Pregenerated sensors for TMPRSS11D (Homo sapiens)
Ensembl gene IDs: ENSG00000153802Ensembl transcript IDs: ENST00000283916.11, ENST00000502573.5, ENST00000505533.1, ENST00000508409.5, ENST00000509584.5, ENST00000511931.1, ENST00000514868.1
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACCCATCAGACCTGTGCAGGTTCCTCTACTATACATGCTCAAGGTTCCTGTTCTCCTGCATACAGACTTTaGAACAGGGATGCACTTGTT | + |
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Preference number: 2 (lower is better) Translates to: THQTCAGSSTIHAQGSCSPAYRL*NRDALV Trigger: AACAAGTGCATCCCTGTTGCAAAGTCTGTATGCAGG...AGAACAGGAACCTTGAGCATGTATAGTAGAGGAACCTGCACAGGTCTGATGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAGTCCTGATGCCCAGATGCAGGGAGTTAGCTTGTAGAAGGAGGAAGCTCATCCACTATTTCCTATaGAAGCATGTTCTTACAGAA | + |
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Preference number: 2 (lower is better) Translates to: GAVLMPRCRELACRRRKLIHYFL*KHVLTE Trigger: TTCTGTAAGAACATGCTTCCATAGGAAATAGTGGAT...GAGCTTCCTCCTTCTACAAGCTAACTCCCTGCATCTGGGCATCAGGACTGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| 3UTR-3UTR GCA 90 bp | GCGTTTGACGACCCTTTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGACCCATCAGACCTGTaGAGGTTCCTCTACTATACA | + |
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Preference number: 2 (lower is better) Translates to: AFDDPFTLKNITASDRKSDPSDL*RFLYYT Trigger: TGTATAGTAGAGGAACCTGCACAGGTCTGATGGGTC...AGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAAAGGGTCGTCAAACGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| 3UTR-3UTR TCA 90 bp | TTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTAGTGGGACGTTCTGTCTCAGTTGAGGAGTaGACTATTTTAGCTTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: FTLKNITASDRKSVVGRSVSVEE*TILAFA Trigger: GGCAAAAGCTAAAATAGTTCACTCCTCAACTGAGAC...AGAACGTCCCACTACAGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| 3UTR-3UTR GCA 90 bp | GCGTTTGACGACCCTTTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTCATGTTTCCACAGTTTaGTTACTTCTCATCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: AFDDPFTLKNITASDRKSHVSTV*LLLILS Trigger: ACTGAGGATGAGAAGTAAGCAAACTGTGGAAACATG...AGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAAAGGGTCGTCAAACGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| 3UTR-3UTR GCA 90 bp | GCGTTTGACGACCCTTTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTACAGCCACAGTACTATaGAACATTCATATAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: AFDDPFTLKNITASDRKSTATVL*NIHIVL Trigger: GAGAACTATATGAATGTTGCATAGTACTGTGGCTGT...AGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAAAGGGTCGTCAAACGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| 3UTR GCA 72 bp | GACCCATCAGACCTGTGCAGGTTCCTCTACTATACATaGTCAAGGTTCCTGTTCTTCTCACTACGGGCATTT | + |
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Preference number: 3 (lower is better) Translates to: DPSDLCRFLYYT*SRFLFFSLRAF Trigger: AAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTAGAGGAACCTGCACAGGTCTGATGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| 3UTR-3UTR CAA 90 bp | TTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTAGTGGGACGTTCTGCATGTTTCCACAGTTaGCTTACTTCTCATCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: FTLKNITASDRKSVVGRSACFHS*LTSHPQ Trigger: CTGAGGATGAGAAGTAAGCAAACTGTGGAAACATGC...AGAACGTCCCACTACAGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | GGAGCAGTCCTGATGCCCAGATGCAGGGAGTTAGCTTGTAGAAGGAGGAAGCTCTGTATGGAGCAGTCCTaGTGCCCAGATGCAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GAVLMPRCRELACRRRKLCMEQS*CPDAGS Trigger: ACTCCCTGCATCTGGGCATCAGGACTGCTCCATACA...GAGCTTCCTCCTTCTACAAGCTAACTCCCTGCATCTGGGCATCAGGACTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | ACCCATCAGACCTGTGCAGGTTCCTCTACTATACATGCTCAAGGTTCCTGTTCTAGCCGCAGACTGACTTaGCACGGCCAGCTTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: THQTCAGSSTIHAQGSCSSRRLT*HGQLPS Trigger: GGAGGGAAGCTGGCCGTGGCAAGTCAGTCTGCGGCT...AGAACAGGAACCTTGAGCATGTATAGTAGAGGAACCTGCACAGGTCTGATGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | GGAGCAGTCCTGATGCCCAGATGCAGGGAGTTAGCTTGTAGAAGGAGGAAGCTCATTCTGACCTGTCCTTaGCTTAGCTCTGGAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAVLMPRCRELACRRRKLILTCP*LSSGTV