAA...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAAAGCTCCCTTCTCCAGTaGAGTGAGAAGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRRPRNMQANATLYCSFKSSLLQ*SEKRWL
Trigger: CAGCCACCGCTTCTCACTTCACTGGAGAAGGGAGCT...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR TCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCTTGACCAATCAAAACTaGGGGTATCTGGACATAGCA +
Preference number: 4 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSLTNQN*GYLDIA
Trigger: TGCTATGTCCAGATACCCTCAGTTTTGATTGGTCAA...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTACGAGCCCCAGAGCGCTaGTCACCAACTCTGCAATCA +
Preference number: 4 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVRAPER*SPTLQS
Trigger: TGATTGCAGAGTTGGTGAGCAGCGCTCTGGGGCTCG...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR GCA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAAGGCGAAAAGAAAGAGTaGAGAGTGGCCGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: QKLISRLSQTGKTAALGQGEKKE*RVAGRT
Trigger: AGTCCTACCGGCCACTCTGCACTCTTTCTTTTCGCC...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp CGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCCTGAATGTGAGAAGCGGTGGCTaGAGACTCCAGAAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RVYHSLVTLNPNCLPCLNVRSGG*RLQKLP
Trigger: CGGGAGCTTCTGGAGTCTCCAGCCACCGCTTCTCAC...ATTCAGGCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR CCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAAGGAGAAAGAAGAGACTaGCCCCGACATCGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: GRRPRNMQANATLYCSFKGERRD*PRHRLV
Trigger: GACGAGCCGATGTCGGGGCCAGTCTCTTCTTTCTCC...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp CTTCCAGAAGCGGTAGTGACCTCAATGACCTCTGCCCTGGTCTTGAAGTCTAACACAGCCAGAGGTTCTTaGTTGGCAAGTAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LPEAVVTSMTSALVLKSNTARGS*LASRRR
Trigger: CCTTCTTCTACTTGCCAACCAAGAACCTCTGGCTGT...GTTAGACTTCAAGACCAGGGCAGAGGTCATTGAGGTCACTACCGCTTCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGTGGGGCAAACTGCCTTaGCATTTTCTGAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGWGKLP*HFLNCF
Trigger: GAAGCAATTCAGAAAATGCCAAGGCAGTTTGCCCCA...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCGGATGTGGTCAGTCTTaGATCTCAGTGATTCCATAT +
Preference number: 4 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSGCGQS*ISVIPY
Trigger: ATATGGAATCACTGAGATCCAAGACTGACCACATCC...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATATTGGCCTCGGCCTTCTaGAGTCTGCCATTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNILASAF*SLPLRC
Trigger: GCACCTCAATGGCAGACTCCAGAAGGCCGAGGCCAA...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGAAAAATGGAGGAGGATaGGCTTCTGCCTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVKNGGG*ASASCV
Trigger: GACACAGGAGGCAGAAGCCCATCCTCCTCCATTTTT...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACCAACCGGCGGCTCACTaGGACTCACACTACGTGTTT +
Preference number: 4 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNQPAAH*DSHYVF
Trigger: AAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTG...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGACGCTACTTGGGAACTaGTGTCACAAGAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVTLLGN*CHKKCL
Trigger: GAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGT...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR TCA 90 bp ATGACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTACATCAAGCCAGCCATaGATGTCCAGTATCCATCAC +
Preference number: 4 (lower is better)
Translates to: MTSALVLKSNTSSCHSTATSSQP*MSSIHH
Trigger: GTGATGGATACTGGACATTCATGGCTGGCTTGATGT...AGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR TCA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGAGTCTTGGATCTCAGTaGTTCCATATACCAATGCTC +
Preference number: 4 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGSLGSQ*FHIPML
Trigger: GAGCATTGGTATATGGAATCACTGAGATCCAAGACT...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATCTGGAGTCTGCCATTaGGGTGCAGAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GRRPRNMQANATLYCSFKSGVCH*GAEWLP
Trigger: TGGGAGCCATTCTGCACCTCAATGGCAGACTCCAGA...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCCATAGCCACTGTTTCTaGCTAGAGCTCAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSHSHCF*LELRKI
Trigger: AATTTTTCTGAGCTCTAGTCAGAAACAGTGGCTATG...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR GCA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATAGCTGCTCACCAACTCTaGAATCATCTCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNIAAHQL*NHLSTA
Trigger: GGCGGTGGAGAGATGATTGCAGAGTTGGTGAGCAGC...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR GCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGCGAGCCCCAGAGCGCTaGTCACCAACTCTGCAATCA +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLRAPER*SPTLQS
Trigger: TGATTGCAGAGTTGGTGAGCAGCGCTCTGGGGCTCG...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAAGAGACCAGTGACTGCTaGATGCAACAGGACATTGAC +
Preference number: 4 (lower is better)
Translates to: QKLISRLSQTGKTAALGQETSDC*MQQDID
Trigger: GTCAATGTCCTGTTGCATGCAGCAGTCACTGGTCTC...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR GCA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATCACGATTCCTGCCACTaGCTCCGTGTGAATGGGGTG +
Preference number: 4 (lower is better)
Translates to: AEDLETCRLMLHSIAASNHDSCH*LRVNGV
Trigger: CACCCCATTCACACGGAGGCAGTGGCAGGAATCGTG...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR GCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGCACGATTCCTGCCACTaGCTCCGTGTGAATGGGGTG +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLHDSCH*LRVNGV
Trigger: CACCCCATTCACACGGAGGCAGTGGCAGGAATCGTG...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGTGCTTCTGCAAACCTaGTGTTCTCCTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVVLLQT*CSPGEV
Trigger: TACTTCTCCAGGAGAACAGCAGGTTTGCAGAAGCAC...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGCGTCCATGGAGTTTCTaGGAGAAGGTCCTGATTAGT +
Preference number: 4 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVRPWSF*EKVLIS
Trigger: ACTAATCAGGACCTTCTCCCAGAAACTCCATGGACG...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACTTGTGGCTGCCACTGTaGGTTAGAAGAGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNLWLPL*VRRVPQ
Trigger: TTGGGGGACTCTTCTAACCCACAGTGGCAGCCACAA...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGGGAGAAAGAAGAGACTaGCCCCGACATCGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLGERRD*PRHRLV
Trigger: GACGAGCCGATGTCGGGGCCAGTCTCTTCTTTCTCC...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp GGACTCACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGGGAGAAAGAAGAGACTaGCCCCGACATCGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: GLTLRVYHSLVTLNPNCLGERRD*PRHRLV
Trigger: GACGAGCCGATGTCGGGGCCAGTCTCTTCTTTCTCC...CAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGTGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAAGCCTGTCTGAGCATGTaGGCAGCATTGAAGACAACA +
Preference number: 4 (lower is better)
Translates to: QKLISRLSQTGKTAALGQACLSM*AALKTT
Trigger: TGTTGTCTTCAATGCTGCCCACATGCTCAGACAGGC...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ACAATGACATCCTCCAGGAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGCCTGTCTGAGCATGTaGGCAGCATTGAAGACAACA +
Preference number: 4 (lower is better)
Translates to: TMTSSRRFPAFPFLVLTAACLSM*AALKTT
Trigger: TGTTGTCTTCAATGCTGCCCACATGCTCAGACAGGC...AGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTCCTGGAGGATGTCATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGTTGGCCTCGGCCTTCTaGAGTCTGCCATTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: CFKCSGLQSMGNNDILQELASAF*SLPLRC
Trigger: GCACCTCAATGGCAGACTCCAGAAGGCCGAGGCCAA...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAAGGGCCCGCAGGTAGTTaGCCTCGGCCTTCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKGPAGS*PRPSGV
Trigger: GACTCCAGAAGGCCGAGGCCAACTACCTGCGGGCCC...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GACATCCTCCAGGAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCCTCGAGTGTGAAGTATaGTTAGCTCTACTCTCCATA +
Preference number: 4 (lower is better)
Translates to: DILQEVSGFPLFGVNSCALECEV*LALLSI
Trigger: TATGGAGAGTAGAGCTAACCATACTTCACACTCGAG...GGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTCCTGGAGGATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCTTCAACCCACTATTTTaGTTTGACCACGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSFNPLF*FDHGFV
Trigger: AACAAACCCGTGGTCAAACCAAAATAGTGGGTTGAA...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR CAA 72 bp CCTTGTTTTTCCATGATGTTCCACAGTTTGCGGAGATaGGACTGTGTGATGACATCGTCTGGCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PCFSMMFHSLRR*DCVMTSSGLSC
Trigger: GCAGCTCAAGCCAGACGATGTCATCACACAGTCCAATCTCCGCAAACTGTGGAACATCATGGAAAAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGGCCCCAGGTTCTGGCTaGGTAGCCTCTTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLAPGSG*VASCRT
Trigger: TGTTCTACAAGAGGCTACTCAGCCAGAACCTGGGGC...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp GAGTTGGAAAAGCTTGGTGGTTTGTTTCCCATCCAGTATAACCGGGCACCCAAACTGGTACTCCACATCTaGAAGGCAGCTATGTCCATT +
Preference number: 4 (lower is better)
Translates to: ELEKLGGLFPIQYNRAPKLVLHI*KAAMSI
Trigger: AATGGACATAGCTGCCTTTCAGATGTGGAGTACCAG...TTTGGGTGCCCGGTTATACTGGATGGGAAACAAACCACCAAGCTTTTCCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACGCTGGACTTAGTCTCTaGGTTCTGGTACTCCACATC +
Preference number: 4 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNAGLSL*VLVLHI
Trigger: GATGTGGAGTACCAGAACTCAGAGACTAAGTCCAGC...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAACCTGAATGGACACTCTaGCTTCCTCTCACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: QKLISRLSQTGKTAALGQPEWTL*LPLTVF
Trigger: AAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGG...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCAATTGTTTGCCATGCCTaGATGGACACTCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSIVCHA*MDTLTS
Trigger: GGAAGTCAGAGTGTCCATTCAGGCATGGCAAACAAT...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCAAACATAGCAGATTCTaGCAGATCTTGACACAGTAT +
Preference number: 4 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSKHSRF*QILTQY
Trigger: ATACTGTGTCAAGATCTGTCAGAATCTGCTATGTTT...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGGCTGCTCACCAACTCTaGAATCATCTCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLAAHQL*NHLSTA
Trigger: GGCGGTGGAGAGATGATTGCAGAGTTGGTGAGCAGC...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp GACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTTGCGAGCCCCAGAGCGCTaGTCACCAACTCTGCAATCA +
Preference number: 4 (lower is better)
Translates to: DLETCRLMLHSIAASNKLRAPER*SPTLQS
Trigger: TGATTGCAGAGTTGGTGAGCAGCGCTCTGGGGCTCG...CAACTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR GCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTGGTAGGACTTGTGGCTaGCACTGTGGGTTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETGRTCG*HCGLEE
Trigger: CTCTTCTAACCCACAGTGGCAGCCACAAGTCCTACC...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGGCGAAAAGAAAGAGTaGAGAGTGGCCGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVGEKKE*RVAGRT
Trigger: AGTCCTACCGGCCACTCTGCACTCTTTCTTTTCGCC...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR GCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGTCGTCCCACGATTCCTaGCACTGCCTCCGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLSSHDS*HCLRVN
Trigger: ATTCACACGGAGGCAGTGGCAGGAATCGTGGGACGA...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp ATGACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTTTTTGCCATCTCAGCTaGTTCTATGAGACGAGCTTC +
Preference number: 4 (lower is better)
Translates to: MTSALVLKSNTSSCHSTAFCHLS*FYETSF
Trigger: GAAGCTCGTCTCATAGAAGCAGCTGAGATGGCAAAA...AGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATAAGGAGGATGGGCTTCTaGCTCCTGTGTCAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNIRRMGF*LLCQVL
Trigger: TAAGACCTGACACAGGAGGCAGAAGCCCATCCTCCT...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp ATGACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTCCTAATTGTTTGCCATaGCTGAATGGACACTCTGAC +
Preference number: 4 (lower is better)
Translates to: MTSALVLKSNTSSCHSTAPNCLP*LNGHSD
Trigger: GTCAGAGTGTCCATTCAGGCATGGCAAACAATTAGG...AGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAACGTCCATGGAGTTTCTaGGAGAAGGTCCTGATTAGT +
Preference number: 4 (lower is better)
Translates to: QKLISRLSQTGKTAALGQRPWSF*EKVLIS
Trigger: ACTAATCAGGACCTTCTCCCAGAAACTCCATGGACG...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTTTGTGGCTGCCACTGTaGGTTAGAAGAGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETLWLPL*VRRVPQ
Trigger: TTGGGGGACTCTTCTAACCCACAGTGGCAGCCACAA...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCAGTGCCTACAGCAAAGTaGATTCTTCCAGAAGCGGTA +
Preference number: 4 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSVPTAK*ILPEAV
Trigger: TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCAC...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGTTCAACCCACTATTTTaGTTTGACCACGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGFNPLF*FDHGFV
Trigger: AACAAACCCGTGGTCAAACCAAAATAGTGGGTTGAA...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGTTACAAACTCGCCTTTaGGCTGTCATCTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGLQTRL*AVIYKR
Trigger: CCTTTTATAGATGACAGCCCAAAGGCGAGTTTGTAA...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTAGGACAGAGAGGCATTaGCCAGACCTCATAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETRTERH*PDLIVS
Trigger: GGACACTATGAGGTCTGGCCAATGCCTCTCTGTCCT...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCAGACATCATAAACTGCTaGAACTGCGAGAACAGTCAC +
Preference number: 4 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSDIINC*NCENSH
Trigger: GTGACTGTTCTCGCAGTTTCAGCAGTTTATGATGTC...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR TCA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAGTCACAAACTGTTTTaGGCAGAGGCACAGCATCCA +
Preference number: 4 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNSHKLF*AEAQHP
Trigger: TGGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACT...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATCCTCTGCCCTGGTCTTaGAGTCTAACACCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: AEDLETCRLMLHSIAASNPLPWS*SLTPAL
