RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMIGD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000121933

Ensembl transcript IDs: ENST00000369716.9, ENST00000369717.8, ENST00000442484.2, ENST00000443498.5, ENST00000463993.1, ENST00000472933.2

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGGTCCCAGAAGCTCATTCCTTCGACAGGAGCCCGAAGTTTGTGTaGTGGGGAGGTAGGTGGCTCTGCAGATGGGAACCTGGTGTGGTT +
Preference number: 1 (lower is better)
Translates to: AVPEAHSFDRSPKFV*WGGRWLCRWEPGVV
Trigger: AACCACACCAGGTTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGAAGGAATGAGCTTCTGGGACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR CCA 90 bp AGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCTGCAGATaGGAACCTGGTGTGGTTGTCTCAGGACCTCCTTCCTTCCTGACC +
Preference number: 1 (lower is better)
Translates to: RSPKFVCWGGRWLCR*EPGVVVSGPPSFLT
Trigger: GGTCAGGAAGGAAGGAGGTCCTGAGACAACCACACCAGGTTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR CCA 90 bp GTCCCAGAAGCTCATTCCTTCGACAGGAGCCCGAAGTTTGTGTGCTaGGGAGGTAGGTGGCTCTGCAGATGGGAACCTGGTGTGGTTGTC +
Preference number: 1 (lower is better)
Translates to: VPEAHSFDRSPKFVC*GGRWLCRWEPGVVV
Trigger: GACAACCACACCAGGTTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGAAGGAATGAGCTTCTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR GCA 90 bp GCCTTGTCACCATCAAGCAGATATCTACCCCAGCCCATGGCTGGCTaGATTGGTCTCCAGGTGACCAGGCAATATGAAGAGGCTCTCATT +
Preference number: 1 (lower is better)
Translates to: ALSPSSRYLPQPMAG*IGLQVTRQYEEALI
Trigger: AATGAGAGCCTCTTCATATTGCCTGGTCACCTGGAGACCAATGCAGCCAGCCATGGGCTGGGGTAGATATCTGCTTGATGGTGACAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR TCA 90 bp TGTATCCACTTAAGAAAGCTCCAGTGCTCCCTCTGTCACTTCTCGTaGTGCCTTGTCACCATCAAGCAGATATCTACCCCAGCCCATGGC +
Preference number: 1 (lower is better)
Translates to: CIHLRKLQCSLCHFS*CLVTIKQISTPAHG
Trigger: GCCATGGGCTGGGGTAGATATCTGCTTGATGGTGACAAGGCATCACGAGAAGTGACAGAGGGAGCACTGGAGCTTTCTTAAGTGGATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR CCA 90 bp TGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTaGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAATT +
Preference number: 1 (lower is better)
Translates to: WVWSIIAPLTTAVAT*LQMIVVKDRGSFRI
Trigger: AATTCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
3UTR CCA 90 bp GGGTCCTTCAGAATTCCTGGGAGATCAGAATCAGTCTCTGAGGTGTaGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTAT +
Preference number: 1 (lower is better)
Translates to: GSFRIPGRSESVSEV*ASCHGDYSVVASLY
Trigger: ATAAAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTCTGATCTCCCAGGAATTCTGAAGGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
3UTR CAA 90 bp ACCCAGCGGTCCCAGAAGCTCATTCCTTCGACAGGAGCCCGAAGTTaGTGTGCTGGGGAGGTAGGTGGCTCTGCAGATGGGAACCTGGTG +
Preference number: 2 (lower is better)
Translates to: TQRSQKLIPSTGARS*CAGEVGGSADGNLV
Trigger: CACCAGGTTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGAAGGAATGAGCTTCTGGGACCGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR GCA 90 bp GCTCATTCCTTCGACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCCAGCCCATGGCTGGCTaGATTGGTCTCCAGGTGACC +
Preference number: 2 (lower is better)
Translates to: AHSFDRSPKFVCWGGRWLQPMAG*IGLQVT
Trigger: GGTCACCTGGAGACCAATGCAGCCAGCCATGGGCTG...GAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGAAGGAATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR CCA 90 bp TACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTTCGACAGGAGCCCGAAGTTGCTGGGGAGGTAGGTaGCTCTGCAGATGGGAACCT +
Preference number: 2 (lower is better)
Translates to: YLLTQRSQKLIPSTGARSCWGGR*LCRWEP
Trigger: AGGTTCCCATCTGCAGAGCCACCTACCTCCCCAGCA...ACTTCGGGCTCCTGTCGAAGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR TCA 90 bp GGTCCCAGAAGCTCATTCCTTCGACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGCTCTGTCACTTCTCGTaGTGCCTTGTCACCATCAAG +
Preference number: 2 (lower is better)
Translates to: GPRSSFLRQEPEVCVLGRLCHFS*CLVTIK
Trigger: CTTGATGGTGACAAGGCATCACGAGAAGTGACAGAG...CCTCCCCAGCACACAAACTTCGGGCTCCTGTCGAAGGAATGAGCTTCTGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR CCA 90 bp CTCTTCTATACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTTCGACAGGAGCTGCAGATGGGAACCTaGTGTGGTTGTCTCAGGACC +
Preference number: 2 (lower is better)
Translates to: LFYTCLPSGPRSSFLRQELQMGT*CGCLRT
Trigger: GGTCCTGAGACAACCACACCAGGTTCCCATCTGCAG...CTCCTGTCGAAGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTATAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR CCA 90 bp CTCTTCTATACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTTCGACAGGAGAGGTGGCTCTGCAGATaGGAACCTGGTGTGGTTGTC +
Preference number: 2 (lower is better)
Translates to: LFYTCLPSGPRSSFLRQERWLCR*EPGVVV
Trigger: GACAACCACACCAGGTTCCCATCTGCAGAGCCACCT...CTCCTGTCGAAGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTATAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR GCA 90 bp AAAAAGGAGACTCTTCTATACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTGGAGGTAGGTGGCTCTaGAGATGGGAACCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: KKETLLYLLTQRSQKLIPGGRWL*RWEPGV
Trigger: CACACCAGGTTCCCATCTGCAGAGCCACCTACCTCC...AGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTATAGAAGAGTCTCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR CCA 90 bp GTCTCAGGACCTCCTTCCTTCCTGACCTACACATGTATCCACTTAAGAAAGCTCATCTACCCCAGCCCATaGCTGGCTGCATTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: VSGPPSFLTYTCIHLRKLIYPSP*LAALVS
Trigger: GGAGACCAATGCAGCCAGCCATGGGCTGGGGTAGAT...GAGCTTTCTTAAGTGGATACATGTGTAGGTCAGGAAGGAAGGAGGTCCTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR GCA 90 bp AGATGGGAACCTGGTGTGGTTGTCTCAGGACCTCCTTCCTTCCTGACCTACACATTAAGAAAGCTCCAGTaGTCCCTCTGTCACTTCTCG +
Preference number: 2 (lower is better)
Translates to: RWEPGVVVSGPPSFLTYTLRKLQ*SLCHFS
Trigger: CGAGAAGTGACAGAGGGAGCACTGGAGCTTTCTTAA...TGTGTAGGTCAGGAAGGAAGGAGGTCCTGAGACAACCACACCAGGTTCCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR TCA 90 bp CTCAGGACCTCCTTCCTTCCTGACCTACACATGTATCCACTTAAGAAAGCTCCAGGTGACCAGGCAATATaGAGAGGCTCTCATTCACTC +
Preference number: 2 (lower is better)
Translates to: LRTSFLPDLHMYPLKKAPGDQAI*RGSHSL
Trigger: GAGTGAATGAGAGCCTCTTCATATTGCCTGGTCACC...TGGAGCTTTCTTAAGTGGATACATGTGTAGGTCAGGAAGGAAGGAGGTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR GCA 90 bp AGGAGACTCTTCTATACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTTCGAATTTTCTCTAATTCTTaGCCACCCCCTCCCTCAACA +
Preference number: 2 (lower is better)
Translates to: RRLFYTCLPSGPRSSFLRIFSNS*PPPPST
Trigger: TGTTGAGGGAGGGGGTGGGCAAGAATTAGAGAAAAT...TCGAAGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTATAGAAGAGTCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR TCA 90 bp GGAGACTCTTCTATACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTTCGACTTGAAATCTGCTCCTTaGCCTCTTTCATTTTCTCTA +
Preference number: 2 (lower is better)
Translates to: GDSSIPAYPAVPEAHSFDLKSAP*PLSFSL
Trigger: TAGAGAAAATGAAAGAGGTCAAGGAGCAGATTTCAA...GTCGAAGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTATAGAAGAGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR TCA 90 bp CTGATGGAATGCATAAGAACTAAGATCTTGAGATGTTATTTGAGGGCAGCCTTGATCAGAATCAGTCTCTaGGGTGTGGGCCAGTTGTCA +
Preference number: 2 (lower is better)
Translates to: LMECIRTKILRCYLRAALIRISL*GVGQLS
Trigger: TGACAACTGGCCCACACCTCAGAGACTGATTCTGAT...CAAGGCTGCCCTCAAATAACATCTCAAGATCTTAGTTCTTATGCATTCCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
3UTR-3UTR GCA 90 bp ATGGAATGCATAAGAACTAAGATCTTGAGATGTTATTTGAGGGCAGCCTTGCTTTCTGACTACCGCCGTTaGTACCTGGCTGCAAATGAT +
Preference number: 2 (lower is better)
Translates to: MECIRTKILRCYLRAALLSDYRR*YLAAND
Trigger: ATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGA...AAGCAAGGCTGCCCTCAAATAACATCTCAAGATCTTAGTTCTTATGCATTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
3UTR-3UTR TCA 90 bp CTGATGGAATGCATAAGAACTAAGATCTTGAGATGTTATTTGAGGGCAGCCTTGCTACCTGGCTGCAAATaGTTGTTGTCAAGGATAGAG +
Preference number: 2 (lower is better)
Translates to: LMECIRTKILRCYLRAALLPGCK*LLSRIE
Trigger: CTCTATCCTTGACAACAATCATTTGCAGCCAGGTAG...CAAGGCTGCCCTCAAATAACATCTCAAGATCTTAGTTCTTATGCATTCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
3UTR CCA 72 bp GCTCATTCCTTCGACAGGAGCCCGAAGTTTGTGTGCTaGGGAGGTAGGTGGCTCTGCAGATGGGAACCTGGT +
Preference number: 3 (lower is better)
Translates to: AHSFDRSPKFVC*GGRWLCRWEPG