Trigger: CACAGTTCCAGAGCTAAGGCAAGGACAGGTCAGAAT...GAGCTTCCTCCTTCTACAAGCTAACTCCCTGCATCTGGGCATCAGGACTGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | GGAGCAGTCCTGATGCCCAGATGCAGGGAGTTAGCTTGTAGAAGGAGGAAGCTCCAGGGATGCACTTGTTaGACTAGATCCCAGTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GAVLMPRCRELACRRRKLQGCTC*TRSQFV Trigger: AACAAACTGGGATCTAGTGCAACAAGTGCATCCCTG...GAGCTTCCTCCTTCTACAAGCTAACTCCCTGCATCTGGGCATCAGGACTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTGCGTCCACTCCACCTTaGGGTACTCCAGCACACAGC | + |
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Preference number: 4 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTASTPP*GTPAHS Trigger: GCTGTGTGCTGGAGTACCTCAAGGTGGAGTGGACGC...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | GGAGCAGTCCTGATGCCCAGATGCAGGGAGTTAGCTTGTAGAAGGAGGAAGCTCTCTTTGGGTCTCAGTTaGGGAGTGAACTATTTTAGC | + |
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Preference number: 4 (lower is better) Translates to: GAVLMPRCRELACRRRKLSLGLS*GVNYFS Trigger: GCTAAAATAGTTCACTCCTCAACTGAGACCCAAAGA...GAGCTTCCTCCTTCTACAAGCTAACTCCCTGCATCTGGGCATCAGGACTGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | GGAGCAGTCCTGATGCCCAGATGCAGGGAGTTAGCTTGTAGAAGGAGGAAGCTCTTCTGCCTACTCAACTaGTTTGAGATTCCCACTCAA | + |
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Preference number: 4 (lower is better) Translates to: GAVLMPRCRELACRRRKLFCLLN*FEIPTQ Trigger: TTGAGTGGGAATCTCAAAGCAGTTGAGTAGGCAGAA...GAGCTTCCTCCTTCTACAAGCTAACTCCCTGCATCTGGGCATCAGGACTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR CCA 90 bp | ACCCATCAGACCTGTGCAGGTTCCTCTACTATACATGCTCAAGGTTCCTGTTCTTCGAGTATACACTCCTaGCTTATCCGGCAGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: THQTCAGSSTIHAQGSCSSSIHS*LIRQAT Trigger: TGTGGCCTGCCGGATAAGCCAGGAGTGTATACTCGA...AGAACAGGAACCTTGAGCATGTATAGTAGAGGAACCTGCACAGGTCTGATGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR CCA 90 bp | GGAGCAGTCCTGATGCCCAGATGCAGGGAGTTAGCTTGTAGAAGGAGGAAGCTCCATTATATTCTTTGGTaGGGGAGGCATGTGTATGAG | + |
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Preference number: 4 (lower is better) Translates to: GAVLMPRCRELACRRRKLHYILW*GRHVYE Trigger: CTCATACACATGCCTCCCCCACCAAAGAATATAATG...GAGCTTCCTCCTTCTACAAGCTAACTCCCTGCATCTGGGCATCAGGACTGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR CCA 90 bp | ACCCATCAGACCTGTGCAGGTTCCTCTACTATACATGCTCAAGGTTCCTGTTCTAGCAGTAGAGCCAGGTaGAATATTCTGGGTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: THQTCAGSSTIHAQGSCSSSRAR*NILGSS Trigger: GCTGCTACCCAGAATATTCCACCTGGCTCTACTGCT...AGAACAGGAACCTTGAGCATGTATAGTAGAGGAACCTGCACAGGTCTGATGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCCCACCAGAGTCACCCTaGCATGCGTCCACTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: LKCKALEFKTGTPAYRLCPPESP*HASTPP Trigger: AGGTGGAGTGGACGCATGTCAGGGTGACTCTGGTGG...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | GGAGCAGTCCTGATGCCCAGATGCAGGGAGTTAGCTTGTAGAAGGAGGAAGCTCAGTCGAAGTTACACGTaGTGGCCTATACATTTTAAT | + |
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Preference number: 4 (lower is better) Translates to: GAVLMPRCRELACRRRKLSRSYT*WPIHFN Trigger: ATTAAAATGTATAGGCCAGCACGTGTAACTTCGACT...GAGCTTCCTCCTTCTACAAGCTAACTCCCTGCATCTGGGCATCAGGACTGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTAGAGTCACCCTGACATaGGTCCACTCCACCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTRVTLT*VHSTLR Trigger: CCTCAAGGTGGAGTGGACGCATGTCAGGGTGACTCT...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTTGGCCAGCATATTCTTaGGCGCCCCATCCTGTTACA | + |
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Preference number: 4 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTWPAYS*APHPVT Trigger: TGTAACAGGATGGGGCGCTCAAGAATATGCTGGCCA...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR CCA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCAGGCTGCCTCCACAGTaGTGGGCATTATTGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LKCKALEFKTGTPAYRLCRLPPQ*WALLSR Trigger: GCGGCTCAATAATGCCCACCACTGTGGAGGCAGCCT...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR CCA 90 bp | GCGTTTGACGACCCTTTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTCCAGGTGGAATATTCTaGGTAGCAGCTGGGAGACAC | + |
