RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144747

Ensembl transcript IDs: ENST00000398559.7, ENST00000488010.5, ENST00000645406.1, ENST00000646304.1, ENST00000646708.1

Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGTGTATAGAGGTGTCTATACTATCCATGGTTTCAGACGTTCACTaGGGGTCTTGGAACGTATGTCCCATGGGTAAGAGGGAACTACTA +
Preference number: 1 (lower is better)
Translates to: QCIEVSILSMVSDVH*GSWNVCPMGKRELL
Trigger: TAGTAGTTCCCTCTTACCCATGGGACATACGTTCCAAGACCCCCAGTGAACGTCTGAAACCATGGATAGTATAGACACCTCTATACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
3UTR CCA 90 bp GTTTCATATAGAGTAGTCTCCCCTTATCCACGATTTTGCTTTCTGTaGTTTCGGTTACTCACGGTCAACCACAGTCTGATTACAGGTGAG +
Preference number: 1 (lower is better)
Translates to: VSYRVVSPYPRFCFL*FRLLTVNHSLITGE
Trigger: CTCACCTGTAATCAGACTGTGGTTGACCGTGAGTAACCGAAACCACAGAAAGCAAAATCGTGGATAAGGGGAGACTACTCTATATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
3UTR-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGCACCTGGCCGTAAATaGGAGTTTTTATGTGCAAGT +
Preference number: 2 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELAPGRK*EFLCAS
Trigger: ACTTGCACATAAAAACTCTCATTTACGGCCAGGTGC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
3UTR-3UTR CCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCTTTTCCAATTCAACCTaGTACCTATTGTTCTCATCC +
Preference number: 2 (lower is better)
Translates to: ELERDMVGVLETENGLRSFSNST*YLLFSS
Trigger: GGATGAGAACAATAGGTACCAGGTTGAATTGGAAAA...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
3UTR-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCAGACAGTGTCAGTGTaGCTCTTACTTTTAAAGGAA +
Preference number: 2 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELQTVSV*LLLLKE
Trigger: TTCCTTTAAAAGTAAGAGTCACACTGACACTGTCTG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
3UTR-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCATGTACAGGTTTCTCTaGATAGGTACCAAAAGGTAC +
Preference number: 2 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELMYRFL*IGTKRY
Trigger: GTACCTTTTGGTACCTATCCAGAGAAACCTGTACAT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
3UTR-3UTR TCA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTGATTCTAGCTGGGCTTaGAATCTACTGTTTTCCTGT +
Preference number: 2 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSDSSWA*NLLFSC
Trigger: ACAGGAAAACAGTAGATTTCAAGCCCAGCTAGAATC...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488010.5
3UTR-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACAGACAGTGTCAGTGTaGCTCTTACTTTTAAAGGAA +
Preference number: 2 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRQTVSV*LLLLKE
Trigger: TTCCTTTAAAAGTAAGAGTCACACTGACACTGTCTG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
3UTR CCA 72 bp GAGGTGTCTATACTATCCATGGTTTCAGACGTTCACTaGGGGTCTTGGAACGTATGTCCCATGGGTAAGAGG +
Preference number: 3 (lower is better)
Translates to: EVSILSMVSDVH*GSWNVCPMGKR
Trigger: CCTCTTACCCATGGGACATACGTTCCAAGACCCCCAGTGAACGTCTGAAACCATGGATAGTATAGACACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
3UTR GCA 72 bp GTTTCATATAGAGTAGTCTCCCCTTATCCACGATTTTaGTTTCTGTGGTTTCGGTTACTCACGGTCAACCAC +
Preference number: 3 (lower is better)
Translates to: VSYRVVSPYPRF*FLWFRLLTVNH
Trigger: GTGGTTGACCGTGAGTAACCGAAACCACAGAAAGCAAAATCGTGGATAAGGGGAGACTACTCTATATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
3UTR-3UTR CAA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTCAACCTGGTACCTATaGTTCTCATCCTCCAGTTTA +
Preference number: 3 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWSTWYL*FSSSSL
Trigger: TAAACTGGAGGATGAGAACAATAGGTACCAGGTTGA...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCCTCCTCAGCCGGCAGTaGCGGCGGCAGCACCAAGCG +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSLLSRQ*RRQHQA
Trigger: CGCTTGGTGCTGCCGCCGCCACTGCCGGCTGAGGAG...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTCCTCAGCCGGCAGTaGCGGCGGCAGCACCAAGCG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLLSRQ*RRQHQA
Trigger: CGCTTGGTGCTGCCGCCGCCACTGCCGGCTGAGGAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCGCCTGGGACAGGGCCTaGTTAGCGAAGCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSAWDRA*LAKLES
Trigger: GCTCTCCAGCTTCGCTAAGCAGGCCCTGTCCCAGGC...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCCGTTCCCGCACAGCTaGGACGAAGGGGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELPFPHS*DEGGPC
Trigger: ACATGGGCCCCCTTCGTCTCAGCTGTGCGGGAACGG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGCCGTTCCCGCACAGCTaGGACGAAGGGGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWPFPHS*DEGGPC
Trigger: ACATGGGCCCCCTTCGTCTCAGCTGTGCGGGAACGG...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCGGTTCTGTCAGCGTGTaGCCATTACCCCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSGSVSV*PLPRQP
Trigger: AGGCTGTCGGGGTAATGGCCACACGCTGACAGAACC...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTGGTCTCGGCCCAGATaGTCGGCTCCTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELWSRPR*SAPLPG
Trigger: TCCAGGAAGAGGAGCCGAGCATCTGGGCCGAGACCA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCCTCGGCTCCTCTTCCTaGATGTCCAGAACCCTGTCA +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSLGSSS*MSRTLS
Trigger: TGACAGGGTTCTGGACATCCAGGAAGAGGAGCCGAG...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGGGCCCATGTGCGCATaGGCTTGCTTCTTCCACGTA +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELGPMCA*ACFFHV
Trigger: TACGTGGAAGAAGCAAGCGCATGCGCACATGGGCCC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGTCTCGGCCCAGATaGTCGGCTCCTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWWSRPR*SAPLPG
Trigger: TCCAGGAAGAGGAGCCGAGCATCTGGGCCGAGACCA...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCCTTTTCCACTCGGCTaGTTCTGTCAGCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELPFPLG*FCQRVA
Trigger: GGCCACACGCTGACAGAACCAGCCGAGTGGAAAAGG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGCGAAGCTGGAGAGCTaGGAGGCGTTGAACCAACTC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELAKLES*EALNQL
Trigger: GAGTTGGTTCAACGCCTCCCAGCTCTCCAGCTTCGC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCATAGACTTCTGGGCCTaGGACAGGGCCTGCTTAGCG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELIDFWA*DRACLA
Trigger: CGCTAAGCAGGCCCTGTCCCAGGCCCAGAAGTCTAT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTGTCAATAGACTTCTaGGCCTGGGACAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLSIDF*AWDRAC
Trigger: GCAGGCCCTGTCCCAGGCCCAGAAGTCTATTGACAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGCTCTCCATACGGAATaGTCTCGGCCCAGATGCTCG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELALHTE*SRPRCS
Trigger: CGAGCATCTGGGCCGAGACCATTCCGTATGGAGAGC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTCCCACGACGATGTCTaGGATCCCAGGGTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELSHDDV*DPRVAC
Trigger: GCAAGCAACCCTGGGATCCCAGACATCGTCGTGGGA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCGAAAGTGCTTCTGGCTaGCTTTCAGCAGGTTCACAC +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSESASG*LSAGSH
Trigger: GTGTGAACCTGCTGAAAGTCAGCCAGAAGCACTTTC...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTCAAGCAATGCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELFKQCS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGCATTGCTTGAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR CCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGCCTTTTCCACTCGGCTaGTTCTGTCAGCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWPFPLG*FCQRVA
Trigger: GGCCACACGCTGACAGAACCAGCCGAGTGGAAAAGG...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGCTGTCAATAGACTTCTaGGCCTGGGACAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWLSIDF*AWDRAC
Trigger: GCAGGCCCTGTCCCAGGCCCAGAAGTCTATTGACAG...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTCGGCTCCTCTTCCTaGATGTCCAGAACCCTGTCA +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLGSSS*MSRTLS
Trigger: TGACAGGGTTCTGGACATCCAGGAAGAGGAGCCGAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTATCCCATCCTCCACTaGCAGGGGAACTTATTCCCG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELYPILH*QGNLFP
Trigger: CGGGAATAAGTTCCCCTGTCAGTGGAGGATGGGATA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGTTTCAACCCCCAGGTTaGAGTATCCCATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWEFQPPG*SIPSST
Trigger: AGTGGAGGATGGGATACTTCAACCTGGGGGTTGAAA...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCAATGTTTCTTGCTGCTaGCGGGCTTCTTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELNVSCC*RASSWA
Trigger: GGCCCAAGAAGAAGCCCGTCAGCAGCAAGAAACATT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR TCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCCTAAGGTCCCCCACTTaGATGGCTAATGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSLRSPT*MANVSC
Trigger: GCAAGAAACATTAGCCATTCAAGTGGGGGACCTTAG...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTCCTGGAGTCTCTGCTaGAGTTCACCGATCTCATGG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELSWSLC*SSPISW
Trigger: CCATGAGATCGGTGAACTTCAGCAGAGACTCCAGGA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCATGTGCGCATGCGCTTaGTTCTTCCACGTACACAGC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELMCACA*FFHVHS
Trigger: GCTGTGTACGTGGAAGAAGCAAGCGCATGCGCACAT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCAGAGCAGCTTCCTGTaGCTCACTATCCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELQSSFL*LTILCS
Trigger: GCTGCAAAGGATAGTGAGGCACAGGAAGCTGCTCTG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTCTGTACGCTGCAATaGAAGCCTAAGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELFCTLQ*KPKVPH
Trigger: GTGGGGGACCTTAGGCTTGCATTGCAGCGTACAGAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTCTCTCAACTGCTGCTaGCAGCAAGGTCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELSLNCC*QQGLGF