Trigger: AAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGG...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp ACAATGACATCCTCCAGGAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTAATGAACAAAATCTGTaGCTTACACACCCACCCCTC +
Preference number: 4 (lower is better)
Translates to: TMTSSRRFPAFPFLVLTANEQNL*LTHPPL
Trigger: GAGGGGTGGGTGTGTAAGTCACAGATTTTGTTCATT...AGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTCCTGGAGGATGTCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GACATCCTCCAGGAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCGTACCCATTAGAAAGTaGTTAACATTCGATACCTAC +
Preference number: 4 (lower is better)
Translates to: DILQEVSGFPLFGVNSCAVPIRK*LTFDTY
Trigger: GTAGGTATCGAATGTTAATCACTTTCTAATGGGTAC...GGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTCCTGGAGGATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGGGCGAAAAGAAAGAGTaGAGAGTGGCCGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLGEKKE*RVAGRT
Trigger: AGTCCTACCGGCCACTCTGCACTCTTTCTTTTCGCC...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGGTTCCTTCCACAACATaGTGCATCCTGCGCACAGTC +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLVPSTT*CILRTV
Trigger: GACTGTGCGCAGGATGCAGCATGTTGTGGAAGGAAC...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGCATTCAGGCCTCAGCCTGGCTaGCAGATCATAATACTTCTC +
Preference number: 4 (lower is better)
Translates to: LLTLLGNWCHKKCLNCAFRPQPG*QIIILL
Trigger: GAGAAGTATTATGATCTGGCAGCCAGGCTGAGGCCT...GAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR GCA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATAAGGCCTCAGCCTGGCTaGCAGATCATAATACTTCTC +
Preference number: 4 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNIRPQPG*QIIILL
Trigger: GAGAAGTATTATGATCTGGCAGCCAGGCTGAGGCCT...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp GGACTCACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGAGTCTGCCATTGAGGTaGAGAATGGCTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GLTLRVYHSLVTLNPNCLSLPLR*RMAPRF
Trigger: GAACCTGGGAGCCATTCTGCACCTCAATGGCAGACT...CAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGTGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGCATTCCGGGGTTGTCCGAGTTaGAAAAGCTTGGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LLTLLGNWCHKKCLNCAFRGCPS*KSLVVC
Trigger: ACAAACCACCAAGCTTTTCCAACTCGGACAACCCCG...GAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CCA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTACGGGGTTGTCCGAGTTaGAAAAGCTTGGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVRGCPS*KSLVVC
Trigger: ACAAACCACCAAGCTTTTCCAACTCGGACAACCCCG...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACCCAGAGGTTCTTGGTTaGCAAGTAGAAGAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNPEVLG*QVEEGE
Trigger: CTCACCTTCTTCTACTTGCCAACCAAGAACCTCTGG...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR CAA 72 bp TCATTGAGGCTAGCCTGTCTGAGCATGTGGGCAGCATaGAAGACAACATCAAACTCTGTGCTGTCTAGTTCA +
Preference number: 4 (lower is better)
Translates to: SLRLACLSMWAA*KTTSNSVLSSS
Trigger: TGAACTAGACAGCACAGAGTTTGATGTTGTCTTCAATGCTGCCCACATGCTCAGACAGGCTAGCCTCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGGCTGGACTTAGTCTCTaGGTTCTGGTACTCCACATC +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLAGLSL*VLVLHI
Trigger: GATGTGGAGTACCAGAACTCAGAGACTAAGTCCAGC...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCAAAGCTGGGTTCTCTGTaGTACATCGTTTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSKLGSL*YIVFNA
Trigger: GGCATTAAAAACGATGTATCACAGAGAACCCAGCTT...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAAGAGCTCTTGTGTGCATaGGGGTCCTTTAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GRRPRNMQANATLYCSFKELLCA*GSFRFS
Trigger: TGAAAACCTAAAGGACCCTCATGCACACAAGAGCTC...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp ACAATGACATCCTCCAGGAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTAGTCTTGGATCTCAGTaGTTCCATATACCAATGCTC +
Preference number: 4 (lower is better)
Translates to: TMTSSRRFPAFPFLVLTASLGSQ*FHIPML
Trigger: GAGCATTGGTATATGGAATCACTGAGATCCAAGACT...AGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTCCTGGAGGATGTCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTATCTCAGCTGCTTCTATaGGACGAGCTTCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVSQLLL*DELLPE
Trigger: TTCTGGAAGAAGCTCGTCTCATAGAAGCAGCTGAGA...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAGCCTTGTTTTTCCATaGTGTTCCACAGTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNSLVFP*CSTVCG
Trigger: TCCGCAAACTGTGGAACATCATGGAAAAACAAGGCT...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAACCTGAATGGACACTCTaGCTTCCTCTCACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: GRRPRNMQANATLYCSFKPEWTL*LPLTVF
Trigger: AAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGG...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTTGGGGAGTCCTGAGTCCTaGGCTTGTTTTCCTGCAACT +
Preference number: 4 (lower is better)
Translates to: DLETCRLMLHSIAASNKLGSPES*ACFPAT
Trigger: AGTTGCAGGAAAACAAGCTCAGGACTCAGGACTCCC...CAACTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR GCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGGGTAGGACTTGTGGCTaGCACTGTGGGTTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKGRTCG*HCGLEE
Trigger: CTCTTCTAACCCACAGTGGCAGCCACAAGTCCTACC...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR GCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGGAGACCAGTGACTGCTaGATGCAACAGGACATTGAC +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLETSDC*MQQDID
Trigger: GTCAATGTCCTGTTGCATGCAGCAGTCACTGGTCTC...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCATTACAGTTTTCCCATTaGATTCTCTGTCTACGCTCG +
Preference number: 4 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSLQFSH*ILCLRS
Trigger: CGAGCGTAGACAGAGAATGCAATGGGAAAACTGTAA...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGCATGTCAGCCATGTTaGTGCGGTAGTACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVACQPC*CGSTKH
Trigger: ATGCTTTGTACTACCGCAGCAACATGGCTGACATGC...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGAGTCTGCCATTGAGGTaGAGAATGGCTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKSLPLR*RMAPRF
Trigger: GAACCTGGGAGCCATTCTGCACCTCAATGGCAGACT...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp GACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTTGAGGAGGATGGGCTTCTaGCTCCTGTGTCAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: DLETCRLMLHSIAASNKLRRMGF*LLCQVL
Trigger: TAAGACCTGACACAGGAGGCAGAAGCCCATCCTCCT...CAACTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp CTTCCAGAAGCGGTAGTGACCTCAATGACCTCTGCCCTGGTCTTGAAGTCTAACAGGTTCTGTTTTAAGTaGTCTGGTTTACAGTCTATG +
Preference number: 4 (lower is better)
Translates to: LPEAVVTSMTSALVLKSNRFCFK*SGLQSM
Trigger: CATAGACTGTAAACCAGAGCACTTAAAACAGAACCT...GTTAGACTTCAAGACCAGGGCAGAGGTCATTGAGGTCACTACCGCTTCTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGATTCAACCCTCCAATaGCATGGTTCAGGCGAAAAG +
Preference number: 4 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVDSTLQ*HGSGEK
Trigger: CTTTTCGCCTGAACCATGCCATTGGAGGGTTGAATC...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCCTGCCTCCGTGTGAATaGGGTGAGAAGCAAACATCA +
Preference number: 4 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCLPPCE*GEKQTS
Trigger: TGATGTTTGCTTCTCACCCCATTCACACGGAGGCAG...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGCTGCCTCCGTGTGAATaGGGTGAGAAGCAAACATCA +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLLPPCE*GEKQTS
Trigger: TGATGTTTGCTTCTCACCCCATTCACACGGAGGCAG...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACCGAGTTGGAAAAGCTTaGTGGTTTGTTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNRVGKA*WFVSHP
Trigger: TGGATGGGAAACAAACCACCAAGCTTTTCCAACTCG...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGCGGGGTTGTCCGAGTTaGAAAAGCTTGGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLRGCPS*KSLVVC
Trigger: ACAAACCACCAAGCTTTTCCAACTCGGACAACCCCG...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp ATATACCAATGCTCTGCTTCGGGGAGTTTGCTTAAACGCATATATGCTTCACCCACAGCCAGAGGTTCTTaGTTGGCAAGTAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: IYQCSASGSLLKRIYASPTARGS*LASRRR
Trigger: CCTTCTTCTACTTGCCAACCAAGAACCTCTGGCTGT...GGGTGAAGCATATATGCGTTTAAGCAAACTCCCCGAAGCAGAGCATTGGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR CCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTACAGCCAGAGGTTCTTaGTTGGCAAGTAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETTARGS*LASRRR
Trigger: CCTTCTTCTACTTGCCAACCAAGAACCTCTGGCTGT...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATCCGTAGAAGGAAGCTaGGTTCTCTGTGATACATCG +
Preference number: 4 (lower is better)
Translates to: GRRPRNMQANATLYCSFKSVEGS*VLCDTS
Trigger: CGATGTATCACAGAGAACCCAGCTTCCTTCTACGGA...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ATGACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTTCTTCCGTCCTTCCTTaGTTCATTAGAATAATACCG +
Preference number: 4 (lower is better)
Translates to: MTSALVLKSNTSSCHSTASSVLP*FIRIIP
Trigger: CGGTATTATTCTAATGAACCAAGGAAGGACGGAAGA...AGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATGCCTGTCTGAGCATGTaGGCAGCATTGAAGACAACA +
Preference number: 4 (lower is better)
Translates to: AEDLETCRLMLHSIAASNACLSM*AALKTT
Trigger: TGTTGTCTTCAATGCTGCCCACATGCTCAGACAGGC...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GGACTCACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGAAAAATGGAGGAGGATaGGCTTCTGCCTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GLTLRVYHSLVTLNPNCLKNGGG*ASASCV
Trigger: GACACAGGAGGCAGAAGCCCATCCTCCTCCATTTTT...CAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGTGAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp CTTCCAGAAGCGGTAGTGACCTCAATGACCTCTGCCCTGGTCTTGAAGTCTAACCTGTTGGTTAGTTATTaGAACTGCAAGGCTTACAAA +
Preference number: 4 (lower is better)
Translates to: LPEAVVTSMTSALVLKSNLLVSY*NCKAYK
Trigger: TTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAG...GTTAGACTTCAAGACCAGGGCAGAGGTCATTGAGGTCACTACCGCTTCTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp CTTCCAGAAGCGGTAGTGACCTCAATGACCTCTGCCCTGGTCTTGAAGTCTAACAAAACACAAAATCACTaGCAAGCATCATCACACACT +
Preference number: 4 (lower is better)
Translates to: LPEAVVTSMTSALVLKSNKTQNH*QASSHT
Trigger: AGTGTGTGATGATGCTTGCCAGTGATTTTGTGTTTT...GTTAGACTTCAAGACCAGGGCAGAGGTCATTGAGGTCACTACCGCTTCTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATACGCTACTTGGGAACTaGTGTCACAAGAAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: AEDLETCRLMLHSIAASNTLLGN*CHKKCL
Trigger: GAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGT...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CCA 90 bp CTTCCAGAAGCGGTAGTGACCTCAATGACCTCTGCCCTGGTCTTGAAGTCTAACATTATTAACGCTACTTaGGAACTGGTGTCACAAGAA +
Preference number: 4 (lower is better)
Translates to: LPEAVVTSMTSALVLKSNIINAT*ELVSQE
Trigger: TTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAAT...GTTAGACTTCAAGACCAGGGCAGAGGTCATTGAGGTCACTACCGCTTCTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
3UTR CAA 72 bp GCCACAGTGTGTAGGTTTCTCCAGTCACAAACTGTTTaGAGCAGAGGCACAGCATCCATTGACCAATCAAAA +
Preference number: 4 (lower is better)
Translates to: ATVCRFLQSQTV*SRGTASIDQSK
Trigger: TTTTGATTGGTCAATGGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACTGGAGAAACCTACACACTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CAA 72 bp GTCTTTAAGCCTTGTTTTTCCATGATGTTCCACAGTTaGCGGAGATTGGACTGTGTGATGACATCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: VFKPCFSMMFHS*RRLDCVMTSSG
Trigger: GCCAGACGATGTCATCACACAGTCCAATCTCCGCAAACTGTGGAACATCATGGAAAAACAAGGCTTAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTCTGGGAGAAGGTCCTaGTTAGTCTTGATAGCACGG +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKSGRRS*LVLIAR
Trigger: CCGTGCTATCAAGACTAATCAGGACCTTCTCCCAGA...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR TCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGACATCAAGCCAGCCATaGATGTCCAGTATCCATCAC +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLTSSQP*MSSIHH
Trigger: GTGATGGATACTGGACATTCATGGCTGGCTTGATGT...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp GGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGTCACAAACTGTTTTaGGCAGAGGCACAGCATCCA +
Preference number: 4 (lower is better)
Translates to: GSVLSALVYSLWVTMTSSSHKLF*AEAQHP
Trigger: TGGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACT...GGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGAGTCACAAACTGTTTTaGGCAGAGGCACAGCATCCA +
Preference number: 4 (lower is better)
Translates to: CFKCSGLQSMGNNDILQESHKLF*AEAQHP
Trigger: TGGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACT...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TCTAATAACCTGTTGGTTAGTTATTGGAACTGCAAGGCTTACAAACTCCTCCCCCTGGTACTCCACATCTaGAAGGCAGCTATGTCCATT +
Preference number: 4 (lower is better)
Translates to: SNNLLVSYWNCKAYKLLPLVLHI*KAAMSI
Trigger: AATGGACATAGCTGCCTTTCAGATGTGGAGTACCAG...GGGGAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAGGTTATTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGCTGGTACTCCACATCTaGAAGGCAGCTATGTCCATT +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLLVLHI*KAAMSI
Trigger: AATGGACATAGCTGCCTTTCAGATGTGGAGTACCAG...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp TTTTCTACTTTGGATGCAAAGCTGGACTTAGTCTCTGAGTTCTGGTACTCCACAGAGCTCTTGTGTGCATaGGGGTCCTTTAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: FSTLDAKLDLVSEFWYSTELLCA*GSFRFS
Trigger: TGAAAACCTAAAGGACCCTCATGCACACAAGAGCTC...TGTGGAGTACCAGAACTCAGAGACTAAGTCCAGCTTTGCATCCAAAGTAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCGAGCTCTTGTGTGCATaGGGGTCCTTTAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCELLCA*GSFRFS
Trigger: TGAAAACCTAAAGGACCCTCATGCACACAAGAGCTC...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCTCTCAGCTGCTTCTATaGGACGAGCTTCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCSQLLL*DELLPE
Trigger: TTCTGGAAGAAGCTCGTCTCATAGAAGCAGCTGAGA...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGTCTCAGCTGCTTCTATaGGACGAGCTTCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CFKCSGLQSMGNNDILQESQLLL*DELLPE