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Preference number: 4 (lower is better) Translates to: AFDDPFTLKNITASDRKSPGGIF*VAAGRH Trigger: GTGTCTCCCAGCTGCTACCCAGAATATTCCACCTGG...AGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAAAGGGTCGTCAAACGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR CCA 90 bp | ACCCATCAGACCTGTGCAGGTTCCTCTACTATACATGCTCAAGGTTCCTGTTCTTTTTCAGCAAATGTATaGAGCAGTCCTGATGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: THQTCAGSSTIHAQGSCSFSANV*SSPDAQ Trigger: CTGGGCATCAGGACTGCTCCATACATTTGCTGAAAA...AGAACAGGAACCTTGAGCATGTATAGTAGAGGAACCTGCACAGGTCTGATGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | ACCCATCAGACCTGTGCAGGTTCCTCTACTATACATGCTCAAGGTTCCTGTTCTCCTACTCAACTGCTTTaGGATTCCCACTCAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: THQTCAGSSTIHAQGSCSPTQLL*DSHSNE Trigger: TTCATTTGAGTGGGAATCTCAAAGCAGTTGAGTAGG...AGAACAGGAACCTTGAGCATGTATAGTAGAGGAACCTGCACAGGTCTGATGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR CCA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCCTGCCTCCACAGTGGTaGGCATTATTGAGCCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LKCKALEFKTGTPAYRLCLPPQW*ALLSRR Trigger: TCTGCGGCTCAATAATGCCCACCACTGTGGAGGCAG...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR CCA 90 bp | ACCCATCAGACCTGTGCAGGTTCCTCTACTATACATGCTCAAGGTTCCTGTTCTGGGAGACACACACTATaGATATCTTTGGTAAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: THQTCAGSSTIHAQGSCSGRHTL*ISLVKV Trigger: CACCTTTACCAAAGATATCCATAGTGTGTGTCTCCC...AGAACAGGAACCTTGAGCATGTATAGTAGAGGAACCTGCACAGGTCTGATGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCCAAGTAGAGCTATGGTaGCTGCCAGGATCACTACCC | + |
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Preference number: 4 (lower is better) Translates to: LKCKALEFKTGTPAYRLCQVELW*LPGSLP Trigger: GGGTAGTGATCCTGGCAGTCACCATAGCTCTACTTG...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | TTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTAGTGGGACGTTCTGGATCCACATGTTATTaGTCAGGCTGCCTCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: FTLKNITASDRKSVVGRSGSTCY*SGCLHS Trigger: ACTGTGGAGGCAGCCTGATCAATAACATGTGGATCC...AGAACGTCCCACTACAGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTCAGGATCACTACCCCTaGGACGACAATGAAACATAC | + |
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Preference number: 4 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTQDHYP*DDNETY Trigger: GTATGTTTCATTGTCGTCGCAGGGGTAGTGATCCTG...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | TTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTAGTGGGACGTTCTGTCCTGATGCCCAGATaGAGGGAGTTAGCTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: FTLKNITASDRKSVVGRSVLMPR*RELACR Trigger: TCTACAAGCTAACTCCCTGCATCTGGGCATCAGGAC...AGAACGTCCCACTACAGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR CCA 90 bp | ACCCATCAGACCTGTGCAGGTTCCTCTACTATACATGCTCAAGGTTCCTGTTCTCGAAGTTACACGTGCTaGCCTATACATTTTAATCCT | + |
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Preference number: 4 (lower is better) Translates to: THQTCAGSSTIHAQGSCSRSYTC*PIHFNP Trigger: AGGATTAAAATGTATAGGCCAGCACGTGTAACTTCG...AGAACAGGAACCTTGAGCATGTATAGTAGAGGAACCTGCACAGGTCTGATGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR CCA 90 bp | GCGTTTGACGACCCTTTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTATTCTGGGTAGCAGCTaGGAGACACACACTATGGAT | + |
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Preference number: 4 (lower is better) Translates to: AFDDPFTLKNITASDRKSILGSS*ETHTMD Trigger: ATCCATAGTGTGTGTCTCCCAGCTGCTACCCAGAAT...AGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAAAGGGTCGTCAAACGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | GCGTTTGACGACCCTTTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTCCCCTGCGACGACAATaGAACATACTACATATGGAT | + |
