Pregenerated sensors for TMPRSS11B (Homo sapiens)
Ensembl gene IDs: ENSG00000185873Ensembl transcript IDs: ENST00000332644.6, ENST00000502365.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTTGAACACGGATTTAGCCATGTTTCCCAGGCTGCCCTCAAACTCCTGGGCTCAAAGGATAGCCTACAGTaGTCTTTATGTTCCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: FEHGFSHVSQAALKLLGSKDSLQ*SLCSFV Trigger: TACAAAGGAACATAAAGACCACTGTAGGCTATCCTT...TGAGCCCAGGAGTTTGAGGGCAGCCTGGGAAACATGGCTAAATCCGTGTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| 3UTR-3UTR CCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTATGAGCCACTACACCTaGCCTCTTCCTATCTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: QMMESDFNQIISLLWSSVMSHYT*PLPISY Trigger: GTAAGAGATAGGAAGAGGCCAGGTGTAGTGGCTCAT...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| 3UTR GCA 72 bp | ATTTGTAGAGATTACAAAGTTAGCCATCCATATGATTaGACTTTTACTATAAGGAGATGCCACACAGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: ICRDYKVSHPYD*TFTIRRCHTVL Trigger: GAGAACTGTGTGGCATCTCCTTATAGTAAAAGTGCAATCATATGGATGGCTAACTTTGTAATCTCTACAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR TCA 90 bp | TTTGAACACGGATTTAGCCATGTTTCCCAGGCTGCCCTCAAACTCCTGGGCTCAATAGCCACCTGCTGCTaGTCAGAGAGGCTCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: FEHGFSHVSQAALKLLGSIATCC*SERLHS Trigger: ACTGTGGAGCCTCTCTGATCAGCAGCAGGTGGCTAT...TGAGCCCAGGAGTTTGAGGGCAGCCTGGGAAACATGGCTAAATCCGTGTTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATGGCCTGCCATGGCCATaGCCCCTCCAGGGAGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYGLPWP*PLQGAF Trigger: AAAAGCTCCCTGGAGGGGGCATGGCCATGGCAGGCC...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATCATTGCATGCTGGCCTaGCATGGCCATGCCCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYHCMLA*HGHAPS Trigger: GGAGGGGGCATGGCCATGGCAGGCCAGCATGCAATG...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | TTTGAACACGGATTTAGCCATGTTTCCCAGGCTGCCCTCAAACTCCTGGGCTCAGGTTACTCCCAAGATTaGCGCCACTCCAAGAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: FEHGFSHVSQAALKLLGSGYSQD*RHSKKN Trigger: ATTTTTCTTGGAGTGGCGGCAATCTTGGGAGTAACC...TGAGCCCAGGAGTTTGAGGGCAGCCTGGGAAACATGGCTAAATCCGTGTTCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR TCA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTACCCACCTCAGCCTCCTaGATAGCTGGGACTATAGGT | + |
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Preference number: 4 (lower is better) Translates to: DPKATDKDSLQWSLCSFVPTSAS*IAGTIG Trigger: ACCTATAGTCCCAGCTATTCAGGAGGCTGAGGTGGG...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATCCATGTTTCCCAGGCTaGCCTCAAACTCCTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYPCFPG*PQTPGL Trigger: GAGCCCAGGAGTTTGAGGGCAGCCTGGGAAACATGG...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | TTTGAACACGGATTTAGCCATGTTTCCCAGGCTGCCCTCAAACTCCTGGGCTCAAGGTGCACGCCACCATaGCTAGCTAATTTTTGTATT | + |
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Preference number: 4 (lower is better) Translates to: FEHGFSHVSQAALKLLGSRCTPP*LANFCI Trigger: AATACAAAAATTAGCTAGGCATGGTGGCGTGCACCT...TGAGCCCAGGAGTTTGAGGGCAGCCTGGGAAACATGGCTAAATCCGTGTTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CCA 90 bp | TTTGAACACGGATTTAGCCATGTTTCCCAGGCTGCCCTCAAACTCCTGGGCTCAGATGCCAGATATTTCTaGAATCAGGGTAAGCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: FEHGFSHVSQAALKLLGSDARYF*NQGKLV Trigger: CACTAGCTTACCCTGATTCCAGAAATATCTGGCATC...TGAGCCCAGGAGTTTGAGGGCAGCCTGGGAAACATGGCTAAATCCGTGTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTGGCCTTTCCATTGCATaGTGGCCTGCCATGGCCATG | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVGLSIA*WPAMAM Trigger: CATGGCCATGGCAGGCCAGCATGCAATGGAAAGGCC...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTTTGCCCAGGCTGGAGTaGAGTGGTGGCGCAATCACA | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVLPRLE*SGGAIT Trigger: TGTGATTGCGCCACCACTGCACTCCAGCCTGGGCAA...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | TTTGAACACGGATTTAGCCATGTTTCCCAGGCTGCCCTCAAACTCCTGGGCTCAAATTTCAGCTGTAACTaGACATTTGAACCATTGGCA | + |
