Pregenerated sensors for TMSB15B (Homo sapiens)
Ensembl gene IDs: ENSG00000158427, ENSG00000269226Ensembl transcript IDs: ENST00000455723.1, ENST00000563257.5, ENST00000598087.3, ENST00000620307.4
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGACTCAGTTGAGCTCTGGTTGGTCAATACAGCTGAGCCCTTATTaGCAGCGACAGGTGAGCTCTGGTTGGTTGCTTCAGGTGAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LTQLSSGWSIQLSPY*QRQVSSGWLLQVSS Trigger: AGAGCTCACCTGAAGCAACCAACCAGAGCTCACCTGTCGCTGCCAATAAGGGCTCAGCTGTATTGACCAACCAGAGCTCAACTGAGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR GCA 90 bp | GGAGGAAAGAGGCTATTCCTGTGTACAGTTTGCAAACCAGGGAGGTaGAGACTTCAGTGTAAAACAAAAGTGCAGTTCCAGAGAACAAAG | + |
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Preference number: 1 (lower is better) Translates to: GGKRLFLCTVCKPGR*RLQCKTKVQFQRTK Trigger: CTTTGTTCTCTGGAACTGCACTTTTGTTTTACACTGAAGTCTGCACCTCCCTGGTTTGCAAACTGTACACAGGAATAGCCTCTTTCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR GCA 90 bp | TTTGTAAAGGAATTTGGAGGAAAGAGGCTATTCCTGTGTACAGTTTaGAAACCAGGGAGGTGCAGACTTCAGTGTAAAACAAAAGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: FVKEFGGKRLFLCTV*KPGRCRLQCKTKVQ Trigger: CTGCACTTTTGTTTTACACTGAAGTCTGCACCTCCCTGGTTTGCAAACTGTACACAGGAATAGCCTCTTTCCTCCAAATTCCTTTACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR CCA 90 bp | GTACAGTCAATTTATGCAAATAAACAATTCAAACTTAGTTCTGATTaGTTGACTCAGTTGAGCTCTGGTTGGTCAATACAGCTGAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: VQSIYANKQFKLSSD*LTQLSSGWSIQLSP Trigger: AGGGCTCAGCTGTATTGACCAACCAGAGCTCAACTGAGTCAACCAATCAGAACTAAGTTTGAATTGTTTATTTGCATAAATTGACTGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR CAA 90 bp | GTTGACTCAGTTGAGCTCTGGTTGGTCAATACAGCTGAGCCCTTATaGGCAGCGACAGGTGAGCTCTGGTTGGTTGCTTCAGGTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VDSVELWLVNTAEPL*AATGELWLVASGEL Trigger: GAGCTCACCTGAAGCAACCAACCAGAGCTCACCTGTCGCTGCCAATAAGGGCTCAGCTGTATTGACCAACCAGAGCTCAACTGAGTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR-3UTR CCA 90 bp | AAGGAATTTGGAGGAAAGAGGCTATTCCTGTGTACAGTTTGCAAACCAGGGAGGAGATCGAGACCATCCTaGCCAACATGGCGAAACCCC | + |
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Preference number: 2 (lower is better) Translates to: KEFGGKRLFLCTVCKPGRRSRPS*PTWRNP Trigger: GGGGTTTCGCCATGTTGGCCAGGATGGTCTCGATCT...CCTCCCTGGTTTGCAAACTGTACACAGGAATAGCCTCTTTCCTCCAAATTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGAACAAAGAGAGGATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCGTTGGTTGCTTCAGGTaGGCTCTGAAAGTTCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: REQREDMAFIEKVPIEVPVGCFR*ALKVPK Trigger: CTTTGGAACTTTCAGAGCTCACCTGAAGCAACCAAC...GGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATCCTCTCTTTGTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR-3UTR CCA 90 bp | AAGGAATTTGGAGGAAAGAGGCTATTCCTGTGTACAGTTTGCAAACCAGGGAGGAAACTTAGTTCTGATTaGTTGACTCAGTTGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: KEFGGKRLFLCTVCKPGRKLSSD*LTQLSS Trigger: AGAGCTCAACTGAGTCAACCAATCAGAACTAAGTTT...CCTCCCTGGTTTGCAAACTGTACACAGGAATAGCCTCTTTCCTCCAAATTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR CAA 90 bp | TATGCAAATAAACAATTCAAACTTAGTTCTGATTGGTTGACTCAGTaGAGCTCTGGTTGGTCAATACAGCTGAGCCCTTATTGGCAGCGA | + |