Trigger: TTCTGGAAGAAGCTCGTCTCATAGAAGCAGCTGAGA...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATGCATGTGGGCAGCATTaGAGACAACATCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: AEDLETCRLMLHSIAASNACGQH*RQHQTL
Trigger: CAGAGTTTGATGTTGTCTTCAATGCTGCCCACATGC...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAAAGCCTTGTTTTTCCATaGTGTTCCACAGTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: GRRPRNMQANATLYCSFKSLVFP*CSTVCG
Trigger: TCCGCAAACTGTGGAACATCATGGAAAAACAAGGCT...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATATTGTTTGCCATGCCTaGATGGACACTCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: AEDLETCRLMLHSIAASNIVCHA*MDTLTS
Trigger: GGAAGTCAGAGTGTCCATTCAGGCATGGCAAACAAT...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAAGAAATTAAGGTCATATaGAGCTTGTGCAGTACAGCA +
Preference number: 4 (lower is better)
Translates to: QKLISRLSQTGKTAALGQEIKVI*SLCSTA
Trigger: TGCTGTACTGCACAAGCTTCATATGACCTTAATTTC...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR GCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAAGCTGCTCACCAACTCTaGAATCATCTCTCCACCGCC +
Preference number: 4 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKAAHQL*NHLSTA
Trigger: GGCGGTGGAGAGATGATTGCAGAGTTGGTGAGCAGC...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR GCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGCCAGTGACTGCTGCATaGAACAGGACATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLPVTAA*NRTLTR
Trigger: TCTTGTCAATGTCCTGTTGCATGCAGCAGTCACTGG...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGGAGACCAGTGACTGCTaGATGCAACAGGACATTGAC +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKETSDC*MQQDID
Trigger: GTCAATGTCCTGTTGCATGCAGCAGTCACTGGTCTC...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR GCA 90 bp AAGTGTTCTAAGCTTCAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGAAGAGACCAGTGACTaGTGCATGCAACAGGACATT +
Preference number: 4 (lower is better)
Translates to: KCSKLQKLISRLSQTGKTEETSD*CMQQDI
Trigger: AATGTCCTGTTGCATGCAGCAGTCACTGGTCTCTTC...TGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGAACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR GCA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCGAAGAGACCAGTGACTaGTGCATGCAACAGGACATT +
Preference number: 4 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCEETSD*CMQQDI
Trigger: AATGTCCTGTTGCATGCAGCAGTCACTGGTCTCTTC...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR GCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGTTCCTTCCACAACATaGTGCATCCTGCGCACAGTC +
Preference number: 4 (lower is better)
Translates to: QLLFNGEADHIYMECEREVPSTT*CILRTV
Trigger: GACTGTGCGCAGGATGCAGCATGTTGTGGAAGGAAC...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR GCA 90 bp ATGTGGGCAGCATTGAAGACAACATCAAACTCTGTGCTGTCTAGTTCAGCTGCTTTACAGTTTTCCCATTaGATTCTCTGTCTACGCTCG +
Preference number: 4 (lower is better)
Translates to: MWAALKTTSNSVLSSSAALQFSH*ILCLRS
Trigger: CGAGCGTAGACAGAGAATGCAATGGGAAAACTGTAA...AGCAGCTGAACTAGACAGCACAGAGTTTGATGTTGTCTTCAATGCTGCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR GCA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATATGGTGTCACAAGAAGTaGCTCAACTGTGCATTCAGT +
Preference number: 4 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNIWCHKK*LNCAFS
Trigger: ACTGAATGCACAGTTGAGGCACTTCTTGTGACACCA...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTAACCCTCCAATGGCATaGTTCAGGCGAAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETNPPMA*FRRKER
Trigger: TCTTTCTTTTCGCCTGAACCATGCCATTGGAGGGTT...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGGATTCAACCCTCCAATaGCATGGTTCAGGCGAAAAG +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLDSTLQ*HGSGEK
Trigger: CTTTTCGCCTGAACCATGCCATTGGAGGGTTGAATC...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAACGAGTTGGAAAAGCTTaGTGGTTTGTTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: GRRPRNMQANATLYCSFKRVGKA*WFVSHP
Trigger: TGGATGGGAAACAAACCACCAAGCTTTTCCAACTCG...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTCGAGTTGGAAAAGCTTaGTGGTTTGTTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETRVGKA*WFVSHP
Trigger: TGGATGGGAAACAAACCACCAAGCTTTTCCAACTCG...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGTCCGTAGAAGGAAGCTaGGTTCTCTGTGATACATCG +
Preference number: 4 (lower is better)
Translates to: CFKCSGLQSMGNNDILQESVEGS*VLCDTS
Trigger: CGATGTATCACAGAGAACCCAGCTTCCTTCTACGGA...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGAAAAATGGAGGAGGATaGGCTTCTGCCTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKKNGGG*ASASCV
Trigger: GACACAGGAGGCAGAAGCCCATCCTCCTCCATTTTT...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATGTGCCTACAGCAAAGTaGATTCTTCCAGAAGCGGTA +
Preference number: 4 (lower is better)
Translates to: AEDLETCRLMLHSIAASNVPTAK*ILPEAV
Trigger: TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCAC...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACCTCGAGTGTGAAGTATaGTTAGCTCTACTCTCCATA +
Preference number: 4 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNLECEV*LALLSI
Trigger: TATGGAGAGTAGAGCTAACCATACTTCACACTCGAG...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCATTCTACTGGGCAGTTTaGGGGAAAATATTGACGATA +
Preference number: 4 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSFYWAV*GKILTI
Trigger: TATCGTCAATATTTTCCCCCAAACTGCCCAGTAGAA...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCATTCAACCCACTATTTTaGTTTGACCACGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSFNPLF*FDHGFV
Trigger: AACAAACCCGTGGTCAAACCAAAATAGTGGGTTGAA...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAAGGTATGTTTTCCTTATaGCTACACTGCCTCCTACAG +
Preference number: 4 (lower is better)
Translates to: GRRPRNMQANATLYCSFKGMFSL*LHCLLQ
Trigger: CTGTAGGAGGCAGTGTAGCCATAAGGAAAACATACC...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549919.1
3UTR CAA 72 bp GTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTaGCCATGCCTGAATGGACACTCTGACTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VYHSLVTLNPNC*PCLNGHSDFLS
Trigger: TGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR CAA 72 bp TTTGCATTCTGCTTGCCATTTGTTACAGTTTTCCCATaGCATTCTCTGTCTACGCTCGGGCTCTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: FAFCLPFVTVFP*HSLSTLGLFKP
Trigger: TGGTTTGAAGAGCCCGAGCGTAGACAGAGAATGCAATGGGAAAACTGTAACAAATGGCAAGCAGAATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp ATATTTTTAGCACTGTCTGCAATAATCCACCATAAATCCCTGAGCGGAGACATTTCTGGGAGAAGGTCCTaGTTAGTCTTGATAGCACGG +
Preference number: 4 (lower is better)
Translates to: IFLALSAIIHHKSLSGDISGRRS*LVLIAR
Trigger: CCGTGCTATCAAGACTAATCAGGACCTTCTCCCAGA...AATGTCTCCGCTCAGGGATTTATGGTGGATTATTGCAGACAGTGCTAAAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR TCA 90 bp TGTATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACTCTGGGAGAAGGTCCTaGTTAGTCTTGATAGCACGG +
Preference number: 4 (lower is better)
Translates to: CIHISCSKDIGSKEAVGYSGRRS*LVLIAR
Trigger: CCGTGCTATCAAGACTAATCAGGACCTTCTCCCAGA...GTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp GGACTCACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGGACATCATAAACTGCTaGAACTGCGAGAACAGTCAC +
Preference number: 4 (lower is better)
Translates to: GLTLRVYHSLVTLNPNCLDIINC*NCENSH
Trigger: GTGACTGTTCTCGCAGTTTCAGCAGTTTATGATGTC...CAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGTGAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR TCA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTATTGACCAATCAAAACTaGGGGTATCTGGACATAGCA +
Preference number: 4 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVLTNQN*GYLDIA
Trigger: TGCTATGTCCAGATACCCTCAGTTTTGATTGGTCAA...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTAAGCTGGGTTCTCTGTaGTACATCGTTTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETKLGSL*YIVFNA
Trigger: GGCATTAAAAACGATGTATCACAGAGAACCCAGCTT...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp GGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAATGAACAAAATCTGTaGCTTACACACCCACCCCTC +
Preference number: 4 (lower is better)
Translates to: GSVLSALVYSLWVTMTSSNEQNL*LTHPPL
Trigger: GAGGGGTGGGTGTGTAAGTCACAGATTTTGTTCATT...GGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTTGATTGTTTGCCATGCCTaGATGGACACTCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: DLETCRLMLHSIAASNKLIVCHA*MDTLTS
Trigger: GGAAGTCAGAGTGTCCATTCAGGCATGGCAAACAAT...CAACTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCACATCAGTTAACAATTTaGGATACACGGTACTTCTGT +
Preference number: 4 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSHQLTI*DTRYFC
Trigger: ACAGAAGTACCGTGTATCTCAAATTGTTAACTGATG...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR GCA 90 bp AAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCGGTAGGACTTGTGGCTaGCACTGTGGGTTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KRFCFKCSGLQSMGNNDIGRTCG*HCGLEE
Trigger: CTCTTCTAACCCACAGTGGCAGCCACAAGTCCTACC...GATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR GCA 90 bp AGTAAACTTGTCTTGTGCTCTATATTTTTAGCACTGTCTGCAATAATCCACCATTCGTCCCACGATTCCTaGCACTGCCTCCGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SKLVLCSIFLALSAIIHHSSHDS*HCLRVN
Trigger: ATTCACACGGAGGCAGTGGCAGGAATCGTGGGACGA...ATGGTGGATTATTGCAGACAGTGCTAAAAATATAGAGCACAAGACAAGTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR GCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTTTACAGTTTTCCCATTaGATTCTCTGTCTACGCTCG +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETLQFSH*ILCLRS
Trigger: CGAGCGTAGACAGAGAATGCAATGGGAAAACTGTAA...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCTGTCAGCCATGTTGCTaGGGTAGTACAAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCCQPCC*GSTKHF
Trigger: GAAATGCTTTGTACTACCGCAGCAACATGGCTGACA...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGTGTCAGCCATGTTGCTaGGGTAGTACAAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLCQPCC*GSTKHF
Trigger: GAAATGCTTTGTACTACCGCAGCAACATGGCTGACA...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp GACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTTGGCATGTCAGCCATGTTaGTGCGGTAGTACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: DLETCRLMLHSIAASNKLACQPC*CGSTKH
Trigger: ATGCTTTGTACTACCGCAGCAACATGGCTGACATGC...CAACTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGGTGCTTCTGCAAACCTaGTGTTCTCCTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKVLLQT*CSPGEV
Trigger: TACTTCTCCAGGAGAACAGCAGGTTTGCAGAAGCAC...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp GACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTTGGTGCTTCTGCAAACCTaGTGTTCTCCTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: DLETCRLMLHSIAASNKLVLLQT*CSPGEV
Trigger: TACTTCTCCAGGAGAACAGCAGGTTTGCAGAAGCAC...CAACTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCTTTTGCCATCTCAGCTaGTTCTATGAGACGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCFCHLS*FYETSF
Trigger: GAAGCTCGTCTCATAGAAGCAGCTGAGATGGCAAAA...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGCATTCATAATACTTCTCAGCTaGTTCATTGAGGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLTLLGNWCHKKCLNCAFIILLS*FIEASL
Trigger: CAGGCTAGCCTCAATGAAGCAGCTGAGAAGTATTAT...GAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR GCA 90 bp TTTTCTACTTTGGATGCAAAGCTGGACTTAGTCTCTGAGTTCTGGTACTCCACATGGTGTCACAAGAAGTaGCTCAACTGTGCATTCAGT +
Preference number: 4 (lower is better)
Translates to: FSTLDAKLDLVSEFWYSTWCHKK*LNCAFS
Trigger: ACTGAATGCACAGTTGAGGCACTTCTTGTGACACCA...TGTGGAGTACCAGAACTCAGAGACTAAGTCCAGCTTTGCATCCAAAGTAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR GCA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAAGGTAACAATCAAGTaGTGGAATTTTGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNKVTIK*WNFARR
Trigger: CCTTCTGGCAAAATTCCAGCACTTGATTGTTACCTT...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CCA 90 bp AGAAGCACAAAACACCTTCCCTTTTGTCTAATAACCTGTTGGTTAGTTATTGGATTGTGGCTGCCACTGTaGGTTAGAAGAGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: RSTKHLPFCLITCWLVIGLWLPL*VRRVPQ
Trigger: TTGGGGGACTCTTCTAACCCACAGTGGCAGCCACAA...TCCAATAACTAACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTTGTGCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAACTGCCTCCGTGTGAATaGGGTGAGAAGCAAACATCA +
Preference number: 4 (lower is better)
Translates to: IQLECEVWLALLSISFSELPPCE*GEKQTS
Trigger: TGATGTTTGCTTCTCACCCCATTCACACGGAGGCAG...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGCGAGTTGGAAAAGCTTaGTGGTTTGTTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: CFKCSGLQSMGNNDILQERVGKA*WFVSHP
Trigger: TGGATGGGAAACAAACCACCAAGCTTTTCCAACTCG...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAACGGGGTTGTCCGAGTTaGAAAAGCTTGGTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: QLLFNGEADHIYMECERERGCPS*KSLVVC
Trigger: ACAAACCACCAAGCTTTTCCAACTCGGACAACCCCG...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTTTAGTCTCTGAGTTCTaGTACTCCACATCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETLVSEF*YSTSER
Trigger: CCTTTCAGATGTGGAGTACCAGAACTCAGAGACTAA...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp CAGCCCTGTAGTGAAAAGTGTCAGGGACATTTAGTTATTAATGATCCGTGCATTTCCGTAGAAGGAAGCTaGGTTCTCTGTGATACATCG +
Preference number: 4 (lower is better)
Translates to: QPCSEKCQGHLVINDPCISVEGS*VLCDTS
Trigger: CGATGTATCACAGAGAACCCAGCTTCCTTCTACGGA...AATGCACGGATCATTAATAACTAAATGTCCCTGACACTTTTCACTACAGGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGTGGGGCAAACTGCCTTaGCATTTTCTGAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: CFKCSGLQSMGNNDILQEWGKLP*HFLNCF
Trigger: GAAGCAATTCAGAAAATGCCAAGGCAGTTTGCCCCA...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCTATAGGCGCTGGATGTGGTCAGTCTTaGATCTCAGTGATTCCATAT +
Preference number: 4 (lower is better)
Translates to: IKHVSHVAAVVQSISIGAGCGQS*ISVIPY
Trigger: ATATGGAATCACTGAGATCCAAGACTGACCACATCC...AGCGCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR CCA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATACTGGTTTACAGTCTATaGGTAACAATGACATCCTCC +
Preference number: 4 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNILVYSL*VTMTSS
Trigger: GGAGGATGTCATTGTTACCCATAGACTGTAAACCAG...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTACTGGTTTACAGTCTATaGGTAACAATGACATCCTCC +
