Pregenerated sensors for TMIGD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000182271Ensembl transcript IDs: ENST00000328886.5, ENST00000538566.6
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGAAACGGACACGGACTaGTCCCTCCCCAGCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: WDYINCGGPDAKLSLYSMETDTD*SLPSLQ Trigger: CTGCAGGCTGGGGAGGGATCAGTCCGTGTCCGTTTC...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | ATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTTTGTACCACATCATTTaGGCCTGGGGGTTGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: IVEVLMQNSLCIRWHLSFLYHII*AWGLAF Trigger: GAAAGCCAACCCCCAGGCTCAAATGATGTGGTACAA...AAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGTCTACTCTTGAGCTCTaGGAAGCTGACTTCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: WDYINCGGPDAKLSLYSMSTLEL*EADFLG Trigger: GCCAAGGAAGTCAGCTTCTCAGAGCTCAAGAGTAGA...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR GCA 90 bp | ATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTAGCACATATCAGAGATaGTTGGGAGCCAGGTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: IVEVLMQNSLCIRWHLSFSTYQR*LGARCS Trigger: ACTACACCTGGCTCCCAAGCATCTCTGATATGTGCT...AAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CCA 90 bp | ATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCATATCAGAGATGCTTaGGAGCCAGGTGTAGTATCC | + |
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Preference number: 4 (lower is better) Translates to: IVEVLMQNSLCIRWHLSFHIRDA*EPGVVS Trigger: GGATACTACACCTGGCTCCCAAGCATCTCTGATATG...AAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTTCTACTCTTGAGCTCTaGGAAGCTGACTTCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: YINCGGPDAKLSLYSMASSTLEL*EADFLG Trigger: GCCAAGGAAGTCAGCTTCTCAGAGCTCAAGAGTAGA...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | ATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGAGCTGTTTTTGTACCACATCATTTaGGCCTGGGGGTTGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MQNSLCIRWHLSFLIELFLYHII*AWGLAF Trigger: GAAAGCCAACCCCCAGGCTCAAATGATGTGGTACAA...AAACAGCTCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | ATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTGCTTCTCGACTTTGGTaGTTGACAGCTGAAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: IVEVLMQNSLCIRWHLSFASRLW*LTAEKT Trigger: AGTCTTTTCAGCTGTCAATCACCAAAGTCGAGAAGC...AAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CCA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGCATATCAGAGATGCTTaGGAGCCAGGTGTAGTATCC | + |
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Preference number: 4 (lower is better) Translates to: WDYINCGGPDAKLSLYSMHIRDA*EPGVVS Trigger: GGATACTACACCTGGCTCCCAAGCATCTCTGATATG...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CCA 90 bp | ATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCCTTCCTCAACTGTTTaGAAGTCGTTTCCACTTAGG | + |
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Preference number: 4 (lower is better) Translates to: IVEVLMQNSLCIRWHLSFPSSTV*KSFPLR Trigger: CCTAAGTGGAAACGACTTCCAAACAGTTGAGGAAGG...AAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CCA 90 bp | GGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGACCTTCCTCAACTGTTTaGAAGTCGTTTCCACTTAGG | + |