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Preference number: 2 (lower is better) Translates to: YANKQFKLSSDWLTQ*SSGWSIQLSPYWQR Trigger: TCGCTGCCAATAAGGGCTCAGCTGTATTGACCAACCAGAGCTCAACTGAGTCAACCAATCAGAACTAAGTTTGAATTGTTTATTTGCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAGGATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCAGTACAGTCAACACGTGGCAGCTTaGCTCTATTTTAAATTTAAG | + |
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Preference number: 2 (lower is better) Translates to: KRGYGFYRESSYRGSQYSQHVAA*LYFKFK Trigger: CTTAAATTTAAAATAGAGCCAAGCTGCCACGTGTTG...ACTGTACTGGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATCCTCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR CAA 90 bp | CAGTCAATTTATGCAAATAAACAATTCAAACTTAGTTCTGATTGGTaGACTCAGTTGAGCTCTGGTTGGTCAATACAGCTGAGCCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: QSIYANKQFKLSSDW*TQLSSGWSIQLSPY Trigger: ATAAGGGCTCAGCTGTATTGACCAACCAGAGCTCAACTGAGTCAACCAATCAGAACTAAGTTTGAATTGTTTATTTGCATAAATTGACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR GCA 72 bp | AGGCTATTCCTGTGTACAGTTTGCAAACCAGGGAGGTaGAGACTTCAGTGTAAAACAAAAGTGCAGTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: RLFLCTVCKPGR*RLQCKTKVQFQ Trigger: CTGGAACTGCACTTTTGTTTTACACTGAAGTCTGCACCTCCCTGGTTTGCAAACTGTACACAGGAATAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR GCA 72 bp | GAATTTGGAGGAAAGAGGCTATTCCTGTGTACAGTTTaGAAACCAGGGAGGTGCAGACTTCAGTGTAAAACA | + |
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Preference number: 3 (lower is better) Translates to: EFGGKRLFLCTV*KPGRCRLQCKT Trigger: TGTTTTACACTGAAGTCTGCACCTCCCTGGTTTGCAAACTGTACACAGGAATAGCCTCTTTCCTCCAAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR TCA 72 bp | GATTACTTCAGACCCTGTGTTTTCATTTCCTCATTCTaGGATAAGGAGGTTAGTCCACATGACCTTCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: DYFRPCVFISSF*DKEVSPHDLLS Trigger: GGAGAGAAGGTCATGTGGACTAACCTCCTTATCTCAGAATGAGGAAATGAAAACACAGGGTCTGAAGTAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598087.3 |
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| 3UTR-3UTR CAA 90 bp | GATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCAGTACAGTCAATTTAGATTGGTTGACTCAGTaGAGCTCTGGTTGGTCAATA | + |
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Preference number: 3 (lower is better) Translates to: DMAFIEKVPIEVPSTVNLDWLTQ*SSGWSI Trigger: TATTGACCAACCAGAGCTCAACTGAGTCAACCAATC...TAAATTGACTGTACTGGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| 3UTR CCA 72 bp | GAATTTGTAGTACACGTGTTAGCTCTAGTCAACACGTaGCAGCTTGGCTCTATTTTAAATTTAAGCTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: EFVVHVLALVNT*QLGSILNLSSV Trigger: AACTGAGCTTAAATTTAAAATAGAGCCAAGCTGCCACGTGTTGACTAGAGCTAACACGTGTACTACAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR GCA 90 bp | AAGGAATTTGGAGGAAAGAGGCTATTCCTGTGTACAGTTTGCAAACCAGGGAGGCCTGGCTTGGTGATGTaGCTGAGGTCCCAGCTACTC | + |