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Preference number: 4 (lower is better) Translates to: FEHGFSHVSQAALKLLGSNFSCN*TFEPLA Trigger: TGCCAATGGTTCAAATGTGCAGTTACAGCTGAAATT...TGAGCCCAGGAGTTTGAGGGCAGCCTGGGAAACATGGCTAAATCCGTGTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CCA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTAAGTGGCCAAGATCTTTaGGAAGATATGCCGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: DPKATDKDSLQWSLCSFVSGQDL*EDMPCL Trigger: CAGGCACGGCATATCTTCCCAAAGATCTTGGCCACT...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | TTTGAACACGGATTTAGCCATGTTTCCCAGGCTGCCCTCAAACTCCTGGGCTCAAGCCATCCATATGATTaGACTTTTACTATAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FEHGFSHVSQAALKLLGSSHPYD*TFTIRR Trigger: TCTCCTTATAGTAAAAGTGCAATCATATGGATGGCT...TGAGCCCAGGAGTTTGAGGGCAGCCTGGGAAACATGGCTAAATCCGTGTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CCA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTAATGAGCCACTACACCTaGCCTCTTCCTATCTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: DPKATDKDSLQWSLCSFVMSHYT*PLPISY Trigger: GTAAGAGATAGGAAGAGGCCAGGTGTAGTGGCTCAT...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTAGCCTCCTGAATAGCTaGGACTATAGGTGCACGCCA | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVSLLNS*DYRCTP Trigger: TGGCGTGCACCTATAGTCCCAGCTATTCAGGAGGCT...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR TCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTCCACCAGAATCATTCTaGCATGCATCAGCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVPPESF*HASASP Trigger: AGGAGAAGCTGATGCATGTCAGAATGATTCTGGTGG...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATCTTTGCTTAGATTTGTaGTGGCTTGTGAAGCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYLCLDL*WLVKLR Trigger: ACGCAGCTTCACAAGCCAGCACAAATCTAAGCAAAG...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATAATGGAAGCAGGAACTaGATTCCAGGATGCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYNGSRN*IPGCHV Trigger: AACATGGCATCCTGGAATGCAGTTCCTGCTTCCATT...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATTTACTATAAGGAGATaGCACACAGTTCTCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: DPKATDKDSLQWSLCSFVFTIRR*HTVLCP Trigger: AGGGCAGAGAACTGTGTGGCATCTCCTTATAGTAAA...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CCA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATGCTTAGATTTGTGCTaGCTTGTGAAGCTGCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: DPKATDKDSLQWSLCSFVCLDLC*LVKLRF Trigger: AAAACGCAGCTTCACAAGCCAGCACAAATCTAAGCA...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR TCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTTTCTTAGCAAAGCAGTaGGCTGCAGATAATAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVFLAKQ*AADNSH Trigger: GTGGCTATTATCTGCAGCTCACTGCTTTGCTAAGAA...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR TCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTATTTGTGCTGGCTTGTaGAGCTGCGTTTTCACAATT | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVICAGL*SCVFTI Trigger: AATTGTGAAAACGCAGCTTCACAAGCCAGCACAAAT...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR TCA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATTTTTGTTGCCAGTTATaGTACTGTTGGCTACTTGTC | + |
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Preference number: 4 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYFCCQL*YCWLLV Trigger: GACAAGTAGCCAACAGTATCATAACTGGCAACAAAA...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR TCA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATCACTGCAAGATTGCATaGTTTTGTGAGGTACATGAA | + |
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Preference number: 4 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYHCKIA*FCEVHE Trigger: TTCATGTACCTCACAAAATCATGCAATCTTGCAGTG...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTAGTAAGTCTTCTCAACTaGCAGAAAATGAACAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: DPKATDKDSLQWSLCSFVVSLLN*QKMNKK Trigger: CTTCTTGTTCATTTTCTGGCAGTTGAGAAGACTTAC...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR TCA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATCTGTACATAATGTTCTaGTTGTTATGGCAGTATCAG | + |