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Preference number: 4 (lower is better) Translates to: AFDDPFTLKNITASDRKSPLRRQ*NILHMD Trigger: ATCCATATGTAGTATGTTTCATTGTCGTCGCAGGGG...AGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAAAGGGTCGTCAAACGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | TTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTAGTGGGACGTTCTTCTGAAGCAGTGAGCTaGTGTCAGGATCCACATGTT | + |
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Preference number: 4 (lower is better) Translates to: FTLKNITASDRKSVVGRSSEAVS*CQDPHV Trigger: AACATGTGGATCCTGACAGCAGCTCACTGCTTCAGA...AGAACGTCCCACTACAGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR CCA 90 bp | TTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTAGTGGGACGTTCTTGGAAATACCAGACGTaGCAATCCAGTCACGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FTLKNITASDRKSVVGRSWKYQT*QSSHED Trigger: ATCCTCGTGACTGGATTGCCACGTCTGGTATTTCCA...AGAACGTCCCACTACAGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTTGGATTCAGAAATCTTaGAGTCGAAGTTACACGTGC | + |
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Preference number: 4 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTWIQKS*SRSYTC Trigger: GCACGTGTAACTTCGACTTCAAGATTTCTGAATCCA...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | GCGTTTGACGACCCTTTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTCTCAGTTGAGGAGTaGACTATTTTAGCTTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: AFDDPFTLKNITASDRKSVSVEE*TILAFA Trigger: GGCAAAAGCTAAAATAGTTCACTCCTCAACTGAGAC...AGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAAAGGGTCGTCAAACGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCAGAAGGAGGAAGCTCTaGCGCATAGATGATCATGCA | + |
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Preference number: 4 (lower is better) Translates to: LKCKALEFKTGTPAYRLCRRRKL*RIDDHA Trigger: TGCATGATCATCTATGCGTCAGAGCTTCCTCCTTCT...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCGACCCATCAGACCTGTaGAGGTTCCTCTACTATACA | + |
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Preference number: 4 (lower is better) Translates to: LKCKALEFKTGTPAYRLCDPSDL*RFLYYT Trigger: TGTATAGTAGAGGAACCTGCACAGGTCTGATGGGTC...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCGCTCTGACGCATAGATaGTCATGCATAGGCAAACTT | + |
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Preference number: 4 (lower is better) Translates to: LKCKALEFKTGTPAYRLCALTHR*SCIGKL Trigger: AAGTTTGCCTATGCATGATCATCTATGCGTCAGAGC...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTATTAATAAGCCAATTTaGTGCAGCCTGGTCAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTINKPI*CSLVSK Trigger: CTTACTGACCAGGCTGCAGCAAATTGGCTTATTAAT...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCCCTGCATACAGACTTTaGAACAGGGATGCACTTGTT | + |
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Preference number: 4 (lower is better) Translates to: LKCKALEFKTGTPAYRLCPAYRL*NRDALV Trigger: AACAAGTGCATCCCTGTTGCAAAGTCTGTATGCAGG...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR TCA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCCTTAGATTTAGCGTTTaGCGACCCTTTTACGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LKCKALEFKTGTPAYRLCLRFSV*RPFYAQ Trigger: TTGAGCGTAAAAGGGTCGTCAAACGCTAAATCTAAG...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283916.11 |
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| CDS-3UTR GCA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTACAGCCACAGTACTATaGAACATTCATATAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTTATVL*NIHIVL Trigger: GAGAACTATATGAATGTTGCATAGTACTGTGGCTGT...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR CCA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCCAATTTGCTGCAGCCTaGTCAGTAAGTGATGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LKCKALEFKTGTPAYRLCQFAAA*SVSDVI Trigger: GATAACATCACTTACTGACCAGGCTGCAGCAAATTG...