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Preference number: 4 (lower is better) Translates to: KEFGGKRLFLCTVCKPGRPGLVM*LRSQLL Trigger: GAGTAGCTGGGACCTCAGGCACATCACCAAGCCAGG...CCTCCCTGGTTTGCAAACTGTACACAGGAATAGCCTCTTTCCTCCAAATTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR GCA 90 bp | GATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCAGTACAGTCAATTTACTCAAGCGATCCTCCTaGCTCGGCCTCCCAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: DMAFIEKVPIEVPSTVNLLKRSS*LGLPRS Trigger: GCTCCTTGGGAGGCCGAGGCAGGAGGATCGCTTGAG...TAAATTGACTGTACTGGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR TCA 90 bp | AGAGAACAAAGAGAGGATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCCCTCCTGGGTTCAAGTaGTTTCCCTGCCTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: REQREDMAFIEKVPIEVPPPGFK*FPCLSF Trigger: GAAGCTGAGGCAGGGAAATCACTTGAACCCAGGAGG...GGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATCCTCTCTTTGTTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR CCA 90 bp | AAGAGAGGATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCAGTACAGTAGATCGAGACCATCCTaGCCAACATGGCGAAACCCC | + |
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Preference number: 4 (lower is better) Translates to: KRGYGFYRESSYRGSQYSRSRPS*PTWRNP Trigger: GGGGTTTCGCCATGTTGGCCAGGATGGTCTCGATCT...ACTGTACTGGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATCCTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR TCA 90 bp | AAGAGAGGATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCAGTACAGTGTTGGTTGCTTCAGGTaGGCTCTGAAAGTTCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: KRGYGFYRESSYRGSQYSVGCFR*ALKVPK Trigger: CTTTGGAACTTTCAGAGCTCACCTGAAGCAACCAAC...ACTGTACTGGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATCCTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR GCA 90 bp | AATAAACAATTCAAACTTAGTTCTGATTGGTTGACTCAGTTGAGCTCTGGTTGGCTGAGGCAGGAGAACTaGTTGAACTCGGGAAGCGAA | + |
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Preference number: 4 (lower is better) Translates to: NKQFKLSSDWLTQLSSGWLRQEN*LNSGSE Trigger: TTCGCTTCCCGAGTTCAAGCAGTTCTCCTGCCTCAG...CCAACCAGAGCTCAACTGAGTCAACCAATCAGAACTAAGTTTGAATTGTTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR GCA 90 bp | AATAAACAATTCAAACTTAGTTCTGATTGGTTGACTCAGTTGAGCTCTGGTTGGACAGGCATGAGCTACTaGGCCCAGCCGACAAAACTT | + |
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Preference number: 4 (lower is better) Translates to: NKQFKLSSDWLTQLSSGWTGMSY*AQPTKL Trigger: AAGTTTTGTCGGCTGGGCGCAGTAGCTCATGCCTGT...CCAACCAGAGCTCAACTGAGTCAACCAATCAGAACTAAGTTTGAATTGTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR GCA 90 bp | AAGAGAGGATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCAGTACAGTTGCAAACCAGGGAGGTaGAGACTTCAGTGTAAAACA | + |
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Preference number: 4 (lower is better) Translates to: KRGYGFYRESSYRGSQYSCKPGR*RLQCKT Trigger: TGTTTTACACTGAAGTCTGCACCTCCCTGGTTTGCA...ACTGTACTGGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATCCTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR CCA 90 bp | AAGAGAGGATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCAGTACAGTATACCAAATTTAGCCTaGCTTGGTGATGTGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KRGYGFYRESSYRGSQYSIPNLA*LGDVPE Trigger: CTCAGGCACATCACCAAGCCAGGCTAAATTTGGTAT...ACTGTACTGGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATCCTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR GCA 90 bp | AAGGAATTTGGAGGAAAGAGGCTATTCCTGTGTACAGTTTGCAAACCAGGGAGGAGTGTAAAACAAAAGTaGAGTTCCAGAGAACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: KEFGGKRLFLCTVCKPGRSVKQK*SSREQR Trigger: TCTTTGTTCTCTGGAACTGCACTTTTGTTTTACACT...CCTCCCTGGTTTGCAAACTGTACACAGGAATAGCCTCTTTCCTCCAAATTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR GCA 90 bp | AATAAACAATTCAAACTTAGTTCTGATTGGTTGACTCAGTTGAGCTCTGGTTGGTTCCTGTGTACAGTTTaGAAACCAGGGAGGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: NKQFKLSSDWLTQLSSGWFLCTV*KPGRCR Trigger: TCTGCACCTCCCTGGTTTGCAAACTGTACACAGGAA...CCAACCAGAGCTCAACTGAGTCAACCAATCAGAACTAAGTTTGAATTGTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR TCA 90 bp | CATATTAATCAGGAGGTCACAGGTGACAAAATTCAGACCATAACATTTATGCTCTCAGGAGGTCACAGGTaGCAAAATTCAGACCATAAC | + |
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Preference number: 4 (lower is better) Translates to: HINQEVTGDKIQTITFMLSGGHR*QNSDHN Trigger: GTTATGGTCTGAATTTTGTCACCTGTGACCTCCTGA...GAGCATAAATGTTATGGTCTGAATTTTGTCACCTGTGACCTCCTGATTAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563257.5 |
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| CDS-3UTR CCA 90 bp | AGAGAACAAAGAGAGGATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCCAACACGTGGCAGCTTaGCTCTATTTTAAATTTAAG | + |
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Preference number: 4 (lower is better) Translates to: REQREDMAFIEKVPIEVPQHVAA*LYFKFK Trigger: CTTAAATTTAAAATAGAGCCAAGCTGCCACGTGTTG...GGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATCCTCTCTTTGTTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR TCA 90 bp | ATTCCAACCCTTATTCAAATTGAGCAGATTACTTCAGACCCTGTGTTTTCATTTTTCATTTCCTCATTCTaGGATAAGGAGGTTAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: IPTLIQIEQITSDPVFSFFISSF*DKEVSP Trigger: TGGACTAACCTCCTTATCTCAGAATGAGGAAATGAA...AAATGAAAACACAGGGTCTGAAGTAATCTGCTCAATTTGAATAAGGGTTGGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000598087.3 |
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| CDS-3UTR TCA 90 bp | ATTCCAACCCTTATTCAAATTGAGCAGATTACTTCAGACCCTGTGTTTTCATTTAACCCTTATTCAAATTaGGCAGATTACTTCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: IPTLIQIEQITSDPVFSFNPYSN*ADYFRP Trigger: GGGTCTGAAGTAATCTGCTCAATTTGAATAAGGGTT...AAATGAAAACACAGGGTCTGAAGTAATCTGCTCAATTTGAATAAGGGTTGGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598087.3 |
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| CDS-3UTR CCA 90 bp | GATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCAGTACAGTCAATTTAAAACTTAGTTCTGATTaGTTGACTCAGTTGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: DMAFIEKVPIEVPSTVNLKLSSD*LTQLSS Trigger: AGAGCTCAACTGAGTCAACCAATCAGAACTAAGTTT...TAAATTGACTGTACTGGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS TCA 90 bp | GCTGAGGCAGGAGAACTGCTTGAACTCGGGAAGCGAAGTTTGCAGTaGGCCGAAATCGTGTCGCTGCACTCCAGCCTGGCGACAGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: AEAGELLELGKRSLQ*AEIVSLHSSLATER Trigger: TCGCTCTGTCGCCAGGCTGGAGTGCAGCGACACGATTTCGGCTCACTGCAAACTTCGCTTCCCGAGTTCAAGCAGTTCTCCTGCCTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS CCA 90 bp | AGGGTGAGGTACTGGGGAAGGGGCTCAGAGCTTCCATGCCCTCCTTaGGTCACCACCCTCCAGGAACCTCCATATATTCAGCTATCTGGA | + |
