Pregenerated sensors for TMPRSS11F (Homo sapiens)
Ensembl gene IDs: ENSG00000198092Ensembl transcript IDs: ENST00000356291.3
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTaGTCCTACGTATGTAAAGGCCACCTCAGGATATTAGATTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: CLSFAVSSSLMVERV*SYVCKGHLRILDLS Trigger: AGACAAATCTAATATCCTGAGGTGGCCTTTACATACGTAGGACCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR TCA 90 bp | TTGCACACTGAAGGTCCACTTATCAGTTCTAGAATGTTGAAGCCCTaGGTCTTCAGGGAAGACTGTTCTTTTTCACTAGAAGAATCTCAC | + |
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Preference number: 1 (lower is better) Translates to: LHTEGPLISSRMLKP*VFREDCSFSLEESH Trigger: GTGAGATTCTTCTAGTGAAAAAGAACAGTCTTCCCTGAAGACTCAGGGCTTCAACATTCTAGAACTGATAAGTGGACCTTCAGTGTGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR TCA 90 bp | CCACTTATTTATCTTATTAGGAAGTATCACAAGCAGTTTCCCTTGTaGGTAAGGAATAGGTGCTGTCTGTCATTTGCTGTGTCTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: PLIYLIRKYHKQFPL*VRNRCCLSFAVSSS Trigger: GGAAGAAGACACAGCAAATGACAGACAGCACCTATTCCTTACTCACAAGGGAAACTGCTTGTGATACTTCCTAATAAGATAAATAAGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR TCA 90 bp | CTGTTCTTTTTCACTAGAAGAATCTCACATGCTCCAGGTATTATATaGGGTAAGATTTTGGCATTACTGGCAGCTCTTCATATCCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: LFFFTRRISHAPGII*GKILALLAALHILW Trigger: CCACAGGATATGAAGAGCTGCCAGTAATGCCAAAATCTTACCTCATATAATACCTGGAGCATGTGAGATTCTTCTAGTGAAAAAGAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR TCA 90 bp | GTAAGATTTTGGCATTACTGGCAGCTCTTCATATCCTGTGGAAAATaGTGTTCCTGTCTTCAATTGAGGGAAACCACTTATTTATCTTAT | + |
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Preference number: 1 (lower is better) Translates to: VRFWHYWQLFISCGK*CSCLQLRETTYLSY Trigger: ATAAGATAAATAAGTGGTTTCCCTCAATTGAAGACAGGAACATCATTTTCCACAGGATATGAAGAGCTGCCAGTAATGCCAAAATCTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTGTATTATTAGATATAAGCCCAGTTCAAGTCATAATGCAAATCCCATGCAGAATGTTGAAGCCCTaGGTCTTCAGGGAAGACTGT | + |
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Preference number: 2 (lower is better) Translates to: CSVLLDISPVQVIMQIPCRMLKP*VFREDC Trigger: ACAGTCTTCCCTGAAGACTCAGGGCTTCAACATTCT...GCATGGGATTTGCATTATGACTTGAACTGGGCTTATATCTAATAATACAGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR-3UTR GCA 90 bp | ATAGTGCTCTGTATTATTAGATATAAGCCCAGTTCAAGTCATAATGCAAATCCCAGTATCAGCTCTGTGTaGCATGTGTATAACTCATGG | + |
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Preference number: 2 (lower is better) Translates to: IVLCIIRYKPSSSHNANPSISSV*HVYNSW Trigger: CCATGAGTTATACACATGGCACACAGAGCTGATACT...GGGATTTGCATTATGACTTGAACTGGGCTTATATCTAATAATACAGAGCACTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTCCTAGGTCTGAAGGGCTTCTaGACATCTAGCAAAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: LSVICCVFFPHGREGLVLGLKGF*TSSKST Trigger: AGTGCTTTTGCTAGATGTCAAGAAGCCCTTCAGACC...TAGGACCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR-3UTR CAA 90 bp | AATCCCATGCTTCTCCATTCTTGCACACTGAAGGTCCACTTATCAGTTCTAGAAGGTGCTGTCTGTCATTaGCTGTGTCTTCTTCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: NPMLLHSCTLKVHLSVLEGAVCH*LCLLPS Trigger: TGAGGGAAGAAGACACAGCAAATGACAGACAGCACC...TTCTAGAACTGATAAGTGGACCTTCAGTGTGCAAGAATGGAGAAGCATGGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR CCA 72 bp | TTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTaGTCCTACGTATGTAAAGGCCACCTCAGGATATTA | + |