Trigger: ACCAGGTTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGAAGGAATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR GCA 72 bp GAAGCTCATTCCTTCGACAGGAGCCCGAAGTTTGTGTaGTGGGGAGGTAGGTGGCTCTGCAGATGGGAACCT +
Preference number: 3 (lower is better)
Translates to: EAHSFDRSPKFV*WGGRWLCRWEP
Trigger: AGGTTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGAAGGAATGAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR CCA 72 bp AAGTTTGTGTGCTGGGGAGGTAGGTGGCTCTGCAGATaGGAACCTGGTGTGGTTGTCTCAGGACCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: KFVCWGGRWLCR*EPGVVVSGPPS
Trigger: GGAAGGAGGTCCTGAGACAACCACACCAGGTTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR GCA 72 bp CCATCAAGCAGATATCTACCCCAGCCCATGGCTGGCTaGATTGGTCTCCAGGTGACCAGGCAATATGAAGAG +
Preference number: 3 (lower is better)
Translates to: PSSRYLPQPMAG*IGLQVTRQYEE
Trigger: CTCTTCATATTGCCTGGTCACCTGGAGACCAATGCAGCCAGCCATGGGCTGGGGTAGATATCTGCTTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR CCA 72 bp CTTGAGATGTTATTTGAGGGCAGCCTTGCTTGGGTGTaGTCTATCATAGCTCCTCTGACTACCGCCGTTGCT +
Preference number: 3 (lower is better)
Translates to: LEMLFEGSLAWV*SIIAPLTTAVA
Trigger: AGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAACATCTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
3UTR-3UTR CAA 90 bp CTCTTCTATACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTTCGACAGGAGACTTCTCGTGATGCCTaGTCACCATCAAGCAGATAT +
Preference number: 3 (lower is better)
Translates to: LFYTCLPSGPRSSFLRQETSRDA*SPSSRY
Trigger: ATATCTGCTTGATGGTGACAAGGCATCACGAGAAGT...CTCCTGTCGAAGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTATAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR CCA 72 bp TCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTaGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: SIIAPLTTAVAT*LQMIVVKDRGS
Trigger: GGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
3UTR TCA 72 bp TTAAGAAAGCTCCAGTGCTCCCTCTGTCACTTCTCGTaGTGCCTTGTCACCATCAAGCAGATATCTACCCCA +
Preference number: 3 (lower is better)
Translates to: LRKLQCSLCHFS*CLVTIKQISTP
Trigger: TGGGGTAGATATCTGCTTGATGGTGACAAGGCATCACGAGAAGTGACAGAGGGAGCACTGGAGCTTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
3UTR-3UTR CAA 90 bp GGAACCTGGTGTGGTTGTCTCAGGACCTCCTTCCTTCCTGACCTACACATGTATTTTGAAATCTGCTCCTaGACCTCTTTCATTTTCTCT +
Preference number: 3 (lower is better)
Translates to: GTWCGCLRTSFLPDLHMYFEICS*TSFIFS
Trigger: AGAGAAAATGAAAGAGGTCAAGGAGCAGATTTCAAA...ATACATGTGTAGGTCAGGAAGGAAGGAGGTCCTGAGACAACCACACCAGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR GCA 90 bp TCGACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCTGCAGATGGGGGAGGTAGGTGGCTCTaGAGATGGGAACCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: STGARSLCAGEVGGSADGGGRWL*RWEPGV
Trigger: CACACCAGGTTCCCATCTGCAGAGCCACCTACCTCC...CCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR GCA 90 bp TACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTTCGACAGGAGCCCGAAGTCAGCCCATGGCTGGCTaGATTGGTCTCCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: YLLTQRSQKLIPSTGARSQPMAG*IGLQVT
Trigger: GGTCACCTGGAGACCAATGCAGCCAGCCATGGGCTG...ACTTCGGGCTCCTGTCGAAGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR GCA 90 bp GCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCACCTGGCCTCCTTCTaGTCAATGGGTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AWVWSIIAPLTTAVATWLHLASF*SMGPAG
Trigger: TCCAGCAGGACCCATTGAGCAGAAGGAGGCCAGGTG...CAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369717.8
CDS-3UTR CCA 90 bp GACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCTGCAGATGGGAATTCGGCACTCAAGCCTaGGCAACAGGGCAACATCCT +
Preference number: 4 (lower is better)
Translates to: DRSPKFVCWGGRWLCRWEFGTQA*ATGQHP
Trigger: AGGATGTTGCCCTGTTGCCCAGGCTTGAGTGCCGAA...TTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR TCA 90 bp GCTCATTCCTTCGACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCGCATTGGTCTCCAGGTaGCCAGGCAATATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AHSFDRSPKFVCWGGRWLALVSR*PGNMKR
Trigger: CCTCTTCATATTGCCTGGTCACCTGGAGACCAATGC...GAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGAAGGAATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp TGTCACCATCAAGCAGATATCTACCCCAGCCCATGGCTGGCTGCATTGGTCTCCCCGAAGTTTGTGTGCTaGGGAGGTAGGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CHHQADIYPSPWLAALVSPKFVC*GGRWLC
Trigger: GCAGAGCCACCTACCTCCCCAGCACACAAACTTCGG...GGAGACCAATGCAGCCAGCCATGGGCTGGGGTAGATATCTGCTTGATGGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR GCA 90 bp GTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAATGATCAAAGTCCCGCTGGATaGCACACCAGTACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: VVYHSSSDYRRCYLAANDQSPAG*HTSTSP
Trigger: CGGGCTGGTACTGGTGTGGCATCCAGCGGGACTTTG...ATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp ACCGCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCGCCCAGTGTCCAGTCTaGCTGCTCTTCCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TAVATWLQMIVVKDRGSFAQCPV*LLFPGA
Trigger: AGCTCCTGGGAAGAGCAGCCAGACTGGACACTGGGC...GAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369717.8
CDS-3UTR CCA 90 bp AGATGGGAACCTGGTGTGGTTGTCTCAGGACCTCCTTCCTTCCTGACCTACACAATCTACCCCAGCCCATaGCTGGCTGCATTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RWEPGVVVSGPPSFLTYTIYPSP*LAALVS
Trigger: GGAGACCAATGCAGCCAGCCATGGGCTGGGGTAGAT...TGTGTAGGTCAGGAAGGAAGGAGGTCCTGAGACAACCACACCAGGTTCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR GCA 90 bp TTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCCAAAGTCCCGCTGGATaGCACACCAGTACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LFEGSLAWVWSIIAPLTTQSPAG*HTSTSP
Trigger: CGGGCTGGTACTGGTGTGGCATCCAGCGGGACTTTG...GGTAGTCAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR GCA 90 bp GACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCTGCAGATGGGAATTAAGAAAGCTCCAGTaGTCCCTCTGTCACTTCTCG +
Preference number: 4 (lower is better)
Translates to: DRSPKFVCWGGRWLCRWELRKLQ*SLCHFS
Trigger: CGAGAAGTGACAGAGGGAGCACTGGAGCTTTCTTAA...TTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp TGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAAATCCATGTCATCCCTaGCAAAGTCCCGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: WVWSIIAPLTTAVATWLQNPCHP*QSPAGC
Trigger: GCATCCAGCGGGACTTTGCCAGGGATGACATGGATT...TTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GCTCATTCCTTCGACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCCAGACCAAAAGTCATTaGCCAGGGTTCCTTTGTCGT +
Preference number: 4 (lower is better)
Translates to: AHSFDRSPKFVCWGGRWLQTKSH*PGFLCR
Trigger: ACGACAAAGGAACCCTGGCCAATGACTTTTGGTCTG...GAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGAAGGAATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp AGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCTGCAGATGGGAACCTGGTGAGCCTTGCAGCTTCTaGTTTTGTTGCCTGATAGGT +
Preference number: 4 (lower is better)
Translates to: SPKFVCWGGRWLCRWEPGEPCSF*FCCLIG
Trigger: ACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTC...ACCAGGTTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp GCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGAGCCTTGCTTGGGTGTaGTCTATCATAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AWVWSIIAPLTTAVATWLSLAWV*SIIAPL
Trigger: CAGAGGAGCTATGATAGACCACACCCAAGCAAGGCT...CAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp TTGTCACCATCAAGCAGATATCTACCCCAGCCCATGGCTGGCTGCATTGGTCTCAGGTGGCTCTGCAGATaGGAACCTGGTGTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: LSPSSRYLPQPMAGCIGLRWLCR*EPGVVV
Trigger: GACAACCACACCAGGTTCCCATCTGCAGAGCCACCT...GAGACCAATGCAGCCAGCCATGGGCTGGGGTAGATATCTGCTTGATGGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR TCA 90 bp GCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCCATGGCATCTGAAATaGGAGCCAAGGAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: AWVWSIIAPLTTAVATWLPWHLK*EPRRVE
Trigger: TTCTACTCTCCTTGGCTCTCATTTCAGATGCCATGG...CAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp TGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAATCAGAATCAGTCTCTaGGGTGTGGGCCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: WVWSIIAPLTTAVATWLQIRISL*GVGQLS
Trigger: TGACAACTGGCCCACACCTCAGAGACTGATTCTGAT...TTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR GCA 90 bp TGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAATCTGACTACCGCCGTTaGTACCTGGCTGCAAATGAT +
Preference number: 4 (lower is better)
Translates to: WVWSIIAPLTTAVATWLQSDYRR*YLAAND