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Preference number: 5 (lower is better) Translates to: RVRYWGRGSELPCPP*VTTLQEPPYIQLSG Trigger: TCCAGATAGCTGAATATATGGAGGTTCCTGGAGGGTGGTGACCCAAGGAGGGCATGGAAGCTCTGAGCCCCTTCCCCAGTACCTCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CCA 90 bp | GATATTGCAAAGGATAGAGATGAAGAGATGCATAGGGTGAGGTACTaGGGAAGGGGCTCAGAGCTTCCATGCCCTCCTTGGGTCACCACC | + |
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Preference number: 5 (lower is better) Translates to: DIAKDRDEEMHRVRY*GRGSELPCPPWVTT Trigger: GGTGGTGACCCAAGGAGGGCATGGAAGCTCTGAGCCCCTTCCCCAGTACCTCACCCTATGCATCTCTTCATCTCTATCCTTTGCAATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CCA 90 bp | TCCTTGGGTCACCACCCTCCAGGAACCTCCATATATTCAGCTATCTaGAAGCTAACCAAACCCAGTTCCTTGGGGATTTTATGGAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SLGHHPPGTSIYSAI*KLTKPSSLGILWKL Trigger: GAGCTTCCATAAAATCCCCAAGGAACTGGGTTTGGTTAGCTTCCAGATAGCTGAATATATGGAGGTTCCTGGAGGGTGGTGACCCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS-3UTR CAA 90 bp | AAGGAATTTGGAGGAAAGAGGCTATTCCTGTGTACAGTTTGCAAACCAGGGAGGGATTGGTTGACTCAGTaGAGCTCTGGTTGGTCAATA | + |
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Preference number: 5 (lower is better) Translates to: KEFGGKRLFLCTVCKPGRDWLTQ*SSGWSI Trigger: TATTGACCAACCAGAGCTCAACTGAGTCAACCAATC...CCTCCCTGGTTTGCAAACTGTACACAGGAATAGCCTCTTTCCTCCAAATTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS TCA 90 bp | GAATATTTCCATGTTCAAATGTGTGGGGTTTTCCCACACACTAAGTaGGCAATCAGTTCTGCAGCAAACACCAGCTGGGTGTACTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: EYFHVQMCGVFPHTK*AISSAANTSWVYSN Trigger: ATTGGAGTACACCCAGCTGGTGTTTGCTGCAGAACTGATTGCTCACTTAGTGTGTGGGAAAACCCCACACATTTGAACATGGAAATATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS TCA 90 bp | TCCTGGACTAGCCATTTTCTGCCAACCTTGGTGACAAATGCTGTCTaGCATCATACCTCCAACAACTGTGTCTTTAATTTCTGTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: SWTSHFLPTLVTNAV*HHTSNNCVFNFCGI Trigger: AATGCCACAGAAATTAAAGACACAGTTGTTGGAGGTATGATGTCAGACAGCATTTGTCACCAAGGTTGGCAGAAAATGGCTAGTCCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS TCA 90 bp | CTCATTTTCAACTCTCCTGGACTAGCCATTTTCTGCCAACCTTGGTaGCAAATGCTGTCTGACATCATACCTCCAACAACTGTGTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: LIFNSPGLAIFCQPW*QMLSDIIPPTTVSL Trigger: TAAAGACACAGTTGTTGGAGGTATGATGTCAGACAGCATTTGTCACCAAGGTTGGCAGAAAATGGCTAGTCCAGGAGAGTTGAAAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS TCA 90 bp | GCATCTTTTTCCTTTCCTTATGCAGACTCTGTGTTCATACTTCCTTaGATCCACAAGTTGAGTACTGTTCCAACACATCCCGATTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: ASFSFPYADSVFILP*IHKLSTVPTHPDLQ Trigger: CTGCAAATCGGGATGTGTTGGAACAGTACTCAACTTGTGGATTCAAGGAAGTATGAACACAGAGTCTGCATAAGGAAAGGAAAAAGATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS TCA 90 bp | CATCATACCTCCAACAACTGTGTCTTTAATTTCTGTGGCATTCAGTaGGAAGTTCTCACTGCTAGAACTACAACAGATGAAAGGGAAATG | + |
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Preference number: 5 (lower is better) Translates to: HHTSNNCVFNFCGIQ*EVLTARTTTDEREM Trigger: CATTTCCCTTTCATCTGTTGTAGTTCTAGCAGTGAGAACTTCTCACTGAATGCCACAGAAATTAAAGACACAGTTGTTGGAGGTATGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS-3UTR CAA 90 bp | GATATGGCTTTTATAGAGAAAGTTCCTATCGAGGTTCCCAGTACAGTCAATTTACTTAGTTCTGATTGGTaGACTCAGTTGAGCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: DMAFIEKVPIEVPSTVNLLSSDW*TQLSSG Trigger: ACCAGAGCTCAACTGAGTCAACCAATCAGAACTAAG...TAAATTGACTGTACTGGGAACCTCGATAGGAACTTTCTCTATAAAAGCCATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS-3UTR CAA 90 bp | ATTCCAACCCTTATTCAAATTGAGCAGATTACTTCAGACCCTGTGTTTTCATTTCAACCCTTATTCAAATaGAGCAGATTACTTCAGACC | + |