Trigger: GAATCCCAGACCTTGCTGGCAGCAGCAGTTGAGAGA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCACGTTCTCTCTCAACTaGTGCTGCCAGCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELTFSLN*CCQQGL
Trigger: CAGACCTTGCTGGCAGCAGCAGTTGAGAGAGAACGT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGCTGGACTCTTCTGAATaGTCTGGACATCAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWELDSSE*SGHQLA
Trigger: CGCCAACTGATGTCCAGACCATTCAGAAGAGTCCAG...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGCTGCCAGCAAGGTCTaGGATTCACCAAGCCTATCA +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELAASKV*DSPSLS
Trigger: TGATAGGCTTGGTGAATCCCAGACCTTGCTGGCAGC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACCGTTCCCGCACAGCTaGGACGAAGGGGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRPFPHS*DEGGPC
Trigger: ACATGGGCCCCCTTCGTCTCAGCTGTGCGGGAACGG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTAGAGCTGGGAGGCGTTaGACCAACTCATCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSRAGRR*TNSSPL
Trigger: GAGGGGCGATGAGTTGGTTCAACGCCTCCCAGCTCT...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTTCAACCCCCAGGTTaGAGTATCCCATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELFQPPG*SIPSST
Trigger: AGTGGAGGATGGGATACTTCAACCTGGGGGTTGAAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCGATGCAGAGAGAAGCTaGAAAGATGTCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSDAERS*KDVCIK
Trigger: CTTGATGCAGACATCTTTTCAGCTTCTCTCTGCATC...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGAATGTTTCTTGCTGCTaGCGGGCTTCTTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWNVSCC*RASSWA
Trigger: GGCCCAAGAAGAAGCCCGTCAGCAGCAAGAAACATT...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTCAGCAGGTTCACACTaGTCAGCCACCTTGTCTAAC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELSAGSH*SATLSN
Trigger: GTTAGACAAGGTGGCTGAGCAGTGTGAACCTGCTGA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCTTCCTTCTCAGAAAGTaGTTCTGGCTGACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSFLLRK*FWLTFS
Trigger: GCTGAAAGTCAGCCAGAAGCACTTTCTGAGAAGGAA...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCAGTAAGTTCTTTGTATaGACTATCCAGGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSSKFFV*TIQGSL
Trigger: CAGGCTGCCCTGGATAGTGCATACAAAGAACTTACT...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGCAGAGCAGCTTCCTGTaGCTCACTATCCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWQSSFL*LTILCS
Trigger: GCTGCAAAGGATAGTGAGGCACAGGAAGCTGCTCTG...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGCTTGTTCTGTACGCTaGAATGCAAGCCTAAGGTCC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELACSVR*NASLRS
Trigger: GGACCTTAGGCTTGCATTGCAGCGTACAGAACAAGC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATGCGAAGCTGGAGAGCTaGGAGGCGTTGAACCAACTC +
Preference number: 4 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDAKLES*EALNQL
Trigger: GAGTTGGTTCAACGCCTCCCAGCTCTCCAGCTTCGC...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTGGACTCTTCTGAATaGTCTGGACATCAGTTGGCG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLDSSE*SGHQLA
Trigger: CGCCAACTGATGTCCAGACCATTCAGAAGAGTCCAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCTCAGGAGTTCTTGACTaGCCAATGTGCAAGGATTCA +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSSGVLD*PMCKDS
Trigger: TGAATCCTTGCACATTGGCCAGTCAAGAACTCCTGA...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGCTCAGAAAGTGCTTCTaGCTGACTTTCAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWELRKCF*LTFSRF
Trigger: GAACCTGCTGAAAGTCAGCCAGAAGCACTTTCTGAG...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGGGTCCCCCACTTGAATaGCTAATGTTTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWEGPPLE*LMFLAA
Trigger: AGCAGCAAGAAACATTAGCCATTCAAGTGGGGGACC...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCACCACTGGACTCTTCTaGATGGTCTGGACATCAGTT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELTTGLF*MVWTSV
Trigger: AACTGATGTCCAGACCATTCAGAAGAGTCCAGTGGT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTCATCCATGTCTACCTaGAGACGGCCAAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELSSMST*RRPRSF
Trigger: GAAAGATCTTGGCCGTCTTCAGGTAGACATGGATGA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTATCCAGGGCAGCCTaGATACTTCGGTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLSRAA*ILRFFS
Trigger: AGAAAAGAACCGAAGTATTCAGGCTGCCCTGGATAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR TCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCGCAGCATTGGCTTTGTaGAGATCAGTAAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSAALAL*RSVSSL
Trigger: CAAAGAACTTACTGATCTTCACAAAGCCAATGCTGC...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTAAGGTCCCCCACTTaGATGGCTAATGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLRSPT*MANVSC
Trigger: GCAAGAAACATTAGCCATTCAAGTGGGGGACCTTAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGCCTGGGACAGGGCCTaGTTAGCGAAGCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRAWDRA*LAKLES
Trigger: GCTCTCCAGCTTCGCTAAGCAGGCCCTGTCCCAGGC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGGAGGAGAAGGTGTATTaGTCTGCCTGTCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWEEEKVY*SACLHV
Trigger: AACATGAAGACAGGCAGAGCAATACACCTTCTCCTC...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTCAGCAGGTTCACACTaGTCAGCCACCTTGTCTAAC +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWSAGSH*SATLSN
Trigger: GTTAGACAAGGTGGCTGAGCAGTGTGAACCTGCTGA...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTCTAGCTGGGCTTTTCTGTACGCTGCAATaGAAGCCTAAGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: CSHPPVYTAYFSLILAGLFCTLQ*KPKVPH
Trigger: GTGGGGGACCTTAGGCTTGCATTGCAGCGTACAGAA...AAGCCCAGCTAGAATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTATAGACTTCTGGGCCTaGGACAGGGCCTGCTTAGCG +
Preference number: 4 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSIDFWA*DRACLA
Trigger: CGCTAAGCAGGCCCTGTCCCAGGCCCAGAAGTCTAT...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTGCTCTCCATACGGAATaGTCTCGGCCCAGATGCTCG +
Preference number: 4 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSALHTE*SRPRCS
Trigger: CGAGCATCTGGGCCGAGACCATTCCGTATGGAGAGC...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCAGGAGAGGCTATTGGTaGACTCTGAGGTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELRRGYW*TLRFSV
Trigger: AACACTGAACCTCAGAGTCCACCAATAGCCTCTCCT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCACAGTCCTCCGAACTaGCTTTGTGATTGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELHSPPN*LCDCFR
Trigger: CCTAAAGCAATCACAAAGCCAGTTCGGAGGACTGTG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTCAGAAAGTGCTTCTaGCTGACTTTCAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLRKCF*LTFSRF
Trigger: GAACCTGCTGAAAGTCAGCCAGAAGCACTTTCTGAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGGTCCCCCACTTGAATaGCTAATGTTTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELGPPLE*LMFLAA
Trigger: AGCAGCAAGAAACATTAGCCATTCAAGTGGGGGACC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAAGAGCTGGGAGGCGTTaGACCAACTCATCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRRAGRR*TNSSPL
Trigger: GAGGGGCGATGAGTTGGTTCAACGCCTCCCAGCTCT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTATCCCATCCTCCACTaGCAGGGGAACTTATTCCCG +
Preference number: 4 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDYPILH*QGNLFP
Trigger: CGGGAATAAGTTCCCCTGTCAGTGGAGGATGGGATA...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGCCAGAGTTTCCCCTaGAACACACAAAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWCQSFP*NTQRRV
Trigger: GACTCTTCTTTGTGTGTTTCAGGGGAAACTCTGGCA...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTTGTCTCGAGCTCGCTaGGCTCTCACTTATTACACT +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWLSRAR*ALTYYT
Trigger: AGTGTAATAAGTGAGAGCTCAGCGAGCTCGAGACAA...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGATGCAGAGAGAAGCTaGAAAGATGTCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELDAERS*KDVCIK
Trigger: CTTGATGCAGACATCTTTTCAGCTTCTCTCTGCATC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCAGGCATTGGTCCAAATaGGTGATCATGAGACTCATC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELRHWSK*VIMRLI
Trigger: GATGAGTCTCATGATCACTCATTTGGACCAATGCCT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACGAAGGGGGCCCATGTaGGCATGCGCTTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRRRGPM*ACACFF
Trigger: GAAGAAGCAAGCGCATGCGCACATGGGCCCCCTTCG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATGGTCTCGGCCCAGATaGTCGGCTCCTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRWSRPR*SAPLPG
Trigger: TCCAGGAAGAGGAGCCGAGCATCTGGGCCGAGACCA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGAGGAGAAGGTGTATTaGTCTGCCTGTCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELEEKVY*SACLHV
Trigger: AACATGAAGACAGGCAGAGCAATACACCTTCTCCTC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCCTAAAGCATATCCCTTaGCTGACAATTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSLKHIP*LTIHHL
Trigger: CAGATGATGAATTGTCAGGCAAGGGATATGCTTTAG...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTCCTTCTCAGAAAGTaGTTCTGGCTGACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELFLLRK*FWLTFS
Trigger: GCTGAAAGTCAGCCAGAAGCACTTTCTGAGAAGGAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGAGGAGAGGCTATTGGTaGACTCTGAGGTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWRRGYW*TLRFSV
Trigger: AACACTGAACCTCAGAGTCCACCAATAGCCTCTCCT...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTTAGGAGAGGCTATTaGTGGACTCTGAGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELFRRGY*WTLRFS