Trigger: ATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGA...TTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp TGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAACTCGGCACCAGTATTTaGGGTGATTCTTGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: WVWSIIAPLTTAVATWLQLGTSI*GDSCSG
Trigger: CCCACTACAAGAATCACCCCAAATACTGGTGCCGAG...TTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAATGATCCTCCTTCTGCTCAATaGGTCCTGCTGGAGACCCTT +
Preference number: 4 (lower is better)
Translates to: VVYHSSSDYRRCYLAANDPPSAQ*VLLETL
Trigger: AAGGGTCTCCAGCAGGACCCATTGAGCAGAAGGAGG...ATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369717.8
CDS-3UTR CCA 90 bp GGAGACTCTTCTATACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTTCGACGATGGGAACCTGGTGTaGTTGTCTCAGGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: GDSSIPAYPAVPEAHSFDDGNLV*LSQDLL
Trigger: AAGGAGGTCCTGAGACAACCACACCAGGTTCCCATC...GTCGAAGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTATAGAAGAGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp GGAACCTGGTGTGGTTGTCTCAGGACCTCCTTCCTTCCTGACCTACACATGTATCTGCAGATGGGAACCTaGTGTGGTTGTCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: GTWCGCLRTSFLPDLHMYLQMGT*CGCLRT
Trigger: GGTCCTGAGACAACCACACCAGGTTCCCATCTGCAG...ATACATGTGTAGGTCAGGAAGGAAGGAGGTCCTGAGACAACCACACCAGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp TGGTGTGGTTGTCTCAGGACCTCCTTCCTTCCTGACCTACACATGTATCCACTTTGCTGGGGAGGTAGGTaGCTCTGCAGATGGGAACCT +
Preference number: 4 (lower is better)
Translates to: WCGCLRTSFLPDLHMYPLCWGGR*LCRWEP
Trigger: AGGTTCCCATCTGCAGAGCCACCTACCTCCCCAGCA...AAGTGGATACATGTGTAGGTCAGGAAGGAAGGAGGTCCTGAGACAACCACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR TCA 90 bp AGATGGGAACCTGGTGTGGTTGTCTCAGGACCTCCTTCCTTCCTGACCTACACAGGTGACCAGGCAATATaGAGAGGCTCTCATTCACTC +
Preference number: 4 (lower is better)
Translates to: RWEPGVVVSGPPSFLTYTGDQAI*RGSHSL
Trigger: GAGTGAATGAGAGCCTCTTCATATTGCCTGGTCACC...TGTGTAGGTCAGGAAGGAAGGAGGTCCTGAGACAACCACACCAGGTTCCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp GGAACCTGGTGTGGTTGTCTCAGGACCTCCTTCCTTCCTGACCTACACATGTATAATCCATGTCATCCCTaGCAAAGTCCCGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: GTWCGCLRTSFLPDLHMYNPCHP*QSPAGC
Trigger: GCATCCAGCGGGACTTTGCCAGGGATGACATGGATT...ATACATGTGTAGGTCAGGAAGGAAGGAGGTCCTGAGACAACCACACCAGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp TGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAACAGACCAAAAGTCATTaGCCAGGGTTCCTTTGTCGT +
Preference number: 4 (lower is better)
Translates to: WVWSIIAPLTTAVATWLQQTKSH*PGFLCR
Trigger: ACGACAAAGGAACCCTGGCCAATGACTTTTGGTCTG...TTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GAGATGTTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGCCTTGCGGACAACTTTaGGAGCCTTGCAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EMLFEGSLAWVWSIIAPLPCGQL*EPCSFW
Trigger: CCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGG...CAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAACATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GATCAGAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGGCCCAGTGTCCAGTCTaGCTGCTCTTCCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DQNQSLRCGPVVMVIILLAQCPV*LLFPGA
Trigger: AGCTCCTGGGAAGAGCAGCCAGACTGGACACTGGGC...CAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTCTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369717.8
ENST00000443498.5
CDS-3UTR TCA 90 bp GTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAATGATCATGACCATGGCATCTaGAATGAGAGCCAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: VVYHSSSDYRRCYLAANDHDHGI*NESQGE
Trigger: CTCTCCTTGGCTCTCATTTCAGATGCCATGGTCATG...ATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR GCA 90 bp ACCGCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCACTGGAATGATAGAATaGACCCAGGGAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TAVATWLQMIVVKDRGSFTGMIE*TQGAQE
Trigger: TTCCTGGGCTCCCTGGGTGCATTCTATCATTCCAGT...GAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR GCA 90 bp GTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTGGAGCGGTCAGCCTTaGGGACAACTTTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: VSEVWASCHGDYSVVASLWSGQP*GQLWEP
Trigger: AGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCA...AAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR GCA 90 bp GGTCTCCAGGTGACCAGGCAATATGAAGAGGCTCTCATTCACTCATTTGAAATCTGGAGCGGTCAGCCTTaGGGACAACTTTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GLQVTRQYEEALIHSFEIWSGQP*GQLWEP
Trigger: AGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCA...GATTTCAAATGAGTGAATGAGAGCCTCTTCATATTGCCTGGTCACCTGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR GCA 90 bp TATATGAAAAAGGAGACTCTTCTATACCTGCTTACCCAGCGGTCCCAGAAGCTCAGCCCGAAGTTTGTGTaGTGGGGAGGTAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: YMKKETLLYLLTQRSQKLSPKFV*WGGRWL
Trigger: GAGCCACCTACCTCCCCAGCACACAAACTTCGGGCT...GAGCTTCTGGGACCGCTGGGTAAGCAGGTATAGAAGAGTCTCCTTTTTCATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR GCA 90 bp ACTTCTCGTGATGCCTTGTCACCATCAAGCAGATATCTACCCCAGCCCATGGCTAGACTCTTCTATACCTaGTTACCCAGCGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TSRDALSPSSRYLPQPMARLFYT*LPSGPR
Trigger: TCTGGGACCGCTGGGTAAGCAGGTATAGAAGAGTCT...AGCCATGGGCTGGGGTAGATATCTGCTTGATGGTGACAAGGCATCACGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp GAGATGTTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGAATCCATGTCATCCCTaGCAAAGTCCCGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: EMLFEGSLAWVWSIIAPLNPCHP*QSPAGC
Trigger: GCATCCAGCGGGACTTTGCCAGGGATGACATGGATT...CAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAACATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp CTCAGGACCTCCTTCCTTCCTGACCTACACATGTATCCACTTAAGAAAGCTCCACCTTGCGGACAACTTTaGGAGCCTTGCAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LRTSFLPDLHMYPLKKAPPCGQL*EPCSFW
Trigger: CCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGG...TGGAGCTTTCTTAAGTGGATACATGTGTAGGTCAGGAAGGAAGGAGGTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp GAGATGTTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGGAGGGCAGCCTTGCTTaGGTGTGGTCTATCATAGCT +
Preference number: 4 (lower is better)
Translates to: EMLFEGSLAWVWSIIAPLEGSLA*VWSIIA
Trigger: AGCTATGATAGACCACACCCAAGCAAGGCTGCCCTC...CAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAACATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp TCAAGGATAGAGGGTCCTTCAGAATTCCTGGGAGATCAGAATCAGTCTCTGAGGAGGAGCTTTCCCACCTaGCCTCCTTCTGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: SRIEGPSEFLGDQNQSLRRSFPT*PPSAQW
Trigger: CCATTGAGCAGAAGGAGGCCAGGTGGGAAAGCTCCT...CCTCAGAGACTGATTCTGATCTCCCAGGAATTCTGAAGGACCCTCTATCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369717.8
CDS-3UTR TCA 90 bp GTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAATGATCCATGGCATCTGAAATaGGAGCCAAGGAGAGTAGAA +
Preference number: 4 (lower is better)
Translates to: VVYHSSSDYRRCYLAANDPWHLK*EPRRVE
Trigger: TTCTACTCTCCTTGGCTCTCATTTCAGATGCCATGG...ATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp TTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCCATGACCATGGCATCTaGAATGAGAGCCAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LFEGSLAWVWSIIAPLTTHDHGI*NESQGE
Trigger: CTCTCCTTGGCTCTCATTTCAGATGCCATGGTCATG...GGTAGTCAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp CTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAATTCCTGGGAGATCATCCCTCAGGGCCACATaGTTGGTGCTGTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LQMIVVKDRGSFRIPGRSSLRAT*LVLLGE
Trigger: CTCCCCTAACAGCACCAATCATGTGGCCCTGAGGGA...TGATCTCCCAGGAATTCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp GCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAATCAGAATCAGTCTCTaGGGTGTGGGCCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: AVATWLQMIVVKDRGSFRIRISL*GVGQLS
Trigger: TGACAACTGGCCCACACCTCAGAGACTGATTCTGAT...TCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp GATCAGAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTCCCTCAGGGCCACATaGTTGGTGTGTGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: DQNQSLRCGPVVMVIILLSLRAT*LVCDSG
Trigger: TCCTGAGTCACACACCAATCATGTGGCCCTGAGGGA...CAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTCTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443498.5
CDS-3UTR GCA 90 bp GAGATGTTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGAGTGGGCATTGTAGTTaGAGATGGCAGAAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: EMLFEGSLAWVWSIIAPLSGHCS*RWQKPC