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Preference number: 5 (lower is better) Translates to: IPTLIQIEQITSDPVFSFQPLFK*SRLLQT Trigger: GGTCTGAAGTAATCTGCTCAATTTGAATAAGGGTTG...AAATGAAAACACAGGGTCTGAAGTAATCTGCTCAATTTGAATAAGGGTTGGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598087.3 |
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| CDS TCA 72 bp | AGTCCCAACCCTCTAATGGCGCCTTGGTCTCTCTGGTaGCTAGTTCCCATCCTGAAGCAACCAGAGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SPNPLMAPWSLW*LVPILKQPEAA Trigger: GGCAGCCTCTGGTTGCTTCAGGATGGGAACTAGTCACCAGAGAGACCAAGGCGCCATTAGAGGGTTGGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS GCA 72 bp | AGGCAGGAGAACTGCTTGAACTCGGGAAGCGAAGTTTaGAGTGAGCCGAAATCGTGTCGCTGCACTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RQENCLNSGSEV*SEPKSCRCTPA Trigger: GGCTGGAGTGCAGCGACACGATTTCGGCTCACTGCAAACTTCGCTTCCCGAGTTCAAGCAGTTCTCCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620307.4 |
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| CDS CAA 90 bp | GAGGTCGGGAATGAGGCTGTTAAGTCCCAACCCTCTAATGGCGCCTaGGTCTCTCTGGTGACTAGTTCCCATCCTGAAGCAACCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: EVGNEAVKSQPSNGA*VSLVTSSHPEATRG Trigger: GCCTCTGGTTGCTTCAGGATGGGAACTAGTCACCAGAGAGACCAAGGCGCCATTAGAGGGTTGGGACTTAACAGCCTCATTCCCGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CCA 72 bp | AAGGATAGAGATGAAGAGATGCATAGGGTGAGGTACTaGGGAAGGGGCTCAGAGCTTCCATGCCCTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: KDRDEEMHRVRY*GRGSELPCPPW Trigger: CCAAGGAGGGCATGGAAGCTCTGAGCCCCTTCCCCAGTACCTCACCCTATGCATCTCTTCATCTCTATCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS TCA 72 bp | CATGTTCAAATGTGTGGGGTTTTCCCACACACTAAGTaGGCAATCAGTTCTGCAGCAAACACCAGCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: HVQMCGVFPHTK*AISSAANTSWV Trigger: CACCCAGCTGGTGTTTGCTGCAGAACTGATTGCTCACTTAGTGTGTGGGAAAACCCCACACATTTGAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CAA 90 bp | ACAGATGGGCTTCAAGTTTCGGTTCACATGACCCCCTCTTTGGGTTaGATTAATTTGTCAGAAAGGCTCACAGAACTCAGGGAAATACCT | + |
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Preference number: 6 (lower is better) Translates to: TDGLQVSVHMTPSLG*INLSERLTELREIP Trigger: AGGTATTTCCCTGAGTTCTGTGAGCCTTTCTGACAAATTAATCAAACCCAAAGAGGGGGTCATGTGAACCGAAACTTGAAGCCCATCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CCA 72 bp | CGATTTGCAGATGTGGAAGCTCATTTTCAACTCTCCTaGACTAGCCATTTTCTGCCAACCTTGGTGACAAAT | + |
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Preference number: 6 (lower is better) Translates to: RFADVEAHFQLS*TSHFLPTLVTN Trigger: ATTTGTCACCAAGGTTGGCAGAAAATGGCTAGTCCAGGAGAGTTGAAAATGAGCTTCCACATCTGCAAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CCA 72 bp | TTGAGTACTGTTCCAACACATCCCGATTTGCAGATGTaGAAGCTCATTTTCAACTCTCCTGGACTAGCCATT | + |
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Preference number: 6 (lower is better) Translates to: LSTVPTHPDLQM*KLIFNSPGLAI Trigger: AATGGCTAGTCCAGGAGAGTTGAAAATGAGCTTCCACATCTGCAAATCGGGATGTGTTGGAACAGTACTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CAA 72 bp | TCGGTTCACATGACCCCCTCTTTGGGTTTGATTAATTaGTCAGAAAGGCTCACAGAACTCAGGGAAATACCT | + |