Preference number: 4 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVLVYSL*VTMTSS
Trigger: GGAGGATGTCATTGTTACCCATAGACTGTAAACCAG...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp AGTAAACTTGTCTTGTGCTCTATATTTTTAGCACTGTCTGCAATAATCCACCATCAACCGGCGGCTCACTaGGACTCACACTACGTGTTT +
Preference number: 4 (lower is better)
Translates to: SKLVLCSIFLALSAIIHHQPAAH*DSHYVF
Trigger: AAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTG...ATGGTGGATTATTGCAGACAGTGCTAAAAATATAGAGCACAAGACAAGTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CCA 90 bp AAGTGTTCTAAGCTTCAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAAGCATGTGCAGGTATTaGGCAGGGTTCAAAACATTC +
Preference number: 4 (lower is better)
Translates to: KCSKLQKLISRLSQTGKTSMCRY*AGFKTF
Trigger: GAATGTTTTGAACCCTGCCCAATACCTGCACATGCT...TGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGAACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549919.1
3UTR CAA 72 bp TCTGGTACTCCACATCTGAAAGGCAGCTATGTCCATTaGCATTCTGCTTGCCATTTGTTACAGTTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SGTPHLKGSYVH*HSACHLLQFSH
Trigger: ATGGGAAAACTGTAACAAATGGCAAGCAGAATGCAAATGGACATAGCTGCCTTTCAGATGTGGAGTACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
3UTR CAA 72 bp AGTGATTCCATATACCAATGCTCTGCTTCGGGGAGTTaGCTTAAACGCATATATGCTTCACCCATCATGTTG +
Preference number: 4 (lower is better)
Translates to: SDSIYQCSASGS*LKRIYASPIML
Trigger: CAACATGATGGGTGAAGCATATATGCGTTTAAGCAAACTCCCCGAAGCAGAGCATTGGTATATGGAATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGTTGACCAATCAAAACTaGGGGTATCTGGACATAGCA +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLLTNQN*GYLDIA
Trigger: TGCTATGTCCAGATACCCTCAGTTTTGATTGGTCAA...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp TGTATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAGTCACAAACTGTTTTaGGCAGAGGCACAGCATCCA +
Preference number: 4 (lower is better)
Translates to: CIHISCSKDIGSKEAVGYSHKLF*AEAQHP
Trigger: TGGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACT...GTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp TGTATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACGAGCTCTTGTGTGCATaGGGGTCCTTTAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: CIHISCSKDIGSKEAVGYELLCA*GSFRFS
Trigger: TGAAAACCTAAAGGACCCTCATGCACACAAGAGCTC...GTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp TTTTCTACTTTGGATGCAAAGCTGGACTTAGTCTCTGAGTTCTGGTACTCCACACATACAACTCGAGTGTaGAGTATGGTTAGCTCTACT +
Preference number: 4 (lower is better)
Translates to: FSTLDAKLDLVSEFWYSTHTTRV*SMVSST
Trigger: AGTAGAGCTAACCATACTTCACACTCGAGTTGTATG...TGTGGAGTACCAGAACTCAGAGACTAAGTCCAGCTTTGCATCCAAAGTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATTATATACATGGAGTGTaGAAGGGAAGGAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: AEDLETCRLMLHSIAASNYIHGV*KGRRNR
Trigger: CCTGTTTCTCCTTCCCTTTCACACTCCATGTATATA...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp AAGTGTTCTAAGCTTCAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACACACTGCCTCCTACAGTaGTATATTTATATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KCSKLQKLISRLSQTGKTHCLLQ*YIYMVL
Trigger: CAGCACCATATAAATATATCACTGTAGGAGGCAGTG...TGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGAACACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR TCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGTTTTGCCAGAAGGAATaGGCTACAACTCAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: CFKCSGLQSMGNNDILQEFCQKE*ATTQCL
Trigger: TAAGCACTGAGTTGTAGCTCATTCCTTCTGGCAAAA...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR GCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGGCCGCCAAGGCAGCTaGTGCACATTCAATGTTTAT +
Preference number: 4 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNGRQGS*CTFNVY
Trigger: ATAAACATTGAATGTGCAGCAGCTGCCTTGGCGGCC...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR GCA 90 bp ATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAAGGCCGCCAAGGCAGCTaGTGCACATTCAATGTTTAT +
Preference number: 4 (lower is better)
Translates to: IHISCSKDIGSKEAVGYKGRQGS*CTFNVY
Trigger: ATAAACATTGAATGTGCAGCAGCTGCCTTGGCGGCC...TTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp ATATTTTTAGCACTGTCTGCAATAATCCACCATAAATCCCTGAGCGGAGACATTCCAGTGACTGCTGCATaGAACAGGACATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: IFLALSAIIHHKSLSGDIPVTAA*NRTLTR
Trigger: TCTTGTCAATGTCCTGTTGCATGCAGCAGTCACTGG...AATGTCTCCGCTCAGGGATTTATGGTGGATTATTGCAGACAGTGCTAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR GCA 90 bp TGTATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACGCATGTCAGCCATGTTaGTGCGGTAGTACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: CIHISCSKDIGSKEAVGYACQPC*CGSTKH
Trigger: ATGCTTTGTACTACCGCAGCAACATGGCTGACATGC...GTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp TGTATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACGTGCTTCTGCAAACCTaGTGTTCTCCTGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: CIHISCSKDIGSKEAVGYVLLQT*CSPGEV
Trigger: TACTTCTCCAGGAGAACAGCAGGTTTGCAGAAGCAC...GTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp TTTTCTACTTTGGATGCAAAGCTGGACTTAGTCTCTGAGTTCTGGTACTCCACACAACATCAAACTCTGTaGTGTCTAGTTCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FSTLDAKLDLVSEFWYSTQHQTL*CLVQLL
Trigger: AAGCAGCTGAACTAGACAGCACAGAGTTTGATGTTG...TGTGGAGTACCAGAACTCAGAGACTAAGTCCAGCTTTGCATCCAAAGTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR GCA 90 bp GGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCCAACATCAAACTCTGTaGTGTCTAGTTCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GSVLSALVYSLWVTMTSSQHQTL*CLVQLL
Trigger: AAGCAGCTGAACTAGACAGCACAGAGTTTGATGTTG...GGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp GGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCATAATACTTCTCAGCTaGTTCATTGAGGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSVLSALVYSLWVTMTSSIILLS*FIEASL
Trigger: CAGGCTAGCCTCAATGAAGCAGCTGAGAAGTATTAT...GGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp ATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCTATAGGCGCTGTTAGTTATTGGAACTaGAAGGCTTACAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: IKHVSHVAAVVQSISIGAVSYWN*KAYKLL
Trigger: GAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAAC...AGCGCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR GCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGGAAGACCTAGAAACATaGAGGCTAATGCTACACTCT +
Preference number: 4 (lower is better)
Translates to: CFKCSGLQSMGNNDILQEEDLET*RLMLHS
Trigger: AGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp GCCCTAAATTATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCGAAGACCTAGAAACATaGAGGCTAATGCTACACTCT +
Preference number: 4 (lower is better)
Translates to: ALNYKACQPCCCGSTKHFEDLET*RLMLHS
Trigger: AGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC...GAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAATTTAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR GCA 90 bp GGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCATTAACAAAAGCATGTaGAGGTATTGGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GSVLSALVYSLWVTMTSSINKSM*RYWAGF
Trigger: GAACCCTGCCCAATACCTGCACATGCTTTTGTTAAT...GGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR GCA 90 bp ACAATGACATCCTCCAGGAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTTTAACCACAAAGGTCTaGCTAGAGATTCAACAAAAT +
Preference number: 4 (lower is better)
Translates to: TMTSSRRFPAFPFLVLTALTTKV*LEIQQN
Trigger: ATTTTGTTGAATCTCTAGGCAGACCTTTGTGGTTAA...AGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTCCTGGAGGATGTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CCA 90 bp TGTATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACCGTCCATGGAGTTTCTaGGAGAAGGTCCTGATTAGT +
Preference number: 4 (lower is better)
Translates to: CIHISCSKDIGSKEAVGYRPWSF*EKVLIS
Trigger: ACTAATCAGGACCTTCTCCCAGAAACTCCATGGACG...GTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp TGTATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACGAAAATGTGCGTCCATaGAGTTTCTGGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: CIHISCSKDIGSKEAVGYENVRP*SFWEKV
Trigger: GACCTTCTCCCAGAAACTCCATGGACGCACATTTTC...GTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGAACCCTCCAATGGCATaGTTCAGGCGAAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKNPPMA*FRRKER
Trigger: TCTTTCTTTTCGCCTGAACCATGCCATTGGAGGGTT...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGATTCAACCCTCCAATaGCATGGTTCAGGCGAAAAG +
Preference number: 4 (lower is better)
Translates to: QLLFNGEADHIYMECEREDSTLQ*HGSGEK
Trigger: CTTTTCGCCTGAACCATGCCATTGGAGGGTTGAATC...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp CGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCCTGAATTTAGTCTCTGAGTTCTaGTACTCCACATCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: RVYHSLVTLNPNCLPCLNLVSEF*YSTSER
Trigger: CCTTTCAGATGTGGAGTACCAGAACTCAGAGACTAA...ATTCAGGCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GCCCTAAATTATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCAACCTGCTGTTCTCCTaGAGAAGTAGCCCTAAATTA +
Preference number: 4 (lower is better)
Translates to: ALNYKACQPCCCGSTKHFNLLFS*RSSPKL
Trigger: TAATTTAGGGCTACTTCTCCAGGAGAACAGCAGGTT...GAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAATTTAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR CCA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTTCTTCCGTCCTTCCTTaGTTCATTAGAATAATACCG +
Preference number: 4 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETSSVLP*FIRIIP
Trigger: CGGTATTATTCTAATGAACCAAGGAAGGACGGAAGA...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGTTGTACAAGCTCTGTaGGGCAAACTGCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNVVQAL*GKLPWH
Trigger: ATGCCAAGGCAGTTTGCCCCACAGAGCTTGTACAAC...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAAGTTGTACAAGCTCTGTaGGGCAAACTGCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKVVQAL*GKLPWH
Trigger: ATGCCAAGGCAGTTTGCCCCACAGAGCTTGTACAAC...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTATTCTACTGGGCAGTTTaGGGGAAAATATTGACGATA +
Preference number: 4 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVFYWAV*GKILTI
Trigger: TATCGTCAATATTTTCCCCCAAACTGCCCAGTAGAA...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCATGTCTAATAACCTGTTaGTTAGTTATTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSCLITC*LVIGTA
Trigger: TGCAGTTCCAATAACTAACCAACAGGTTATTAGACA...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAATCAGTTGCAAAGAACTaGCTTAATGCATCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: QKLISRLSQTGKTAALGQSVAKN*LNASSF
Trigger: AAAACTTGATGCATTAAGCCAGTTCTTTGCAACTGA...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TGTATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACGACATCATAAACTGCTaGAACTGCGAGAACAGTCAC +
Preference number: 4 (lower is better)
Translates to: CIHISCSKDIGSKEAVGYDIINC*NCENSH
Trigger: GTGACTGTTCTCGCAGTTTCAGCAGTTTATGATGTC...GTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTTGACCAATCAAAACTaGGGGTATCTGGACATAGCA +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKLTNQN*GYLDIA
Trigger: TGCTATGTCCAGATACCCTCAGTTTTGATTGGTCAA...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp CAGCCCTGTAGTGAAAAGTGTCAGGGACATTTAGTTATTAATGATCCGTGCATTAAGCTGGGTTCTCTGTaGTACATCGTTTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: QPCSEKCQGHLVINDPCIKLGSL*YIVFNA
Trigger: GGCATTAAAAACGATGTATCACAGAGAACCCAGCTT...AATGCACGGATCATTAATAACTAAATGTCCCTGACACTTTTCACTACAGGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR TCA 90 bp ATTATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCTATAGGCAGTCTTGGATCTCAGTaGTTCCATATACCAATGCTC +
Preference number: 4 (lower is better)
Translates to: IIKHVSHVAAVVQSISIGSLGSQ*FHIPML
Trigger: GAGCATTGGTATATGGAATCACTGAGATCCAAGACT...GCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGCATGTGGGCAGCATTaGAGACAACATCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNACGQH*RQHQTL
Trigger: CAGAGTTTGATGTTGTCTTCAATGCTGCCCACATGC...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAAAGCCTTGTTTTTCCATaGTGTTCCACAGTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: IQLECEVWLALLSISFSESLVFP*CSTVCG
Trigger: TCCGCAAACTGTGGAACATCATGGAAAAACAAGGCT...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAACCTGAATGGACACTCTaGCTTCCTCTCACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKPEWTL*LPLTVF
Trigger: AAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGG...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp AGAAGCACAAAACACCTTCCCTTTTGTCTAATAACCTGTTGGTTAGTTATTGGACCAGTGACTGCTGCATaGAACAGGACATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: RSTKHLPFCLITCWLVIGPVTAA*NRTLTR
Trigger: TCTTGTCAATGTCCTGTTGCATGCAGCAGTCACTGG...TCCAATAACTAACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTTGTGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR GCA 90 bp ATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAAGAAGAGACCAGTGACTaGTGCATGCAACAGGACATT +
Preference number: 4 (lower is better)
Translates to: IHISCSKDIGSKEAVGYKEETSD*CMQQDI
Trigger: AATGTCCTGTTGCATGCAGCAGTCACTGGTCTCTTC...TTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGCATTCCAGCTTCAGAAATTTTaGTCTGACTCTTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: LLTLLGNWCHKKCLNCAFQLQKF*SDSSEH
Trigger: ATGTTCTGAAGAGTCAGAGCAAAATTTCTGAAGCTG...GAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR GCA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAATGTCAGCCATGTTGCTaGGGTAGTACAAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: IQLECEVWLALLSISFSECQPCC*GSTKHF
Trigger: GAAATGCTTTGTACTACCGCAGCAACATGGCTGACA...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAACCTAATTGTTTGCCATaGCTGAATGGACACTCTGAC +
Preference number: 4 (lower is better)
Translates to: IQLECEVWLALLSISFSEPNCLP*LNGHSD
Trigger: GTCAGAGTGTCCATTCAGGCATGGCAAACAATTAGG...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGGAAGACCTAGAAACATaGAGGCTAATGCTACACTCT +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKEDLET*RLMLHS
Trigger: AGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp AGAAGCACAAAACACCTTCCCTTTTGTCTAATAACCTGTTGGTTAGTTATTGGAGAAAATGTGCGTCCATaGAGTTTCTGGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RSTKHLPFCLITCWLVIGENVRP*SFWEKV