Trigger: ACACGGCTTCTGCCATCTGCAACTACAATGCCCACT...CAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAACATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR GCA 90 bp GTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAATGATCAACTTTGGGAGCCTTaGAGCTTCTGGTTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: VVYHSSSDYRRCYLAANDQLWEP*SFWFCC
Trigger: GCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTG...ATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR GCA 90 bp TTGTCACCATCAAGCAGATATCTACCCCAGCCCATGGCTGGCTGCATTGGTCTCATTTTCTCTAATTCTTaGCCACCCCCTCCCTCAACA +
Preference number: 4 (lower is better)
Translates to: LSPSSRYLPQPMAGCIGLIFSNS*PPPPST
Trigger: TGTTGAGGGAGGGGGTGGGCAAGAATTAGAGAAAAT...GAGACCAATGCAGCCAGCCATGGGCTGGGGTAGATATCTGCTTGATGGTGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp TTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCCTCGGCACCAGTATTTaGGGTGATTCTTGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: LFEGSLAWVWSIIAPLTTLGTSI*GDSCSG
Trigger: CCCACTACAAGAATCACCCCAAATACTGGTGCCGAG...GGTAGTCAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAATGATGAGCCTTGCAGCTTCTaGTTTTGTTGCCTGATAGGT +
Preference number: 4 (lower is better)
Translates to: VVYHSSSDYRRCYLAANDEPCSF*FCCLIG
Trigger: ACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTC...ATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCACCTTGCGGACAACTTTaGGAGCCTTGCAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ESVSEVWASCHGDYSVVAPCGQL*EPCSFW
Trigger: CCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGG...TGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CCA 90 bp GAGATGTTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGAGGAGCCATTTCCTTTaGAGTCAGGACACGCGAGAA +
Preference number: 4 (lower is better)
Translates to: EMLFEGSLAWVWSIIAPLRSHFL*SQDTRE
Trigger: TTCTCGCGTGTCCTGACTCCAAAGGAAATGGCTCCT...CAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAACATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp TTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCAGGAGCCATTTCCTTTaGAGTCAGGACACGCGAGAA +
Preference number: 4 (lower is better)
Translates to: LFEGSLAWVWSIIAPLTTRSHFL*SQDTRE
Trigger: TTCTCGCGTGTCCTGACTCCAAAGGAAATGGCTCCT...GGTAGTCAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GAGATGTTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGAGCCTTGCTTGGGTGTaGTCTATCATAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: EMLFEGSLAWVWSIIAPLSLAWV*SIIAPL
Trigger: CAGAGGAGCTATGATAGACCACACCCAAGCAAGGCT...CAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAACATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp GATCAGAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGCACATGATTGGTGTGTaGCTCAGGACTCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: DQNQSLRCGPVVMVIILLHMIGV*LRTQAA
Trigger: GGCTGCTTGAGTCCTGAGTCACACACCAATCATGTG...CAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443498.5
CDS-3UTR GCA 90 bp ACTTCTCGTGATGCCTTGTCACCATCAAGCAGATATCTACCCCAGCCCATGGCTAGCTTCTGGTTTTGTTaGCTGATAGGTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TSRDALSPSSRYLPQPMASFWFC*LIGLSQ
Trigger: CTGGGAAAGACCTATCAGGCAACAAAACCAGAAGCT...AGCCATGGGCTGGGGTAGATATCTGCTTGATGGTGACAAGGCATCACGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR GCA 90 bp GCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGACAACTTTGGGAGCCTTaGAGCTTCTGGTTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: AVATWLQMIVVKDRGSFRQLWEP*SFWFCC
Trigger: GCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTG...TCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR GCA 90 bp GAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTATGAATGGAGCGGTCAGCCTTaGGGACAACTTTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: EVWASCHGDYSVVASLYEWSGQP*GQLWEP
Trigger: AGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCA...TTCATAAAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR GCA 90 bp TACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTTCGACAGGAGCCCGAAGTCACTCATTTGAAATCTaGTCCTTGACCTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: YLLTQRSQKLIPSTGARSHSFEI*SLTSFI
Trigger: AATGAAAGAGGTCAAGGAGCAGATTTCAAATGAGTG...ACTTCGGGCTCCTGTCGAAGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp GTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTAATCCATGTCATCCCTaGCAAAGTCCCGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: VSEVWASCHGDYSVVASLNPCHP*QSPAGC
Trigger: GCATCCAGCGGGACTTTGCCAGGGATGACATGGATT...AAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CCA 90 bp ACCGCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCGTCCTTCAGAATTCCTaGGAGATCAGAATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TAVATWLQMIVVKDRGSFVLQNS*EIRISL
Trigger: GAGACTGATTCTGATCTCCCAGGAATTCTGAAGGAC...GAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp CTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAATTCCTGGGAGATCACTCAATGGGTCCTGCTaGAGACCCTTCCATTGGTCC +
Preference number: 4 (lower is better)
Translates to: LQMIVVKDRGSFRIPGRSLNGSC*RPFHWS
Trigger: GGACCAATGGAAGGGTCTCCAGCAGGACCCATTGAG...TGATCTCCCAGGAATTCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369717.8
CDS-3UTR TCA 90 bp GCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGACTACCTGGCTGCAAATaGTTGTTGTCAAGGATAGAG +
Preference number: 4 (lower is better)
Translates to: AVATWLQMIVVKDRGSFRLPGCK*LLSRIE
Trigger: CTCTATCCTTGACAACAATCATTTGCAGCCAGGTAG...TCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp ACCGCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCCTAACAAAATACAAGTaGTTTCCTGGTCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: TAVATWLQMIVVKDRGSFLTKYK*FPGPQS
Trigger: GGATTGGGGACCAGGAAATCACTTGTATTTTGTTAG...GAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR GCA 90 bp GAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCAAGTGGGCATTGTAGTTaGAGATGGCAGAAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: ESVSEVWASCHGDYSVVASGHCS*RWQKPC
Trigger: ACACGGCTTCTGCCATCTGCAACTACAATGCCCACT...TGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR GCA 90 bp TTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCAGCTTCTGGTTTTGTTaGCTGATAGGTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LFEGSLAWVWSIIAPLTTSFWFC*LIGLSQ
Trigger: CTGGGAAAGACCTATCAGGCAACAAAACCAGAAGCT...GGTAGTCAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp CTGATGGAATGCATAAGAACTAAGATCTTGAGATGTTATTTGAGGGCAGCCTTGCTGGCAAAGTCCCGCTaGATGCCACACCAGTACCAG +
Preference number: 4 (lower is better)
Translates to: LMECIRTKILRCYLRAALLAKSR*MPHQYQ
Trigger: CTGGTACTGGTGTGGCATCCAGCGGGACTTTGCCAG...CAAGGCTGCCCTCAAATAACATCTCAAGATCTTAGTTCTTATGCATTCCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTATGAACCTTGCGGACAACTTTaGGAGCCTTGCAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EVWASCHGDYSVVASLYEPCGQL*EPCSFW
Trigger: CCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGG...TTCATAAAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CCA 90 bp GCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAGTCCTTCAGAATTCCTaGGAGATCAGAATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: AVATWLQMIVVKDRGSFRVLQNS*EIRISL
Trigger: GAGACTGATTCTGATCTCCCAGGAATTCTGAAGGAC...TCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp CTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAATTCCTGGGAGATCAGAGGGCAGCCTTGCTTaGGTGTGGTCTATCATAGCT +
Preference number: 4 (lower is better)
Translates to: LQMIVVKDRGSFRIPGRSEGSLA*VWSIIA
Trigger: AGCTATGATAGACCACACCCAAGCAAGGCTGCCCTC...TGATCTCCCAGGAATTCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTATGAAAGGAGCTTTCCCACCTaGCCTCCTTCTGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: EVWASCHGDYSVVASLYERSFPT*PPSAQW
Trigger: CCATTGAGCAGAAGGAGGCCAGGTGGGAAAGCTCCT...TTCATAAAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CCA 90 bp GTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTCAGGGCCACATGATTaGTGTGTGACTCAGGACTCA +
Preference number: 4 (lower is better)
Translates to: VSEVWASCHGDYSVVASLSGPHD*CVTQDS
Trigger: TGAGTCCTGAGTCACACACCAATCATGTGGCCCTGA...AAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443498.5
CDS-3UTR TCA 90 bp TCAAGGATAGAGGGTCCTTCAGAATTCCTGGGAGATCAGAATCAGTCTCTGAGGCTACCTGGCTGCAAATaGTTGTTGTCAAGGATAGAG +
Preference number: 4 (lower is better)
Translates to: SRIEGPSEFLGDQNQSLRLPGCK*LLSRIE