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR CCA 90 bp | TTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTAGTGGGACGTTCTGCATTCCAGACAAGATaGCTCCATTATAACTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: FTLKNITASDRKSVVGRSAFQTR*LHYNYV Trigger: CACATAGTTATAATGGAGCCATCTTGTCTGGAATGC...AGAACGTCCCACTACAGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR CCA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTTTACATTATATTCTTTaGTGGGGGAGGCATGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTLHYIL*WGRHVY Trigger: ATACACATGCCTCCCCCACCAAAGAATATAATGTAA...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR GCA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTAAACAGACTCAATTCTaGTTTTCATTGATGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTKQTQF*FSLMLH Trigger: ATGGAGCATCAATGAAAAGCAGAATTGAGTCTGTTT...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR GCA 90 bp | TTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTAGTGGGACGTTCTCTCAAGTCTCACAAGTaGAATGTCATTTTCATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTLKNITASDRKSVVGRSLKSHK*NVIFMS Trigger: ACTCATGAAAATGACATTGCACTTGTGAGACTTGAG...AGAACGTCCCACTACAGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR GCA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCTTCCTCTACTATACATaGTCAAGGTTCCTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKCKALEFKTGTPAYRLCFLYYT*SRFLFF Trigger: GAAGAACAGGAACCTTGAGCATGTATAGTAGAGGAA...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS CCA 90 bp | GCTGTCAGGATCCACATGTTATTGATCAGGCTGCCTCCACAGTGGTaGGCATTATTGAGCCGCAGACTGACTTGCCACGGCCAGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AVRIHMLLIRLPPQW*ALLSRRLTCHGQLP Trigger: GGGAAGCTGGCCGTGGCAAGTCAGTCTGCGGCTCAATAATGCCCACCACTGTGGAGGCAGCCTGATCAATAACATGTGGATCCTGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283916.11 ENST00000502573.5 ENST00000505533.1 |
||
| CDS-3UTR CAA 90 bp | GGAGCAGTCCTGATGCCCAGATGCAGGGAGTTAGCTTGTAGAAGGAGGAAGCTCAGGATCCACATGTTATaGATCAGGCTGCCTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GAVLMPRCRELACRRRKLRIHML*IRLPPQ Trigger: CTGTGGAGGCAGCCTGATCAATAACATGTGGATCCT...GAGCTTCCTCCTTCTACAAGCTAACTCCCTGCATCTGGGCATCAGGACTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR CAA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTGAGCCGCAGACTGACTaGCCACGGCCAGCTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTEPQTD*PRPASL Trigger: GAGGGAAGCTGGCCGTGGCAAGTCAGTCTGCGGCTC...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR CAA 90 bp | GGAGCAGTCCTGATGCCCAGATGCAGGGAGTTAGCTTGTAGAAGGAGGAAGCTCACCTGCATACAGACTTaGCAACAGGGATGCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GAVLMPRCRELACRRRKLTCIQT*QQGCTC Trigger: ACAAGTGCATCCCTGTTGCAAAGTCTGTATGCAGGT...GAGCTTCCTCCTTCTACAAGCTAACTCCCTGCATCTGGGCATCAGGACTGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR CAA 90 bp | ACCCATCAGACCTGTGCAGGTTCCTCTACTATACATGCTCAAGGTTCCTGTTCTCAGTGGTGGGCATTATaGAGCCGCAGACTGACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: THQTCAGSSTIHAQGSCSQWWAL*SRRLTC Trigger: GCAAGTCAGTCTGCGGCTCAATAATGCCCACCACTG...AGAACAGGAACCTTGAGCATGTATAGTAGAGGAACCTGCACAGGTCTGATGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS CCA 90 bp | ATATTCTTGAGCGCCCCATCCTGTTACATAAGCAGTAGAGCCAGGTaGAATATTCTGGGTAGCAGCTGGGAGACACACACTATGGATATC | + |
|
Preference number: 5 (lower is better) Translates to: IFLSAPSCYISSRAR*NILGSSWETHTMDI Trigger: GATATCCATAGTGTGTGTCTCCCAGCTGCTACCCAGAATATTCCACCTGGCTCTACTGCTTATGTAACAGGATGGGGCGCTCAAGAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS-3UTR CAA 90 bp | TTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTAGTGGGACGTTCTTGCGTCCACTCCACCTaGAGGTACTCCAGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: FTLKNITASDRKSVVGRSCVHST*RYSSTQ Trigger: CTGTGTGCTGGAGTACCTCAAGGTGGAGTGGACGCA...AGAACGTCCCACTACAGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR CAA 90 bp | ACCCATCAGACCTGTGCAGGTTCCTCTACTATACATGCTCAAGGTTCCTGTTCTGCACTAGATCCCAGTTaGTTGCCTAATCCAGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: THQTCAGSSTIHAQGSCSALDPS*LPNPVK Trigger: CTTGACTGGATTAGGCAACAAACTGGGATCTAGTGC...AGAACAGGAACCTTGAGCATGTATAGTAGAGGAACCTGCACAGGTCTGATGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS CCA 90 bp | GAGCCAGGTGGAATATTCTGGGTAGCAGCTGGGAGACACACACTATaGATATCTTTGGTAAAGGTGACACTGTTCTCAAGTCTCACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: EPGGIFWVAAGRHTL*ISLVKVTLFSSLTS Trigger: ACTTGTGAGACTTGAGAACAGTGTCACCTTTACCAAAGATATCCATAGTGTGTGTCTCCCAGCTGCTACCCAGAATATTCCACCTGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS-3UTR CAA 90 bp | GCGTTTGACGACCCTTTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTCACACCACTACCATCTaGCCTCAGTTTGGCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: AFDDPFTLKNITASDRKSHTTTI*PQFGNM Trigger: CATGTTGCCAAACTGAGGCAAGATGGTAGTGGTGTG...AGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAAAGGGTCGTCAAACGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR CAA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCGTGGCCAGCATATTCTaGAGCGCCCCATCCTGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LKCKALEFKTGTPAYRLCVASIF*SAPSCY Trigger: GTAACAGGATGGGGCGCTCAAGAATATGCTGGCCAC...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS GCA 90 bp | TGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTaGAACAGGGATGCACTTGTTGCACTAGATCCCAGTTTGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CKALEFKTGTPAYRL*NRDALVALDPSLLP Trigger: AGGCAACAAACTGGGATCTAGTGCAACAAGTGCATCCCTGTTGCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS CCA 90 bp | TGTTACATAAGCAGTAGAGCCAGGTGGAATATTCTGGGTAGCAGCTaGGAGACACACACTATGGATATCTTTGGTAAAGGTGACACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CYISSRARWNILGSS*ETHTMDIFGKGDTV Trigger: AACAGTGTCACCTTTACCAAAGATATCCATAGTGTGTGTCTCCCAGCTGCTACCCAGAATATTCCACCTGGCTCTACTGCTTATGTAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS CCA 90 bp | CCACTCCACCTTGAGGTACTCCAGCACACAGCATTCCAGACAAGATaGCTCCATTATAACTATGTGGTGCATTACATACATCATTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: PLHLEVLQHTAFQTR*LHYNYVVHYIHHYL Trigger: TAAGTAATGATGTATGTAATGCACCACATAGTTATAATGGAGCCATCTTGTCTGGAATGCTGTGTGCTGGAGTACCTCAAGGTGGAGTGG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS-3UTR CAA 90 bp | GCGTTTGACGACCCTTTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGCATGTTTCCACAGTTaGCTTACTTCTCATCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AFDDPFTLKNITASDRKSACFHS*LTSHPQ Trigger: CTGAGGATGAGAAGTAAGCAAACTGTGGAAACATGC...AGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAAAGGGTCGTCAAACGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS TCA 90 bp | CCCTGCGACGACAATGAAACATACTACATATGGATTCAGAAATCTTaGAGTCGAAGTTACACGTGCCTTTGTTTGCTTGGAGGTCATATT | + |
|
Preference number: 5 (lower is better) Translates to: PCDDNETYYIWIQKS*SRSYTCLCLLGGHI Trigger: AATATGACCTCCAAGCAAACAAAGGCACGTGTAACTTCGACTTCAAGATTTCTGAATCCATATGTAGTATGTTTCATTGTCGTCGCAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511931.1 |
||
| CDS-3UTR CAA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTGTGATGTTATCTCAGTaGAAGGGTTTATTTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTVMLSQ*KGLFPG Trigger: ACCTGGAAATAAACCCTTCAACTGAGATAACATCAC...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR CAA 90 bp | TTGAAATGTAAAGCTTTGGAATTTAAGACAGGCACACCTGCATACAGACTTTGCCTAGATCCCAGTTTGTaGCCTAATCCAGTCAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LKCKALEFKTGTPAYRLCLDPSL*PNPVKV Trigger: TACCTTGACTGGATTAGGCAACAAACTGGGATCTAG...GCAAAGTCTGTATGCAGGTGTGCCTGTCTTAAATTCCAAAGCTTTACATTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR CAA 90 bp | TACTATACATGCTCAAGGTTCCTGTTCTTCTCACTACGGGCATTTAGCACAACTTTTACATTATATTCTTaGGTGGGGGAGGCATGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: YYTCSRFLFFSLRAFSTTFTLYS*VGEACV Trigger: TACACATGCCTCCCCCACCAAAGAATATAATGTAAA...AGTTGTGCTAAATGCCCGTAGTGAGAAGAACAGGAACCTTGAGCATGTATAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS GCA 90 bp | AGCACACAGCATTCCAGACAAGATGGCTCCATTATAACTATGTGGTaGATTACATACATCATTACTTATTATTCTGACCTGTCCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: STQHSRQDGSIITMW*ITYIITYYSDLSLP Trigger: AGGCAAGGACAGGTCAGAATAATAAGTAATGATGTATGTAATGCACCACATAGTTATAATGGAGCCATCTTGTCTGGAATGCTGTGTGCT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS CCA 90 bp | TCCAGCACACAGCATTCCAGACAAGATGGCTCCATTATAACTATGTaGTGCATTACATACATCATTACTTATTATTCTGACCTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSTQHSRQDGSIITM*CITYIITYYSDLSL Trigger: CAAGGACAGGTCAGAATAATAAGTAATGATGTATGTAATGCACCACATAGTTATAATGGAGCCATCTTGTCTGGAATGCTGTGTGCTGGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS-3UTR CAA 90 bp | TTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTAGTGGGACGTTCTATGGATTCAGAAATCTaGAAGTCGAAGTTACACGTG | + |