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Preference number: 4 (lower is better) Translates to: GPDAKLSLYSMASQLSHRPSSTV*KSFPLR Trigger: CCTAAGTGGAAACGACTTCCAAACAGTTGAGGAAGG...TCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | ATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTTCTCTGGTGTGGTTTTaGACAGCACATATCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: IVEVLMQNSLCIRWHLSFSLVWF*TAHIRD Trigger: ATCTCTGATATGTGCTGTTCAAAACCACACCAGAGA...AAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | GTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGAGTCTCTGGTGTGGTTTTaGACAGCACATATCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: VLMQNSLCIRWHLSFLIESLVWF*TAHIRD Trigger: ATCTCTGATATGTGCTGTTCAAAACCACACCAGAGA...CTCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | GGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGATTGGTGATTGACAGCTaGAAAGACTCACTTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GPDAKLSLYSMASQLSHRLVIDS*KDSLVC Trigger: ACAGACAAGTGAGTCTTTTCAGCTGTCAATCACCAA...TCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGCTCGACTTTGGTGATTaGCAGCTGAAAAGACTCACT | + |
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Preference number: 4 (lower is better) Translates to: WDYINCGGPDAKLSLYSMLDFGD*QLKRLT Trigger: AGTGAGTCTTTTCAGCTGTCAATCACCAAAGTCGAG...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGAGAGCTGTTTCACTGTaGGGGTCTTTATCCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: WDYINCGGPDAKLSLYSMRAVSL*GSLSFM Trigger: CATGAAGGATAAAGACCCTCACAGTGAAACAGCTCT...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | GTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGAGAAATTGTGGAGGTCCTaGTGCAAAACTCTCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLMQNSLCIRWHLSFLIEKLWRS*CKTLSV Trigger: TACAGAGAGAGTTTTGCATCAGGACCTCCACAATTT...CTCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGCTTTGCACCAATTTGTaGGACCCAAGTATCTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: WDYINCGGPDAKLSLYSMLCTNL*DPSISY Trigger: GTAGGAGATACTTGGGTCTCACAAATTGGTGCAAAG...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR GCA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTAGCACATATCAGAGATaGTTGGGAGCCAGGTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: YINCGGPDAKLSLYSMASSTYQR*LGARCS Trigger: ACTACACCTGGCTCCCAAGCATCTCTGATATGTGCT...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CCA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTTTTGAGCCTGGGGGTTaGCTTTCACATTGCAAACCA | + |
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Preference number: 4 (lower is better) Translates to: YINCGGPDAKLSLYSMASFEPGG*LSHCKP Trigger: TGGTTTGCAATGTGAAAGCCAACCCCCAGGCTCAAA...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | ATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGAGCTGTTTCTCGACTTTGGTGATTaGCAGCTGAAAAGACTCACT | + |
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Preference number: 4 (lower is better) Translates to: MQNSLCIRWHLSFLIELFLDFGD*QLKRLT Trigger: AGTGAGTCTTTTCAGCTGTCAATCACCAAAGTCGAG...AAACAGCTCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTGCTTCTCGACTTTGGTaGTTGACAGCTGAAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: YINCGGPDAKLSLYSMASASRLW*LTAEKT Trigger: AGTCTTTTCAGCTGTCAATCACCAAAGTCGAGAAGC...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | ATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCCGTTTTCAGAGATaGCTTTGCAATACAACTGTA | + |
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Preference number: 4 (lower is better) Translates to: IVEVLMQNSLCIRWHLSFLRFQR*LCNTTV Trigger: TACAGTTGTATTGCAAAGTCATCTCTGAAAACGGAG...AAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | ATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGAGCTGTTTAGAGCTGTTTCACTGTaGGGGTCTTTATCCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: MQNSLCIRWHLSFLIELFRAVSL*GSLSFM Trigger: CATGAAGGATAAAGACCCTCACAGTGAAACAGCTCT...AAACAGCTCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGAAATTGTGGAGGTCCTaGTGCAAAACTCTCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: WDYINCGGPDAKLSLYSMKLWRS*CKTLSV Trigger: TACAGAGAGAGTTTTGCATCAGGACCTCCACAATTT...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCTTTGCACCAATTTGTaGGACCCAAGTATCTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: YINCGGPDAKLSLYSMASLCTNL*DPSISY Trigger: GTAGGAGATACTTGGGTCTCACAAATTGGTGCAAAG...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTGCTTTAACAATCAGGTaGAAGTCCAAGCTCTCCGTT | + |