Trigger: CTCTATCCTTGACAACAATCATTTGCAGCCAGGTAG...CCTCAGAGACTGATTCTGATCTCCCAGGAATTCTGAAGGACCCTCTATCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR GCA 90 bp CAGGTGACCAGGCAATATGAAGAGGCTCTCATTCACTCATTTGAAATCTGCTCCCAACTTTGGGAGCCTTaGAGCTTCTGGTTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: QVTRQYEEALIHSFEICSQLWEP*SFWFCC
Trigger: GCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTG...GGAGCAGATTTCAAATGAGTGAATGAGAGCCTCTTCATATTGCCTGGTCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CCA 90 bp GATCAGAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGGAGCCTTGCAGCTTCTaGTTTTGTTGCCTGATAGGT +
Preference number: 4 (lower is better)
Translates to: DQNQSLRCGPVVMVIILLEPCSF*FCCLIG
Trigger: ACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTC...CAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CCA 90 bp GAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCAGAGCCTTGCAGCTTCTaGTTTTGTTGCCTGATAGGT +
Preference number: 4 (lower is better)
Translates to: ESVSEVWASCHGDYSVVAEPCSF*FCCLIG
Trigger: ACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTC...TGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CCA 90 bp TTGGCTAACAAAATACAAGTGATTTCCTGGTCCCCAATCCAGATTCTCCACCTCACCGCCGTTGCTACCTaGCTGCAAATGATTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LANKIQVISWSPIQILHLTAVAT*LQMIVV
Trigger: GACAACAATCATTTGCAGCCAGGTAGCAACGGCGGT...GAGGTGGAGAATCTGGATTGGGGACCAGGAAATCACTTGTATTTTGTTAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp AGGAGACTCTTCTATACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTTCGACTCCTTTTGGTCAAATaGCTGATTACAGAGATGATT +
Preference number: 4 (lower is better)
Translates to: RRLFYTCLPSGPRSSFLRLLLVK*LITEMI
Trigger: AATCATCTCTGTAATCAGTCATTTGACCAAAAGGAG...TCGAAGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTATAGAAGAGTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR TCA 90 bp GAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCAGGCCAGTTGTCATGGTaGTTATTCTGTTGTAGCATC +
Preference number: 4 (lower is better)
Translates to: ESVSEVWASCHGDYSVVAGQLSW*LFCCSI
Trigger: GATGCTACAACAGAATAATCACCATGACAACTGGCC...TGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR TCA 90 bp GAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTATGAAATCAGAATCAGTCTCTaGGGTGTGGGCCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: EVWASCHGDYSVVASLYEIRISL*GVGQLS
Trigger: TGACAACTGGCCCACACCTCAGAGACTGATTCTGAT...TTCATAAAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR TCA 90 bp TCAAGGATAGAGGGTCCTTCAGAATTCCTGGGAGATCAGAATCAGTCTCTGAGGCCTCTTCTTCACTTCTaGCTGATGGAATGCATAAGA +
Preference number: 4 (lower is better)
Translates to: SRIEGPSEFLGDQNQSLRPLLHF*LMECIR
Trigger: TCTTATGCATTCCATCAGTCAGAAGTGAAGAAGAGG...CCTCAGAGACTGATTCTGATCTCCCAGGAATTCTGAAGGACCCTCTATCCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp TCAGGACCTCCTTCCTTCCTGACCTACACATGTATCCACTTAAGAAAGCTCCAGTCTCATTCACTCATTTaGAATCTGCTCCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: SGPPSFLTYTCIHLRKLQSHSLI*NLLLDL
Trigger: GAGGTCAAGGAGCAGATTTCAAATGAGTGAATGAGA...CTGGAGCTTTCTTAAGTGGATACATGTGTAGGTCAGGAAGGAAGGAGGTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR TCA 90 bp AGGCAATATGAAGAGGCTCTCATTCACTCATTTGAAATCTGCTCCTTGACCTCTCTCTGTCACTTCTCGTaGTGCCTTGTCACCATCAAG +
Preference number: 4 (lower is better)
Translates to: RQYEEALIHSFEICSLTSLCHFS*CLVTIK
Trigger: CTTGATGGTGACAAGGCATCACGAGAAGTGACAGAG...AGAGGTCAAGGAGCAGATTTCAAATGAGTGAATGAGAGCCTCTTCATATTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR GCA 90 bp GATCAGAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGAGCTTCTGGTTTTGTTaGCTGATAGGTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: DQNQSLRCGPVVMVIILLSFWFC*LIGLSQ
Trigger: CTGGGAAAGACCTATCAGGCAACAAAACCAGAAGCT...CAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR GCA 90 bp GAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCAAGCTTCTGGTTTTGTTaGCTGATAGGTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ESVSEVWASCHGDYSVVASFWFC*LIGLSQ
Trigger: CTGGGAAAGACCTATCAGGCAACAAAACCAGAAGCT...TGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CCA 90 bp GTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAATGATAAGCAAACTTTCAACTaGAATGATAGAATGCACCCA +
Preference number: 4 (lower is better)
Translates to: VVYHSSSDYRRCYLAANDKQTFN*NDRMHP
Trigger: TGGGTGCATTCTATCATTCCAGTTGAAAGTTTGCTT...ATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp CTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAATTCCTGGGAGATCACAGACCAAAAGTCATTaGCCAGGGTTCCTTTGTCGT +
Preference number: 4 (lower is better)
Translates to: LQMIVVKDRGSFRIPGRSQTKSH*PGFLCR
Trigger: ACGACAAAGGAACCCTGGCCAATGACTTTTGGTCTG...TGATCTCCCAGGAATTCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTATGAAAGGAGCCATTTCCTTTaGAGTCAGGACACGCGAGAA +
Preference number: 4 (lower is better)
Translates to: EVWASCHGDYSVVASLYERSHFL*SQDTRE
Trigger: TTCTCGCGTGTCCTGACTCCAAAGGAAATGGCTCCT...TTCATAAAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CCA 90 bp GAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCAGTCCTTCAGAATTCCTaGGAGATCAGAATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: ESVSEVWASCHGDYSVVAVLQNS*EIRISL
Trigger: GAGACTGATTCTGATCTCCCAGGAATTCTGAAGGAC...TGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR TCA 90 bp CTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAATTCCTGGGAGATCAGGCCAGTTGTCATGGTaGTTATTCTGTTGTAGCATC +
Preference number: 4 (lower is better)
Translates to: LQMIVVKDRGSFRIPGRSGQLSW*LFCCSI
Trigger: GATGCTACAACAGAATAATCACCATGACAACTGGCC...TGATCTCCCAGGAATTCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR GCA 90 bp GAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTATGAACAACTTTGGGAGCCTTaGAGCTTCTGGTTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: EVWASCHGDYSVVASLYEQLWEP*SFWFCC
Trigger: GCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTG...TTCATAAAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR GCA 90 bp CTGATGGAATGCATAAGAACTAAGATCTTGAGATGTTATTTGAGGGCAGCCTTGTCTGACTACCGCCGTTaGTACCTGGCTGCAAATGAT +
Preference number: 4 (lower is better)
Translates to: LMECIRTKILRCYLRAALSDYRR*YLAAND
Trigger: ATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGA...CAAGGCTGCCCTCAAATAACATCTCAAGATCTTAGTTCTTATGCATTCCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAAAGCAAACTTTCAACTaGAATGATAGAATGCACCCA +
Preference number: 4 (lower is better)
Translates to: AVATWLQMIVVKDRGSFRKQTFN*NDRMHP
Trigger: TGGGTGCATTCTATCATTCCAGTTGAAAGTTTGCTT...TCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp GAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTATGAACAGACCAAAAGTCATTaGCCAGGGTTCCTTTGTCGT +
Preference number: 4 (lower is better)
Translates to: EVWASCHGDYSVVASLYEQTKSH*PGFLCR
Trigger: ACGACAAAGGAACCCTGGCCAATGACTTTTGGTCTG...TTCATAAAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CCA 90 bp GTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTATACAAGTGATTTCCTaGTCCCCAATCCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: VSEVWASCHGDYSVVASLIQVIS*SPIQIL
Trigger: GAGAATCTGGATTGGGGACCAGGAAATCACTTGTAT...AAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp TTGGCTAACAAAATACAAGTGATTTCCTGGTCCCCAATCCAGATTCTCCACCTCCTAACAAAATACAAGTaGTTTCCTGGTCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: LANKIQVISWSPIQILHLLTKYK*FPGPQS
Trigger: GGATTGGGGACCAGGAAATCACTTGTATTTTGTTAG...GAGGTGGAGAATCTGGATTGGGGACCAGGAAATCACTTGTATTTTGTTAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp ATGGAATGCATAAGAACTAAGATCTTGAGATGTTATTTGAGGGCAGCCTTGCTTACCGCCGTTGCTACCTaGCTGCAAATGATTGTTGTC +
Preference number: 4 (lower is better)
Translates to: MECIRTKILRCYLRAALLTAVAT*LQMIVV
Trigger: GACAACAATCATTTGCAGCCAGGTAGCAACGGCGGT...AAGCAAGGCTGCCCTCAAATAACATCTCAAGATCTTAGTTCTTATGCATTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp GATCAGAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGCTCCTTTTGGTCAAATaGCTGATTACAGAGATGATT +
Preference number: 4 (lower is better)
Translates to: DQNQSLRCGPVVMVIILLLLLVK*LITEMI
Trigger: AATCATCTCTGTAATCAGTCATTTGACCAAAAGGAG...CAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTCTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR TCA 90 bp TTGGCTAACAAAATACAAGTGATTTCCTGGTCCCCAATCCAGATTCTCCACCTCCTCCTTTTGGTCAAATaGCTGATTACAGAGATGATT +
Preference number: 4 (lower is better)
Translates to: LANKIQVISWSPIQILHLLLLVK*LITEMI