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Preference number: 3 (lower is better) Translates to: FAVSSSLMVERV*SYVCKGHLRIL Trigger: TAATATCCTGAGGTGGCCTTTACATACGTAGGACCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR TCA 72 bp | TGCACACTGAAGGTCCACTTATCAGTTCTAGAATGTTaGAGCCCTGAGTCTTCAGGGAAGACTGTTCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: CTLKVHLSVLEC*SPESSGKTVLF Trigger: AAAAAGAACAGTCTTCCCTGAAGACTCAGGGCTTCAACATTCTAGAACTGATAAGTGGACCTTCAGTGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR TCA 72 bp | GAAGGTCCACTTATCAGTTCTAGAATGTTGAAGCCCTaGGTCTTCAGGGAAGACTGTTCTTTTTCACTAGAA | + |
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Preference number: 3 (lower is better) Translates to: EGPLISSRMLKP*VFREDCSFSLE Trigger: TTCTAGTGAAAAAGAACAGTCTTCCCTGAAGACTCAGGGCTTCAACATTCTAGAACTGATAAGTGGACCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR TCA 72 bp | TATCTTATTAGGAAGTATCACAAGCAGTTTCCCTTGTaGGTAAGGAATAGGTGCTGTCTGTCATTTGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: YLIRKYHKQFPL*VRNRCCLSFAV Trigger: CACAGCAAATGACAGACAGCACCTATTCCTTACTCACAAGGGAAACTGCTTGTGATACTTCCTAATAAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| 3UTR CCA 72 bp | TCTCACATGCTCCAGGTATTATATGAGGTAAGATTTTaGCATTACTGGCAGCTCTTCATATCCTGTGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: SHMLQVLYEVRF*HYWQLFISCGK Trigger: TTTTCCACAGGATATGAAGAGCTGCCAGTAATGCCAAAATCTTACCTCATATAATACCTGGAGCATGTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | ATACGCAGGAGTATCAGCTCTGTGTGCCATGTGTATAACTCATGGGCAATCCACAGGCTGGCTCCACACTaGTGGCCTGACCCTATGAGC | + |
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Preference number: 4 (lower is better) Translates to: IRRSISSVCHVYNSWAIHRLAPH*WPDPMS Trigger: GCTCATAGGGTCAGGCCATCAGTGTGGAGCCAGCCT...GTGGATTGCCCATGAGTTATACACATGGCACACAGAGCTGATACTCCTGCGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | AATCCCATGCTTCTCCATTCTTGCACACTGAAGGTCCACTTATCAGTTCTAGAATCCACACTGATGGCCTaGCCCTATGAGCTGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: NPMLLHSCTLKVHLSVLESTLMA*PYELEA Trigger: AGCCTCCAGCTCATAGGGTCAGGCCATCAGTGTGGA...TTCTAGAACTGATAAGTGGACCTTCAGTGTGCAAGAATGGAGAAGCATGGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | AGGTGCTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGAAGCAGTTTCCCTTGTaGGTAAGGAATAGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RCCLSFAVSSSLMVERVWKQFPL*VRNRCC Trigger: ACAGCACCTATTCCTTACTCACAAGGGAAACTGCTT...CCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAGCACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | TGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTCCTACAGAATGTTGAAGCCCTaGGTCTTCAGGGAAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: CLSFAVSSSLMVERVWSYRMLKP*VFREDC Trigger: ACAGTCTTCCCTGAAGACTCAGGGCTTCAACATTCT...GTAGGACCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | CTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTCCTATCAGTTCTAGAATGTTaGAGCCCTGAGTCTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LSVICCVFFPHGREGLVLSVLEC*SPESSG