|
Preference number: 5 (lower is better) Translates to: FTLKNITASDRKSVVGRSMDSEI*KSKLHV Trigger: CACGTGTAACTTCGACTTCAAGATTTCTGAATCCAT...AGAACGTCCCACTACAGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS-3UTR CAA 90 bp | TTTACGCTCAAAAATATAACTGCCAGTGATAGGAAGTCTGTAGTGGGACGTTCTACACTATGGATATCTTaGGTAAAGGTGACACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTLKNITASDRKSVVGRSTLWIS*VKVTLF Trigger: GAACAGTGTCACCTTTACCAAAGATATCCATAGTGT...AGAACGTCCCACTACAGACTTCCTATCACTGGCAGTTATATTTTTGAGCGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283916.11 |
||
| CDS TCA 90 bp | CATTATAACTATGTGGTGCATTACATACATCATTACTTATTATTCTaGCCTGTCCTTGCCTTAGCTCTGGAACTGTGTGGCCAGCATATT | + |
|
Preference number: 5 (lower is better) Translates to: HYNYVVHYIHHYLLF*PVLALALELCGQHI Trigger: AATATGCTGGCCACACAGTTCCAGAGCTAAGGCAAGGACAGGTCAGAATAATAAGTAATGATGTATGTAATGCACCACATAGTTATAATG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS GCA 72 bp | CCACAGTGGTGGGCATTATTGAGCCGCAGACTGACTTaGCACGGCCAGCTTCCCTCCTCAGCCTCAGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PQWWALLSRRLT*HGQLPSSASVP Trigger: AGGCACTGAGGCTGAGGAGGGAAGCTGGCCGTGGCAAGTCAGTCTGCGGCTCAATAATGCCCACCACTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000283916.11 ENST00000502573.5 ENST00000505533.1 ENST00000509584.5 |
||
| CDS CAA 72 bp | TCCACAGTGGTGGGCATTATTGAGCCGCAGACTGACTaGCCACGGCCAGCTTCCCTCCTCAGCCTCAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: STVVGIIEPQTD*PRPASLLSLSA Trigger: GGCACTGAGGCTGAGGAGGGAAGCTGGCCGTGGCAAGTCAGTCTGCGGCTCAATAATGCCCACCACTGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000283916.11 ENST00000502573.5 ENST00000505533.1 ENST00000509584.5 |
||
| CDS CCA 72 bp | ATCCACATGTTATTGATCAGGCTGCCTCCACAGTGGTaGGCATTATTGAGCCGCAGACTGACTTGCCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: IHMLLIRLPPQW*ALLSRRLTCHG Trigger: GCCGTGGCAAGTCAGTCTGCGGCTCAATAATGCCCACCACTGTGGAGGCAGCCTGATCAATAACATGTGGAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283916.11 ENST00000502573.5 ENST00000505533.1 |
||
| CDS CCA 72 bp | AGGATCCACATGTTATTGATCAGGCTGCCTCCACAGTaGTGGGCATTATTGAGCCGCAGACTGACTTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RIHMLLIRLPPQ*WALLSRRLTCH Trigger: GTGGCAAGTCAGTCTGCGGCTCAATAATGCCCACCACTGTGGAGGCAGCCTGATCAATAACATGTGGATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283916.11 ENST00000502573.5 ENST00000505533.1 |
||
| CDS CCA 72 bp | AGCGCCCCATCCTGTTACATAAGCAGTAGAGCCAGGTaGAATATTCTGGGTAGCAGCTGGGAGACACACACT | + |
|
Preference number: 6 (lower is better) Translates to: SAPSCYISSRAR*NILGSSWETHT Trigger: AGTGTGTGTCTCCCAGCTGCTACCCAGAATATTCCACCTGGCTCTACTGCTTATGTAACAGGATGGGGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS CAA 72 bp | TGCAACAGGGATGCACTTGTTGCACTAGATCCCAGTTaGTTGCCTAATCCAGTCAAGGTAGGCTGTCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: CNRDALVALDPS*LPNPVKVGCHS Trigger: CGAGTGACAGCCTACCTTGACTGGATTAGGCAACAAACTGGGATCTAGTGCAACAAGTGCATCCCTGTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS CAA 72 bp | AACAGGGATGCACTTGTTGCACTAGATCCCAGTTTGTaGCCTAATCCAGTCAAGGTAGGCTGTCACTCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: NRDALVALDPSL*PNPVKVGCHSS Trigger: ACTCGAGTGACAGCCTACCTTGACTGGATTAGGCAACAAACTGGGATCTAGTGCAACAAGTGCATCCCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS CAA 90 bp | AGACTTTGCAACAGGGATGCACTTGTTGCACTAGATCCCAGTTTGTaGCCTAATCCAGTCAAGGTAGGCTGTCACTCGAGTATACACTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLCNRDALVALDPSL*PNPVKVGCHSSIHS Trigger: GGAGTGTATACTCGAGTGACAGCCTACCTTGACTGGATTAGGCAACAAACTGGGATCTAGTGCAACAAGTGCATCCCTGTTGCAAAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS CAA 90 bp | TACAGACTTTGCAACAGGGATGCACTTGTTGCACTAGATCCCAGTTaGTTGCCTAATCCAGTCAAGGTAGGCTGTCACTCGAGTATACAC | + |