Trigger: AATCATCTCTGTAATCAGTCATTTGACCAAAAGGAG...GAGGTGGAGAATCTGGATTGGGGACCAGGAAATCACTTGTATTTTGTTAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp GTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAATTCTCCTTTTGGTCAAATaGCTGATTACAGAGATGATT +
Preference number: 4 (lower is better)
Translates to: VATWLQMIVVKDRGSFRILLLVK*LITEMI
Trigger: AATCATCTCTGTAATCAGTCATTTGACCAAAAGGAG...AATTCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR TCA 90 bp GTGACCAGGCAATATGAAGAGGCTCTCATTCACTCATTTGAAATCTGCTCCTTGTTGAAATCTGCTCCTTaGCCTCTTTCATTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: VTRQYEEALIHSFEICSLLKSAP*PLSFSL
Trigger: TAGAGAAAATGAAAGAGGTCAAGGAGCAGATTTCAA...CAAGGAGCAGATTTCAAATGAGTGAATGAGAGCCTCTTCATATTGCCTGGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR TCA 90 bp ATGGAATGCATAAGAACTAAGATCTTGAGATGTTATTTGAGGGCAGCCTTGCTTCCTCTTCTTCACTTCTaGCTGATGGAATGCATAAGA +
Preference number: 4 (lower is better)
Translates to: MECIRTKILRCYLRAALLPLLHF*LMECIR
Trigger: TCTTATGCATTCCATCAGTCAGAAGTGAAGAAGAGG...AAGCAAGGCTGCCCTCAAATAACATCTCAAGATCTTAGTTCTTATGCATTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CCA 90 bp ATGGAATGCATAAGAACTAAGATCTTGAGATGTTATTTGAGGGCAGCCTTGCTTATACAAGTGATTTCCTaGTCCCCAATCCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: MECIRTKILRCYLRAALLIQVIS*SPIQIL
Trigger: GAGAATCTGGATTGGGGACCAGGAAATCACTTGTAT...AAGCAAGGCTGCCCTCAAATAACATCTCAAGATCTTAGTTCTTATGCATTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS TCA 90 bp CCTGGCCTAAGGGTGGGTGAAATATGGAGGCCTCCTACCATTGCTTaGCGGAGGGCCTTGAAGAGCCTGAGGCTTACCGTTAGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: PGLRVGEIWRPPTIA*RRALKSLRLTVRRP
Trigger: GGGCCTCCTAACGGTAAGCCTCAGGCTCTTCAAGGCCCTCCGTCAAGCAATGGTAGGAGGCCTCCATATTTCACCCACCCTTAGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463993.1
CDS-3UTR CAA 90 bp GACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCTGCAGATGGGAAGCCTTGCGGACAACTTaGGGAGCCTTGCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: DRSPKFVCWGGRWLCRWEALRTT*GALQLL
Trigger: CAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGC...TTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CAA 90 bp TGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAACTGGAGCGGTCAGCCTaGCGGACAACTTTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: WVWSIIAPLTTAVATWLQLERSA*RTTLGA
Trigger: GGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCAG...TTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp TGTCACCATCAAGCAGATATCTACCCCAGCCCATGGCTGGCTGCATTGGTCTCCCTGGAGCGGTCAGCCTaGCGGACAACTTTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: CHHQADIYPSPWLAALVSLERSA*RTTLGA
Trigger: GGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCAG...GGAGACCAATGCAGCCAGCCATGGGCTGGGGTAGATATCTGCTTGATGGTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CAA 90 bp GCTCATTCCTTCGACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCGGGAACCTGGTGTGGTaGTCTCAGGACCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: AHSFDRSPKFVCWGGRWLGNLVW*SQDLLP
Trigger: AGGAAGGAGGTCCTGAGACAACCACACCAGGTTCCC...GAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGAAGGAATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CAA 90 bp TCCTTCGACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCTGCAGAACAGGAGCCCGAAGTTaGTGTGCTGGGGAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: SFDRSPKFVCWGGRWLCRTGARS*CAGEVG
Trigger: ACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGT...TCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CAA 90 bp TGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAACAGCCCGTGTCCTCTTaGGTCAGGCAGGACATAGTG +
Preference number: 5 (lower is better)
Translates to: WVWSIIAPLTTAVATWLQQPVSS*VRQDIV
Trigger: CACTATGTCCTGCCTGACCAAAGAGGACACGGGCTG...TTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp TCGACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCTGCAGATGGGTTGGCCAGGGTTCCTTaGTCGTCAGTTACAATCAGC +
Preference number: 5 (lower is better)
Translates to: STGARSLCAGEVGGSADGLARVP*SSVTIS
Trigger: GCTGATTGTAACTGACGACAAAGGAACCCTGGCCAA...CCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CAA 90 bp TGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAGCCTTGCGGACAACTTaGGGAGCCTTGCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: WVWSIIAPLTTAVATWLQALRTT*GALQLL
Trigger: CAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGC...TTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp ACCGCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCCTGGAGCGGTCAGCCTaGCGGACAACTTTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: TAVATWLQMIVVKDRGSFLERSA*RTTLGA
Trigger: GGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCAG...GAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp GCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCCAGACCAAAAGTCATaGGCCAGGGTTCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: AWVWSIIAPLTTAVATWLPDQKS*ARVPLS
Trigger: CGACAAAGGAACCCTGGCCAATGACTTTTGGTCTGG...CAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS GCA 90 bp TGGACGTCCTGGAGCGGTCAGCCTTGCGGACAACTTTGGGAGCCTTaGAGCTTCTGGTTTTGTTGCCTGATAGGTCTTTCCCAGACCAAA +
Preference number: 5 (lower is better)
Translates to: WTSWSGQPCGQLWEP*SFWFCCLIGLSQTK
Trigger: TTTGGTCTGGGAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCAGGACGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS CCA 90 bp ACAATCAGCTCTGTAAAATCCATGTCATCCCTGGCAAAGTCCCGCTaGATGCCACACCAGTACCAGCCCGTGTCCTCTTTGGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TISSVKSMSSLAKSR*MPHQYQPVSSLVRQ
Trigger: CTGCCTGACCAAAGAGGACACGGGCTGGTACTGGTGTGGCATCCAGCGGGACTTTGCCAGGGATGACATGGATTTTACAGAGCTGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000463993.1
ENST00000472933.2
CDS-3UTR CAA 90 bp GTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAATGATCAGCCCGTGTCCTCTTaGGTCAGGCAGGACATAGTG +
Preference number: 5 (lower is better)
Translates to: VVYHSSSDYRRCYLAANDQPVSS*VRQDIV
Trigger: CACTATGTCCTGCCTGACCAAAGAGGACACGGGCTG...ATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp GCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGTTGGCCAGGGTTCCTTaGTCGTCAGTTACAATCAGC +
Preference number: 5 (lower is better)
Translates to: AWVWSIIAPLTTAVATWLLARVP*SSVTIS
Trigger: GCTGATTGTAACTGACGACAAAGGAACCCTGGCCAA...CAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp AGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCTGCAGATGGGAACCTGGTCAGCTTCTGGTTTTGTaGCCTGATAGGTCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: SPKFVCWGGRWLCRWEPGQLLVL*PDRSFP
Trigger: TGGGAAAGACCTATCAGGCAACAAAACCAGAAGCTG...ACCAGGTTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CAA 90 bp ACCGCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCGCCTTGCGGACAACTTaGGGAGCCTTGCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: TAVATWLQMIVVKDRGSFALRTT*GALQLL
Trigger: CAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGC...GAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp GAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCACTGGAGCGGTCAGCCTaGCGGACAACTTTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: ESVSEVWASCHGDYSVVALERSA*RTTLGA
Trigger: GGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCAG...TGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS CCA 90 bp TGGAGCGGTCAGCCTTGCGGACAACTTTGGGAGCCTTGCAGCTTCTaGTTTTGTTGCCTGATAGGTCTTTCCCAGACCAAAAGTCATTGG +
Preference number: 5 (lower is better)
Translates to: WSGQPCGQLWEPCSF*FCCLIGLSQTKSHW
Trigger: CCAATGACTTTTGGTCTGGGAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS-3UTR CAA 90 bp AGACTCTTCTATACCTGCTTACCCAGCGGTCCCAGAAGCTCATTCCTTCGACAGCCAGACCAAAAGTCATaGGCCAGGGTTCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: RLFYTCLPSGPRSSFLRQPDQKS*ARVPLS
Trigger: CGACAAAGGAACCCTGGCCAATGACTTTTGGTCTGG...CTGTCGAAGGAATGAGCTTCTGGGACCGCTGGGTAAGCAGGTATAGAAGAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CAA 90 bp GCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGTTGCAGCTTCTGGTTTaGTTGCCTGATAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: AWVWSIIAPLTTAVATWLLQLLV*LPDRSF
Trigger: GAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAA...CAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS TCA 90 bp ATAAAGCAACTCTGGAGAAGTCCTTTTCCCTGGCCTAAGGGTGGGTaGAATATGGAGGCCTCCTACCATTGCTTGACGGAGGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: IKQLWRSPFPWPKGG*NMEASYHCLTEGLE
Trigger: TTCAAGGCCCTCCGTCAAGCAATGGTAGGAGGCCTCCATATTTCACCCACCCTTAGGCCAGGGAAAAGGACTTCTCCAGAGTTGCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463993.1