Trigger: CCCTGAAGACTCAGGGCTTCAACATTCTAGAACTGA...TAGGACCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CCA 90 bp | TGCTCTGTATTATTAGATATAAGCCCAGTTCAAGTCATAATGCAAATCCCATGCCCTGACCCTATGAGCTaGAGGCTGGCCTGCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: CSVLLDISPVQVIMQIPCPDPMS*RLACHG Trigger: GCCATGGCAGGCCAGCCTCCAGCTCATAGGGTCAGG...GCATGGGATTTGCATTATGACTTGAACTGGGCTTATATCTAATAATACAGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | TGCTCTGTATTATTAGATATAAGCCCAGTTCAAGTCATAATGCAAATCCCATGCCAGGTGCGTACATCATaGACCCAGGACTGGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CSVLLDISPVQVIMQIPCQVRTS*TQDWGS Trigger: GCTGCCCCAGTCCTGGGTTCATGATGTACGCACCTG...GCATGGGATTTGCATTATGACTTGAACTGGGCTTATATCTAATAATACAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | TGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTCCTACTGGCAACTTTATAGATaGGTCTGGGAGGCAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: CLSFAVSSSLMVERVWSYWQLYR*VWEANS Trigger: AGAGTTTGCCTCCCAGACTCATCTATAAAGTTGCCA...GTAGGACCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | AGGTGCTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGCTACATACCAGTCTTTaGGGCAATCCAATCTCGATA | + |
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Preference number: 4 (lower is better) Translates to: RCCLSFAVSSSLMVERVWLHTSL*GNPISI Trigger: TATCGAGATTGGATTGCCTCAAAGACTGGTATGTAG...CCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAGCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | CTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTCCTATCCATTCTTGCACACTaGAGGTCCACTTATCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LSVICCVFFPHGREGLVLSILAH*RSTYQF Trigger: GAACTGATAAGTGGACCTTCAGTGTGCAAGAATGGA...TAGGACCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR GCA 90 bp | CTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTCCTAGTGCTGTCTGTCATTTaGTGTGTCTTCTTCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LSVICCVFFPHGREGLVLVLSVI*CVFFPH Trigger: ATGAGGGAAGAAGACACAGCAAATGACAGACAGCAC...TAGGACCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | TGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTCCTACACTCCAGTAGAGAGCTaGACCAAAGCAATGTCATTT | + |
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Preference number: 4 (lower is better) Translates to: CLSFAVSSSLMVERVWSYTPVES*TKAMSF Trigger: AAATGACATTGCTTTGGTTCAGCTCTCTACTGGAGT...GTAGGACCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CCA 90 bp | AGGTGCTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTTATGGTTTCCACTCTaGCTTGCCGAAGTGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: RCCLSFAVSSSLMVERVWLWFPL*LAEVYF Trigger: AAAATACACTTCGGCAAGCCAGAGTGGAAACCATAA...CCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CCA 90 bp | ATACGCAGGAGTATCAGCTCTGTGTGCCATGTGTATAACTCATGGGCAATCCACAGCACTATCAGTAGATaGGTATCGAAATATGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: IRRSISSVCHVYNSWAIHSTISR*VSKYEH Trigger: GTGCTCATATTTCGATACCCATCTACTGATAGTGCT...GTGGATTGCCCATGAGTTATACACATGGCACACAGAGCTGATACTCCTGCGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CCA 90 bp | AATCCCATGCTTCTCCATTCTTGCACACTGAAGGTCCACTTATCAGTTCTAGAAACACATCAGTGCTTATaGTTTCCACTCTGGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: NPMLLHSCTLKVHLSVLETHQCL*FPLWLA Trigger: GGCAAGCCAGAGTGGAAACCATAAGCACTGATGTGT...TTCTAGAACTGATAAGTGGACCTTCAGTGTGCAAGAATGGAGAAGCATGGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | ATACGCAGGAGTATCAGCTCTGTGTGCCATGTGTATAACTCATGGGCAATCCACATATCCTGTGGAAAATaGTGTTCCTGTCTTCAATTG | + |