Trigger: ACTGAACCTCAGAGTCCACCAATAGCCTCTCCTAAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGTTTAGGAGAGGCTATTaGTGGACTCTGAGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: SVVLPYQHHLLNLSVTWWFRRGY*WTLRFS
Trigger: ACTGAACCTCAGAGTCCACCAATAGCCTCTCCTAAA...CCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTCAGGAGTTCTTGACTaGCCAATGTGCAAGGATTCA +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELSGVLD*PMCKDS
Trigger: TGAATCCTTGCACATTGGCCAGTCAAGAACTCCTGA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGAATAATCCTCCTTTCTaGCAGCCGCTTGTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: SVVLPYQHHLLNLSVTWWNNPPF*QPLVLY
Trigger: GTACAGAACAAGCGGCTGCCAGAAAGGAGGATTATT...CCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCAATAATCCTCCTTTCTaGCAGCCGCTTGTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELNNPPF*QPLVLY
Trigger: GTACAGAACAAGCGGCTGCCAGAAAGGAGGATTATT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTTTTGCTGGAGGTTTTaGTACCACTGGACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWFCWRF*YHWTLL
Trigger: CAGAAGAGTCCAGTGGTATCAAAACCTCCAGCAAAA...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTCAAAAGCATCAGATaGACAGCAACTCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELFKSIR*TATLSE
Trigger: CTCACTGAGAGTTGCTGTTCATCTGATGCTTTTGAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGCAGCATTGGCTTTGTaGAGATCAGTAAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELAALAL*RSVSSL
Trigger: CAAAGAACTTACTGATCTTCACAAAGCCAATGCTGC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGTTGATGAAACACTTTaGCTCAGTTCCTGGTTTCGA +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELVDETL*LSSWFR
Trigger: TCGAAACCAGGAACTGAGTCAAAGTGTTTCATCAAC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGATTCTAGCTGGGCTTaGAATCTACTGTTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELDSSWA*NLLFSC
Trigger: ACAGGAAAACAGTAGATTTCAAGCCCAGCTAGAATC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGAGGCATTGGTCCAAATaGGTGATCATGAGACTCATC +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWRHWSK*VIMRLI
Trigger: GATGAGTCTCATGATCACTCATTTGGACCAATGCCT...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGTCCCTTAGCTTTAGCTaGGACTGTAGGTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWESLSFS*DCRFSI
Trigger: AATTGAAAACCTACAGTCTCAGCTAAAGCTAAGGGA...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCAATCAGAGATCCAATaGCAGAAACACTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELQSEIQ*QKHCLE
Trigger: TTCCAGACAGTGTTTCTGTCATTGGATCTCTGATTG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGGGCCCATGTGCGCATaGGCTTGCTTCTTCCACGTA +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRGPMCA*ACFFHV
Trigger: TACGTGGAAGAAGCAAGCGCATGCGCACATGGGCCC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCAACTGGCTTTGTGATTaGTTTAGGAGAGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELNWLCD*FRRGYW
Trigger: CCAATAGCCTCTCCTAAAGCAATCACAAAGCCAGTT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTATGTCCTTTGTTTCTaGTGTGAGAGACTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELYVLCF*CERLRR
Trigger: TCTACGCAGTCTCTCACAGCAGAAACAAAGGACATA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCAGCATCTCTCTCTTTaGAGGCTAGTTGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELQHLSL*RLVELS
Trigger: AGAAAGTTCAACTAGCCTGCAAAGAGAGAGATGCTG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCACCTGTTTCAAATGCTaGAACTCCTCTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELTCFKC*NSSSSS
Trigger: AGAGCTAGAAGAGGAGTTGCAGCATTTGAAACAGGT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTCTCAACCTCTTCTTTaGCATCAAGGACCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELSQPLL*HQGPVS
Trigger: TGAAACAGGTCCTTGATGGCAAAGAAGAGGTTGAGA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR GCA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATGCTTGTTCTGTACGCTaGAATGCAAGCCTAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDACSVR*NASLRS
Trigger: GGACCTTAGGCTTGCATTGCAGCGTACAGAACAAGC...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTGGGATCCCAGGGTTaGTTGCAAATTTTCTATTTG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLGSQG*LQIFYL
Trigger: CAAATAGAAAATTTGCAAGCAACCCTGGGATCCCAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGGTTCTGTCAGCGTGTaGCCATTACCCCGACAGCCT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRGSVSV*PLPRQP
Trigger: AGGCTGTCGGGGTAATGGCCACACGCTGACAGAACC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACCTTTTCCACTCGGCTaGTTCTGTCAGCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRPFPLG*FCQRVA
Trigger: GGCCACACGCTGACAGAACCAGCCGAGTGGAAAAGG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGCGAAGCTGGAGAGCTaGGAGGCGTTGAACCAACTC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRAKLES*EALNQL
Trigger: GAGTTGGTTCAACGCCTCCCAGCTCTCCAGCTTCGC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAATAGACTTCTGGGCCTaGGACAGGGCCTGCTTAGCG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRIDFWA*DRACLA
Trigger: CGCTAAGCAGGCCCTGTCCCAGGCCCAGAAGTCTAT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGCTCTCCATACGGAATaGTCTCGGCCCAGATGCTCG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRALHTE*SRPRCS
Trigger: CGAGCATCTGGGCCGAGACCATTCCGTATGGAGAGC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTCTAGCTGGGCTTCACAGTCCTCCGAACTaGCTTTGTGATTGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: CSHPPVYTAYFSLILAGLHSPPN*LCDCFR
Trigger: CCTAAAGCAATCACAAAGCCAGTTCGGAGGACTGTG...AAGCCCAGCTAGAATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATCCCACGACGATGTCTaGGATCCCAGGGTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSHDDV*DPRVAC
Trigger: GCAAGCAACCCTGGGATCCCAGACATCGTCGTGGGA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCGCTAGAAACAGAAAATaGCTTGCGTTCCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ELERDMVGVLETENGLRSARNRK*LAFLFF
Trigger: AAAGAAAAGGAACGCAAGCCATTTTCTGTTTCTAGC...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGCGAGAGAAAGGCACTaGAGAAATTTTCAGATTCAT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELARERH*RNFQIH
Trigger: ATGAATCTGAAAATTTCTTCAGTGCCTTTCTCTCGC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCATTCATCATCTGAATTaGTTTCACTTACACTCCGGC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELIHHLN*FHLHSG
Trigger: GCCGGAGTGTAAGTGAAATCAATTCAGATGATGAAT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATCTATCCAGGGCAGCCTaGATACTTCGGTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDLSRAA*ILRFFS
Trigger: AGAAAAGAACCGAAGTATTCAGGCTGCCCTGGATAG...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGGATTCTAGCTGGGCTTaGAATCTACTGTTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWDSSWA*NLLFSC
Trigger: ACAGGAAAACAGTAGATTTCAAGCCCAGCTAGAATC...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTCCCTTAGCTTTAGCTaGGACTGTAGGTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELSLSFS*DCRFSI
Trigger: AATTGAAAACCTACAGTCTCAGCTAAAGCTAAGGGA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTTCTCTCTCAACTGCTaGAGTTCACCGATCTCATGG +
Preference number: 4 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDFSLNC*SSPISW
Trigger: CCATGAGATCGGTGAACTTCAGCAGTTGAGAGAGAA...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTCTAGCTGGGCTTCTTGACTGGCCAATGTaGAAGGATTCATGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: CSHPPVYTAYFSLILAGLLDWPM*KDSCKL
Trigger: CAGCTTACATGAATCCTTGCACATTGGCCAGTCAAG...AAGCCCAGCTAGAATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTAAAGCATATCCCTTaGCTGACAATTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLKHIP*LTIHHL
Trigger: CAGATGATGAATTGTCAGGCAAGGGATATGCTTTAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCACTTTCTTCCATTTCTaGTTCCTCAGTGGGTATAAC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELTFFHF*FLSGYN
Trigger: GTTATACCCACTGAGGAAGCAGAAATGGAAGAAAGT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGACAGTTAACAGGAGTTaGACTTCGTCCACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWTVNRS*TSSTFF
Trigger: GAAGAAAGTGGACGAAGTGCAACTCCTGTTAACTGT...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGCAGCATCTCTCTCTTTaGAGGCTAGTTGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWQHLSL*RLVELS
Trigger: AGAAAGTTCAACTAGCCTGCAAAGAGAGAGATGCTG...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATGAGTTCTTCTGTAGCTaGACGTTCTCTCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDEFFCS*TFSLNC
Trigger: GCAGTTGAGAGAGAACGTGCAGCTACAGAAGAACTC...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTCAAGCAATGCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRFKQCS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGCATTGCTTGAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACTCGGCTCCTCTTCCTaGATGTCCAGAACCCTGTCA +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLGSSS*MSRTLS
Trigger: TGACAGGGTTCTGGACATCCAGGAAGAGGAGCCGAG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGTTTCAAACTTACAGTTaGCACCTTCATATCCGATTC +
Preference number: 4 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWEFQTYS*HLHIRF
Trigger: GAATCGGATATGAAGGTGCCAACTGTAAGTTTGAAA...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGCTGTCCTTCATTTATTaGTGTGGAAGAAACCAAGAT +
Preference number: 4 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWELSFIY*CGRNQD
Trigger: ATCTTGGTTTCTTCCACACCAATAAATGAAGGACAG...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCCAAGATCTTTCTCTTaGCGTTCTACCATGGAATTT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELPRSFS*RSTMEF
Trigger: AAATTCCATGGTAGAACGCCAAGAGAAAGATCTTGG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATATCCCATCCTCCACTaGCAGGGGAACTTATTCCCG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRYPILH*QGNLFP