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Preference number: 4 (lower is better) Translates to: YINCGGPDAKLSLYSMASALTIR*KSKLSV Trigger: AACGGAGAGCTTGGACTTTCACCTGATTGTTAAAGC...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR CCA 90 bp | GGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGATCTCTCTGTATTCGATaGCATCTCAGCTTTCTCATA | + |
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Preference number: 4 (lower is better) Translates to: GPDAKLSLYSMASQLSHRSLCIR*HLSFLI Trigger: TATGAGAAAGCTGAGATGCCATCGAATACAGAGAGA...TCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTTTGGTGATTGACAGCTaGAAAGACTCACTTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: YINCGGPDAKLSLYSMASLVIDS*KDSLVC Trigger: ACAGACAAGTGAGTCTTTTCAGCTGTCAATCACCAA...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR TCA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTTCTTTAACAATCAGGTaGAAGTCCAAGCTCTCCGTT | + |
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Preference number: 4 (lower is better) Translates to: YINCGGPDAKLSLYSMASSLTIR*KSKLSV Trigger: AACGGAGAGCTTGGACTTTCACCTGATTGTTAAAGA...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328886.5 |
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| CDS-3UTR CCA 90 bp | ATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTAATAATGGGCTCTATTaGTACACCCACAGTTTTATC | + |
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Preference number: 4 (lower is better) Translates to: IVEVLMQNSLCIRWHLSFNNGLY*YTHSFI Trigger: GATAAAACTGTGGGTGTACCAATAGAGCCCATTATT...AAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000328886.5 |
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| CDS-3UTR GCA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTGGTCTTTATCCTTCATaGAGAGCTTTAACAATCAGG | + |
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Preference number: 4 (lower is better) Translates to: YINCGGPDAKLSLYSMASGLYPS*RALTIR Trigger: CCTGATTGTTAAAGCTCTGCATGAAGGATAAAGACC...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR CCA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTTCTCTCTGTATTCGATaGCATCTCAGCTTTCTCATA | + |
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Preference number: 4 (lower is better) Translates to: YINCGGPDAKLSLYSMASSLCIR*HLSFLI Trigger: TATGAGAAAGCTGAGATGCCATCGAATACAGAGAGA...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR GCA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTAAAGATCACAACACATaGAGCAATAATGGGCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: YINCGGPDAKLSLYSMASKDHNT*SNNGLY Trigger: ATAGAGCCCATTATTGCTGCATGTGTTGTGATCTTT...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328886.5 |
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| CDS TCA 90 bp | CCCTCCTCTCGGTACCAGAGCAGTTCTTCCTCTCTGGTGTGGTTTTaGACAGCACATATCAGAGATGCTTGGGAGCCAGGTGTAGTATCC | + |
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Preference number: 5 (lower is better) Translates to: PSSRYQSSSSSLVWF*TAHIRDAWEPGVVS Trigger: GGATACTACACCTGGCTCCCAAGCATCTCTGATATGTGCTGTTCAAAACCACACCAGAGAGGAAGAACTGCTCTGGTACCGAGAGGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS CCA 90 bp | AATCCACTCTCCCCTCCTCTCGGTACCAGAGCAGTTCTTCCTCTCTaGTGTGGTTTTGAACAGCACATATCAGAGATGCTTGGGAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: NPLSPPLGTRAVLPL*CGFEQHISEMLGSQ Trigger: CTGGCTCCCAAGCATCTCTGATATGTGCTGTTCAAAACCACACCAGAGAGGAAGAACTGCTCTGGTACCGAGAGGAGGGGAGAGTGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS TCA 90 bp | AGAGGAGGAAAAGTAACATTCAGCACCACCGAAACGGACACGGACTaGTCCCTCCCCAGCCTGCAGGTAAAGCTGATTCCGTTGTCATTT | + |