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Preference number: 4 (lower is better) Translates to: IRRSISSVCHVYNSWAIHISCGK*CSCLQL Trigger: CAATTGAAGACAGGAACATCATTTTCCACAGGATAT...GTGGATTGCCCATGAGTTATACACATGGCACACAGAGCTGATACTCCTGCGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR GCA 90 bp | GTATTATATGAGGTAAGATTTTGGCATTACTGGCAGCTCTTCATATCCTGTGGACCAAAAGCAGTGAGCTaGTGTGAGCAGCCATGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VLYEVRFWHYWQLFISCGPKAVS*CEQPCV Trigger: AACACATGGCTGCTCACAGCAGCTCACTGCTTTTGG...TCCACAGGATATGAAGAGCTGCCAGTAATGCCAAAATCTTACCTCATATAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR GCA 90 bp | AATCCCATGCTTCTCCATTCTTGCACACTGAAGGTCCACTTATCAGTTCTAGAACACATTTCGTTTCACTaGGGGTGGTGTTATAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: NPMLLHSCTLKVHLSVLEHISFH*GWCYSC Trigger: GCAACTATAACACCACCCGCAGTGAAACGAAATGTG...TTCTAGAACTGATAAGTGGACCTTCAGTGTGCAAGAATGGAGAAGCATGGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | AATCCCATGCTTCTCCATTCTTGCACACTGAAGGTCCACTTATCAGTTCTAGAACTACAATTGCTAATGTaGAAAGAGCTAGCCGTACTG | + |
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Preference number: 4 (lower is better) Translates to: NPMLLHSCTLKVHLSVLELQLLM*KELAVL Trigger: CAGTACGGCTAGCTCTTTTCACATTAGCAATTGTAG...TTCTAGAACTGATAAGTGGACCTTCAGTGTGCAAGAATGGAGAAGCATGGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR GCA 90 bp | AATCCCATGCTTCTCCATTCTTGCACACTGAAGGTCCACTTATCAGTTCTAGAAGTTTCCACTCTGGCTTaGCGAAGTGTATTTTGTATA | + |
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Preference number: 4 (lower is better) Translates to: NPMLLHSCTLKVHLSVLEVSTLA*RSVFCI Trigger: TATACAAAATACACTTCGGCAAGCCAGAGTGGAAAC...TTCTAGAACTGATAAGTGGACCTTCAGTGTGCAAGAATGGAGAAGCATGGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CCA 90 bp | GTATTATATGAGGTAAGATTTTGGCATTACTGGCAGCTCTTCATATCCTGTGGATCGTTTCACTGCGGGTaGTGTTATAGTTGCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: VLYEVRFWHYWQLFISCGSFHCG*CYSCTK Trigger: TTTGGTGCAACTATAACACCACCCGCAGTGAAACGA...TCCACAGGATATGAAGAGCTGCCAGTAATGCCAAAATCTTACCTCATATAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CCA 90 bp | AATCCCATGCTTCTCCATTCTTGCACACTGAAGGTCCACTTATCAGTTCTAGAACATGTGTATAACTCATaGGCAATCCACACTACATAC | + |
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Preference number: 4 (lower is better) Translates to: NPMLLHSCTLKVHLSVLEHVYNS*AIHTTY Trigger: GTATGTAGTGTGGATTGCCCATGAGTTATACACATG...TTCTAGAACTGATAAGTGGACCTTCAGTGTGCAAGAATGGAGAAGCATGGGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CCA 90 bp | GTATTATATGAGGTAAGATTTTGGCATTACTGGCAGCTCTTCATATCCTGTGGAATGGTAGAGAGGGTTTaGTCCTACGTATGTAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VLYEVRFWHYWQLFISCGMVERV*SYVCKG Trigger: GCCTTTACATACGTAGGACCAAACCCTCTCTACCAT...TCCACAGGATATGAAGAGCTGCCAGTAATGCCAAAATCTTACCTCATATAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | ATAGTGCTCTGTATTATTAGATATAAGCCCAGTTCAAGTCATAATGCAAATCCCTTTTTCCAAAAGCAGTaGGCTGCTGTGAGCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IVLCIIRYKPSSSHNANPFFQKQ*AAVSSH Trigger: ATGGCTGCTCACAGCAGCTCACTGCTTTTGGAAAAA...GGGATTTGCATTATGACTTGAACTGGGCTTATATCTAATAATACAGAGCACTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | AATCCCATGCTTCTCCATTCTTGCACACTGAAGGTCCACTTATCAGTTCTAGAAGTTCCTGTCTTCAATTaGGGGAAACCACTTATTTAT | + |
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Preference number: 4 (lower is better) Translates to: NPMLLHSCTLKVHLSVLEVPVFN*GKPLIY Trigger: ATAAATAAGTGGTTTCCCTCAATTGAAGACAGGAAC...TTCTAGAACTGATAAGTGGACCTTCAGTGTGCAAGAATGGAGAAGCATGGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR GCA 90 bp | AAACAATACAAAATACGCAGGAGTATCAGCTCTGTGTGCCATGTGTATAACTCAGGGTGGTGTTATAGTTaGACCAAAAGTAGCAATCCA | + |
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Preference number: 4 (lower is better) Translates to: KQYKIRRSISSVCHVYNSGWCYS*TKSSNP Trigger: TGGATTGCTACTTTTGGTGCAACTATAACACCACCC...TGAGTTATACACATGGCACACAGAGCTGATACTCCTGCGTATTTTGTATTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR GCA 90 bp | ATGAATTTAAACAATACAAAATACGCAGGAGTATCAGCTCTGTGTGCCATGTGTTGTTACACACATCAGTaGTTATGGTTTCCACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: MNLNNTKYAGVSALCAMCCYTHQ*LWFPLW Trigger: CCAGAGTGGAAACCATAAGCACTGATGTGTGTAACA...ACACATGGCACACAGAGCTGATACTCCTGCGTATTTTGTATTGTTTAAATTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CCA 90 bp | GTATTATATGAGGTAAGATTTTGGCATTACTGGCAGCTCTTCATATCCTGTGGAAGATTTTGGCATTACTaGCAGCTCTTCATATCCTGT | + |
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Preference number: 4 (lower is better) Translates to: VLYEVRFWHYWQLFISCGRFWHY*QLFISC Trigger: ACAGGATATGAAGAGCTGCCAGTAATGCCAAAATCT...TCCACAGGATATGAAGAGCTGCCAGTAATGCCAAAATCTTACCTCATATAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CCA 90 bp | AAACAATACAAAATACGCAGGAGTATCAGCTCTGTGTGCCATGTGTATAACTCATATGAGGTAAGATTTTaGCATTACTGGCAGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KQYKIRRSISSVCHVYNSYEVRF*HYWQLF Trigger: GAAGAGCTGCCAGTAATGCCAAAATCTTACCTCATA...TGAGTTATACACATGGCACACAGAGCTGATACTCCTGCGTATTTTGTATTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | ATAGTGCTCTGTATTATTAGATATAAGCCCAGTTCAAGTCATAATGCAAATCCCTTCCACAGCGACTGTTaGGAAGATTCCTCATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: IVLCIIRYKPSSSHNANPFHSDC*EDSSSF Trigger: AAAAGATGAGGAATCTTCTCAACAGTCGCTGTGGAA...GGGATTTGCATTATGACTTGAACTGGGCTTATATCTAATAATACAGAGCACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | GTATTATATGAGGTAAGATTTTGGCATTACTGGCAGCTCTTCATATCCTGTGGATCTCTGGACTATATTTaGAAACTCAACTCCAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VLYEVRFWHYWQLFISCGSLDYI*KLNSSR Trigger: TCTACTGGAGTTGAGTTTTCAAATATAGTCCAGAGA...TCCACAGGATATGAAGAGCTGCCAGTAATGCCAAAATCTTACCTCATATAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR GCA 90 bp | ATAGTGCTCTGTATTATTAGATATAAGCCCAGTTCAAGTCATAATGCAAATCCCATGCTTCTCCATTCTTaGACACTGAAGGTCCACTTA | + |