Trigger: CGGGAATAAGTTCCCCTGTCAGTGGAGGATGGGATA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATGCTATTGGTGGACTCTaGGGTTCAGTGTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDAIGGL*GSVFDF
Trigger: GAAATCAAACACTGAACCTCAGAGTCCACCAATAGC...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGGCGAGAGAAAGGCACTaGAGAAATTTTCAGATTCAT +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWARERH*RNFQIH
Trigger: ATGAATCTGAAAATTTCTTCAGTGCCTTTCTCTCGC...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTACCACTGGACTCTTCTaGATGGTCTGGACATCAGTT +
Preference number: 4 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSTTGLF*MVWTSV
Trigger: AACTGATGTCCAGACCATTCAGAAGAGTCCAGTGGT...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGCTTCTGCAATTCTTTaGGTAAACTCATCTTTCAAG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELASAIL*VNSSFK
Trigger: CTTGAAAGATGAGTTTACTCAAAGAATTGCAGAAGC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTTCATCCATGTCTACCTaGAGACGGCCAAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSSSMST*RRPRSF
Trigger: GAAAGATCTTGGCCGTCTTCAGGTAGACATGGATGA...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAAATGTTTCTTGCTGCTaGCGGGCTTCTTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRNVSCC*RASSWA
Trigger: GGCCCAAGAAGAAGCCCGTCAGCAGCAAGAAACATT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATCCTGGAGTCTCTGCTaGAGTTCACCGATCTCATGG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSWSLC*SSPISW
Trigger: CCATGAGATCGGTGAACTTCAGCAGAGACTCCAGGA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTCCATGGAAGACATCTaGATTTTGTTAGCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWSMEDI*ILLARS
Trigger: ACTCCTTGCTAACAAAATTCAGATGTCTTCCATGGA...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCAAAAATGAGGTCATTTaGATTGCCCTGAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELKNEVI*IALKNS
Trigger: GGAGTTTTTCAGGGCAATTCAAATGACCTCATTTTT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAATGTGCGCATGCGCTTaGTTCTTCCACGTACACAGC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRMCACA*FFHVHS
Trigger: GCTGTGTACGTGGAAGAAGCAAGCGCATGCGCACAT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTAACAGTTTCTTCGTaGTTGCCTTCAGTTTTAGGT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLTVSS*LPSVLG
Trigger: ACCTAAAACTGAAGGCAAGCACGAAGAAACTGTTAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTCTAGCTGGGCTTTATGTCCTTTGTTTCTaGTGTGAGAGACTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: CSHPPVYTAYFSLILAGLYVLCF*CERLRR
Trigger: TCTACGCAGTCTCTCACAGCAGAAACAAAGGACATA...AAGCCCAGCTAGAATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGATGATGTTAGAATTGTaGAGCTGCTGTTTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWEMMLEL*SCCFES
Trigger: ACTTTCAAAACAGCAGCTGCACAATTCTAACATCAT...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACAGAGCAGCTTCCTGTaGCTCACTATCCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRQSSFL*LTILCS
Trigger: GCTGCAAAGGATAGTGAGGCACAGGAAGCTGCTCTG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTCTGTACGCTGCAATaGAAGCCTAAGGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRFCTLQ*KPKVPH
Trigger: GTGGGGGACCTTAGGCTTGCATTGCAGCGTACAGAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATCTCTCAACTGCTGCTaGCAGCAAGGTCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSLNCC*QQGLGF
Trigger: GAATCCCAGACCTTGCTGGCAGCAGCAGTTGAGAGA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAACGTTCTCTCTCAACTaGTGCTGCCAGCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRTFSLN*CCQQGL
Trigger: CAGACCTTGCTGGCAGCAGCAGTTGAGAGAGAACGT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTTCAAACTTACAGTTaGCACCTTCATATCCGATTC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELFQTYS*HLHIRF
Trigger: GAATCGGATATGAAGGTGCCAACTGTAAGTTTGAAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGCTTCATTTATTGGTGTaGAAGAAACCAAGATATCAG +
Preference number: 4 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWELHLLV*KKPRYQ
Trigger: CTGATATCTTGGTTTCTTCCACACCAATAAATGAAG...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTGTCCTTCATTTATTaGTGTGGAAGAAACCAAGAT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLSFIY*CGRNQD
Trigger: ATCTTGGTTTCTTCCACACCAATAAATGAAGGACAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGCTGCCAGCAAGGTCTaGGATTCACCAAGCCTATCA +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRAASKV*DSPSLS
Trigger: TGATAGGCTTGGTGAATCCCAGACCTTGCTGGCAGC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTTTCCAATTCAACCTaGTACCTATTGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELFSNST*YLLFSS
Trigger: GGATGAGAACAATAGGTACCAGGTTGAATTGGAAAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGCTAGAAACAGAAAATaGCTTGCGTTCCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELARNRK*LAFLFF
Trigger: AAAGAAAAGGAACGCAAGCCATTTTCTGTTTCTAGC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTTCAACCCCCAGGTTaGAGTATCCCATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRFQPPG*SIPSST
Trigger: AGTGGAGGATGGGATACTTCAACCTGGGGGTTGAAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTTCAAAAGCATCAGATaGACAGCAACTCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDFKSIR*TATLSE
Trigger: CTCACTGAGAGTTGCTGTTCATCTGATGCTTTTGAA...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGAAAGTGCTTCTGGCTaGCTTTCAGCAGGTTCACAC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRESASG*LSAGSH
Trigger: GTGTGAACCTGCTGAAAGTCAGCCAGAAGCACTTTC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTTAACAGTTTCTTCGTaGTTGCCTTCAGTTTTAGGT +
Preference number: 4 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWLTVSS*LPSVLG
Trigger: ACCTAAAACTGAAGGCAAGCACGAAGAAACTGTTAA...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTCTAGCTGGGCTTTCTGCTGTGAGAGACTaGGTAGACGTATTAGATATA +
Preference number: 4 (lower is better)
Translates to: CSHPPVYTAYFSLILAGLSAVRD*VDVLDI
Trigger: TATATCTAATACGTCTACGCAGTCTCTCACAGCAGA...AAGCCCAGCTAGAATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATCAGCAGGTTCACACTaGTCAGCCACCTTGTCTAAC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSAGSH*SATLSN
Trigger: GTTAGACAAGGTGGCTGAGCAGTGTGAACCTGCTGA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATACCTGTTTCAAATGCTaGAACTCCTCTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDTCFKC*NSSSSS
Trigger: AGAGCTAGAAGAGGAGTTGCAGCATTTGAAACAGGT...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGCTTGTTCTGTACGCTaGAATGCAAGCCTAAGGTCC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRACSVR*NASLRS
Trigger: GGACCTTAGGCTTGCATTGCAGCGTACAGAACAAGC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCAAAACTCTCAATAAATaGCAACTGAAGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELKTLNK*QLKRWR
Trigger: TCTCCATCTCTTCAGTTGGCATTTATTGAGAGTTTT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTTCATTTATTGGTGTaGAAGAAACCAAGATATCAG +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLHLLV*KKPRYQ
Trigger: CTGATATCTTGGTTTCTTCCACACCAATAAATGAAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTCTAGCTGGGCTTCCAAGATCTTTCTCTTaGCGTTCTACCATGGAATTT +
Preference number: 4 (lower is better)
Translates to: CSHPPVYTAYFSLILAGLPRSFS*RSTMEF
Trigger: AAATTCCATGGTAGAACGCCAAGAGAAAGATCTTGG...AAGCCCAGCTAGAATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCAATTCTGTGACTCCATaGAAGACATCTGAATTTTGT +
Preference number: 4 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELNSVTP*KTSEFC
Trigger: ACAAAATTCAGATGTCTTCCATGGAGTCACAGAATT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAACCACTGGACTCTTCTaGATGGTCTGGACATCAGTT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRTTGLF*MVWTSV
Trigger: AACTGATGTCCAGACCATTCAGAAGAGTCCAGTGGT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATGCCAGAGTTTCCCCTaGAACACACAAAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRCQSFP*NTQRRV
Trigger: GACTCTTCTTTGTGTGTTTCAGGGGAAACTCTGGCA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTGTCTCGAGCTCGCTaGGCTCTCACTTATTACACT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLSRAR*ALTYYT
Trigger: AGTGTAATAAGTGAGAGCTCAGCGAGCTCGAGACAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATATTCATCATCTGAATTaGTTTCACTTACACTCCGGC +
Preference number: 4 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDIHHLN*FHLHSG
Trigger: GCCGGAGTGTAAGTGAAATCAATTCAGATGATGAAT...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATCATCCATGTCTACCTaGAGACGGCCAAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSSMST*RRPRSF
Trigger: GAAAGATCTTGGCCGTCTTCAGGTAGACATGGATGA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACTAAGGTCCCCCACTTaGATGGCTAATGTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLRSPT*MANVSC
Trigger: GCAAGAAACATTAGCCATTCAAGTGGGGGACCTTAG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR GCA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTAACTGGCTTTGTGATTaGTTTAGGAGAGGCTATTGG +
Preference number: 4 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSNWLCD*FRRGYW
Trigger: CCAATAGCCTCTCCTAAAGCAATCACAAAGCCAGTT...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATACTTTCTTCCATTTCTaGTTCCTCAGTGGGTATAAC +
Preference number: 4 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDTFFHF*FLSGYN
Trigger: GTTATACCCACTGAGGAAGCAGAAATGGAAGAAAGT...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTTCTCAACCTCTTCTTTaGCATCAAGGACCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSSQPLL*HQGPVS
Trigger: TGAAACAGGTCCTTGATGGCAAAGAAGAGGTTGAGA...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGAGTTCTTCTGTAGCTaGACGTTCTCTCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYREFFCS*TFSLNC