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Preference number: 5 (lower is better) Translates to: RGGKVTFSTTETDTD*SLPSLQVKLIPLSF Trigger: AAATGACAACGGAATCAGCTTTACCTGCAGGCTGGGGAGGGATCAGTCCGTGTCCGTTTCGGTGGTGCTGAATGTTACTTTTCCTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS GCA 90 bp | GAGCCTGGGGGTTGGCTTTCACATTGCAAACCAACTTCACATTACTaGCTTCCTCAACTGTTTGGAAGTCGTTTCCACTTAGGAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: EPGGWLSHCKPTSHY*LPQLFGSRFHLGEE Trigger: CTCCTCTCCTAAGTGGAAACGACTTCCAAACAGTTGAGGAAGGCAGTAATGTGAAGTTGGTTTGCAATGTGAAAGCCAACCCCCAGGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | ATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTGAGAAGCTGACTTCCTaGGCCAACTGTTCCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: IVEVLMQNSLCIRWHLSFEKLTS*ANCSSA Trigger: GGCAGAGGAACAGTTGGCCAAGGAAGTCAGCTTCTC...AAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | GTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGAGGAGAAGCTGACTTCCTaGGCCAACTGTTCCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: VLMQNSLCIRWHLSFLIEEKLTS*ANCSSA Trigger: GGCAGAGGAACAGTTGGCCAAGGAAGTCAGCTTCTC...CTCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS TCA 90 bp | AATACAACTGTAGGTTCCGTTGTCAGGCTTCTCGACTTTGGTGATTaGCAGCTGAAAAGACTCACTTGTCTGTTGGATTTGGTGACGGCT | + |
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Preference number: 5 (lower is better) Translates to: NTTVGSVVRLLDFGD*QLKRLTCLLDLVTA Trigger: AGCCGTCACCAAATCCAACAGACAAGTGAGTCTTTTCAGCTGTCAATCACCAAAGTCGAGAAGCCTGACAACGGAACCTACAGTTGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS CCA 90 bp | CGAGGAGACTACTGTTTTTGTACCACATCATTTGAGCCTGGGGGTTaGCTTTCACATTGCAAACCAACTTCACATTACTGCCTTCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: RGDYCFCTTSFEPGG*LSHCKPTSHYCLPQ Trigger: TTGAGGAAGGCAGTAATGTGAAGTTGGTTTGCAATGTGAAAGCCAACCCCCAGGCTCAAATGATGTGGTACAAAAACAGTAGTCTCCTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | ATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTACATATCAGAGATGCTaGGGAGCCAGGTGTAGTATC | + |
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Preference number: 5 (lower is better) Translates to: IVEVLMQNSLCIRWHLSFTYQRC*GARCSI Trigger: GATACTACACCTGGCTCCCAAGCATCTCTGATATGT...AAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS TCA 90 bp | TTGCAATACAACTGTAGGTTCCGTTGTCAGGCTTCTCGACTTTGGTaGTTGACAGCTGAAAAGACTCACTTGTCTGTTGGATTTGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: LQYNCRFRCQASRLW*LTAEKTHLSVGFGD Trigger: GTCACCAAATCCAACAGACAAGTGAGTCTTTTCAGCTGTCAATCACCAAAGTCGAGAAGCCTGACAACGGAACCTACAGTTGTATTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS TCA 90 bp | AGCTTTAACAATCAGGTGAAAGTCCAAGCTCTCCGTTTTCAGAGATaGCTTTGCAATACAACTGTAGGTTCCGTTGTCAGGCTTCTCGAC | + |
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Preference number: 5 (lower is better) Translates to: SFNNQVKVQALRFQR*LCNTTVGSVVRLLD Trigger: GTCGAGAAGCCTGACAACGGAACCTACAGTTGTATTGCAAAGTCATCTCTGAAAACGGAGAGCTTGGACTTTCACCTGATTGTTAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS GCA 90 bp | CAGTTCTTCCTCTCTGGTGTGGTTTTGAACAGCACATATCAGAGATaGTTGGGAGCCAGGTGTAGTATCCAGGATATAGTTCTCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: QFFLSGVVLNSTYQR*LGARCSIQDIVLSF Trigger: AAAACTGAGAACTATATCCTGGATACTACACCTGGCTCCCAAGCATCTCTGATATGTGCTGTTCAAAACCACACCAGAGAGGAAGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGACATATCAGAGATGCTaGGGAGCCAGGTGTAGTATC | + |