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Preference number: 6 (lower is better) Translates to: SVHMTPSLGLIN*SERLTELREIP Trigger: AGGTATTTCCCTGAGTTCTGTGAGCCTTTCTGACAAATTAATCAAACCCAAAGAGGGGGTCATGTGAACCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CAA 72 bp | CTTCAAGTTTCGGTTCACATGACCCCCTCTTTGGGTTaGATTAATTTGTCAGAAAGGCTCACAGAACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LQVSVHMTPSLG*INLSERLTELR Trigger: CCTGAGTTCTGTGAGCCTTTCTGACAAATTAATCAAACCCAAAGAGGGGGTCATGTGAACCGAAACTTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CAA 72 bp | GATGGGCTTCAAGTTTCGGTTCACATGACCCCCTCTTaGGGTTTGATTAATTTGTCAGAAAGGCTCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: DGLQVSVHMTPS*GLINLSERLTE Trigger: TTCTGTGAGCCTTTCTGACAAATTAATCAAACCCAAAGAGGGGGTCATGTGAACCGAAACTTGAAGCCCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CAA 90 bp | CTTCAAGTTTCGGTTCACATGACCCCCTCTTTGGGTTTGATTAATTaGTCAGAAAGGCTCACAGAACTCAGGGAAATACCTAACGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LQVSVHMTPSLGLIN*SERLTELREIPNVD Trigger: GTCAACGTTAGGTATTTCCCTGAGTTCTGTGAGCCTTTCTGACAAATTAATCAAACCCAAAGAGGGGGTCATGTGAACCGAAACTTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS TCA 72 bp | AGCCATTTTCTGCCAACCTTGGTGACAAATGCTGTCTaGCATCATACCTCCAACAACTGTGTCTTTAATTTC | + |
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Preference number: 6 (lower is better) Translates to: SHFLPTLVTNAV*HHTSNNCVFNF Trigger: GAAATTAAAGACACAGTTGTTGGAGGTATGATGTCAGACAGCATTTGTCACCAAGGTTGGCAGAAAATGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CAA 72 bp | TTCCTTTCCTTATGCAGACTCTGTGTTCATACTTCCTaGAATCCACAAGTTGAGTACTGTTCCAACACATCC | + |
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Preference number: 6 (lower is better) Translates to: FLSLCRLCVHTS*NPQVEYCSNTS Trigger: GGATGTGTTGGAACAGTACTCAACTTGTGGATTCAAGGAAGTATGAACACAGAGTCTGCATAAGGAAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CAA 72 bp | TATTCAGCTATCTGGAAGCTAACCAAACCCAGTTCCTaGGGGATTTTATGGAAGCTCCATTACATAGGTATG | + |
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Preference number: 6 (lower is better) Translates to: YSAIWKLTKPSS*GILWKLHYIGM Trigger: CATACCTATGTAATGGAGCTTCCATAAAATCCCCAAGGAACTGGGTTTGGTTAGCTTCCAGATAGCTGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS CAA 90 bp | TGCATCTTTTTCCTTTCCTTATGCAGACTCTGTGTTCATACTTCCTaGAATCCACAAGTTGAGTACTGTTCCAACACATCCCGATTTGCA | + |
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Preference number: 6 (lower is better) Translates to: CIFFLSLCRLCVHTS*NPQVEYCSNTSRFA Trigger: TGCAAATCGGGATGTGTTGGAACAGTACTCAACTTGTGGATTCAAGGAAGTATGAACACAGAGTCTGCATAAGGAAAGGAAAAAGATGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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| CDS TCA 72 bp | TCCAACAACTGTGTCTTTAATTTCTGTGGCATTCAGTaGGAAGTTCTCACTGCTAGAACTACAACAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: SNNCVFNFCGIQ*EVLTARTTTDE Trigger: TTCATCTGTTGTAGTTCTAGCAGTGAGAACTTCTCACTGAATGCCACAGAAATTAAAGACACAGTTGTTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455723.1 |
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