Trigger: GCAGTTGAGAGAGAACGTGCAGCTACAGAAGAACTC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAAGGAGAGGCTATTGGTaGACTCTGAGGTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRRRGYW*TLRFSV
Trigger: AACACTGAACCTCAGAGTCCACCAATAGCCTCTCCT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACACAGTCCTCCGAACTaGCTTTGTGATTGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRHSPPN*LCDCFR
Trigger: CCTAAAGCAATCACAAAGCCAGTTCGGAGGACTGTG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACTCAGAAAGTGCTTCTaGCTGACTTTCAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLRKCF*LTFSRF
Trigger: GAACCTGCTGAAAGTCAGCCAGAAGCACTTTCTGAG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGGTCCCCCACTTGAATaGCTAATGTTTCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRGPPLE*LMFLAA
Trigger: AGCAGCAAGAAACATTAGCCATTCAAGTGGGGGACC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR CCA 90 bp TGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTCTAGCTGGGCTTTTTTCCAATTCAACCTaGTACCTATTGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: CSHPPVYTAYFSLILAGLFSNST*YLLFSS
Trigger: GGATGAGAACAATAGGTACCAGGTTGAATTGGAAAA...AAGCCCAGCTAGAATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000488010.5
3UTR CAA 72 bp GTAAGAAATGGTAGACTCAGTTTAGCCTCCCAAGAATaGGAAGGACATCTACAGTCTGTGCTTAATTGTCTA +
Preference number: 4 (lower is better)
Translates to: VRNGRLSLASQE*EGHLQSVLNCL
Trigger: TAGACAATTAAGCACAGACTGTAGATGTCCTTCCAATTCTTGGGAGGCTAAACTGAGTCTACCATTTCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGCTATTGGTGGACTCTaGGGTTCAGTGTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRAIGGL*GSVFDF
Trigger: GAAATCAAACACTGAACCTCAGAGTCCACCAATAGC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTTTGCTGGAGGTTTTaGTACCACTGGACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRFCWRF*YHWTLL
Trigger: CAGAAGAGTCCAGTGGTATCAAAACCTCCAGCAAAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGATGCAGAGAGAAGCTaGAAAGATGTCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRDAERS*KDVCIK
Trigger: CTTGATGCAGACATCTTTTCAGCTTCTCTCTGCATC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAAGGCATTGGTCCAAATaGGTGATCATGAGACTCATC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRRHWSK*VIMRLI
Trigger: GATGAGTCTCATGATCACTCATTTGGACCAATGCCT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGCACCTGGCCGTAAATaGGAGTTTTTATGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRAPGRK*EFLCAS
Trigger: ACTTGCACATAAAAACTCTCATTTACGGCCAGGTGC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACTTGACTGGCCAATGTaGAAGGATTCATGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLDWPM*KDSCKL
Trigger: CAGCTTACATGAATCCTTGCACATTGGCCAGTCAAG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGAGGAGAAGGTGTATTaGTCTGCCTGTCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYREEKVY*SACLHV
Trigger: AACATGAAGACAGGCAGAGCAATACACCTTCTCCTC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTCCTTCTCAGAAAGTaGTTCTGGCTGACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRFLLRK*FWLTFS
Trigger: GCTGAAAGTCAGCCAGAAGCACTTTCTGAGAAGGAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAAGTAAGTTCTTTGTATaGACTATCCAGGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSKFFV*TIQGSL
Trigger: CAGGCTGCCCTGGATAGTGCATACAAAGAACTTACT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTTAGGAGAGGCTATTaGTGGACTCTGAGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRFRRGY*WTLRFS
Trigger: ACTGAACCTCAGAGTCCACCAATAGCCTCTCCTAAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATCAGGAGTTCTTGACTaGCCAATGTGCAAGGATTCA +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSGVLD*PMCKDS
Trigger: TGAATCCTTGCACATTGGCCAGTCAAGAACTCCTGA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAAATAATCCTCCTTTCTaGCAGCCGCTTGTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRNNPPF*QPLVLY
Trigger: GTACAGAACAAGCGGCTGCCAGAAAGGAGGATTATT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp TGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTCTAGCTGGGCTTAATTCTGTGACTCCATaGAAGACATCTGAATTTTGT +
Preference number: 4 (lower is better)
Translates to: CSHPPVYTAYFSLILAGLNSVTP*KTSEFC
Trigger: ACAAAATTCAGATGTCTTCCATGGAGTCACAGAATT...AAGCCCAGCTAGAATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACGATTTTGCTTTCTGTaGTTTCGGTTACTCACGGTC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRRFCFL*FRLLTV
Trigger: GACCGTGAGTAACCGAAACCACAGAAAGCAAAATCG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTCAAAAGCATCAGATaGACAGCAACTCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRFKSIR*TATLSE
Trigger: CTCACTGAGAGTTGCTGTTCATCTGATGCTTTTGAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTGCTTCTGCAATTCTTTaGGTAAACTCATCTTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSASAIL*VNSSFK
Trigger: CTTGAAAGATGAGTTTACTCAAAGAATTGCAGAAGC...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGTTGATGAAACACTTTaGCTCAGTTCCTGGTTTCGA +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRVDETL*LSSWFR
Trigger: TCGAAACCAGGAACTGAGTCAAAGTGTTTCATCAAC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGATTCTAGCTGGGCTTaGAATCTACTGTTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRDSSWA*NLLFSC
Trigger: ACAGGAAAACAGTAGATTTCAAGCCCAGCTAGAATC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATATGTCCTTTGTTTCTaGTGTGAGAGACTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRYVLCF*CERLRR
Trigger: TCTACGCAGTCTCTCACAGCAGAAACAAAGGACATA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAACAGTTAACAGGAGTTaGACTTCGTCCACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRTVNRS*TSSTFF
Trigger: GAAGAAAGTGGACGAAGTGCAACTCCTGTTAACTGT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACAGCATCTCTCTCTTTaGAGGCTAGTTGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRQHLSL*RLVELS
Trigger: AGAAAGTTCAACTAGCCTGCAAAGAGAGAGATGCTG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAACCTGTTTCAAATGCTaGAACTCCTCTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRTCFKC*NSSSSS
Trigger: AGAGCTAGAAGAGGAGTTGCAGCATTTGAAACAGGT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACTGGGATCCCAGGGTTaGTTGCAAATTTTCTATTTG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLGSQG*LQIFYL
Trigger: CAAATAGAAAATTTGCAAGCAACCCTGGGATCCCAG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATGTCTATACTATCCATaGTTTCAGACGTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRCLYYP*FQTFTG
Trigger: CCCAGTGAACGTCTGAAACCATGGATAGTATAGACA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGCGAGAGAAAGGCACTaGAGAAATTTTCAGATTCAT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRARERH*RNFQIH
Trigger: ATGAATCTGAAAATTTCTTCAGTGCCTTTCTCTCGC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAATTCATCATCTGAATTaGTTTCACTTACACTCCGGC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRIHHLN*FHLHSG
Trigger: GCCGGAGTGTAAGTGAAATCAATTCAGATGATGAAT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATCCATGGAAGACATCTaGATTTTGTTAGCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSMEDI*ILLARS
Trigger: ACTCCTTGCTAACAAAATTCAGATGTCTTCCATGGA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATCTGCTGTGAGAGACTaGGTAGACGTATTAGATATA +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSAVRD*VDVLDI
Trigger: TATATCTAATACGTCTACGCAGTCTCTCACAGCAGA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACTAAAGCATATCCCTTaGCTGACAATTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLKHIP*LTIHHL
Trigger: CAGATGATGAATTGTCAGGCAAGGGATATGCTTTAG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAACTTTCTTCCATTTCTaGTTCCTCAGTGGGTATAAC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRTFFHF*FLSGYN
Trigger: GTTATACCCACTGAGGAAGCAGAAATGGAAGAAAGT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACCTTATCCACGATTTTaGTTTCTGTGGTTTCGGTTA +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRPYPRF*FLWFRL
Trigger: TAACCGAAACCACAGAAAGCAAAATCGTGGATAAGG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACTGTTAGAGTTACCTTaGAAACATCTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLLELP*KHLPSQ
Trigger: CTGAGAAGGAAGATGTTTGCAAGGTAACTCTAACAG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAATGTACAGGTTTCTCTaGATAGGTACCAAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRMYRFL*IGTKRY
Trigger: GTACCTTTTGGTACCTATCCAGAGAAACCTGTACAT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGCTTCTGCAATTCTTTaGGTAAACTCATCTTTCAAG +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRASAIL*VNSSFK
Trigger: CTTGAAAGATGAGTTTACTCAAAGAATTGCAGAAGC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR TCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACAGTCTGATTACAGGTaGGTACAGTACAATAAGATA +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRQSDYR*VQYNKI
Trigger: TATCTTATTGTACTGTACTCACCTGTAATCAGACTG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTAACAGTTTCTTCGTaGTTGCCTTCAGTTTTAGGT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLTVSS*LPSVLG
Trigger: ACCTAAAACTGAAGGCAAGCACGAAGAAACTGTTAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTTCAAACTTACAGTTaGCACCTTCATATCCGATTC +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRFQTYS*HLHIRF
Trigger: GAATCGGATATGAAGGTGCCAACTGTAAGTTTGAAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACTGTCCTTCATTTATTaGTGTGGAAGAAACCAAGAT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLSFIY*CGRNQD
Trigger: ATCTTGGTTTCTTCCACACCAATAAATGAAGGACAG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGCTAGAAACAGAAAATaGCTTGCGTTCCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRARNRK*LAFLFF
Trigger: AAAGAAAAGGAACGCAAGCCATTTTCTGTTTCTAGC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAATGATGTTAGAATTGTaGAGCTGCTGTTTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRMMLEL*SCCFES