Trigger: GACCTTCTCCCAGAAACTCCATGGACGCACATTTTC...TCCAATAACTAACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTTGTGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp AAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCGAAAATGTGCGTCCATaGAGTTTCTGGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: KRFCFKCSGLQSMGNNDIENVRP*SFWEKV
Trigger: GACCTTCTCCCAGAAACTCCATGGACGCACATTTTC...GATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAAAACCCTCCAATGGCATaGTTCAGGCGAAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: IQLECEVWLALLSISFSENPPMA*FRRKER
Trigger: TCTTTCTTTTCGCCTGAACCATGCCATTGGAGGGTT...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CCA 90 bp ATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCAGAGGTTCTTGGTTaGCAAGTAGAAGAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: IHISCSKDIGSKEAVGYKPEVLG*QVEEGE
Trigger: CTCACCTTCTTCTACTTGCCAACCAAGAACCTCTGG...TTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAAACAGCCAGAGGTTCTTaGTTGGCAAGTAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKTARGS*LASRRR
Trigger: CCTTCTTCTACTTGCCAACCAAGAACCTCTGGCTGT...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTTAGTCTCTGAGTTCTaGTACTCCACATCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKLVSEF*YSTSER
Trigger: CCTTTCAGATGTGGAGTACCAGAACTCAGAGACTAA...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAATCCGTAGAAGGAAGCTaGGTTCTCTGTGATACATCG +
Preference number: 4 (lower is better)
Translates to: IHISCSKDIGSKEAVGYKSVEGS*VLCDTS
Trigger: CGATGTATCACAGAGAACCCAGCTTCCTTCTACGGA...TTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGAACCTGCTGTTCTCCTaGAGAAGTAGCCCTAAATTA +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKNLLFS*RSSPKL
Trigger: TAATTTAGGGCTACTTCTCCAGGAGAACAGCAGGTT...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp AAGTGTTCTAAGCTTCAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACATCTTCCGTCCTTCCTTaGTTCATTAGAATAATACCG +
Preference number: 4 (lower is better)
Translates to: KCSKLQKLISRLSQTGKTSSVLP*FIRIIP
Trigger: CGGTATTATTCTAATGAACCAAGGAAGGACGGAAGA...TGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGAACACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp AGTAAACTTGTCTTGTGCTCTATATTTTTAGCACTGTCTGCAATAATCCACCATGTTGTACAAGCTCTGTaGGGCAAACTGCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SKLVLCSIFLALSAIIHHVVQAL*GKLPWH
Trigger: ATGCCAAGGCAGTTTGCCCCACAGAGCTTGTACAAC...ATGGTGGATTATTGCAGACAGTGCTAAAAATATAGAGCACAAGACAAGTTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGTGCCTACAGCAAAGTaGATTCTTCCAGAAGCGGTA +
Preference number: 4 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNVPTAK*ILPEAV
Trigger: TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCAC...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAACTGTTGGTTAGTTATTaGAACTGCAAGGCTTACAAA +
Preference number: 4 (lower is better)
Translates to: GRRPRNMQANATLYCSFKLLVSY*NCKAYK
Trigger: TTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAG...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp CGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCCTGAATTCAGAAATTTTGCTCTaGCTCTTCAGAACATTTCCA +
Preference number: 4 (lower is better)
Translates to: RVYHSLVTLNPNCLPCLNSEILL*LFRTFP
Trigger: TGGAAATGTTCTGAAGAGTCAGAGCAAAATTTCTGA...ATTCAGGCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGTCAGAAATTTTGCTCTaGCTCTTCAGAACATTTCCA +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLSEILL*LFRTFP
Trigger: TGGAAATGTTCTGAAGAGTCAGAGCAAAATTTCTGA...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR TCA 90 bp AGTAAACTTGTCTTGTGCTCTATATTTTTAGCACTGTCTGCAATAATCCACCATGCATGTGGGCAGCATTaGAGACAACATCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: SKLVLCSIFLALSAIIHHACGQH*RQHQTL
Trigger: CAGAGTTTGATGTTGTCTTCAATGCTGCCCACATGC...ATGGTGGATTATTGCAGACAGTGCTAAAAATATAGAGCACAAGACAAGTTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR TCA 90 bp TTTTCTACTTTGGATGCAAAGCTGGACTTAGTCTCTGAGTTCTGGTACTCCACAAAACATAGCAGATTCTaGCAGATCTTGACACAGTAT +
Preference number: 4 (lower is better)
Translates to: FSTLDAKLDLVSEFWYSTKHSRF*QILTQY
Trigger: ATACTGTGTCAAGATCTGTCAGAATCTGCTATGTTT...TGTGGAGTACCAGAACTCAGAGACTAAGTCCAGCTTTGCATCCAAAGTAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAACATACAACTCGAGTGTaGAGTATGGTTAGCTCTACT +
Preference number: 4 (lower is better)
Translates to: IQLECEVWLALLSISFSEHTTRV*SMVSST
Trigger: AGTAGAGCTAACCATACTTCACACTCGAGTTGTATG...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAACATACAACTCGAGTGTaGAGTATGGTTAGCTCTACT +
Preference number: 4 (lower is better)
Translates to: QLLFNGEADHIYMECEREHTTRV*SMVSST
Trigger: AGTAGAGCTAACCATACTTCACACTCGAGTTGTATG...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGGTACCCATTAGAAAGTaGTTAACATTCGATACCTAC +
Preference number: 4 (lower is better)
Translates to: CFKCSGLQSMGNNDILQEVPIRK*LTFDTY
Trigger: GTAGGTATCGAATGTTAATCACTTTCTAATGGGTAC...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAATATATACATGGAGTGTaGAAGGGAAGGAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: IQLECEVWLALLSISFSEYIHGV*KGRRNR
Trigger: CCTGTTTCTCCTTCCCTTTCACACTCCATGTATATA...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp GGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCACAACTCAGTGCTTATaGATTAATCACATCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GSVLSALVYSLWVTMTSSTTQCL*INHIRE
Trigger: CTCTCTGATGTGATTAATTCATAAGCACTGAGTTGT...GGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR GCA 90 bp GGACTCACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCATTTGCATTCTGCTTaGCATTTGTTACAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GLTLRVYHSLVTLNPNCLHLHSA*HLLQFS
Trigger: GGAAAACTGTAACAAATGGCAAGCAGAATGCAAATG...CAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGTGAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCCATTTGCATTCTGCTTaGCATTTGTTACAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCHLHSA*HLLQFS
Trigger: GGAAAACTGTAACAAATGGCAAGCAGAATGCAAATG...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGCAGCTTCAGAAATTTTaGTCTGACTCTTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLQLQKF*SDSSEH
Trigger: ATGTTCTGAAGAGTCAGAGCAAAATTTCTGAAGCTG...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAATGTCAGCCATGTTGCTaGGGTAGTACAAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKCQPCC*GSTKHF
Trigger: GAAATGCTTTGTACTACCGCAGCAACATGGCTGACA...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATCCTAATTGTTTGCCATaGCTGAATGGACACTCTGAC +
Preference number: 4 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNPNCLP*LNGHSD
Trigger: GTCAGAGTGTCCATTCAGGCATGGCAAACAATTAGG...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGGTTAGTTATTGGAACTaGAAGGCTTACAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKVSYWN*KAYKLL
Trigger: GAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAAC...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp CGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCCTGAATTTAAACCATCCAAGTTaGCACTCGATAGATCTTTAC +
Preference number: 4 (lower is better)
Translates to: RVYHSLVTLNPNCLPCLNLNHPS*HSIDLY
Trigger: GTAAAGATCTATCGAGTGGCAACTTGGATGGTTTAA...ATTCAGGCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CCA 90 bp GACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTTGTCTTCCGTCCTTCCTTaGTTCATTAGAATAATACCG +
Preference number: 4 (lower is better)
Translates to: DLETCRLMLHSIAASNKLSSVLP*FIRIIP
Trigger: CGGTATTATTCTAATGAACCAAGGAAGGACGGAAGA...CAACTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATTGGGGCAAACTGCCTTaGCATTTTCTGAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNWGKLP*HFLNCF
Trigger: GAAGCAATTCAGAAAATGCCAAGGCAGTTTGCCCCA...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAACTGGTTTACAGTCTATaGGTAACAATGACATCCTCC +
Preference number: 4 (lower is better)
Translates to: QLLFNGEADHIYMECERELVYSL*VTMTSS
Trigger: GGAGGATGTCATTGTTACCCATAGACTGTAAACCAG...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGCATTCAAACATTATGTGCACTaGTCAAGAAACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LLTLLGNWCHKKCLNCAFKHYVH*SRNIAD
Trigger: ATCTGCTATGTTTCTTGACCAGTGCACATAATGTTT...GAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CCA 90 bp ATTATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCTATAGGCTTCTACTGGGCAGTTTaGGGGAAAATATTGACGATA +
Preference number: 4 (lower is better)
Translates to: IIKHVSHVAAVVQSISIGFYWAV*GKILTI
Trigger: TATCGTCAATATTTTCCCCCAAACTGCCCAGTAGAA...GCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR CCA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAAACACAAAATCACTaGCAAGCATCATCACACACT +
Preference number: 4 (lower is better)
Translates to: AEDLETCRLMLHSIAASNKTQNH*QASSHT
Trigger: AGTGTGTGATGATGCTTGCCAGTGATTTTGTGTTTT...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGATTATTAACGCTACTTaGGAACTGGTGTCACAAGAA +
Preference number: 4 (lower is better)
Translates to: CFKCSGLQSMGNNDILQEIINAT*ELVSQE
Trigger: TTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAAT...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CCA 90 bp AAGTGTTCTAAGCTTCAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGTAACAATCAAGTGCTaGAATTTTGCCAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: KCSKLQKLISRLSQTGKTVTIKC*NFARRN
Trigger: ATTCCTTCTGGCAAAATTCCAGCACTTGATTGTTAC...TGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGAACACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549919.1
3UTR CAA 72 bp CTCTGTGATACATCGTTTTTAATGCCATTTTCTACTTaGGATGCAAAGCTGGACTTAGTCTCTGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LCDTSFLMPFST*DAKLDLVSEFW
Trigger: CCAGAACTCAGAGACTAAGTCCAGCTTTGCATCCAAAGTAGAAAATGGCATTAAAAACGATGTATCACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATAAGCTGGGTTCTCTGTaGTACATCGTTTTTAATGCC +
Preference number: 4 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNKLGSL*YIVFNA
Trigger: GGCATTAAAAACGATGTATCACAGAGAACCCAGCTT...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp AAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCTATATACATGGAGTGTaGAAGGGAAGGAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: KRFCFKCSGLQSMGNNDIYIHGV*KGRRNR
Trigger: CCTGTTTCTCCTTCCCTTTCACACTCCATGTATATA...GATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATTTACAGTTTTCCCATTaGATTCTCTGTCTACGCTCG +
Preference number: 4 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNLQFSH*ILCLRS
Trigger: CGAGCGTAGACAGAGAATGCAATGGGAAAACTGTAA...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATCAACATCAAACTCTGTaGTGTCTAGTTCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNQHQTL*CLVQLL
Trigger: AAGCAGCTGAACTAGACAGCACAGAGTTTGATGTTG...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAAATAATACTTCTCAGCTaGTTCATTGAGGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKIILLS*FIEASL
Trigger: CAGGCTAGCCTCAATGAAGCAGCTGAGAAGTATTAT...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGAGGTTCTGTTTTAAGTaGTCTGGTTTACAGTCTATG +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKRFCFK*SGLQSM
Trigger: CATAGACTGTAAACCAGAGCACTTAAAACAGAACCT...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp AAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCTTAGTCTCTGAGTTCTaGTACTCCACATCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: KRFCFKCSGLQSMGNNDILVSEF*YSTSER
Trigger: CCTTTCAGATGTGGAGTACCAGAACTCAGAGACTAA...GATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAAAACCTGCTGTTCTCCTaGAGAAGTAGCCCTAAATTA +
Preference number: 4 (lower is better)
Translates to: IHISCSKDIGSKEAVGYKNLLFS*RSSPKL
Trigger: TAATTTAGGGCTACTTCTCCAGGAGAACAGCAGGTT...TTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAAGGATGTGGTCAGTCTTaGATCTCAGTGATTCCATAT +
Preference number: 4 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKGCGQS*ISVIPY
Trigger: ATATGGAATCACTGAGATCCAAGACTGACCACATCC...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCAAACATTATGTGCACTaGTCAAGAAACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCKHYVH*SRNIAD
Trigger: ATCTGCTATGTTTCTTGACCAGTGCACATAATGTTT...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp CAGCCCTGTAGTGAAAAGTGTCAGGGACATTTAGTTATTAATGATCCGTGCATTAAAACACAAAATCACTaGCAAGCATCATCACACACT +
Preference number: 4 (lower is better)
Translates to: QPCSEKCQGHLVINDPCIKTQNH*QASSHT
Trigger: AGTGTGTGATGATGCTTGCCAGTGATTTTGTGTTTT...AATGCACGGATCATTAATAACTAAATGTCCCTGACACTTTTCACTACAGGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CCA 90 bp TCTAATAACCTGTTGGTTAGTTATTGGAACTGCAAGGCTTACAAACTCCTCCCCTCAGTTGCAAAGAACTaGCTTAATGCATCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SNNLLVSYWNCKAYKLLPSVAKN*LNASSF
Trigger: AAAACTTGATGCATTAAGCCAGTTCTTTGCAACTGA...GGGGAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAGGTTATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
3UTR CAA 72 bp AAGCACAAAACACCTTCCCTTTTGTCTAATAACCTGTaGGTTAGTTATTGGAACTGCAAGGCTTACAAACTC +
Preference number: 4 (lower is better)
Translates to: KHKTPSLLSNNL*VSYWNCKAYKL
Trigger: GAGTTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTTGTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAATCAGAAATTTTGCTCTaGCTCTTCAGAACATTTCCA +
Preference number: 4 (lower is better)
Translates to: QLLFNGEADHIYMECERESEILL*LFRTFP
Trigger: TGGAAATGTTCTGAAGAGTCAGAGCAAAATTTCTGA...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAAAAACATAGCAGATTCTaGCAGATCTTGACACAGTAT +
Preference number: 4 (lower is better)
Translates to: IQLECEVWLALLSISFSEKHSRF*QILTQY
Trigger: ATACTGTGTCAAGATCTGTCAGAATCTGCTATGTTT...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR TCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGTACCCATTAGAAAGTaGTTAACATTCGATACCTAC +
Preference number: 4 (lower is better)
Translates to: QLLFNGEADHIYMECEREVPIRK*LTFDTY
Trigger: GTAGGTATCGAATGTTAATCACTTTCTAATGGGTAC...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAACATTTGCATTCTGCTTaGCATTTGTTACAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: QLLFNGEADHIYMECEREHLHSA*HLLQFS
Trigger: GGAAAACTGTAACAAATGGCAAGCAGAATGCAAATG...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp AGAAGCACAAAACACCTTCCCTTTTGTCTAATAACCTGTTGGTTAGTTATTGGAGTTAGTTATTGGAACTaGAAGGCTTACAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: RSTKHLPFCLITCWLVIGVSYWN*KAYKLL