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Preference number: 5 (lower is better) Translates to: WDYINCGGPDAKLSLYSMTYQRC*GARCSI Trigger: GATACTACACCTGGCTCCCAAGCATCTCTGATATGT...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | GGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGACTCTCTGGTGTGGTTTaGAACAGCACATATCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: GPDAKLSLYSMASQLSHRLSGVV*NSTYQR Trigger: TCTCTGATATGTGCTGTTCAAAACCACACCAGAGAG...TCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS TCA 90 bp | ATCTTTAACAATCAGGTGAAAGTCCAAGCTCTCCGTTTTCAGAGATaGCTTTGCAATACAACTGTAGGTTCCGTTGTCAGGCTTCTCGAC | + |
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Preference number: 5 (lower is better) Translates to: IFNNQVKVQALRFQR*LCNTTVGSVVRLLD Trigger: GTCGAGAAGCCTGACAACGGAACCTACAGTTGTATTGCAAAGTCATCTCTGAAAACGGAGAGCTTGGACTTTCACCTGATTGTTAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328886.5 |
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| CDS GCA 90 bp | TGTTTTTGTACCACATCATTTGAGCCTGGGGGTTGGCTTTCACATTaGAAACCAACTTCACATTACTGCCTTCCTCAACTGTTTGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: CFCTTSFEPGGWLSH*KPTSHYCLPQLFGS Trigger: ACTTCCAAACAGTTGAGGAAGGCAGTAATGTGAAGTTGGTTTGCAATGTGAAAGCCAACCCCCAGGCTCAAATGATGTGGTACAAAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGAACTCAGATCTACTCTaGAGCTCTGAGAAGCTGACT | + |
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Preference number: 5 (lower is better) Translates to: WDYINCGGPDAKLSLYSMNSDLL*SSEKLT Trigger: AGTCAGCTTCTCAGAGCTCAAGAGTAGATCTGAGTT...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | ATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCAGTTAAAACAGAACTaGTCATCTCACGTGGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: IVEVLMQNSLCIRWHLSFQLKQN*SSHVAE Trigger: TTCTGCCACGTGAGATGACAAGTTCTGTTTTAACTG...AAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGCTCTCTGGTGTGGTTTaGAACAGCACATATCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: WDYINCGGPDAKLSLYSMLSGVV*NSTYQR Trigger: TCTCTGATATGTGCTGTTCAAAACCACACCAGAGAG...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | GTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGAGGGGTTGGCTTTCACATaGCAAACCAACTTCACATTA | + |
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Preference number: 5 (lower is better) Translates to: VLMQNSLCIRWHLSFLIEGLAFT*QTNFTL Trigger: TAATGTGAAGTTGGTTTGCAATGTGAAAGCCAACCC...CTCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTTTTGTACCACATCATTaGAGCCTGGGGGTTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: YINCGGPDAKLSLYSMASFVPHH*SLGVGF Trigger: AAAGCCAACCCCCAGGCTCAAATGATGTGGTACAAA...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGAGACTCACTTGTCTGTaGGATTTGGTGACGGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: WDYINCGGPDAKLSLYSMRLTCL*DLVTAF Trigger: AAAAGCCGTCACCAAATCCAACAGACAAGTGAGTCT...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS CCA 90 bp | TTCACATTGCAAACCAACTTCACATTACTGCCTTCCTCAACTGTTTaGAAGTCGTTTCCACTTAGGAGAGGAGGAAAAGTAACATTCAGC | + |
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Preference number: 5 (lower is better) Translates to: FTLQTNFTLLPSSTV*KSFPLRRGGKVTFS Trigger: GCTGAATGTTACTTTTCCTCCTCTCCTAAGTGGAAACGACTTCCAAACAGTTGAGGAAGGCAGTAATGTGAAGTTGGTTTGCAATGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | ATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGAGCTGTTTAACTCAGATCTACTCTaGAGCTCTGAGAAGCTGACT | + |