Trigger: ACTTTCAAAACAGCAGCTGCACAATTCTAACATCAT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR GCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAAAAACTCTCAATAAATaGCAACTGAAGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRKTLNK*QLKRWR
Trigger: TCTCCATCTCTTCAGTTGGCATTTATTGAGAGTTTT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR CCA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAAATTCTGTGACTCCATaGAAGACATCTGAATTTTGT +
Preference number: 4 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRNSVTP*KTSEFC
Trigger: ACAAAATTCAGATGTCTTCCATGGAGTCACAGAATT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS TCA 90 bp CCTCCCGCGAGCCCGGGATGTTACCCTCGGCCGTTCCCGCACAGCTaGGACGAAGGGGGCCCATGTGCGCATGCGCTTGCTTCTTCCACG +
Preference number: 5 (lower is better)
Translates to: PPASPGCYPRPFPHS*DEGGPCAHALASST
Trigger: CGTGGAAGAAGCAAGCGCATGCGCACATGGGCCCCCTTCGTCTCAGCTGTGCGGGAACGGCCGAGGGTAACATCCCGGGCTCGCGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS GCA 90 bp TCGGCCGTTCCCGCACAGCTGAGACGAAGGGGGCCCATGTGCGCATaGGCTTGCTTCTTCCACGTACACAGCAACCAAATCTACGAGCCC +
Preference number: 5 (lower is better)
Translates to: SAVPAQLRRRGPMCA*ACFFHVHSNQIYEP
Trigger: GGGCTCGTAGATTTGGTTGCTGTGTACGTGGAAGAAGCAAGCGCATGCGCACATGGGCCCCCTTCGTCTCAGCTGTGCGGGAACGGCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646304.1
CDS GCA 90 bp ATGTCCAGAACCCTGTCAATAGACTTCTGGGCCTGGGACAGGGCCTaGTTAGCGAAGCTGGAGAGCTGGGAGGCGTTGAACCAACTCATC +
Preference number: 5 (lower is better)
Translates to: MSRTLSIDFWAWDRA*LAKLESWEALNQLI
Trigger: GATGAGTTGGTTCAACGCCTCCCAGCTCTCCAGCTTCGCTAAGCAGGCCCTGTCCCAGGCCCAGAAGTCTATTGACAGGGTTCTGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGGAGAGCTGGGAGGCGTaGAACCAACTCATCGCCCCT +
Preference number: 5 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWESWEA*NQLIAP
Trigger: AGGGGCGATGAGTTGGTTCAACGCCTCCCAGCTCTC...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCATGTGCGCATGCGCTaGCTTCTTCCACGTACACAG +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELHVRMR*LLPRTQ
Trigger: CTGTGTACGTGGAAGAAGCAAGCGCATGCGCACATG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS GCA 90 bp AGCAAGGAGTTCTTCTGTAGCTGCACGTTCTCTCTCAACTGCTGCTaGCAGCAAGGTCTGGGATTCACCAAGCCTATCAGAAAGATTCTT +
Preference number: 5 (lower is better)
Translates to: SKEFFCSCTFSLNCC*QQGLGFTKPIRKIL
Trigger: AAGAATCTTTCTGATAGGCTTGGTGAATCCCAGACCTTGCTGGCAGCAGCAGTTGAGAGAGAACGTGCAGCTACAGAAGAACTCCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS GCA 90 bp GTTAGCAAGGAGTTCTTCTGTAGCTGCACGTTCTCTCTCAACTGCTaGTGCCAGCAAGGTCTGGGATTCACCAAGCCTATCAGAAAGATT +
Preference number: 5 (lower is better)
Translates to: VSKEFFCSCTFSLNC*CQQGLGFTKPIRKI
Trigger: AATCTTTCTGATAGGCTTGGTGAATCCCAGACCTTGCTGGCAGCAGCAGTTGAGAGAGAACGTGCAGCTACAGAAGAACTCCTTGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS GCA 90 bp TTTGTTAGCAAGGAGTTCTTCTGTAGCTGCACGTTCTCTCTCAACTaGTGCTGCCAGCAAGGTCTGGGATTCACCAAGCCTATCAGAAAG +
Preference number: 5 (lower is better)
Translates to: FVSKEFFCSCTFSLN*CCQQGLGFTKPIRK
Trigger: CTTTCTGATAGGCTTGGTGAATCCCAGACCTTGCTGGCAGCAGCAGTTGAGAGAGAACGTGCAGCTACAGAAGAACTCCTTGCTAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCACTGCTCAGCCACCTaGTCTAACACAGTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELHCSAT*SNTVCP
Trigger: AGGACAGACTGTGTTAGACAAGGTGGCTGAGCAGTG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp GAACTTGAGCGTGACATGGTGGGAGTGCTAGAAACAGAAAATGGCTTGCGTTCCGTGCCTCACTATCCTTaGCAGCATTGGCTTTGTGAA +
Preference number: 5 (lower is better)
Translates to: ELERDMVGVLETENGLRSVPHYP*QHWLCE
Trigger: TTCACAAAGCCAATGCTGCAAAGGATAGTGAGGCAC...GGAACGCAAGCCATTTTCTGTTTCTAGCACTCCCACCATGTCACGCTCAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS TCA 90 bp GACTCTTCTGAATGGTCTGGACATCAGTTGGCGAGAGAAAGGCACTaGAGAAATTTTCAGATTCATCGACCACAGTCCTCCGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: DSSEWSGHQLARERH*RNFQIHRPQSSELA
Trigger: AGCCAGTTCGGAGGACTGTGGTCGATGAATCTGAAAATTTCTTCAGTGCCTTTCTCTCGCCAACTGATGTCCAGACCATTCAGAAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS GCA 90 bp CATGGAAGACATCTGAATTTTGTTAGCAAGGAGTTCTTCTGTAGCTaGACGTTCTCTCTCAACTGCTGCTGCCAGCAAGGTCTGGGATTC +
Preference number: 5 (lower is better)
Translates to: HGRHLNFVSKEFFCS*TFSLNCCCQQGLGF
Trigger: GAATCCCAGACCTTGCTGGCAGCAGCAGTTGAGAGAGAACGTGCAGCTACAGAAGAACTCCTTGCTAACAAAATTCAGATGTCTTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS CCA 90 bp GGCACTGAAGAAATTTTCAGATTCATCGACCACAGTCCTCCGAACTaGCTTTGTGATTGCTTTAGGAGAGGCTATTGGTGGACTCTGAGG +
Preference number: 5 (lower is better)
Translates to: GTEEIFRFIDHSPPN*LCDCFRRGYWWTLR
Trigger: CCTCAGAGTCCACCAATAGCCTCTCCTAAAGCAATCACAAAGCCAGTTCGGAGGACTGTGGTCGATGAATCTGAAAATTTCTTCAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCATTTCAACCCCCAGGTaGAAGTATCCCATCCTCCAC +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELISTPR*KYPILH
Trigger: GTGGAGGATGGGATACTTCAACCTGGGGGTTGAAAT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGCACCACTTATTGAACTaGAGCGTGACATGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SVVLPYQHHLLNLSVTWWHHLLN*SVTWWE
Trigger: CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTG...CCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCACCACTTATTGAACTaGAGCGTGACATGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELHHLLN*SVTWWE
Trigger: CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTGCAGTGGCACAATCTaGGCTCATTGTAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELCSGTI*AHCNLH
Trigger: GTGGAGGTTACAATGAGCCAAGATTGTGCCACTGCA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS TCA 90 bp GGTCGTTGTGATTTTGCTGGAGGTTTTGATACCACTGGACTCTTCTaGATGGTCTGGACATCAGTTGGCGAGAGAAAGGCACTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: GRCDFAGGFDTTGLF*MVWTSVGERKALKK
Trigger: TTTCTTCAGTGCCTTTCTCTCGCCAACTGATGTCCAGACCATTCAGAAGAGTCCAGTGGTATCAAAACCTCCAGCAAAATCACAACGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS TCA 90 bp TCAACTGTCTTGCAAACATCTTCCTTCTCAGAAAGTGCTTCTGGCTaGCTTTCAGCAGGTTCACACTGCTCAGCCACCTTGTCTAACACA +
Preference number: 5 (lower is better)
Translates to: STVLQTSSFSESASG*LSAGSHCSATLSNT
Trigger: TGTGTTAGACAAGGTGGCTGAGCAGTGTGAACCTGCTGAAAGTCAGCCAGAAGCACTTTCTGAGAAGGAAGATGTTTGCAAGACAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
CDS TCA 90 bp AGAGTTACCTTGCAAACATCTTCCTTCTCAGAAAGTGCTTCTGGCTaGCTTTCAGCAGGTTCACACTGCTCAGCCACCTTGTCTAACACA +
Preference number: 5 (lower is better)
Translates to: RVTLQTSSFSESASG*LSAGSHCSATLSNT
Trigger: TGTGTTAGACAAGGTGGCTGAGCAGTGTGAACCTGCTGAAAGTCAGCCAGAAGCACTTTCTGAGAAGGAAGATGTTTGCAAGGTAACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTCTGAGGTTCAGTGTTaGATTTCAACCCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELSEVQC*ISTPRL
Trigger: CAACCTGGGGGTTGAAATCAAACACTGAACCTCAGA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGCTGGTCGTTGTGATTTaGCTGGAGGTTTTGATACCA +
Preference number: 5 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWELVVVI*LEVLIP
Trigger: TGGTATCAAAACCTCCAGCAAAATCACAACGACCAG...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp TCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGTTGTTTCAGGAGTTCTaGACTGGCCAATGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: SVVLPYQHHLLNLSVTWWLFQEF*TGQCAR
Trigger: CCTTGCACATTGGCCAGTCAAGAACTCCTGAAACAA...CCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTGTTTCAGGAGTTCTaGACTGGCCAATGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLFQEF*TGQCAR
Trigger: CCTTGCACATTGGCCAGTCAAGAACTCCTGAAACAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp GTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTGGGAGGCCAAGATCTTTCTCTaGGCGTTCTACCATGGAATT +
Preference number: 5 (lower is better)
Translates to: VVLPYQHHLLNLSVTWWEAKIFL*AFYHGI
Trigger: AATTCCATGGTAGAACGCCAAGAGAAAGATCTTGGC...CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATCTTTCTGGCAGCCGCTaGTTCTGTACGCTGCAATGC +
Preference number: 5 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDLSGSR*FCTLQC
Trigger: GCATTGCAGCGTACAGAACAAGCGGCTGCCAGAAAG...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS TCA 90 bp TCACAGCTCAGTGACTTCCCTTTATTCTGTTGGGAAAGAGCTGCTTaGAAGGAGGAGGGATTCTCTGCTCCTAGATGCTTATGTCTTATG +
Preference number: 5 (lower is better)
Translates to: SQLSDFPLFCWERAA*KEEGFSAPRCLCLM
Trigger: CATAAGACATAAGCATCTAGGAGCAGAGAATCCCTCCTCCTTTCAAGCAGCTCTTTCCCAACAGAATAAAGGGAAGTCACTGAGCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645406.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGAGAGCTGGGAGGCGTaGAACCAACTCATCGCCCCT +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRESWEA*NQLIAP
Trigger: AGGGGCGATGAGTTGGTTCAACGCCTCCCAGCTCTC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTCTGAGGTTCAGTGTTaGATTTCAACCCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWSEVQC*ISTPRL
Trigger: CAACCTGGGGGTTGAAATCAAACACTGAACCTCAGA...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTGGTCGTTGTGATTTaGCTGGAGGTTTTGATACCA +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLVVVI*LEVLIP
Trigger: TGGTATCAAAACCTCCAGCAAAATCACAACGACCAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTCTCAACCTCTTCTTaGCCATCAAGGACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELFSTSS*PSRTCF
Trigger: GAAACAGGTCCTTGATGGCAAAGAAGAGGTTGAGAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGCCAAGATCTTTCTCTaGGCGTTCTACCATGGAATT +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELAKIFL*AFYHGI
Trigger: AATTCCATGGTAGAACGCCAAGAGAAAGATCTTGGC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTAGCCTCCCAAGAATaGGAAGGACATCTACAGTCT +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLASQE*EGHLQS