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Preference number: 4 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYLYIMF*LLWQYQ Trigger: CTGATACTGCCATAACAATCAGAACATTATGTACAG...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR TCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTGCCAGAGTATGCATATaGGGCATTGCAAATTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVARVCI*GIANFV Trigger: AACAAAATTTGCAATGCCTCATATGCATACTCTGGC...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR TCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTTCAACTTATCACAGATaGTGGAGAGTGACTTTAACC | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVSTYHR*WRVTLT Trigger: GGTTAAAGTCACTCTCCATCATCTGTGATAAGTTGA...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTCATGCTAACTCCTTCTaGTGGAGGAAACTTGAATTT | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVHANSF*WRKLEF Trigger: AAATTCAAGTTTCCTCCAGCAGAAGGAGTTAGCATG...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTACATGAAGCCCAGGACTaGTATAATTTTCATGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: DPKATDKDSLQWSLCSFVHEAQD*YNFHEK Trigger: TTTTTCATGAAAATTATAGCAGTCCTGGGCTTCATG...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTCTGAGAGCTTCATTTTaGCTTCAGGAAGACAAATCT | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVLRASF*LQEDKS Trigger: AGATTTGTCTTCCTGAAGCCAAAATGAAGCTCTCAG...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CCA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATTCGAGTATAGACACCTaGCTTATTCTTTTTACCACA | + |
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Preference number: 4 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYSSIDT*LILFTT Trigger: TGTGGTAAAAAGAATAAGCCAGGTGTCTATACTCGA...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CCA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATAAGGATAGCCTACAGTaGTCTTTATGTTCCTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYKDSLQ*SLCSFV Trigger: TACAAAGGAACATAAAGACCACTGTAGGCTATCCTT...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR TCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTAACATTGTCATTTTCTaGGAGCTTCATTTTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVNIVIF*ELHFGF Trigger: GAAGCCAAAATGAAGCTCTCAGAAAATGACAATGTT...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR GCA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTAACTGCATTCCAGGATaGCATGTTGTTTTTCAACAT | + |
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Preference number: 4 (lower is better) Translates to: QMMESDFNQIISLLWSSVNCIPG*HVVFQH Trigger: ATGTTGAAAAACAACATGGCATCCTGGAATGCAGTT...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | TTTGAACACGGATTTAGCCATGTTTCCCAGGCTGCCCTCAAACTCCTGGGCTCAGATACTGTTGGCTACTaGTCTCCCACAACAGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: FEHGFSHVSQAALKLLGSDTVGY*SPTTVV Trigger: AACAACTGTTGTGGGAGACAAGTAGCCAACAGTATC...TGAGCCCAGGAGTTTGAGGGCAGCCTGGGAAACATGGCTAAATCCGTGTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTGTGACGGCCTTTCCATaGCATGCTGGCCTGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: QMMESDFNQIISLLWSSVVTAFP*HAGLPW Trigger: CCATGGCAGGCCAGCATGCAATGGAAAGGCCGTCAC...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTACTCCCACAACAGTTGTaGGTAAGCATTTCAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: DPKATDKDSLQWSLCSFVLPQQL*VSISEA Trigger: TGCTTCTGAAATGCTTACCAACAACTGTTGTGGGAG...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTACCAGTTATGATACTGTaGGCTACTTGTCTCCCACAA | + |
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Preference number: 5 (lower is better) Translates to: DPKATDKDSLQWSLCSFVPVMIL*ATCLPQ Trigger: TTGTGGGAGACAAGTAGCCAACAGTATCATAACTGG...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS GCA 90 bp | ATGCTAACTCCTTCTGCTGGAGGAAACTTGAATTTCAGCTGTAACTaGACATTTGAACCATTGGCATTAGGCAGAAGTTTGATGACCTCA | + |
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Preference number: 5 (lower is better) Translates to: MLTPSAGGNLNFSCN*TFEPLALGRSLMTS Trigger: TGAGGTCATCAAACTTCTGCCTAATGCCAATGGTTCAAATGTGCAGTTACAGCTGAAATTCAAGTTTCCTCCAGCAGAAGGAGTTAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332644.6 ENST00000502365.1 |
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| CDS-3UTR CAA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTTGGTTACTCCCAAGATaGCCGCCACTCCAAGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: QMMESDFNQIISLLWSSVWLLPR*PPLQEK Trigger: TTTTTCTTGGAGTGGCGGCAATCTTGGGAGTAACCA...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTAGCATTAGGCAGAAGTTaGATGACCTCAGATTTGACA | + |