Trigger: GAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAAC...TCCAATAACTAACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTTGTGCTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGAAACATTATGTGCACTaGTCAAGAAACATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: EDLETCRLMLHSIAASNKKHYVH*SRNIAD
Trigger: ATCTGCTATGTTTCTTGACCAGTGCACATAATGTTT...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAACTGTTGGTTAGTTATTaGAACTGCAAGGCTTACAAA +
Preference number: 4 (lower is better)
Translates to: QLLFNGEADHIYMECERELLVSY*NCKAYK
Trigger: TTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAG...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ATTATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCTATAGGCTCAGTTGCAAAGAACTaGCTTAATGCATCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: IIKHVSHVAAVVQSISIGSVAKN*LNASSF
Trigger: AAAACTTGATGCATTAAGCCAGTTCTTTGCAACTGA...GCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR TCA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAAAATGTTCAAAAGATGTaGACCAGATTTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKNVQKM*TRFASQ
Trigger: TTGGGAAGCAAATCTGGTTCACATCTTTTGAACATT...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR GCA 90 bp ATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACATTTGCATTCTGCTTaGCATTTGTTACAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: IHISCSKDIGSKEAVGYKHLHSA*HLLQFS
Trigger: GGAAAACTGTAACAAATGGCAAGCAGAATGCAAATG...TTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR GCA 90 bp AAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCAGCTTCAGAAATTTTaGTCTGACTCTTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: KRFCFKCSGLQSMGNNDIQLQKF*SDSSEH
Trigger: ATGTTCTGAAGAGTCAGAGCAAAATTTCTGAAGCTG...GATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATCAGCTTCAGAAATTTTaGTCTGACTCTTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNQLQKF*SDSSEH
Trigger: ATGTTCTGAAGAGTCAGAGCAAAATTTCTGAAGCTG...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR GCA 90 bp AGAAGCACAAAACACCTTCCCTTTTGTCTAATAACCTGTTGGTTAGTTATTGGAAGGTTCTGTTTTAAGTaGTCTGGTTTACAGTCTATG +
Preference number: 4 (lower is better)
Translates to: RSTKHLPFCLITCWLVIGRFCFK*SGLQSM
Trigger: CATAGACTGTAAACCAGAGCACTTAAAACAGAACCT...TCCAATAACTAACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTTGTGCTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CCA 90 bp ATATTTTTAGCACTGTCTGCAATAATCCACCATAAATCCCTGAGCGGAGACATTTGTCTAATAACCTGTTaGTTAGTTATTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: IFLALSAIIHHKSLSGDICLITC*LVIGTA
Trigger: TGCAGTTCCAATAACTAACCAACAGGTTATTAGACA...AATGTCTCCGCTCAGGGATTTATGGTGGATTATTGCAGACAGTGCTAAAAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CCA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAATAAACAGAAAGACCTaGTCAAATGACTGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: QLLFNGEADHIYMECEREINRKT*SNDCQK
Trigger: TTTCTGACAGTCATTTGACCAGGTCTTTCTGTTTAT...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CCA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATTTTCCTGCAACTAGATaGTTCCATGCATTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNFPATR*FHAFLL
Trigger: CAACAAAAATGCATGGAACCATCTAGTTGCAGGAAA...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CCA 90 bp AGTAAACTTGTCTTGTGCTCTATATTTTTAGCACTGTCTGCAATAATCCACCATTGTCTAATAACCTGTTaGTTAGTTATTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: SKLVLCSIFLALSAIIHHCLITC*LVIGTA
Trigger: TGCAGTTCCAATAACTAACCAACAGGTTATTAGACA...ATGGTGGATTATTGCAGACAGTGCTAAAAATATAGAGCACAAGACAAGTTTACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS GCA 90 bp GAGGGACAAGGCGAACCGCCTCCCCTCGCCGCCTCCCGGGCGCACTaGTCCGGTGTCGCTCGGGCGGACTCCGGCCGCCAAGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: EGQGEPPPLAASRAH*SGVARADSGRQGSC
Trigger: GCAGCTGCCTTGGCGGCCGGAGTCCGCCCGAGCGACACCGGAGCAGTGCGCCCGGGAGGCGGCGAGGGGAGGCGGTTCGCCTTGTCCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000551915.5
CDS TCA 90 bp GTGCGGGCTCACACCACACTCCCCATGCCCGGCGCCCGCAAGCGGTaGGCGGCGTTTGGGCTCCGCGTCCCCCGGCGGAAGCGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: VRAHTTLPMPGARKR*AAFGLRVPRRKRRA
Trigger: AGCCCTGCGCTTCCGCCGGGGGACGCGGAGCCCAAACGCCGCTCACCGCTTGCGGGCGCCGGGCATGGGGAGTGTGGTGTGAGCCCGCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000551915.5
CDS CCA 90 bp CACCACACTCCCCATGCCCGGCGCCCGCAAGCGGTGAGCGGCGTTTaGGCTCCGCGTCCCCCGGCGGAAGCGCAGGGCTGGTCTTTCGCG +
Preference number: 5 (lower is better)
Translates to: HHTPHARRPQAVSGV*APRPPAEAQGWSFA
Trigger: CGCGAAAGACCAGCCCTGCGCTTCCGCCGGGGGACGCGGAGCCCAAACGCCGCTCACCGCTTGCGGGCGCCGGGCATGGGGAGTGTGGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000551915.5
CDS CCA 90 bp GTGAGCGGCGTTTGGGCTCCGCGTCCCCCGGCGGAAGCGCAGGGCTaGTCTTTCGCGCGGGTCGCGATCCCCACCCTAACCCATGGCAGT +
Preference number: 5 (lower is better)
Translates to: VSGVWAPRPPAEAQG*SFARVAIPTLTHGS
Trigger: ACTGCCATGGGTTAGGGTGGGGATCGCGACCCGCGCGAAAGACCAGCCCTGCGCTTCCGCCGGGGGACGCGGAGCCCAAACGCCGCTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000551915.5
CDS GCA 90 bp GGTGTTGAGATACAAGGCGAGCCCCAGAGCGCTGCTCACCAACTCTaGAATCATCTCTCCACCGCCTTCCCTCCGGCTCGGCTCCCAGCG +
Preference number: 5 (lower is better)
Translates to: GVEIQGEPQSAAHQL*NHLSTAFPPARLPA
Trigger: CGCTGGGAGCCGAGCCGGAGGGAAGGCGGTGGAGAGATGATTGCAGAGTTGGTGAGCAGCGCTCTGGGGCTCGCCTTGTATCTCAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000548305.5
ENST00000551915.5
CDS GCA 90 bp GAAGAGACTGGCCCCGACATCGGCTCGTCCCACGATTCCTGCCACTaGCTCCGTGTGAATGGGGTGAGAAGCAAACATCAAGCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: EETGPDIGSSHDSCH*LRVNGVRSKHQASH
Trigger: ATGGCTGGCTTGATGTTTGCTTCTCACCCCATTCACACGGAGGCAGTGGCAGGAATCGTGGGACGAGCCGATGTCGGGGCCAGTCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000549919.1
ENST00000551915.5
CDS-3UTR CAA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCATGACATCGTCTGGCTaGAGCTGCAGGGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSMTSSG*SCRARR
Trigger: CCTGCGGGCCCTGCAGCTCAAGCCAGACGATGTCAT...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS GCA 90 bp GAGAAAGAAGAGACTGGCCCCGACATCGGCTCGTCCCACGATTCCTaGCACTGCCTCCGTGTGAATGGGGTGAGAAGCAAACATCAAGCC +
Preference number: 5 (lower is better)
Translates to: EKEETGPDIGSSHDS*HCLRVNGVRSKHQA
Trigger: GGCTTGATGTTTGCTTCTCACCCCATTCACACGGAGGCAGTGGCAGGAATCGTGGGACGAGCCGATGTCGGGGCCAGTCTCTTCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000549919.1
ENST00000551915.5
CDS-3UTR CAA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTAGCGGTGAGCGGCGTTaGGGCTCCGCGTCCCCCGGC +
Preference number: 5 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETSGERR*GSASPG
Trigger: GCCGGGGGACGCGGAGCCCAAACGCCGCTCACCGCT...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS GCA 90 bp CTGAAACTGCGAGAACAGTCACTCCTTGTTCCTTCCACAACATGCTaGATCCTGCGCACAGTCCTGACCCCAGGAACCAGCCCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LKLREQSLLVPSTTC*ILRTVLTPGTSPRF
Trigger: GAACCTGGGGCTGGTTCCTGGGGTCAGGACTGTGCGCAGGATGCAGCATGTTGTGGAAGGAACAAGGAGTGACTGTTCTCGCAGTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000549919.1
ENST00000551915.5
CDS-3UTR CAA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGAGCGGTGAGCGGCGTTaGGGCTCCGCGTCCCCCGGC +
Preference number: 5 (lower is better)
Translates to: CFKCSGLQSMGNNDILQESGERR*GSASPG
Trigger: GCCGGGGGACGCGGAGCCCAAACGCCGCTCACCGCT...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR CAA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCTTCTCAGCTGCTTCATaGAGGCTAGCCTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSFSAAS*RLACLS
Trigger: GCTCAGACAGGCTAGCCTCAATGAAGCAGCTGAGAA...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp CAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAGCAGCGTTAGGACAATCCGCACTCAGGGTGTaGAGATACAAGGCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: QKLISRLSQTGKTAALGQSALRV*RYKASP
Trigger: GGGGCTCGCCTTGTATCTCAACACCCTGAGTGCGGA...TTGTCCTAACGCTGCTGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CAA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGGCTTCACCCATCATGTaGTACAAGCTCTGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGASPIM*YKLCGA
Trigger: TGCCCCACAGAGCTTGTACAACATGATGGGTGAAGC...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS TCA 90 bp AAGTTCTTCCTCTGTCATCATAGCAGAAATCCGCACTCAGGGTGTTaGGATACAAGGCGAGCCCCAGAGCGCTGCTCACCAACTCTGCAA +
Preference number: 5 (lower is better)
Translates to: KFFLCHHSRNPHSGC*DTRRAPERCSPTLQ
Trigger: TTGCAGAGTTGGTGAGCAGCGCTCTGGGGCTCGCCTTGTATCTCAACACCCTGAGTGCGGATTTCTGCTATGATGACAGAGGAAGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR CAA 90 bp ATGACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTTTCTGGAGTCTGCCATaGAGGTGCAGAATGGCTCCC +
Preference number: 5 (lower is better)
Translates to: MTSALVLKSNTSSCHSTAFWSLP*RCRMAP
Trigger: GGGAGCCATTCTGCACCTCAATGGCAGACTCCAGAA...AGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCATGATGTTCCACAGTTaGCGGAGATTGGACTGTGTG +
Preference number: 5 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSMMFHS*RRLDCV
Trigger: CACACAGTCCAATCTCCGCAAACTGTGGAACATCAT...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS TCA 90 bp CTGCCTCCGTGTGAATGGGGTGAGAAGCAAACATCAAGCCAGCCATaGATGTCCAGTATCCATCACCAAGGAGGATCTTGGAGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: LPPCEWGEKQTSSQP*MSSIHHQGGSWRSL
Trigger: CAAGCTTCTCCAAGATCCTCCTTGGTGATGGATACTGGACATTCATGGCTGGCTTGATGTTTGCTTCTCACCCCATTCACACGGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000549919.1
ENST00000551915.5
CDS-3UTR CAA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGCTTGAGGAACCGCTTTaGGACTTTGACATAAAGGGC +
Preference number: 5 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGLEEPL*DFDIKG
Trigger: GCCCTTTATGTCAAAGTCCAAAAGCGGTTCCTCAAG...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGATGACATCGTCTGGCTaGAGCTGCAGGGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: CFKCSGLQSMGNNDILQEMTSSG*SCRARR
Trigger: CCTGCGGGCCCTGCAGCTCAAGCCAGACGATGTCAT...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGTCCGCACTCAGGGTGTaGAGATACAAGGCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLSALRV*RYKASP
Trigger: GGGGCTCGCCTTGTATCTCAACACCCTGAGTGCGGA...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCAGAATCAGCAGCGGGGTaGTCCGAGTTGGAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSESAAG*SELEKL
Trigger: AAGCTTTTCCAACTCGGACAACCCCGCTGCTGATTC...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGGTTACAGTTTTCCCATaGCATTCTCTGTCTACGCTC +
Preference number: 5 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGVTVFP*HSLSTL
Trigger: GAGCGTAGACAGAGAATGCAATGGGAAAACTGTAAC...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp GAGTTGGAAAAGCTTGGTGGTTTGTTTCCCATCCAGTATAACCGGGCACCCAAAGCTTCACCCATCATGTaGTACAAGCTCTGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: ELEKLGGLFPIQYNRAPKASPIM*YKLCGA
Trigger: TGCCCCACAGAGCTTGTACAACATGATGGGTGAAGC...TTTGGGTGCCCGGTTATACTGGATGGGAAACAAACCACCAAGCTTTTCCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR CAA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGTCTGCTTCGGGGAGTTaGCTTAAACGCATATATGCT +
Preference number: 5 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGSASGS*LKRIYA
Trigger: AGCATATATGCGTTTAAGCAAACTCCCCGAAGCAGA...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS GCA 90 bp ACCAAGGAGGATCTTGGAGAAGCTTGTGAAGAGACCAGTGACTGCTaGATGCAACAGGACATTGACAAGATGGTAGCTCCAGGGATTCAA +
Preference number: 5 (lower is better)
Translates to: TKEDLGEACEETSDC*MQQDIDKMVAPGIQ
Trigger: TTGAATCCCTGGAGCTACCATCTTGTCAATGTCCTGTTGCATGCAGCAGTCACTGGTCTCTTCACAAGCTTCTCCAAGATCCTCCTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000549919.1
ENST00000551915.5
CDS GCA 90 bp ATCACCAAGGAGGATCTTGGAGAAGCTTGTGAAGAGACCAGTGACTaGTGCATGCAACAGGACATTGACAAGATGGTAGCTCCAGGGATT +
Preference number: 5 (lower is better)
Translates to: ITKEDLGEACEETSD*CMQQDIDKMVAPGI
Trigger: AATCCCTGGAGCTACCATCTTGTCAATGTCCTGTTGCATGCAGCAGTCACTGGTCTCTTCACAAGCTTCTCCAAGATCCTCCTTGGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000549919.1
ENST00000551915.5
CDS-3UTR CAA 90 bp GAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGAGAACAGTCACTCCTaGTTCCTTCCACAACATGCT +
Preference number: 5 (lower is better)
Translates to: EVSGFPLFGVNSCAYSKVENSHS*FLPQHA
Trigger: AGCATGTTGTGGAAGGAACAAGGAGTGACTGTTCTC...CACTTTGCTGTAGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CAA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACGAATCAGCAGCGGGGTaGTCCGAGTTGGAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNESAAG*SELEKL
Trigger: AAGCTTTTCCAACTCGGACAACCCCGCTGCTGATTC...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp AGCGTTAGGACAACCGGCGGCTCACTGGGACTCACACTACGTGTTTATCACTCCGGTTTGACCACGGGTTaGTTGTTAAATATCATTCTG +
Preference number: 5 (lower is better)
Translates to: SVRTTGGSLGLTLRVYHSGLTTG*LLNIIL
Trigger: CAGAATGATATTTAACAACAAACCCGTGGTCAAACC...GGAGTGATAAACACGTAGTGTGAGTCCCAGTGAGCCGCCGGTTGTCCTAACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTGGGACCCACTATTTTGGTTaGACCACGGGTTTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: TSALVLKSNTSSCHSTAGTHYFG*TTGLLL
Trigger: TAACAACAAACCCGTGGTCAAACCAAAATAGTGGGT...CCCAGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAATCCGCACTCAGGGTGTaGAGATACAAGGCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: QLLFNGEADHIYMECERESALRV*RYKASP
Trigger: GGGGCTCGCCTTGTATCTCAACACCCTGAGTGCGGA...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CAA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTGAATCAGCAGCGGGGTaGTCCGAGTTGGAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETESAAG*SELEKL
Trigger: AAGCTTTTCCAACTCGGACAACCCCGCTGCTGATTC...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp ATGACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTTCTGCTTCGGGGAGTTaGCTTAAACGCATATATGCT +
Preference number: 5 (lower is better)
Translates to: MTSALVLKSNTSSCHSTASASGS*LKRIYA
Trigger: AGCATATATGCGTTTAAGCAAACTCCCCGAAGCAGA...AGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TCTAATAACCTGTTGGTTAGTTATTGGAACTGCAAGGCTTACAAACTCCTCCCCTTCTGGAGTCTGCCATaGAGGTGCAGAATGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SNNLLVSYWNCKAYKLLPFWSLP*RCRMAP