Trigger: AGACTGTAGATGTCCTTCCAATTCTTGGGAGGCTAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS GCA 90 bp ATTCAGAAATTCAACTGTCTTGCAAACATCTTCCTTCTCAGAAAGTaGTTCTGGCTGACTTTCAGCAGGTTCACACTGCTCAGCCACCTT +
Preference number: 5 (lower is better)
Translates to: IQKFNCLANIFLLRK*FWLTFSRFTLLSHL
Trigger: AAGGTGGCTGAGCAGTGTGAACCTGCTGAAAGTCAGCCAGAAGCACTTTCTGAGAAGGAAGATGTTTGCAAGACAGTTGAATTTCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
CDS GCA 90 bp TTTCATTTCACGGCTCAGAGCAGCTTCCTGTGCCTCACTATCCTTTaGAGCATTGGCTTTGTGAAGATCAGTAAGTTCTTTGTATGCACT +
Preference number: 5 (lower is better)
Translates to: FHFTAQSSFLCLTIL*SIGFVKISKFFVCT
Trigger: AGTGCATACAAAGAACTTACTGATCTTCACAAAGCCAATGCTGCAAAGGATAGTGAGGCACAGGAAGCTGCTCTGAGCCGTGAAATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCACAGTTTCTTCGTGCTaGCCTTCAGTTTTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELTVSSC*PSVLGD
Trigger: ATCACCTAAAACTGAAGGCAAGCACGAAGAAACTGT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCCTGTCTTCATGTTTTaGTTCCTTAGGTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELPVFMF*FLRFQS
Trigger: GCTTTGGAACCTAAGGAACAAAAACATGAAGACAGG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTCACTGCTCAGCCACCTaGTCTAACACAGTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSHCSAT*SNTVCP
Trigger: AGGACAGACTGTGTTAGACAAGGTGGCTGAGCAGTG...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTCTGGGATCCCAGGGTaGCTTGCAAATTTTCTATTT +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELSGIPG*LANFLF
Trigger: AAATAGAAAATTTGCAAGCAACCCTGGGATCCCAGA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTCAACCTGGTACCTATaGTTCTCATCCTCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELSTWYL*FSSSSL
Trigger: TAAACTGGAGGATGAGAACAATAGGTACCAGGTTGA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTATCAACACCACTTATaGAACTTGAGCGTGACATGG +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELYQHHL*NLSVTW
Trigger: CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS GCA 90 bp TTTCAGGAGTTCTTGACTGGCCAATGTGCAAGGATTCATGTAAGCTaGTTTTCACTTCTTCTTCTGGTCGTTGTGATTTTGCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: FQEFLTGQCARIHVS*FSLLLLVVVILLEV
Trigger: AACCTCCAGCAAAATCACAACGACCAGAAGAAGAAGTGAAAAGCAGCTTACATGAATCCTTGCACATTGGCCAGTCAAGAACTCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACATGTGCGCATGCGCTaGCTTCTTCCACGTACACAG +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRHVRMR*LLPRTQ
Trigger: CTGTGTACGTGGAAGAAGCAAGCGCATGCGCACATG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCTTTCAAACTTACAGTaGGCACCTTCATATCCGATT +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLSNLQ*APSYPI
Trigger: AATCGGATATGAAGGTGCCAACTGTAAGTTTGAAAG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGCCTGTCTTCATGTTTTaGTTCCTTAGGTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWPVFMF*FLRFQS
Trigger: GCTTTGGAACCTAAGGAACAAAAACATGAAGACAGG...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGAGATCAGTAAGTTCTTaGTATGCACTATCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWRSVSS*YALSRA
Trigger: TGCCCTGGATAGTGCATACAAAGAACTTACTGATCT...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACTTTCTGGCAGCCGCTaGTTCTGTACGCTGCAATGC +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLSGSR*FCTLQC
Trigger: GCATTGCAGCGTACAGAACAAGCGGCTGCCAGAAAG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCGAAGCAATGGTCTTGTaGTTGATGAAACACTTTGAC +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELEAMVL*LMKHFD
Trigger: GTCAAAGTGTTTCATCAACAACAAGACCATTGCTTC...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCCCTGTCATTCTGCCCTaGAATATTACACACACAAAA +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELPVILP*NITHTK
Trigger: TTTTGTGTGTGTAATATTCAAGGGCAGAATGACAGG...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCACTGTTAGAGTTACCTaGCAAACATCTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELTVRVT*QTSSFS
Trigger: TGAGAAGGAAGATGTTTGCAAGGTAACTCTAACAGT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646708.1
CDS TCA 90 bp TTTTCTATTTGTCGAAGCAATGGTCTTGTTGTTGATGAAACACTTTaGCTCAGTTCCTGGTTTCGATTCTCTGCTTCCTGGAGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: FSICRSNGLVVDETL*LSSWFRFSASWSLC
Trigger: GCAGAGACTCCAGGAAGCAGAGAATCGAAACCAGGAACTGAGTCAAAGTGTTTCATCAACAACAAGACCATTGCTTCGACAAATAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS GCA 90 bp ACAGTTGGCACCTTCATATCCGATTCTTTATTAACAGTTTCTTCGTaGTTGCCTTCAGTTTTAGGTGATGAAGTACCTGCTGCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: TVGTFISDSLLTVSS*LPSVLGDEVPAARV
Trigger: AACTCTGGCAGCAGGTACTTCATCACCTAAAACTGAAGGCAAGCACGAAGAAACTGTTAATAAAGAATCGGATATGAAGGTGCCAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CCA 90 bp AGCCTATCAGAAAGATTCTTCTCTAATTTCTCCCACGACGATGTCTaGGATCCCAGGGTTGCTTGCAAATTTTCTATTTGTCGAAGCAAT +
Preference number: 5 (lower is better)
Translates to: SLSERFFSNFSHDDV*DPRVACKFSICRSN
Trigger: ATTGCTTCGACAAATAGAAAATTTGCAAGCAACCCTGGGATCCCAGACATCGTCGTGGGAGAAATTAGAGAAGAATCTTTCTGATAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTACTTGTGATTCAGTaGTTTCAGGAGTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELLLVIQ*FQEFLT
Trigger: AGTCAAGAACTCCTGAAACAACTGAATCACAAGTAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCAGAAATTCAACTGTCTaGCAAACATCTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELRNSTV*QTSSFS
Trigger: TGAGAAGGAAGATGTTTGCAAGACAGTTGAATTTCT...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR CAA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTTCTCAACCTCTTCTTaGCCATCAAGGACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDFSTSS*PSRTCF
Trigger: GAAACAGGTCCTTGATGGCAAAGAAGAGGTTGAGAA...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp TTTTTAGTAGAGATGGGGTTTCACCAAACTGCTGGCCATGCTGGTCTTGAACTCTTCTATTTGCAGTTATaGTTTATCTCTTGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: FLVEMGFHQTAGHAGLELFYLQL*FISCCP
Trigger: GGGACAGCAAGAGATAAACAATAACTGCAAATAGAA...GAGTTCAAGACCAGCATGGCCAGCAGTTTGGTGAAACCCCATCTCTACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR CAA 90 bp ATGTCTGTAGTCCTGCCATATCAACACCACTTATTGAACTTGAGCGTGACATGGTTACTTGTGATTCAGTaGTTTCAGGAGTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: MSVVLPYQHHLLNLSVTWLLVIQ*FQEFLT
Trigger: AGTCAAGAACTCCTGAAACAACTGAATCACAAGTAA...CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATATGGCAGGACTACAGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTCAACCTGGTACCTATaGTTCTCATCCTCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDSTWYL*FSSSSL
Trigger: TAAACTGGAGGATGAGAACAATAGGTACCAGGTTGA...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACACCACTTATTGAACTaGAGCGTGACATGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRHHLLN*SVTWWE
Trigger: CTCCCACCATGTCACGCTCAAGTTCAATAAGTGGTG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp ACCTGGTACCTATTGTTCTCATCCTCCAGTTTACACAGCCTATTTTTCTCTGATTATCAACACCACTTATaGAACTTGAGCGTGACATGG +
Preference number: 5 (lower is better)
Translates to: TWYLLFSSSSLHSLFFSDYQHHL*NLSVTW
Trigger: CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATA...ATCAGAGAAAAATAGGCTGTGTAAACTGGAGGATGAGAACAATAGGTACCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATGCAGTGGCACAATCTaGGCTCATTGTAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRCSGTI*AHCNLH
Trigger: GTGGAGGTTACAATGAGCCAAGATTGTGCCACTGCA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATCTGAGGTTCAGTGTTaGATTTCAACCCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSEVQC*ISTPRL
Trigger: CAACCTGGGGGTTGAAATCAAACACTGAACCTCAGA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTGTTTCAGGAGTTCTaGACTGGCCAATGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLFQEF*TGQCAR
Trigger: CCTTGCACATTGGCCAGTCAAGAACTCCTGAAACAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTACAGTTTCTTCGTGCTaGCCTTCAGTTTTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSTVSSC*PSVLGD
Trigger: ATCACCTAAAACTGAAGGCAAGCACGAAGAAACTGT...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGTGCCTCACTATCCTTaGCAGCATTGGCTTTGTGAA +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRVPHYP*QHWLCE
Trigger: TTCACAAAGCCAATGCTGCAAAGGATAGTGAGGCAC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACTGGTCGTTGTGATTTaGCTGGAGGTTTTGATACCA +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLVVVI*LEVLIP
Trigger: TGGTATCAAAACCTCCAGCAAAATCACAACGACCAG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTCTTTCAAACTTACAGTaGGCACCTTCATATCCGATT +
Preference number: 5 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSLSNLQ*APSYPI
Trigger: AATCGGATATGAAGGTGCCAACTGTAAGTTTGAAAG...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTCTCAACCTCTTCTTaGCCATCAAGGACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRFSTSS*PSRTCF
Trigger: GAAACAGGTCCTTGATGGCAAAGAAGAGGTTGAGAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGCCAAGATCTTTCTCTaGGCGTTCTACCATGGAATT +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRAKIFL*AFYHGI
Trigger: AATTCCATGGTAGAACGCCAAGAGAAAGATCTTGGC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAACAGTTTCTTCGTGCTaGCCTTCAGTTTTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRTVSSC*PSVLGD
Trigger: ATCACCTAAAACTGAAGGCAAGCACGAAGAAACTGT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACCTGTCTTCATGTTTTaGTTCCTTAGGTTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRPVFMF*FLRFQS
Trigger: GCTTTGGAACCTAAGGAACAAAAACATGAAGACAGG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp TCATCTTTTAGGTTTTCCAATTCAACCTGGTACCTATTGTTCTCATCCTCCAGTAGAAATTCAACTGTCTaGCAAACATCTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SSFRFSNSTWYLLFSSSSRNSTV*QTSSFS
Trigger: TGAGAAGGAAGATGTTTGCAAGACAGTTGAATTTCT...ACTGGAGGATGAGAACAATAGGTACCAGGTTGAATTGGAAAACCTAAAAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488010.5