CDS-3UTR CAA 90 bp CATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAAATCTGACGGTAAGCTaGACCCGCAAGTATCGGTCC +
Preference number: 5 (lower is better)
Translates to: HSSSDYRRCYLAANDCCQNLTVS*TRKYRS
Trigger: GGACCGATACTTGCGGGTCAAGCTTACCGTCAGATT...TTGACAACAATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369716.9
CDS-3UTR CAA 90 bp GATCAGAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGCAGCCCGTGTCCTCTTaGGTCAGGCAGGACATAGTG +
Preference number: 5 (lower is better)
Translates to: DQNQSLRCGPVVMVIILLQPVSS*VRQDIV
Trigger: CACTATGTCCTGCCTGACCAAAGAGGACACGGGCTG...CAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp GGTCTCCAGGTGACCAGGCAATATGAAGAGGCTCTCATTCACTCATTTGAAATCCAGCCCGTGTCCTCTTaGGTCAGGCAGGACATAGTG +
Preference number: 5 (lower is better)
Translates to: GLQVTRQYEEALIHSFEIQPVSS*VRQDIV
Trigger: CACTATGTCCTGCCTGACCAAAGAGGACACGGGCTG...GATTTCAAATGAGTGAATGAGAGCCTCTTCATATTGCCTGGTCACCTGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CAA 90 bp TGGGTGTGGTCTATCATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAATTGCAGCTTCTGGTTTaGTTGCCTGATAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: WVWSIIAPLTTAVATWLQLQLLV*LPDRSF
Trigger: GAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAA...TTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATGATAGACCACACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp GTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTGCCTTGCGGACAACTTaGGGAGCCTTGCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: VSEVWASCHGDYSVVASLALRTT*GALQLL
Trigger: CAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGC...AAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp CATAGCTCCTCTGACTACCGCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAATATTTGAGGGCAGCCTaGCTTGGGTGTGGTCTATCA +
Preference number: 5 (lower is better)
Translates to: HSSSDYRRCYLAANDCCQYLRAA*LGCGLS
Trigger: TGATAGACCACACCCAAGCAAGGCTGCCCTCAAATA...TTGACAACAATCATTTGCAGCCAGGTAGCAACGGCGGTAGTCAGAGGAGCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp GACAGGAGCCCGAAGTTTGTGTGCTGGGGAGGTAGGTGGCTCTGCAGATGGGAATTTGAAATCTGCTCCTaGACCTCTTTCATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: DRSPKFVCWGGRWLCRWEFEICS*TSFIFS
Trigger: AGAGAAAATGAAAGAGGTCAAGGAGCAGATTTCAAA...TTCCCATCTGCAGAGCCACCTACCTCCCCAGCACACAAACTTCGGGCTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CAA 90 bp GATCAGAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGCCAGACCAAAAGTCATaGGCCAGGGTTCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: DQNQSLRCGPVVMVIILLPDQKS*ARVPLS
Trigger: CGACAAAGGAACCCTGGCCAATGACTTTTGGTCTGG...CAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp GTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTCCAGACCAAAAGTCATaGGCCAGGGTTCCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: VSEVWASCHGDYSVVASLPDQKS*ARVPLS
Trigger: CGACAAAGGAACCCTGGCCAATGACTTTTGGTCTGG...AAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp TTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGACTACCCAGCTTCTGGTTTTGTaGCCTGATAGGTCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: LFEGSLAWVWSIIAPLTTQLLVL*PDRSFP
Trigger: TGGGAAAGACCTATCAGGCAACAAAACCAGAAGCTG...GGTAGTCAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp ACCGCCGTTGCTACCTGGCTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAAGGGCTTCAAAGTGTaGCCTACCCTTCTATTCCTT +
Preference number: 5 (lower is better)
Translates to: TAVATWLQMIVVKDRGSFKGFKV*PTLLFL
Trigger: AAGGAATAGAAGGGTAGGCAACACTTTGAAGCCCTT...GAAGGACCCTCTATCCTTGACAACAATCATTTGCAGCCAGGTAGCAACGGCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp GATCAGAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTTGGCCAGGGTTCCTTaGTCGTCAGTTACAATCAGC +
Preference number: 5 (lower is better)
Translates to: DQNQSLRCGPVVMVIILLLARVP*SSVTIS
Trigger: GCTGATTGTAACTGACGACAAAGGAACCCTGGCCAA...CAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTCTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp TCAGGACCTCCTTCCTTCCTGACCTACACATGTATCCACTTAAGAAAGCTCCAGACAACTTTGGGAGCCTaGCAGCTTCTGGTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: SGPPSFLTYTCIHLRKLQTTLGA*QLLVLL
Trigger: CAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGT...CTGGAGCTTTCTTAAGTGGATACATGTGTAGGTCAGGAAGGAAGGAGGTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CAA 90 bp GAGATGTTATTTGAGGGCAGCCTTGCTTGGGTGTGGTCTATCATAGCTCCTCTGAAGGGCTTCAAAGTGTaGCCTACCCTTCTATTCCTT +
Preference number: 5 (lower is better)
Translates to: EMLFEGSLAWVWSIIAPLKGFKV*PTLLFL
Trigger: AAGGAATAGAAGGGTAGGCAACACTTTGAAGCCCTT...CAGAGGAGCTATGATAGACCACACCCAAGCAAGGCTGCCCTCAAATAACATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp GTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTATTTGAGGGCAGCCTaGCTTGGGTGTGGTCTATCA +
Preference number: 5 (lower is better)
Translates to: VSEVWASCHGDYSVVASLYLRAA*LGCGLS
Trigger: TGATAGACCACACCCAAGCAAGGCTGCCCTCAAATA...AAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp GAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCACAGCTTCTGGTTTTGTaGCCTGATAGGTCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: ESVSEVWASCHGDYSVVAQLLVL*PDRSFP
Trigger: TGGGAAAGACCTATCAGGCAACAAAACCAGAAGCTG...TGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp GTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTACAACTTTGGGAGCCTaGCAGCTTCTGGTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: VSEVWASCHGDYSVVASLTTLGA*QLLVLL
Trigger: CAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGT...AAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp GAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCAACAACTTTGGGAGCCTaGCAGCTTCTGGTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: ESVSEVWASCHGDYSVVATTLGA*QLLVLL
Trigger: CAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGT...TGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp GAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTATGAATTGGCCAGGGTTCCTTaGTCGTCAGTTACAATCAGC +
Preference number: 5 (lower is better)
Translates to: EVWASCHGDYSVVASLYELARVP*SSVTIS
Trigger: GCTGATTGTAACTGACGACAAAGGAACCCTGGCCAA...TTCATAAAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp GAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATTGCAGCTTCTGGTTTaGTTGCCTGATAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: ESVSEVWASCHGDYSVVALQLLV*LPDRSF
Trigger: GAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAA...TGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp CTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAATTCCTGGGAGATCAACAACTTTGGGAGCCTaGCAGCTTCTGGTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: LQMIVVKDRGSFRIPGRSTTLGA*QLLVLL
Trigger: CAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGT...TGATCTCCCAGGAATTCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp GAATCAGTCTCTGAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCAAAGGGCTTCAAAGTGTaGCCTACCCTTCTATTCCTT +
Preference number: 5 (lower is better)
Translates to: ESVSEVWASCHGDYSVVAKGFKV*PTLLFL
Trigger: AAGGAATAGAAGGGTAGGCAACACTTTGAAGCCCTT...TGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTCAGAGACTGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp CTGCAAATGATTGTTGTCAAGGATAGAGGGTCCTTCAGAATTCCTGGGAGATCAATCTTGAGATGTTATTaGAGGGCAGCCTTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: LQMIVVKDRGSFRIPGRSILRCY*RAALLG
Trigger: CCCAAGCAAGGCTGCCCTCAAATAACATCTCAAGAT...TGATCTCCCAGGAATTCTGAAGGACCCTCTATCCTTGACAACAATCATTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp GAGGTGTGGGCCAGTTGTCATGGTGATTATTCTGTTGTAGCATCACTTTATGAACAGCTTCTGGTTTTGTaGCCTGATAGGTCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: EVWASCHGDYSVVASLYEQLLVL*PDRSFP
Trigger: TGGGAAAGACCTATCAGGCAACAAAACCAGAAGCTG...TTCATAAAGTGATGCTACAACAGAATAATCACCATGACAACTGGCCCACACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000443498.5
CDS-3UTR CAA 90 bp AGGCAATATGAAGAGGCTCTCATTCACTCATTTGAAATCTGCTCCTTGACCTCTTTGCAGCTTCTGGTTTaGTTGCCTGATAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: RQYEEALIHSFEICSLTSLQLLV*LPDRSF
Trigger: GAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAA...AGAGGTCAAGGAGCAGATTTCAAATGAGTGAATGAGAGCCTCTTCATATTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS-3UTR CAA 90 bp CTGATGGAATGCATAAGAACTAAGATCTTGAGATGTTATTTGAGGGCAGCCTTGATCTTGAGATGTTATTaGAGGGCAGCCTTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: LMECIRTKILRCYLRAALILRCY*RAALLG