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Preference number: 5 (lower is better) Translates to: MQNSLCIRWHLSFLIELFNSDLL*SSEKLT Trigger: AGTCAGCTTCTCAGAGCTCAAGAGTAGATCTGAGTT...AAACAGCTCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTAGACTCACTTGTCTGTaGGATTTGGTGACGGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: YINCGGPDAKLSLYSMASRLTCL*DLVTAF Trigger: AAAAGCCGTCACCAAATCCAACAGACAAGTGAGTCT...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGTAAAGCTGATTCCGTaGTCATTTTCACTGATGGAA | + |
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Preference number: 5 (lower is better) Translates to: WDYINCGGPDAKLSLYSMVKLIP*SFSLME Trigger: TTCCATCAGTGAAAATGACAACGGAATCAGCTTTAC...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTGGGTTGGCTTTCACATaGCAAACCAACTTCACATTA | + |
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Preference number: 5 (lower is better) Translates to: YINCGGPDAKLSLYSMASGLAFT*QTNFTL Trigger: TAATGTGAAGTTGGTTTGCAATGTGAAAGCCAACCC...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGAGCTGGAATTGATTTaGTTTCCAGATTTCAAATCC | + |
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Preference number: 5 (lower is better) Translates to: WDYINCGGPDAKLSLYSMELELI*FPDFKS Trigger: GGATTTGAAATCTGGAAACAAAATCAATTCCAGCTC...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGACAGAGCTGGAATaGATTTTGTTTCCAGATTTC | + |
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Preference number: 5 (lower is better) Translates to: YINCGGPDAKLSLYSMASQTELE*ILFPDF Trigger: GAAATCTGGAAACAAAATCAATTCCAGCTCTGTCTG...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | ATGCAAAACTCTCTCTGTATTCGATGGCATCTCAGCTTTCTCATAGAGCTGTTTCAGACAGAGCTGGAATaGATTTTGTTTCCAGATTTC | + |
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Preference number: 5 (lower is better) Translates to: MQNSLCIRWHLSFLIELFQTELE*ILFPDF Trigger: GAAATCTGGAAACAAAATCAATTCCAGCTCTGTCTG...AAACAGCTCTATGAGAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTGTAAAGCTGATTCCGTaGTCATTTTCACTGATGGAA | + |
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Preference number: 5 (lower is better) Translates to: YINCGGPDAKLSLYSMASVKLIP*SFSLME Trigger: TTCCATCAGTGAAAATGACAACGGAATCAGCTTTAC...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TGGGACTACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGTTTTCAGAGATGACTTaGCAATACAACTGTAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: WDYINCGGPDAKLSLYSMFSEMT*QYNCRF Trigger: GAACCTACAGTTGTATTGCAAAGTCATCTCTGAAAA...CATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTAGTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTGAGCTGGAATTGATTTaGTTTCCAGATTTCAAATCC | + |
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Preference number: 5 (lower is better) Translates to: YINCGGPDAKLSLYSMASELELI*FPDFKS Trigger: GGATTTGAAATCTGGAAACAAAATCAATTCCAGCTC...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS-3UTR CAA 90 bp | TACATAAATTGTGGAGGTCCTGATGCAAAACTCTCTCTGTATTCGATGGCATCTTTTTCAGAGATGACTTaGCAATACAACTGTAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: YINCGGPDAKLSLYSMASFSEMT*QYNCRF Trigger: GAACCTACAGTTGTATTGCAAAGTCATCTCTGAAAA...AGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCCACAATTTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS GCA 90 bp | TCACGTGGCAGAAATAAAATTACTAAGAGAAGAAATCTTCCCATTTaGATTATGACACTGCTCTTCCATGCCATCTTTAATGAGTTAAAC | + |
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Preference number: 5 (lower is better) Translates to: SRGRNKITKRRNLPI*IMTLLFHAIFNELN Trigger: GTTTAACTCATTAAAGATGGCATGGAAGAGCAGTGTCATAATGCAAATGGGAAGATTTCTTCTCTTAGTAATTTTATTTCTGCCACGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS TCA 72 bp | AAAGTAACATTCAGCACCACCGAAACGGACACGGACTaGTCCCTCCCCAGCCTGCAGGTAAAGCTGATTCCG | + |