|
Preference number: 6 (lower is better) Translates to: YRLCNRDALVALDPS*LPNPVKVGCHSSIH Trigger: GTGTATACTCGAGTGACAGCCTACCTTGACTGGATTAGGCAACAAACTGGGATCTAGTGCAACAAGTGCATCCCTGTTGCAAAGTCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS CCA 72 bp | AGCAGTAGAGCCAGGTGGAATATTCTGGGTAGCAGCTaGGAGACACACACTATGGATATCTTTGGTAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSRARWNILGSS*ETHTMDIFGKG Trigger: ACCTTTACCAAAGATATCCATAGTGTGTGTCTCCCAGCTGCTACCCAGAATATTCCACCTGGCTCTACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS CAA 72 bp | CCATCTTGCCTCATAAACCAGTTCCTCCACCTGACATaGGCTGTCTTCTTTTCTCAGTTTGGCAACATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSCLINQFLHLT*AVFFSQFGNMS Trigger: GCTCATGTTGCCAAACTGAGAAAAGAAGACAGCCAATGTCAGGTGGAGGAACTGGTTTATGAGGCAAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508409.5 |
||
| CDS CAA 72 bp | TGGGTAGCAGCTGGGAGACACACACTATGGATATCTTaGGTAAAGGTGACACTGTTCTCAAGTCTCACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: WVAAGRHTLWIS*VKVTLFSSLTS Trigger: ACTTGTGAGACTTGAGAACAGTGTCACCTTTACCAAAGATATCCATAGTGTGTGTCTCCCAGCTGCTACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS CAA 90 bp | GGAATATTCTGGGTAGCAGCTGGGAGACACACACTATGGATATCTTaGGTAAAGGTGACACTGTTCTCAAGTCTCACAAGTGCAATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GIFWVAAGRHTLWIS*VKVTLFSSLTSAMS Trigger: TGACATTGCACTTGTGAGACTTGAGAACAGTGTCACCTTTACCAAAGATATCCATAGTGTGTGTCTCCCAGCTGCTACCCAGAATATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
||
| CDS CCA 72 bp | GCCCCACATTCATTAATAAGCCAATTTGCTGCAGCCTaGTCAGTAAGTGATGTTATCTCAGTTGAAGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: APHSLISQFAAA*SVSDVISVEGF Trigger: AAACCCTTCAACTGAGATAACATCACTTACTGACCAGGCTGCAGCAAATTGGCTTATTAATGAATGTGGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000509584.5 |
||
| CDS CCA 72 bp | ACTGTGTGGCCATTAATAAGCCAATTTGCTGCAGCCTaGTCAGTAAGTGATGTTATCTCAGTTGAAGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TVWPLISQFAAA*SVSDVISVEGF Trigger: AAACCCTTCAACTGAGATAACATCACTTACTGACCAGGCTGCAGCAAATTGGCTTATTAATGGCCACACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514868.1 |
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| CDS CAA 72 bp | TTAGGTCTGGACCGGCCCCACATTATGTTATCTCAGTaGAAGGGTTTATTTCCAGGTTTCCAGAGTTATTCA | + |
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Preference number: 6 (lower is better) Translates to: LGLDRPHIMLSQ*KGLFPGFQSYS Trigger: TGAATAACTCTGGAAACCTGGAAATAAACCCTTCAACTGAGATAACATAATGTGGGGCCGGTCCAGACCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502573.5 |
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| CDS CCA 72 bp | CAAGGATTCTCATTAATAAGCCAATTTGCTGCAGCCTaGTCAGTAAGTGATGTTATCTCAGTTGAAGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: QGFSLISQFAAA*SVSDVISVEGF Trigger: AAACCCTTCAACTGAGATAACATCACTTACTGACCAGGCTGCAGCAAATTGGCTTATTAATGAGAATCCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508409.5 |
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| CDS CAA 72 bp | GATTCAGAAATCTTGAAGTCGAAGTTACACGTGCCTTaGTTTGCTTGGAGGTCATATTGTCATTTATCTGAG | + |
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Preference number: 6 (lower is better) Translates to: DSEILKSKLHVP*FAWRSYCHLSE Trigger: CTCAGATAAATGACAATATGACCTCCAAGCAAACAAAGGCACGTGTAACTTCGACTTCAAGATTTCTGAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511931.1 |
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| CDS CCA 72 bp | CAGCATTCCAGACAAGATGGCTCCATTATAACTATGTaGTGCATTACATACATCATTACTTATTATTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: QHSRQDGSIITM*CITYIITYYSD Trigger: GTCAGAATAATAAGTAATGATGTATGTAATGCACCACATAGTTATAATGGAGCCATCTTGTCTGGAATGCTG 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283916.11 ENST00000505533.1 |
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