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Preference number: 4 (lower is better) Translates to: IVLCIIRYKPSSSHNANPMLLHS*TLKVHL Trigger: TAAGTGGACCTTCAGTGTGCAAGAATGGAGAAGCAT...GGGATTTGCATTATGACTTGAACTGGGCTTATATCTAATAATACAGAGCACTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR GCA 90 bp | ATGAATTTAAACAATACAAAATACGCAGGAGTATCAGCTCTGTGTGCCATGTGTCTTAACAACACAACATaGTTCCTGAAGCTAGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: MNLNNTKYAGVSALCAMCLNNTT*FLKLVL Trigger: AAGCACTAGCTTCAGGAAGCATGTTGTGTTGTTAAG...ACACATGGCACACAGAGCTGATACTCCTGCGTATTTTGTATTGTTTAAATTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR TCA 90 bp | TGCTCTGTATTATTAGATATAAGCCCAGTTCAAGTCATAATGCAAATCCCATGCAGGTGTGAGTCTAAATaGTGGTTTGTTTATGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: CSVLLDISPVQVIMQIPCRCESK*WFVYGQ Trigger: TTGACCATAAACAAACCATCATTTAGACTCACACCT...GCATGGGATTTGCATTATGACTTGAACTGGGCTTATATCTAATAATACAGAGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR GCA 90 bp | ATAGTGCTCTGTATTATTAGATATAAGCCCAGTTCAAGTCATAATGCAAATCCCAGAATCTCCCTTACATaGATCTATTTTTCCTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: IVLCIIRYKPSSSHNANPRISLT*IYFSFH Trigger: ATGGAAGGAAAAATAGATGCATGTAAGGGAGATTCT...GGGATTTGCATTATGACTTGAACTGGGCTTATATCTAATAATACAGAGCACTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CAA 90 bp | AGGTGCTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGAGATTCCTCATCTTTTaGCTGTCAATAGGTGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: RCCLSFAVSSSLMVERVWRFLIF*LSIGVS Trigger: ACTCACACCTATTGACAGCAAAAAGATGAGGAATCT...CCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CAA 90 bp | CTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTCCTAATTCCACAGCGACTGTaGAGAAGATTCCTCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: LSVICCVFFPHGREGLVLIPQRL*RRFLIF Trigger: AAAGATGAGGAATCTTCTCAACAGTCGCTGTGGAAT...TAGGACCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CAA 90 bp | AGGTGCTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTTGCCGAAGTGTATTTaGTATAGGTCCATCATCTAC | + |
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Preference number: 5 (lower is better) Translates to: RCCLSFAVSSSLMVERVWLPKCI*YRSIIY Trigger: GTAGATGATGGACCTATACAAAATACACTTCGGCAA...CCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAGCACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CAA 90 bp | CTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTCCTAACTACATACCAGTCTTaGAGGCAATCCAATCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: LSVICCVFFPHGREGLVLTTYQS*RQSNLD Trigger: ATCGAGATTGGATTGCCTCAAAGACTGGTATGTAGT...TAGGACCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS TCA 90 bp | GCCATGTGTATAACTCATGGGCAATCCACACTACATACCAGTCTTTaGGGCAATCCAATCTCGATACTTAGTTACTCTGGTGTAGACTCC | + |
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Preference number: 5 (lower is better) Translates to: AMCITHGQSTLHTSL*GNPISILSYSGVDS Trigger: GGAGTCTACACCAGAGTAACTAAGTATCGAGATTGGATTGCCTCAAAGACTGGTATGTAGTGTGGATTGCCCATGAGTTATACACATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CAA 90 bp | AGGTGCTGTCTGTCATTTGCTGTGTCTTCTTCCCTCATGGTAGAGAGGGTTTGGTTAAAATGTCAACTGTaGAGGTTAGAGATAGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: RCCLSFAVSSSLMVERVWLKCQL*RLEIVL Trigger: GAGCACTATCTCTAACCTCAACAGTTGACATTTTAA...CCAAACCCTCTCTACCATGAGGGAAGAAGACACAGCAAATGACAGACAGCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CAA 90 bp | AATCCCATGCTTCTCCATTCTTGCACACTGAAGGTCCACTTATCAGTTCTAGAATCCTTGGACAATTCTTaGAGTAGAAGAGGATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: NPMLLHSCTLKVHLSVLESLDNS*SRRGCW Trigger: CCAGCATCCTCTTCTACTCAAAGAATTGTCCAAGGA...TTCTAGAACTGATAAGTGGACCTTCAGTGTGCAAGAATGGAGAAGCATGGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CAA 90 bp | ATGAATTTAAACAATACAAAATACGCAGGAGTATCAGCTCTGTGTGCCATGTGTGGTCTGAAGGGCTTCTaGACATCTAGCAAAAGCACT | + |
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Preference number: 5 (lower is better) Translates to: MNLNNTKYAGVSALCAMCGLKGF*TSSKST Trigger: AGTGCTTTTGCTAGATGTCAAGAAGCCCTTCAGACC...ACACATGGCACACAGAGCTGATACTCCTGCGTATTTTGTATTGTTTAAATTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS-3UTR CAA 90 bp | AAACAATACAAAATACGCAGGAGTATCAGCTCTGTGTGCCATGTGTATAACTCAAGCTGTTTCCCTTCCTaGGACAATTCTTTGAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: KQYKIRRSISSVCHVYNSSCFPS*DNSLSR Trigger: TCTACTCAAAGAATTGTCCAAGGAAGGGAAACAGCT...TGAGTTATACACATGGCACACAGAGCTGATACTCCTGCGTATTTTGTATTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS GCA 90 bp | AATGAATTTAAACAATACAAAATACGCAGGAGTATCAGCTCTGTGTaGCATGTGTATAACTCATGGGCAATCCACACTACATACCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: NEFKQYKIRRSISSV*HVYNSWAIHTTYQS Trigger: AGACTGGTATGTAGTGTGGATTGCCCATGAGTTATACACATGGCACACAGAGCTGATACTCCTGCGTATTTTGTATTGTTTAAATTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS CCA 72 bp | AGGAGTATCAGCTCTGTGTGCCATGTGTATAACTCATaGGCAATCCACACTACATACCAGTCTTTGAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: RSISSVCHVYNS*AIHTTYQSLRQ Trigger: TTGCCTCAAAGACTGGTATGTAGTGTGGATTGCCCATGAGTTATACACATGGCACACAGAGCTGATACTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS GCA 72 bp | CCTCACATTTCGTTTCACTGCGGGTGGTGTTATAGTTaGACCAAAAGTAGCAATCCATTGAGTTGGGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PHISFHCGWCYS*TKSSNPLSWVF Trigger: AAAGACCCAACTCAATGGATTGCTACTTTTGGTGCAACTATAACACCACCCGCAGTGAAACGAAATGTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS TCA 72 bp | GCTAGCCGTACTGAGTCCCAAAATTGCTGCTTTCTTTaGTATTCAGCTCGTGAGAATTCAGCTTCTGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: ASRTESQNCCFL*YSARENSASEN Trigger: ATTTTCAGAAGCTGAATTCTCACGAGCTGAATATCAAAGAAAGCAGCAATTTTGGGACTCAGTACGGCTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS TCA 72 bp | ATAACTCATGGGCAATCCACACTACATACCAGTCTTTaGGGCAATCCAATCTCGATACTTAGTTACTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: ITHGQSTLHTSL*GNPISILSYSG Trigger: ACCAGAGTAACTAAGTATCGAGATTGGATTGCCTCAAAGACTGGTATGTAGTGTGGATTGCCCATGAGTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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| CDS GCA 72 bp | AAACAATACAAAATACGCAGGAGTATCAGCTCTGTGTaGCATGTGTATAACTCATGGGCAATCCACACTACA | + |
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Preference number: 6 (lower is better) Translates to: KQYKIRRSISSV*HVYNSWAIHTT Trigger: TGTAGTGTGGATTGCCCATGAGTTATACACATGGCACACAGAGCTGATACTCCTGCGTATTTTGTATTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356291.3 |
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