Trigger: GGGAGCCATTCTGCACCTCAATGGCAGACTCCAGAA...GGGGAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAGGTTATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATATGACATCGTCTGGCTaGAGCTGCAGGGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNMTSSG*SCRARR
Trigger: CCTGCGGGCCCTGCAGCTCAAGCCAGACGATGTCAT...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACCACAGTTTGCGGAGATaGGACTGTGTGATGACATCG +
Preference number: 5 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNHSLRR*DCVMTS
Trigger: CGATGTCATCACACAGTCCAATCTCCGCAAACTGTG...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATACCGGCTTTCCCCTTTTaGGTGTTAACAGCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNIPAFPF*VLTAVP
Trigger: AGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGG...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp AAGTGTTCTAAGCTTCAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACATTCTCAGCTGCTTCATaGAGGCTAGCCTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: KCSKLQKLISRLSQTGKTFSAAS*RLACLS
Trigger: GCTCAGACAGGCTAGCCTCAATGAAGCAGCTGAGAA...TGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGAACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ACAATGACATCCTCCAGGAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTCTTAACCCTAATTGTTaGCCATGCCTGAATGGACAC +
Preference number: 5 (lower is better)
Translates to: TMTSSRRFPAFPFLVLTALNPNC*PCLNGH
Trigger: GTGTCCATTCAGGCATGGCAAACAATTAGGGTTAAG...AGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTCCTGGAGGATGTCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCACTTAACCCTAATTGTTaGCCATGCCTGAATGGACAC +
Preference number: 5 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSLNPNC*PCLNGH
Trigger: GTGTCCATTCAGGCATGGCAAACAATTAGGGTTAAG...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp GACATCCTCCAGGAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTGTGCCTTGTCTAATAACCTGTaGGTTAGTTATTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: DILQEVSGFPLFGVNSCALSNNL*VSYWNC
Trigger: GCAGTTCCAATAACTAACCAACAGGTTATTAGACAA...GGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTCCTGGAGGATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp CTTCCAGAAGCGGTAGTGACCTCAATGACCTCTGCCCTGGTCTTGAAGTCTAACGGTTTGACCACGGGTTaGTTGTTAAATATCATTCTG +
Preference number: 5 (lower is better)
Translates to: LPEAVVTSMTSALVLKSNGLTTG*LLNIIL
Trigger: CAGAATGATATTTAACAACAAACCCGTGGTCAAACC...GTTAGACTTCAAGACCAGGGCAGAGGTCATTGAGGTCACTACCGCTTCTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ATGACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTACCCACTATTTTGGTTaGACCACGGGTTTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: MTSALVLKSNTSSCHSTATHYFG*TTGLLL
Trigger: TAACAACAAACCCGTGGTCAAACCAAAATAGTGGGT...AGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTGAGAACAGTCACTCCTaGTTCCTTCCACAACATGCT +
Preference number: 5 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETENSHS*FLPQHA
Trigger: AGCATGTTGTGGAAGGAACAAGGAGTGACTGTTCTC...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATACTTGAGGAACCGCTTTaGGACTTTGACATAAAGGGC +
Preference number: 5 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNILEEPL*DFDIKG
Trigger: GCCCTTTATGTCAAAGTCCAAAAGCGGTTCCTCAAG...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGCACAGTTTGCGGAGATaGGACTGTGTGATGACATCG +
Preference number: 5 (lower is better)
Translates to: CFKCSGLQSMGNNDILQEHSLRR*DCVMTS
Trigger: CGATGTCATCACACAGTCCAATCTCCGCAAACTGTG...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ATTATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCTATAGGCCCGGCTTTCCCCTTTTaGGTGTTAACAGCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: IIKHVSHVAAVVQSISIGPAFPF*VLTAVP
Trigger: AGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGG...GCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR CAA 90 bp TGTTTGCCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAAGCATGTGCAGGTATaGGGCAGGGTTCAAAACATT +
Preference number: 5 (lower is better)
Translates to: CLPCLNGHSDFLSQCLRNKHVQV*GRVQNI
Trigger: AATGTTTTGAACCCTGCCCAATACCTGCACATGCTT...GTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGGCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CAA 90 bp CGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCCTGAATTCACCAAGGAGGATCTaGGAGAAGCTTGTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: RVYHSLVTLNPNCLPCLNSPRRI*EKLVKR
Trigger: TCTCTTCACAAGCTTCTCCAAGATCCTCCTTGGTGA...ATTCAGGCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CAA 90 bp GGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCGAGAACAGTCACTCCTaGTTCCTTCCACAACATGCT +
Preference number: 5 (lower is better)
Translates to: GSVLSALVYSLWVTMTSSENSHS*FLPQHA
Trigger: AGCATGTTGTGGAAGGAACAAGGAGTGACTGTTCTC...GGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000549919.1
CDS-3UTR CAA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGCAGTCACAAACTGTTTaGAGCAGAGGCACAGCATCC +
Preference number: 5 (lower is better)
Translates to: EDLETCRLMLHSIAASNKQSQTV*SRGTAS
Trigger: GGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACTG...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTGTTACAGTTTTCCCATaGCATTCTCTGTCTACGCTC +
Preference number: 5 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETVTVFP*HSLSTL
Trigger: GAGCGTAGACAGAGAATGCAATGGGAAAACTGTAAC...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp GGACTCACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGGGCAGCTATGTCCATTaGCATTCTGCTTGCCATTTG +
Preference number: 5 (lower is better)
Translates to: GLTLRVYHSLVTLNPNCLGSYVH*HSACHL
Trigger: CAAATGGCAAGCAGAATGCAAATGGACATAGCTGCC...CAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGTGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCGGCAGCTATGTCCATTaGCATTCTGCTTGCCATTTG +
Preference number: 5 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCGSYVH*HSACHL
Trigger: CAAATGGCAAGCAGAATGCAAATGGACATAGCTGCC...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ACAATGACATCCTCCAGGAGGTTTCCGGCTTTCCCCTTTTTGGTGTTAACAGCTATGCCATTTTCTACTTaGGATGCAAAGCTGGACTTA +
Preference number: 5 (lower is better)
Translates to: TMTSSRRFPAFPFLVLTAMPFST*DAKLDL
Trigger: TAAGTCCAGCTTTGCATCCAAAGTAGAAAATGGCAT...AGCTGTTAACACCAAAAAGGGGAAAGCCGGAAACCTCCTGGAGGATGTCATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGCTTGAGGAACCGCTTTaGGACTTTGACATAAAGGGC +
Preference number: 5 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLLEEPL*DFDIKG
Trigger: GCCCTTTATGTCAAAGTCCAAAAGCGGTTCCTCAAG...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCATACAGCTTTCCTAGGTaGTACAAACAACTGGTAACA +
Preference number: 5 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSYSFPR*YKQLVT
Trigger: TGTTACCAGTTGTTTGTACAACCTAGGAAAGCTGTA...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCGTGGGGCAAACTGCCTaGGCATTTTCTGAATTGCTT +
Preference number: 5 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCVGQTA*AFSELL
Trigger: AAGCAATTCAGAAAATGCCAAGGCAGTTTGCCCCAC...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ACACTACGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCGGGATGTGGTCAGTCTaGGATCTCAGTGATTCCATA +
Preference number: 5 (lower is better)
Translates to: TLRVYHSLVTLNPNCLPCGMWSV*DLSDSI
Trigger: TATGGAATCACTGAGATCCAAGACTGACCACATCCC...GCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TTATTAACGCTACTTGGGAACTGGTGTCACAAGAAGTGCCTCAACTGTGCATTCAGCATGTGGGCAGCATaGAAGACAACATCAAACTCT +
Preference number: 5 (lower is better)
Translates to: LLTLLGNWCHKKCLNCAFSMWAA*KTTSNS
Trigger: AGAGTTTGATGTTGTCTTCAATGCTGCCCACATGCT...GAATGCACAGTTGAGGCACTTCTTGTGACACCAGTTCCCAAGTAGCGTTAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CAA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAATTCTCAGCTGCTTCATaGAGGCTAGCCTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: IQLECEVWLALLSISFSEFSAAS*RLACLS
Trigger: GCTCAGACAGGCTAGCCTCAATGAAGCAGCTGAGAA...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATTTCTGGAGTCTGCCATaGAGGTGCAGAATGGCTCCC +
Preference number: 5 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNFWSLP*RCRMAP
Trigger: GGGAGCCATTCTGCACCTCAATGGCAGACTCCAGAA...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp AAGTGTTCTAAGCTTCAGAAATTGATAAGCAGGCTGTCCCAAACAGGGAAGACAATGATGTTCCACAGTTaGCGGAGATTGGACTGTGTG +
Preference number: 5 (lower is better)
Translates to: KCSKLQKLISRLSQTGKTMMFHS*RRLDCV
Trigger: CACACAGTCCAATCTCCGCAAACTGTGGAACATCAT...TGTCTTCCCTGTTTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGAACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAACCGGCTTTCCCCTTTTaGGTGTTAACAGCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: QLLFNGEADHIYMECEREPAFPF*VLTAVP
Trigger: AGGCACAGCTGTTAACACCAAAAAGGGGAAAGCCGG...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ATGACCTCTGCCCTGGTCTTGAAGTCTAACACCAGCTCTTGTCATAGCACTGCTACAGGTAATTTTCAGTaGCAAAGAACTGGCTTAATG +
Preference number: 5 (lower is better)
Translates to: MTSALVLKSNTSSCHSTATGNFQ*QRTGLM
Trigger: CATTAAGCCAGTTCTTTGCAACTGAAAATTACCTGT...AGCAGTGCTATGACAAGAGCTGGTGTTAGACTTCAAGACCAGGGCAGAGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAACAGTCACAAACTGTTTaGAGCAGAGGCACAGCATCC +
Preference number: 5 (lower is better)
Translates to: IQLECEVWLALLSISFSEQSQTV*SRGTAS
Trigger: GGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACTG...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TCTAATAACCTGTTGGTTAGTTATTGGAACTGCAAGGCTTACAAACTCCTCCCCGTTACAGTTTTCCCATaGCATTCTCTGTCTACGCTC +
Preference number: 5 (lower is better)
Translates to: SNNLLVSYWNCKAYKLLPVTVFP*HSLSTL
Trigger: GAGCGTAGACAGAGAATGCAATGGGAAAACTGTAAC...GGGGAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAGGTTATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTCATTCTGCTTGCCATTaGTTACAGTTTTCCCATTGC +
Preference number: 5 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETHSACH*LQFSHC
Trigger: GCAATGGGAAAACTGTAACAAATGGCAAGCAGAATG...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp AGAAGCACAAAACACCTTCCCTTTTGTCTAATAACCTGTTGGTTAGTTATTGGAGCTTCACCCATCATGTaGTACAAGCTCTGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: RSTKHLPFCLITCWLVIGASPIM*YKLCGA
Trigger: TGCCCCACAGAGCTTGTACAACATGATGGGTGAAGC...TCCAATAACTAACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTTGTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGGGGATGTGGTCAGTCTaGGATCTCAGTGATTCCATA +
Preference number: 5 (lower is better)
Translates to: EDLETCRLMLHSIAASNKGMWSV*DLSDSI
Trigger: TATGGAATCACTGAGATCCAAGACTGACCACATCCC...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAGGAGAGCATGTGGGCAGCATaGAAGACAACATCAAACTCT +
Preference number: 5 (lower is better)
Translates to: CFKCSGLQSMGNNDILQESMWAA*KTTSNS
Trigger: AGAGTTTGATGTTGTCTTCAATGCTGCCCACATGCT...CTCCTGGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TCTAATAACCTGTTGGTTAGTTATTGGAACTGCAAGGCTTACAAACTCCTCCCCCTTAACCCTAATTGTTaGCCATGCCTGAATGGACAC +
Preference number: 5 (lower is better)
Translates to: SNNLLVSYWNCKAYKLLPLNPNC*PCLNGH
Trigger: GTGTCCATTCAGGCATGGCAAACAATTAGGGTTAAG...GGGGAGGAGTTTGTAAGCCTTGCAGTTCCAATAACTAACCAACAGGTTATTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTAGTGACCTCAACAGGTAATTTTCAGTaGCAAAGAACTGGCTTAATG +
Preference number: 5 (lower is better)
Translates to: LTAVPTAKWILPEAVVTSTGNFQ*QRTGLM
Trigger: CATTAAGCCAGTTCTTTGCAACTGAAAATTACCTGT...TGAGGTCACTACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAAAAGGACAGAGAGGCATaGGCCAGACCTCATAGTGTC +
Preference number: 5 (lower is better)
Translates to: IHISCSKDIGSKEAVGYKKDREA*ARPHSV
Trigger: GACACTATGAGGTCTGGCCAATGCCTCTCTGTCCTT...TTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp ATATTTTTAGCACTGTCTGCAATAATCCACCATAAATCCCTGAGCGGAGACATTTCACCAAGGAGGATCTaGGAGAAGCTTGTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: IFLALSAIIHHKSLSGDISPRRI*EKLVKR
Trigger: TCTCTTCACAAGCTTCTCCAAGATCCTCCTTGGTGA...AATGTCTCCGCTCAGGGATTTATGGTGGATTATTGCAGACAGTGCTAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321196.8
CDS-3UTR CAA 90 bp ATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACAGTCACAAACTGTTTaGAGCAGAGGCACAGCATCC +
Preference number: 5 (lower is better)
Translates to: IHISCSKDIGSKEAVGYKQSQTV*SRGTAS
Trigger: GGATGCTGTGCCTCTGCTCAAAACAGTTTGTGACTG...TTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGGTTACAGTTTTCCCATaGCATTCTCTGTCTACGCTC +
Preference number: 5 (lower is better)
Translates to: EDLETCRLMLHSIAASNKVTVFP*HSLSTL
Trigger: GAGCGTAGACAGAGAATGCAATGGGAAAACTGTAAC...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATCATTCTGCTTGCCATTaGTTACAGTTTTCCCATTGC +
Preference number: 5 (lower is better)
Translates to: AEDLETCRLMLHSIAASNHSACH*LQFSHC
Trigger: GCAATGGGAAAACTGTAACAAATGGCAAGCAGAATG...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TGTATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACGGCAGCTATGTCCATTaGCATTCTGCTTGCCATTTG +
Preference number: 5 (lower is better)
Translates to: CIHISCSKDIGSKEAVGYGSYVH*HSACHL
Trigger: CAAATGGCAAGCAGAATGCAAATGGACATAGCTGCC...GTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp GGCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAAATGCCATTTTCTACTTaGGATGCAAAGCTGGACTTA +
Preference number: 5 (lower is better)
Translates to: GRRPRNMQANATLYCSFKMPFST*DAKLDL
Trigger: TAAGTCCAGCTTTGCATCCAAAGTAGAAAATGGCAT...TTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATAATGCCATTTTCTACTTaGGATGCAAAGCTGGACTTA +
Preference number: 5 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNIMPFST*DAKLDL
Trigger: TAAGTCCAGCTTTGCATCCAAAGTAGAAAATGGCAT...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ATATTTTTAGCACTGTCTGCAATAATCCACCATAAATCCCTGAGCGGAGACATTCTTGAGGAACCGCTTTaGGACTTTGACATAAAGGGC +
Preference number: 5 (lower is better)
Translates to: IFLALSAIIHHKSLSGDILEEPL*DFDIKG
Trigger: GCCCTTTATGTCAAAGTCCAAAAGCGGTTCCTCAAG...AATGTCTCCGCTCAGGGATTTATGGTGGATTATTGCAGACAGTGCTAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CAA 90 bp TTTTTGGTGTTAACAGCTGTGCCTACAGCAAAGTGGATTCTTCCAGAAGCGGTATACAGCTTTCCTAGGTaGTACAAACAACTGGTAACA +
Preference number: 5 (lower is better)
Translates to: FLVLTAVPTAKWILPEAVYSFPR*YKQLVT