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Preference number: 5 (lower is better) Translates to: DPKATDKDSLQWSLCSFVALGRS*MTSDLT Trigger: TGTCAAATCTGAGGTCATCAAACTTCTGCCTAATGC...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTAATCCAGCACATAACATaGTATCAGTCACAAAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: DPKATDKDSLQWSLCSFVIQHIT*YQSQSQ Trigger: CTGGCTTTGTGACTGATACAATGTTATGTGCTGGAT...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATTATCTTTGCTTAGATTaGTGCTGGCTTGTGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYYLCLD*CWLVKL Trigger: CAGCTTCACAAGCCAGCACAAATCTAAGCAAAGATA...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATTGCACATTTGAACCATaGGCATTAGGCAGAAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYCTFEP*ALGRSL Trigger: CAAACTTCTGCCTAATGCCAATGGTTCAAATGTGCA...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTAATTTCAGAAGCAGCCTaGCTGATTTCCATGAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: DPKATDKDSLQWSLCSFVISEAA*LISMSL Trigger: TAAACTCATGGAAATCAGCAAGGCTGCTTCTGAAAT...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS TCA 90 bp | GAAGCAGGAACTGCATTCCAGGATGCCATGTTGTTTTTCAACATCTaGTGTAATTTAGCCTTGATTTTAGTCCTCATGCTAACTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: EAGTAFQDAMLFFNI*CNLALILVLMLTPS Trigger: AGAAGGAGTTAGCATGAGGACTAAAATCAAGGCTAAATTACATCAGATGTTGAAAAACAACATGGCATCCTGGAATGCAGTTCCTGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332644.6 ENST00000502365.1 |
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| CDS-3UTR CAA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTTGTCTCCCACAACAGTaGTTGGTAAGCATTTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: QMMESDFNQIISLLWSSVCLPQQ*LVSISE Trigger: TTCTGAAATGCTTACCAACAACTGTTGTGGGAGACA...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | GATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTACCATTCACAATTTTGTaGCCAGTTATGATACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: DPKATDKDSLQWSLCSFVPFTIL*PVMILL Trigger: CAACAGTATCATAACTGGCAACAAAATTGTGAATGG...TACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATCCTGTAACTACAACATaGTCATTTTCTGAGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYPVTTT*SFSESF Trigger: GAAGCTCTCAGAAAATGACAATGTTGTAGTTACAGG...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | CAGATGATGGAGAGTGACTTTAACCAAATCATTTCTCTTCTCTGGTCTTCAGTTTTTCAGAGTCCAGTCTaGGATGTAATCCAATTGCGA | + |
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Preference number: 5 (lower is better) Translates to: QMMESDFNQIISLLWSSVFQSPV*DVIQLR Trigger: TCGCAATTGGATTACATCCAAGACTGGACTCTGAAA...AACTGAAGACCAGAGAAGAGAAATGATTTGGTTAAAGTCACTCTCCATCATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS-3UTR CAA 90 bp | ATCCCAAAGCCACAGATAAGGATAGCCTACAGTGGTCTTTATGTTCCTTTGTATCTGGTCTTCAGTTTCTaGATCTGTAAATTGAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: IPKPQIRIAYSGLYVPLYLVFSF*ICKLKD Trigger: GTCTTTCAATTTACAGATCAAGAAACTGAAGACCAG...ATACAAAGGAACATAAAGACCACTGTAGGCTATCCTTATCTGTGGCTTTGGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS TCA 90 bp | TTGTGCTGGCTTGTGAAGCTGCGTTTTCACAATTATCATTGTATGTaGCTCCAGAAATATGAAAATCACCTTGATAATAGTAAGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LCWLVKLRFHNYHCM*LQKYENHLDNSKSS Trigger: AGAAGACTTACTATTATCAAGGTGATTTTCATATTTCTGGAGTCACATACAATGATAATTGTGAAAACGCAGCTTCACAAGCCAGCACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332644.6 ENST00000502365.1 |
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| CDS GCA 72 bp | CTTGCTGATTTCCATGAGTTTAATGGAAGCAGGAACTaGATTCCAGGATGCCATGTTGTTTTTCAACATCTG | + |
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Preference number: 6 (lower is better) Translates to: LADFHEFNGSRN*IPGCHVVFQHL Trigger: CAGATGTTGAAAAACAACATGGCATCCTGGAATGCAGTTCCTGCTTCCATTAAACTCATGGAAATCAGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000332644.6 ENST00000502365.1 |
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| CDS CAA 72 bp | CACAATTTTGTTGCCAGTTATGATACTGTTGGCTACTaGTCTCCCACAACAGTTGTTGGTAAGCATTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: HNFVASYDTVGY*SPTTVVGKHFR Trigger: TCTGAAATGCTTACCAACAACTGTTGTGGGAGACAAGTAGCCAACAGTATCATAACTGGCAACAAAATTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332644.6 |
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| CDS TCA 72 bp | ACTGCATTCCAGGATGCCATGTTGTTTTTCAACATCTaGTGTAATTTAGCCTTGATTTTAGTCCTCATGCTA | + |
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Preference number: 6 (lower is better) Translates to: TAFQDAMLFFNI*CNLALILVLML Trigger: TAGCATGAGGACTAAAATCAAGGCTAAATTACATCAGATGTTGAAAAACAACATGGCATCCTGGAATGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332644.6 ENST00000502365.1 |
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