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Preference number: 6 (lower is better) Translates to: KVTFSTTETDTD*SLPSLQVKLIP Trigger: CGGAATCAGCTTTACCTGCAGGCTGGGGAGGGATCAGTCCGTGTCCGTTTCGGTGGTGCTGAATGTTACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS TCA 72 bp | CGGTACCAGAGCAGTTCTTCCTCTCTGGTGTGGTTTTaGACAGCACATATCAGAGATGCTTGGGAGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RYQSSSSSLVWF*TAHIRDAWEPG Trigger: ACCTGGCTCCCAAGCATCTCTGATATGTGCTGTTCAAAACCACACCAGAGAGGAAGAACTGCTCTGGTACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS CCA 72 bp | TCCCCTCCTCTCGGTACCAGAGCAGTTCTTCCTCTCTaGTGTGGTTTTGAACAGCACATATCAGAGATGCTT | + |
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Preference number: 6 (lower is better) Translates to: SPPLGTRAVLPL*CGFEQHISEML Trigger: AAGCATCTCTGATATGTGCTGTTCAAAACCACACCAGAGAGGAAGAACTGCTCTGGTACCGAGAGGAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS GCA 72 bp | ACCACATCATTTGAGCCTGGGGGTTGGCTTTCACATTaGAAACCAACTTCACATTACTGCCTTCCTCAACTG | + |
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Preference number: 6 (lower is better) Translates to: TTSFEPGGWLSH*KPTSHYCLPQL Trigger: CAGTTGAGGAAGGCAGTAATGTGAAGTTGGTTTGCAATGTGAAAGCCAACCCCCAGGCTCAAATGATGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS TCA 72 bp | GTAGGTTCCGTTGTCAGGCTTCTCGACTTTGGTGATTaGCAGCTGAAAAGACTCACTTGTCTGTTGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: VGSVVRLLDFGD*QLKRLTCLLDL Trigger: CAAATCCAACAGACAAGTGAGTCTTTTCAGCTGTCAATCACCAAAGTCGAGAAGCCTGACAACGGAACCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS TCA 72 bp | AACTGTAGGTTCCGTTGTCAGGCTTCTCGACTTTGGTaGTTGACAGCTGAAAAGACTCACTTGTCTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: NCRFRCQASRLW*LTAEKTHLSVG Trigger: TCCAACAGACAAGTGAGTCTTTTCAGCTGTCAATCACCAAAGTCGAGAAGCCTGACAACGGAACCTACAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS CAA 72 bp | TCTGGTGTGGTTTTGAACAGCACATATCAGAGATGCTaGGGAGCCAGGTGTAGTATCCAGGATATAGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SGVVLNSTYQRC*GARCSIQDIVL Trigger: GAGAACTATATCCTGGATACTACACCTGGCTCCCAAGCATCTCTGATATGTGCTGTTCAAAACCACACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS CAA 72 bp | GGTGAAAGTCCAAGCTCTCCGTTTTCAGAGATGACTTaGCAATACAACTGTAGGTTCCGTTGTCAGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GESPSSPFSEMT*QYNCRFRCQAS Trigger: AGAAGCCTGACAACGGAACCTACAGTTGTATTGCAAAGTCATCTCTGAAAACGGAGAGCTTGGACTTTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS CAA 90 bp | TTCTTCCTCTCTGGTGTGGTTTTGAACAGCACATATCAGAGATGCTaGGGAGCCAGGTGTAGTATCCAGGATATAGTTCTCAGTTTTACC | + |
|
Preference number: 6 (lower is better) Translates to: FFLSGVVLNSTYQRC*GARCSIQDIVLSFT Trigger: GGTAAAACTGAGAACTATATCCTGGATACTACACCTGGCTCCCAAGCATCTCTGATATGTGCTGTTCAAAACCACACCAGAGAGGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS TCA 72 bp | AATCAGGTGAAAGTCCAAGCTCTCCGTTTTCAGAGATaGCTTTGCAATACAACTGTAGGTTCCGTTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: NQVKVQALRFQR*LCNTTVGSVVR Trigger: CCTGACAACGGAACCTACAGTTGTATTGCAAAGTCATCTCTGAAAACGGAGAGCTTGGACTTTCACCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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| CDS CCA 72 bp | TACTGTTTTTGTACCACATCATTTGAGCCTGGGGGTTaGCTTTCACATTGCAAACCAACTTCACATTACTGC | + |
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Preference number: 6 (lower is better) Translates to: YCFCTTSFEPGG*LSHCKPTSHYC Trigger: GCAGTAATGTGAAGTTGGTTTGCAATGTGAAAGCCAACCCCCAGGCTCAAATGATGTGGTACAAAAACAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000328886.5 ENST00000538566.6 |
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