Trigger: TGTTACCAGTTGTTTGTACAACCTAGGAAAGCTGTA...TACCGCTTCTGGAAGAATCCACTTTGCTGTAGGCACAGCTGTTAACACCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGAGACTTACAGCTTTCCTAGGTaGTACAAACAACTGGTAACA +
Preference number: 5 (lower is better)
Translates to: LFKGHRLKGGCRLQTTETYSFPR*YKQLVT
Trigger: TGTTACCAGTTGTTTGTACAACCTAGGAAAGCTGTA...AGTCTCAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTCTGCTTCGGGGAGTTaGCTTAAACGCATATATGCT +
Preference number: 5 (lower is better)
Translates to: EDLETCRLMLHSIAASNKSASGS*LKRIYA
Trigger: AGCATATATGCGTTTAAGCAAACTCCCCGAAGCAGA...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAAGGGATGTGGTCAGTCTaGGATCTCAGTGATTCCATA +
Preference number: 5 (lower is better)
Translates to: IQLECEVWLALLSISFSEGMWSV*DLSDSI
Trigger: TATGGAATCACTGAGATCCAAGACTGACCACATCCC...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS TCA 90 bp CTGTTTTATTTTCAGCCTGTGAAAGACAAAGACATCATAAACTGCTaGAACTGCGAGAACAGTCACTCCTTGTTCCTTCCACAACATGCT +
Preference number: 5 (lower is better)
Translates to: LFYFQPVKDKDIINC*NCENSHSLFLPQHA
Trigger: AGCATGTTGTGGAAGGAACAAGGAGTGACTGTTCTCGCAGTTTCAGCAGTTTATGATGTCTTTGTCTTTCACAGGCTGAAAATAAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000549919.1
ENST00000551915.5
CDS TCA 90 bp ACAGGAAATAATCCAGCAGCACCACCCATTCATCAGTTAACAATTTaGGATACACGGTACTTCTGTAAAAATCAGGCTATCGAGGTAACC +
Preference number: 5 (lower is better)
Translates to: TGNNPAAPPIHQLTI*DTRYFCKNQAIEVT
Trigger: GGTTACCTCGATAGCCTGATTTTTACAGAAGTACCGTGTATCTCAAATTGTTAACTGATGAATGGGTGGTGCTGCTGGATTATTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CAA 90 bp ATACATATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAATCACCAAGGAGGATCTaGGAGAAGCTTGTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: IHISCSKDIGSKEAVGYKSPRRI*EKLVKR
Trigger: TCTCTTCACAAGCTTCTCCAAGATCCTCCTTGGTGA...TTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAATATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp ATTAGTTGTTCAAAGGACATAGGCTCAAAGGAGGCTGTAGGTTACAAACCACTGATGCCATTTTCTACTTaGGATGCAAAGCTGGACTTA +
Preference number: 5 (lower is better)
Translates to: ISCSKDIGSKEAVGYKPLMPFST*DAKLDL
Trigger: TAAGTCCAGCTTTGCATCCAAAGTAGAAAATGGCAT...CAGTGGTTTGTAACCTACAGCCTCCTTTGAGCCTATGTCCTTTGAACAACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548305.5
CDS-3UTR CAA 90 bp GCCCTAAATTATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCTACAGCTTTCCTAGGTaGTACAAACAACTGGTAACA +
Preference number: 5 (lower is better)
Translates to: ALNYKACQPCCCGSTKHFYSFPR*YKQLVT
Trigger: TGTTACCAGTTGTTTGTACAACCTAGGAAAGCTGTA...GAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTATAATTTAGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR CAA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGTGGGGCAAACTGCCTaGGCATTTTCTGAATTGCTT +
Preference number: 5 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNVGQTA*AFSELL
Trigger: AAGCAATTCAGAAAATGCCAAGGCAGTTTGCCCCAC...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp CAGCCCTGTAGTGAAAAGTGTCAGGGACATTTAGTTATTAATGATCCGTGCATTTCTAAGCTTCAGAAATaGATAAGCAGGCTGTCCCAA +
Preference number: 5 (lower is better)
Translates to: QPCSEKCQGHLVINDPCISKLQK*ISRLSQ
Trigger: TTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGA...AATGCACGGATCATTAATAACTAAATGTCCCTGACACTTTTCACTACAGGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CAA 90 bp GACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGTTGTCTAAGCTTCAGAAATaGATAAGCAGGCTGTCCCAA +
Preference number: 5 (lower is better)
Translates to: DLETCRLMLHSIAASNKLSKLQK*ISRLSQ
Trigger: TTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGA...CAACTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATATTGTCTAATAACCTGTaGGTTAGTTATTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNILSNNL*VSYWNC
Trigger: GCAGTTCCAATAACTAACCAACAGGTTATTAGACAA...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATAAAAACACCTTCCCTTTaGTCTAATAACCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNIKTPSL*SNNLLV
Trigger: AACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTT...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp ATAAAGCATGTCAGCCATGTTGCTGCGGTAGTACAAAGCATTTCTATAGGCGCTGAACATTTATCAGCATaGCTGTTTAGGTACCCATTA +
Preference number: 5 (lower is better)
Translates to: IKHVSHVAAVVQSISIGAEHLSA*LFRYPL
Trigger: TAATGGGTACCTAAACAGCAATGCTGATAAATGTTC...AGCGCCTATAGAAATGCTTTGTACTACCGCAGCAACATGGCTGACATGCTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS-3UTR CAA 90 bp CAGCTTCTTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAATACAGACACCAGTTCTaGACACTCAATCCGGTATGT +
Preference number: 5 (lower is better)
Translates to: QLLFNGEADHIYMECEREYRHQF*TLNPVC
Trigger: ACATACCGGATTGAGTGTCAAGAACTGGTGTCTGTA...TTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAAGAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CAA 90 bp CCATGCCTGAATGGACACTCTGACTTCCTCTCACAGTGTTTAAGGAACAACATAATTAAACCATCCAAGTaGCCACTCGATAGATCTTTA +
Preference number: 5 (lower is better)
Translates to: PCLNGHSDFLSQCLRNNIIKPSK*PLDRSL
Trigger: TAAAGATCTATCGAGTGGCAACTTGGATGGTTTAAT...TATGTTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGTGTCCATTCAGGCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CAA 90 bp ATATTTTTAGCACTGTCTGCAATAATCCACCATAAATCCCTGAGCGGAGACATTCATTCTGCTTGCCATTaGTTACAGTTTTCCCATTGC +
Preference number: 5 (lower is better)
Translates to: IFLALSAIIHHKSLSGDIHSACH*LQFSHC
Trigger: GCAATGGGAAAACTGTAACAAATGGCAAGCAGAATG...AATGTCTCCGCTCAGGGATTTATGGTGGATTATTGCAGACAGTGCTAAAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CAA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAATCTAAGCTTCAGAAATaGATAAGCAGGCTGTCCCAA +
Preference number: 5 (lower is better)
Translates to: IQLECEVWLALLSISFSESKLQK*ISRLSQ
Trigger: TTGGGACAGCCTGCTTATCAATTTCTGAAGCTTAGA...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp GCAGAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATTTGTCTAATAACCTGTaGGTTAGTTATTGGAACTGC +
Preference number: 5 (lower is better)
Translates to: AEDLETCRLMLHSIAASNLSNNL*VSYWNC
Trigger: GCAGTTCCAATAACTAACCAACAGGTTATTAGACAA...ATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp GGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGACATCCTCCAAAACACCTTCCCTTTaGTCTAATAACCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: GSVLSALVYSLWVTMTSSKTPSL*SNNLLV
Trigger: AACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTT...GGAGGATGTCATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp CGTGTTTATCACTCCCTCGTAACACTTAACCCTAATTGTTTGCCATGCCTGAATACAGGTAATTTTCAGTaGCAAAGAACTGGCTTAATG +
Preference number: 5 (lower is better)
Translates to: RVYHSLVTLNPNCLPCLNTGNFQ*QRTGLM
Trigger: CATTAAGCCAGTTCTTTGCAACTGAAAATTACCTGT...ATTCAGGCATGGCAAACAATTAGGGTTAAGTGTTACGAGGGAGTGATAAACACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp GAAGACCTAGAAACATGCAGGCTAATGCTACACTCTATTGCAGCTTCAAATAAGGGTTTGACCACGGGTTaGTTGTTAAATATCATTCTG +
Preference number: 5 (lower is better)
Translates to: EDLETCRLMLHSIAASNKGLTTG*LLNIIL
Trigger: CAGAATGATATTTAACAACAAACCCGTGGTCAAACC...CTTATTTGAAGCTGCAATAGAGTGTAGCATTAGCCTGCATGTTTCTAGGTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp TTTTTAATGGAGAGGCTGATCATATATACATGGAGTGTGAAAGGGAAGGAGAAACATTCTGCTTGCCATTaGTTACAGTTTTCCCATTGC +
Preference number: 5 (lower is better)
Translates to: FLMERLIIYTWSVKGKEKHSACH*LQFSHC
Trigger: GCAATGGGAAAACTGTAACAAATGGCAAGCAGAATG...TTTCTCCTTCCCTTTCACACTCCATGTATATATGATCAGCCTCTCCATTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp AGTAAACTTGTCTTGTGCTCTATATTTTTAGCACTGTCTGCAATAATCCACCATACCCACTATTTTGGTTaGACCACGGGTTTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: SKLVLCSIFLALSAIIHHTHYFG*TTGLLL
Trigger: TAACAACAAACCCGTGGTCAAACCAAAATAGTGGGT...ATGGTGGATTATTGCAGACAGTGCTAAAAATATAGAGCACAAGACAAGTTTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS-3UTR CAA 90 bp ATACAACTCGAGTGTGAAGTATGGTTAGCTCTACTCTCCATATCCTTTTCAGAATCATCAGTTAACAATTaGAGATACACGGTACTTCTG +
Preference number: 5 (lower is better)
Translates to: IQLECEVWLALLSISFSESSVNN*RYTVLL
Trigger: CAGAAGTACCGTGTATCTCAAATTGTTAACTGATGA...TTCTGAAAAGGATATGGAGAGTAGAGCTAACCATACTTCACACTCGAGTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS-3UTR CAA 90 bp AATGCCAAAAGGTTCTGTTTTAAGTGCTCTGGTTTACAGTCTATGGGTAACAATGAACATTTATCAGCATaGCTGTTTAGGTACCCATTA +
Preference number: 5 (lower is better)
Translates to: NAKRFCFKCSGLQSMGNNEHLSA*LFRYPL
Trigger: TAATGGGTACCTAAACAGCAATGCTGATAAATGTTC...ATTGTTACCCATAGACTGTAAACCAGAGCACTTAAAACAGAACCTTTTGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000549919.1
CDS-3UTR CAA 90 bp AGTAAACTTGTCTTGTGCTCTATATTTTTAGCACTGTCTGCAATAATCCACCATAAAACACCTTCCCTTTaGTCTAATAACCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SKLVLCSIFLALSAIIHHKTPSL*SNNLLV
Trigger: AACCAACAGGTTATTAGACAAAAGGGAAGGTGTTTT...ATGGTGGATTATTGCAGACAGTGCTAAAAATATAGAGCACAAGACAAGTTTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321196.8
ENST00000546590.2
CDS CCA 72 bp CCCCATGCCCGGCGCCCGCAAGCGGTGAGCGGCGTTTaGGCTCCGCGTCCCCCGGCGGAAGCGCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PHARRPQAVSGV*APRPPAEAQGW
Trigger: CCAGCCCTGCGCTTCCGCCGGGGGACGCGGAGCCCAAACGCCGCTCACCGCTTGCGGGCGCCGGGCATGGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000551915.5
CDS CAA 72 bp TCCCCATGCCCGGCGCCCGCAAGCGGTGAGCGGCGTTaGGGCTCCGCGTCCCCCGGCGGAAGCGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: SPCPAPASGERR*GSASPGGSAGL
Trigger: CAGCCCTGCGCTTCCGCCGGGGGACGCGGAGCCCAAACGCCGCTCACCGCTTGCGGGCGCCGGGCATGGGGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000551915.5
CDS TCA 72 bp CACACCACACTCCCCATGCCCGGCGCCCGCAAGCGGTaGGCGGCGTTTGGGCTCCGCGTCCCCCGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: HTTLPMPGARKR*AAFGLRVPRRK
Trigger: CTTCCGCCGGGGGACGCGGAGCCCAAACGCCGCTCACCGCTTGCGGGCGCCGGGCATGGGGAGTGTGGTGTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000551915.5
CDS CAA 90 bp ACACCACACTCCCCATGCCCGGCGCCCGCAAGCGGTGAGCGGCGTTaGGGCTCCGCGTCCCCCGGCGGAAGCGCAGGGCTGGTCTTTCGC +
Preference number: 6 (lower is better)
Translates to: TPHSPCPAPASGERR*GSASPGGSAGLVFR
Trigger: GCGAAAGACCAGCCCTGCGCTTCCGCCGGGGGACGCGGAGCCCAAACGCCGCTCACCGCTTGCGGGCGCCGGGCATGGGGAGTGTGGTGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000551915.5
CDS CCA 72 bp GTTTGGGCTCCGCGTCCCCCGGCGGAAGCGCAGGGCTaGTCTTTCGCGCGGGTCGCGATCCCCACCCTAACC +
Preference number: 6 (lower is better)
Translates to: VWAPRPPAEAQG*SFARVAIPTLT
Trigger: GGTTAGGGTGGGGATCGCGACCCGCGCGAAAGACCAGCCCTGCGCTTCCGCCGGGGGACGCGGAGCCCAAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000551915.5
CDS GCA 72 bp ATACAAGGCGAGCCCCAGAGCGCTGCTCACCAACTCTaGAATCATCTCTCCACCGCCTTCCCTCCGGCTCGG +
Preference number: 6 (lower is better)
Translates to: IQGEPQSAAHQL*NHLSTAFPPAR
Trigger: CCGAGCCGGAGGGAAGGCGGTGGAGAGATGATTGCAGAGTTGGTGAGCAGCGCTCTGGGGCTCGCCTTGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000546590.2
ENST00000548305.5
ENST00000551915.5
CDS CCA 72 bp CCAGCTCCCTTCTCCAGTGAAGTGAGAAGCGGTGGCTaGAGACTCCAGAAGCTCCCGCGTGGGGTTCTCGAC +
Preference number: 6 (lower is better)
Translates to: PAPFSSEVRSGG*RLQKLPRGVLD
Trigger: GTCGAGAACCCCACGCGGGAGCTTCTGGAGTCTCCAGCCACCGCTTCTCACTTCACTGGAGAAGGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551915.5
CDS GCA 72 bp GAGACTGGCCCCGACATCGGCTCGTCCCACGATTCCTaGCACTGCCTCCGTGTGAATGGGGTGAGAAGCAAA +
Preference number: 6 (lower is better)
Translates to: ETGPDIGSSHDS*HCLRVNGVRSK
Trigger: TTTGCTTCTCACCCCATTCACACGGAGGCAGTGGCAGGAATCGTGGGACGAGCCGATGTCGGGGCCAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000549919.1
ENST00000551915.5
CDS GCA 72 bp GGCCCCGACATCGGCTCGTCCCACGATTCCTGCCACTaGCTCCGTGTGAATGGGGTGAGAAGCAAACATCAA +
Preference number: 6 (lower is better)
Translates to: GPDIGSSHDSCH*LRVNGVRSKHQ
Trigger: TTGATGTTTGCTTCTCACCCCATTCACACGGAGGCAGTGGCAGGAATCGTGGGACGAGCCGATGTCGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000549919.1
ENST00000551915.5
CDS TCA 72 bp GGCTGTCATCATAGCAGAAATCCGCACTCAGGGTGTTaGGATACAAGGCGAGCCCCAGAGCGCTGCTCACCA +
Preference number: 6 (lower is better)
Translates to: GCHHSRNPHSGC*DTRRAPERCSP
Trigger: TGGTGAGCAGCGCTCTGGGGCTCGCCTTGTATCTCAACACCCTGAGTGCGGATTTCTGCTATGATGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000551915.5
CDS TCA 72 bp CTCTGTCATCATAGCAGAAATCCGCACTCAGGGTGTTaGGATACAAGGCGAGCCCCAGAGCGCTGCTCACCA +
Preference number: 6 (lower is better)
Translates to: LCHHSRNPHSGC*DTRRAPERCSP
Trigger: TGGTGAGCAGCGCTCTGGGGCTCGCCTTGTATCTCAACACCCTGAGTGCGGATTTCTGCTATGATGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546590.2
CDS CAA 90 bp ATCAAGCCAGCCATGAATGTCCAGTATCCATCACCAAGGAGGATCTaGGAGAAGCTTGTGAAGAGACCAGTGACTGCTGCATGCAACAGG +
Preference number: 6 (lower is better)
Translates to: IKPAMNVQYPSPRRI*EKLVKRPVTAACNR
Trigger: CCTGTTGCATGCAGCAGTCACTGGTCTCTTCACAAGCTTCTCCAAGATCCTCCTTGGTGATGGATACTGGACATTCATGGCTGGCTTGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000549919.1
ENST00000551915.5
CDS CCA 72 bp AAAATCATTGTAGAAAATGTGCGTCCATGGAGTTTCTaGGAGAAGGTCCTGATTAGTCTTGATAGCACGGCT +
Preference number: 6 (lower is better)
Translates to: KIIVENVRPWSF*EKVLISLDSTA
Trigger: AGCCGTGCTATCAAGACTAATCAGGACCTTCTCCCAGAAACTCCATGGACGCACATTTTCTACAATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321196.8
ENST00000548305.5
ENST00000551915.5
CDS CCA 72 bp AAAATCATTGTAGAAAATGTGCGTCCATGGAGTTTCTaGGAGAAGGTCCTGATTAGTCTTGATAGCACGGCA +
Preference number: 6 (lower is better)
Translates to: KIIVENVRPWSF*EKVLISLDSTA
Trigger: TGCCGTGCTATCAAGACTAATCAGGACCTTCTCCCAGAAACTCCATGGACGCACATTTTCTACAATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS TCA 72 bp AATCCAGCAGCACCACCCATTCATCAGTTAACAATTTaGGATACACGGTACTTCTGTAAAAATCAGGCTATC +
Preference number: 6 (lower is better)
Translates to: NPAAPPIHQLTI*DTRYFCKNQAI
Trigger: GATAGCCTGATTTTTACAGAAGTACCGTGTATCTCAAATTGTTAACTGATGAATGGGTGGTGCTGCTGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549919.1
CDS TCA 72 bp ATAGGTGCATATATTTATGGGATACAGGAGATGTTTTaGTACAGGGATGATACGGACATCTCACATCTTATC +
Preference number: 6 (lower is better)
Translates to: IGAYIYGIQEMF*YRDDTDISHLI
Trigger: GATAAGATGTGAGATGTCCGTATCATCCCTGTATCAAAACATCTCCTGTATCCCATAAATATATGCACCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551915.5