Trigger: CCCAAGCAAGGCTGCCCTCAAATAACATCTCAAGAT...CAAGGCTGCCCTCAAATAACATCTCAAGATCTTAGTTCTTATGCATTCCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369716.9
ENST00000369717.8
CDS-3UTR CAA 90 bp AGGCAATATGAAGAGGCTCTCATTCACTCATTTGAAATCTGCTCCTTGACCTCTACTTCTCGTGATGCCTaGTCACCATCAAGCAGATAT +
Preference number: 5 (lower is better)
Translates to: RQYEEALIHSFEICSLTSTSRDA*SPSSRY
Trigger: ATATCTGCTTGATGGTGACAAGGCATCACGAGAAGT...AGAGGTCAAGGAGCAGATTTCAAATGAGTGAATGAGAGCCTCTTCATATTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472933.2
CDS CAA 90 bp GCAAAGTCCCGCTGGATGCCACACCAGTACCAGCCCGTGTCCTCTTaGGTCAGGCAGGACATAGTGACAATGAGCTGGTTCCCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: AKSRWMPHQYQPVSS*VRQDIVTMSWFPVS
Trigger: GGACACAGGGAACCAGCTCATTGTCACTATGTCCTGCCTGACCAAAGAGGACACGGGCTGGTACTGGTGTGGCATCCAGCGGGACTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000463993.1
CDS GCA 72 bp TGGCCAATGACAGAGCAGTGCTGTTGTTGGGCATCTTaGCTTCCCAGGGGAACCTCCACAGGGACAGGTGAG +
Preference number: 6 (lower is better)
Translates to: WPMTEQCCCWAS*LPRGTSTGTGE
Trigger: CTCACCTGTCCCTGTGGAGGTTCCCCTGGGAAGGCAAGATGCCCAACAACAGCACTGCTCTGTCATTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369716.9
CDS CAA 72 bp CGCTGGATGCCACACCAGTACCAGCCCGTGTCCTCTTaGGTCAGGCAGGACATAGTGACAATGAGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: RWMPHQYQPVSS*VRQDIVTMSWF
Trigger: GAACCAGCTCATTGTCACTATGTCCTGCCTGACCAAAGAGGACACGGGCTGGTACTGGTGTGGCATCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000463993.1
CDS TCA 72 bp AGGGTGGGTGAAATATGGAGGCCTCCTACCATTGCTTaGCGGAGGGCCTTGAAGAGCCTGAGGCTTACCGTT +
Preference number: 6 (lower is better)
Translates to: RVGEIWRPPTIA*RRALKSLRLTV
Trigger: AACGGTAAGCCTCAGGCTCTTCAAGGCCCTCCGTCAAGCAATGGTAGGAGGCCTCCATATTTCACCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463993.1
CDS CCA 72 bp TGGACGTCCTGGAGCGGTCAGCCTTGCGGACAACTTTaGGAGCCTTGCAGCTTCTGGTTTTGTTGCCTGATA +
Preference number: 6 (lower is better)
Translates to: WTSWSGQPCGQL*EPCSFWFCCLI
Trigger: TATCAGGCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCAGGACGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS CAA 72 bp ATGGACGTCCTGGAGCGGTCAGCCTTGCGGACAACTTaGGGAGCCTTGCAGCTTCTGGTTTTGTTGCCTGAT +
Preference number: 6 (lower is better)
Translates to: MDVLERSALRTT*GALQLLVLLPD
Trigger: ATCAGGCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCAGGACGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS CAA 90 bp GTCTGCAGGCTGGGGTTCAGCTTGACCACGCAGATGACCAGCACGTaGCCCACTATGGCGCAGAGTCCAATGAAAATTTCCATGGTGATG +
Preference number: 6 (lower is better)
Translates to: VCRLGFSLTTQMTST*PTMAQSPMKISMVM
Trigger: CATCACCATGGAAATTTTCATTGGACTCTGCGCCATAGTGGGCAACGTGCTGGTCATCTGCGTGGTCAAGCTGAACCCCAGCCTGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369716.9
CDS CAA 90 bp ATGGACGTCCTGGAGCGGTCAGCCTTGCGGACAACTTTGGGAGCCTaGCAGCTTCTGGTTTTGTTGCCTGATAGGTCTTTCCCAGACCAA +
Preference number: 6 (lower is better)
Translates to: MDVLERSALRTTLGA*QLLVLLPDRSFPDQ
Trigger: TTGGTCTGGGAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCAGGACGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS TCA 72 bp CTCTGGAGAAGTCCTTTTCCCTGGCCTAAGGGTGGGTaGAATATGGAGGCCTCCTACCATTGCTTGACGGAG +
Preference number: 6 (lower is better)
Translates to: LWRSPFPWPKGG*NMEASYHCLTE
Trigger: CTCCGTCAAGCAATGGTAGGAGGCCTCCATATTTCACCCACCCTTAGGCCAGGGAAAAGGACTTCTCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463993.1
CDS GCA 72 bp TGGAGCGGTCAGCCTTGCGGACAACTTTGGGAGCCTTaGAGCTTCTGGTTTTGTTGCCTGATAGGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: WSGQPCGQLWEP*SFWFCCLIGLS
Trigger: GGAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS CCA 72 bp TCTGTAAAATCCATGTCATCCCTGGCAAAGTCCCGCTaGATGCCACACCAGTACCAGCCCGTGTCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: SVKSMSSLAKSR*MPHQYQPVSSL
Trigger: CAAAGAGGACACGGGCTGGTACTGGTGTGGCATCCAGCGGGACTTTGCCAGGGATGACATGGATTTTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000463993.1
ENST00000472933.2
CDS CAA 72 bp CTGGGGTTCAGCTTGACCACGCAGATGACCAGCACGTaGCCCACTATGGCGCAGAGTCCAATGAAAATTTCC +
Preference number: 6 (lower is better)
Translates to: LGFSLTTQMTST*PTMAQSPMKIS
Trigger: GGAAATTTTCATTGGACTCTGCGCCATAGTGGGCAACGTGCTGGTCATCTGCGTGGTCAAGCTGAACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369716.9
CDS CAA 72 bp CTGGAGCGGTCAGCCTTGCGGACAACTTTGGGAGCCTaGCAGCTTCTGGTTTTGTTGCCTGATAGGTCTTTC +
Preference number: 6 (lower is better)
Translates to: LERSALRTTLGA*QLLVLLPDRSF
Trigger: GAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS CAA 90 bp ATGATGAGAATGGACGTCCTGGAGCGGTCAGCCTTGCGGACAACTTaGGGAGCCTTGCAGCTTCTGGTTTTGTTGCCTGATAGGTCTTTC +
Preference number: 6 (lower is better)
Translates to: MMRMDVLERSALRTT*GALQLLVLLPDRSF
Trigger: GAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCAGGACGTCCATTCTCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS CCA 72 bp CAGCCTTGCGGACAACTTTGGGAGCCTTGCAGCTTCTaGTTTTGTTGCCTGATAGGTCTTTCCCAGACCAAA +
Preference number: 6 (lower is better)
Translates to: QPCGQLWEPCSF*FCCLIGLSQTK
Trigger: TTTGGTCTGGGAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS CAA 90 bp ATTCCCAACTTGCTCATTCCTACCCTTTTCTGGTGGGGTGATCTCTaGGAAACCCTTCTCCTTAGAAAGGGCTCATCACAGGTGGGTCAC +
Preference number: 6 (lower is better)
Translates to: IPNLLIPTLFWWGDL*ETLLLRKGSSQVGH
Trigger: GTGACCCACCTGTGATGAGCCCTTTCTAAGGAGAAGGGTTTCCAAGAGATCACCCCACCAGAAAAGGGTAGGAATGAGCAAGTTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369716.9
CDS CAA 72 bp CAGATGGCAGAAGCCGTGTCCAGCACAAAGCTTCTCTaGACCTTTTCATCCATGACCATGGCATCACCTTCA +
Preference number: 6 (lower is better)
Translates to: QMAEAVSSTKLL*TFSSMTMASPS
Trigger: TGAAGGTGATGCCATGGTCATGGATGAAAAGGTCAAGAGAAGCTTTGTGCTGGACACGGCTTCTGCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463993.1
CDS CCA 72 bp TGCAGTAGTCACGGAAATAGCCTCGGCACCAGTATTTaGGGTGATTCTTGTAGTGGGCATTGTAGTTGCAGA +
Preference number: 6 (lower is better)
Translates to: CSSHGNSLGTSI*GDSCSGHCSCR
Trigger: TCTGCAACTACAATGCCCACTACAAGAATCACCCCAAATACTGGTGCCGAGGCTATTTCCGTGACTACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000463993.1
CDS CCA 72 bp CTTCAGTCACATCTGTTCAGTAGGAGCCATTTCCTTTaGAGTCAGGACACGCGAGAAGGGCTTCAAAGTGTT +
Preference number: 6 (lower is better)
Translates to: LQSHLFSRSHFL*SQDTREGLQSV
Trigger: AACACTTTGAAGCCCTTCTCGCGTGTCCTGACTCCAAAGGAAATGGCTCCTACTGAACAGATGTGACTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
CDS CAA 72 bp TTGCTCATTCCTACCCTTTTCTGGTGGGGTGATCTCTaGGAAACCCTTCTCCTTAGAAAGGGCTCATCACAG +
Preference number: 6 (lower is better)
Translates to: LLIPTLFWWGDL*ETLLLRKGSSQ
Trigger: CTGTGATGAGCCCTTTCTAAGGAGAAGGGTTTCCAAGAGATCACCCCACCAGAAAAGGGTAGGAATGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369716.9
CDS CAA 72 bp CGGACAACTTTGGGAGCCTTGCAGCTTCTGGTTTTGTaGCCTGATAGGTCTTTCCCAGACCAAAAGTCATTG +
Preference number: 6 (lower is better)
Translates to: RTTLGALQLLVL*PDRSFPDQKSL
Trigger: CAATGACTTTTGGTCTGGGAAAGACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS CAA 90 bp CCTGATAGGTCTTTCCCAGACCAAAAGTCATTGGCCAGGGTTCCTTaGTCGTCAGTTACAATCAGCTCTGTAAAATCCATGTCATCCCTG +
Preference number: 6 (lower is better)
Translates to: PDRSFPDQKSLARVP*SSVTISSVKSMSSL
Trigger: CAGGGATGACATGGATTTTACAGAGCTGATTGTAACTGACGACAAAGGAACCCTGGCCAATGACTTTTGGTCTGGGAAAGACCTATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000463993.1
ENST00000472933.2
CDS CCA 72 bp TGTTGCCTGATAGGTCTTTCCCAGACCAAAAGTCATTaGCCAGGGTTCCTTTGTCGTCAGTTACAATCAGCT +
Preference number: 6 (lower is better)
Translates to: CCLIGLSQTKSH*PGFLCRQLQSA
Trigger: AGCTGATTGTAACTGACGACAAAGGAACCCTGGCCAATGACTTTTGGTCTGGGAAAGACCTATCAGGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS CAA 72 bp TTGTTGCCTGATAGGTCTTTCCCAGACCAAAAGTCATaGGCCAGGGTTCCTTTGTCGTCAGTTACAATCAGC +
Preference number: 6 (lower is better)
Translates to: LLPDRSFPDQKS*ARVPLSSVTIS
Trigger: GCTGATTGTAACTGACGACAAAGGAACCCTGGCCAATGACTTTTGGTCTGGGAAAGACCTATCAGGCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000472933.2
CDS CAA 72 bp TCTTTCCCAGACCAAAAGTCATTGGCCAGGGTTCCTTaGTCGTCAGTTACAATCAGCTCTGTAAAATCCATG +
Preference number: 6 (lower is better)
Translates to: SFPDQKSLARVP*SSVTISSVKSM
Trigger: CATGGATTTTACAGAGCTGATTGTAACTGACGACAAAGGAACCCTGGCCAATGACTTTTGGTCTGGGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369716.9
ENST00000369717.8
ENST00000442484.2
ENST00000443498.5
ENST00000463993.1
ENST00000472933.2