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAAGATCAGTAAGTTCTTaGTATGCACTATCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRRSVSS*YALSRA
Trigger: TGCCCTGGATAGTGCATACAAAGAACTTACTGATCT...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATCTGGGATCCCAGGGTaGCTTGCAAATTTTCTATTT +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSGIPG*LANFLF
Trigger: AAATAGAAAATTTGCAAGCAACCCTGGGATCCCAGA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATCAACCTGGTACCTATaGTTCTCATCCTCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRSTWYL*FSSSSL
Trigger: TAAACTGGAGGATGAGAACAATAGGTACCAGGTTGA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATATCAACACCACTTATaGAACTTGAGCGTGACATGG +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRYQHHL*NLSVTW
Trigger: CCATGTCACGCTCAAGTTCAATAAGTGGTGTTGATA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS CCA 90 bp ATTCTTTCAAAAGCATCAGATGAACAGCAACTCTCAGTGAGTTTTTaGAAATCATCTAAACGATTATATTCAGGACAAGCAGATGCAGAG +
Preference number: 5 (lower is better)
Translates to: ILSKASDEQQLSVSF*KSSKRLYSGQADAE
Trigger: CTCTGCATCTGCTTGTCCTGAATATAATCGTTTAGATGATTTCCAAAAACTCACTGAGAGTTGCTGTTCATCTGATGCTTTTGAAAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACTTTCAAACTTACAGTaGGCACCTTCATATCCGATT +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLSNLQ*APSYPI
Trigger: AATCGGATATGAAGGTGCCAACTGTAAGTTTGAAAG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGAGAAGCAATGGTCTTGTaGTTGATGAAACACTTTGAC +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYREAMVL*LMKHFD
Trigger: GTCAAAGTGTTTCATCAACAACAAGACCATTGCTTC...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGACCTGTCATTCTGCCCTaGAATATTACACACACAAAA +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRPVILP*NITHTK
Trigger: TTTTGTGTGTGTAATATTCAAGGGCAGAATGACAGG...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS TCA 90 bp ATGAGTCTATTCTTTCAAAAGCATCAGATGAACAGCAACTCTCAGTaGGTTTTTGGAAATCATCTAAACGATTATATTCAGGACAAGCAG +
Preference number: 5 (lower is better)
Translates to: MSLFFQKHQMNSNSQ*VFGNHLNDYIQDKQ
Trigger: CTGCTTGTCCTGAATATAATCGTTTAGATGATTTCCAAAAACTCACTGAGAGTTGCTGTTCATCTGATGCTTTTGAAAGAATAGACTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTACTTGTGATTCAGTaGTTTCAGGAGTTCTTGACT +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRLLVIQ*FQEFLT
Trigger: AGTCAAGAACTCCTGAAACAACTGAATCACAAGTAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS-3UTR CAA 90 bp AATATGTACAGGTTTCTCTGGATAGGTACCAAAAGGTACCACATTTTATACAGATTCTATTTGCAGTTATaGTTTATCTCTTGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: NMYRFLWIGTKRYHILYRFYLQL*FISCCP
Trigger: GGGACAGCAAGAGATAAACAATAACTGCAAATAGAA...TCTGTATAAAATGTGGTACCTTTTGGTACCTATCCAGAGAAACCTGTACATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398559.7
ENST00000646304.1
CDS CAA 90 bp GCCTGGGACAGGGCCTGCTTAGCGAAGCTGGAGAGCTGGGAGGCGTaGAACCAACTCATCGCCCCTCCTCAGCCGGCAGTGGCGGCGGCA +
Preference number: 6 (lower is better)
Translates to: AWDRACLAKLESWEA*NQLIAPPQPAVAAA
Trigger: TGCCGCCGCCACTGCCGGCTGAGGAGGGGCGATGAGTTGGTTCAACGCCTCCCAGCTCTCCAGCTTCGCTAAGCAGGCCCTGTCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS TCA 72 bp AGCCCGGGATGTTACCCTCGGCCGTTCCCGCACAGCTaGGACGAAGGGGGCCCATGTGCGCATGCGCTTGCT +
Preference number: 6 (lower is better)
Translates to: SPGCYPRPFPHS*DEGGPCAHALA
Trigger: AGCAAGCGCATGCGCACATGGGCCCCCTTCGTCTCAGCTGTGCGGGAACGGCCGAGGGTAACATCCCGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS CCA 72 bp GCCTGGGACAGGGCCTGCTTAGCGAAGCTGGAGAGCTaGGAGGCGTTGAACCAACTCATCGCCCCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: AWDRACLAKLES*EALNQLIAPPQ
Trigger: CTGAGGAGGGGCGATGAGTTGGTTCAACGCCTCCCAGCTCTCCAGCTTCGCTAAGCAGGCCCTGTCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CAA 72 bp AGGGCCTGCTTAGCGAAGCTGGAGAGCTGGGAGGCGTaGAACCAACTCATCGCCCCTCCTCAGCCGGCAGTG +
Preference number: 6 (lower is better)
Translates to: RACLAKLESWEA*NQLIAPPQPAV
Trigger: CACTGCCGGCTGAGGAGGGGCGATGAGTTGGTTCAACGCCTCCCAGCTCTCCAGCTTCGCTAAGCAGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS GCA 72 bp CCCGCACAGCTGAGACGAAGGGGGCCCATGTGCGCATaGGCTTGCTTCTTCCACGTACACAGCAACCAAATC +
Preference number: 6 (lower is better)
Translates to: PAQLRRRGPMCA*ACFFHVHSNQI
Trigger: GATTTGGTTGCTGTGTACGTGGAAGAAGCAAGCGCATGCGCACATGGGCCCCCTTCGTCTCAGCTGTGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS GCA 72 bp TTCCCGGCTCTCCATACGGAATGGTCTCGGCCCAGATaGTCGGCTCCTCTTCCTGGATGTCCAGAACCCTGT +
Preference number: 6 (lower is better)
Translates to: FPALHTEWSRPR*SAPLPGCPEPC
Trigger: ACAGGGTTCTGGACATCCAGGAAGAGGAGCCGAGCATCTGGGCCGAGACCATTCCGTATGGAGAGCCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CCA 72 bp TGGATGTCCAGAACCCTGTCAATAGACTTCTGGGCCTaGGACAGGGCCTGCTTAGCGAAGCTGGAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: WMSRTLSIDFWA*DRACLAKLESW
Trigger: CCAGCTCTCCAGCTTCGCTAAGCAGGCCCTGTCCCAGGCCCAGAAGTCTATTGACAGGGTTCTGGACATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CCA 72 bp GGAATGGTCTCGGCCCAGATGCTCGGCTCCTCTTCCTaGATGTCCAGAACCCTGTCAATAGACTTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: GMVSAQMLGSSS*MSRTLSIDFWA
Trigger: GGCCCAGAAGTCTATTGACAGGGTTCTGGACATCCAGGAAGAGGAGCCGAGCATCTGGGCCGAGACCATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS GCA 72 bp CAGCTGAGACGAAGGGGGCCCATGTGCGCATGCGCTTaGTTCTTCCACGTACACAGCAACCAAATCTACGAG +
Preference number: 6 (lower is better)
Translates to: QLRRRGPMCACA*FFHVHSNQIYE
Trigger: CTCGTAGATTTGGTTGCTGTGTACGTGGAAGAAGCAAGCGCATGCGCACATGGGCCCCCTTCGTCTCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646304.1
CDS CCA 72 bp TCTTCCTGGATGTCCAGAACCCTGTCAATAGACTTCTaGGCCTGGGACAGGGCCTGCTTAGCGAAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SSWMSRTLSIDF*AWDRACLAKLE
Trigger: CTCCAGCTTCGCTAAGCAGGCCCTGTCCCAGGCCCAGAAGTCTATTGACAGGGTTCTGGACATCCAGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CAA 72 bp ACAGCTGAGACGAAGGGGGCCCATGTGCGCATGCGCTaGCTTCTTCCACGTACACAGCAACCAAATCTACGA +
Preference number: 6 (lower is better)
Translates to: TAETKGAHVRMR*LLPRTQQPNLR
Trigger: TCGTAGATTTGGTTGCTGTGTACGTGGAAGAAGCAAGCGCATGCGCACATGGGCCCCCTTCGTCTCAGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646304.1
CDS GCA 72 bp CTCCTTTCTGGCAGCCGCTTGTTCTGTACGCTGCAATaGAAGCCTAAGGTCCCCCACCTGTTTCAAATGCTG +
Preference number: 6 (lower is better)
Translates to: LLSGSRLFCTLQ*KPKVPHLFQML
Trigger: CAGCATTTGAAACAGGTGGGGGACCTTAGGCTTGCATTGCAGCGTACAGAACAAGCGGCTGCCAGAAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646304.1
CDS GCA 72 bp AAGGAGTTCTTCTGTAGCTGCACGTTCTCTCTCAACTaGTGCTGCCAGCAAGGTCTGGGATTCACCAAGCCT +
Preference number: 6 (lower is better)
Translates to: KEFFCSCTFSLN*CCQQGLGFTKP
Trigger: AGGCTTGGTGAATCCCAGACCTTGCTGGCAGCAGCAGTTGAGAGAGAACGTGCAGCTACAGAAGAACTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS TCA 72 bp ATTTCAACCCCCAGGTTGAAGTATCCCATCCTCCACTaGCAGGGGAACTTATTCCCGGCTCTCCATACGGAA +
Preference number: 6 (lower is better)
Translates to: ISTPRLKYPILH*QGNLFPALHTE
Trigger: TTCCGTATGGAGAGCCGGGAATAAGTTCCCCTGTCAGTGGAGGATGGGATACTTCAACCTGGGGGTTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CCA 72 bp GTTCACCGATCTCATGGCGTAAATAATCCTCCTTTCTaGCAGCCGCTTGTTCTGTACGCTGCAATGCAAGCC +
Preference number: 6 (lower is better)
Translates to: VHRSHGVNNPPF*QPLVLYAAMQA
Trigger: GGCTTGCATTGCAGCGTACAGAACAAGCGGCTGCCAGAAAGGAGGATTATTTACGCCATGAGATCGGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS TCA 72 bp AAACATGGGAGGCCTGCTCCAGCCCAGCATTTCCTGTaGCAGATCAGCCGAATATGCCTAATTCTGGCAATT +
Preference number: 6 (lower is better)
Translates to: KHGRPAPAQHFL*QISRICLILAI
Trigger: AATTGCCAGAATTAGGCATATTCGGCTGATCTGTCACAGGAAATGCTGGGCTGGAGCAGGCCTCCCATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645406.1
CDS CCA 72 bp TGTCTTGCAAACATCTTCCTTCTCAGAAAGTGCTTCTaGCTGACTTTCAGCAGGTTCACACTGCTCAGCCAC +
Preference number: 6 (lower is better)
Translates to: CLANIFLLRKCF*LTFSRFTLLSH
Trigger: GTGGCTGAGCAGTGTGAACCTGCTGAAAGTCAGCCAGAAGCACTTTCTGAGAAGGAAGATGTTTGCAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
CDS CCA 72 bp TACCTTGCAAACATCTTCCTTCTCAGAAAGTGCTTCTaGCTGACTTTCAGCAGGTTCACACTGCTCAGCCAC +
Preference number: 6 (lower is better)
Translates to: YLANIFLLRKCF*LTFSRFTLLSH
Trigger: GTGGCTGAGCAGTGTGAACCTGCTGAAAGTCAGCCAGAAGCACTTTCTGAGAAGGAAGATGTTTGCAAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646708.1
CDS TCA 72 bp GAATGGTCTGGACATCAGTTGGCGAGAGAAAGGCACTaGAGAAATTTTCAGATTCATCGACCACAGTCCTCC +
Preference number: 6 (lower is better)
Translates to: EWSGHQLARERH*RNFQIHRPQSS
Trigger: GGAGGACTGTGGTCGATGAATCTGAAAATTTCTTCAGTGCCTTTCTCTCGCCAACTGATGTCCAGACCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS TCA 72 bp GATTTTGCTGGAGGTTTTGATACCACTGGACTCTTCTaGATGGTCTGGACATCAGTTGGCGAGAGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: DFAGGFDTTGLF*MVWTSVGERKA
Trigger: TGCCTTTCTCTCGCCAACTGATGTCCAGACCATTCAGAAGAGTCCAGTGGTATCAAAACCTCCAGCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS TCA 72 bp CTTCGGTTCTTTTCTTCAAGTTCATCCATGTCTACCTaGAGACGGCCAAGATCTTTCTCTTGGCGTTCTACC +
Preference number: 6 (lower is better)
Translates to: LRFFSSSSSMST*RRPRSFSWRST
Trigger: GGTAGAACGCCAAGAGAAAGATCTTGGCCGTCTTCAGGTAGACATGGATGAACTTGAAGAAAAGAACCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646708.1
CDS GCA 72 bp TTCAACTGTCTTGCAAACATCTTCCTTCTCAGAAAGTaGTTCTGGCTGACTTTCAGCAGGTTCACACTGCTC +
Preference number: 6 (lower is better)
Translates to: FNCLANIFLLRK*FWLTFSRFTLL
Trigger: GAGCAGTGTGAACCTGCTGAAAGTCAGCCAGAAGCACTTTCTGAGAAGGAAGATGTTTGCAAGACAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
CDS CAA 72 bp CTAATTTCTCCCACGACGATGTCTGGGATCCCAGGGTaGCTTGCAAATTTTCTATTTGTCGAAGCAATGGTC +
Preference number: 6 (lower is better)
Translates to: LISPTTMSGIPG*LANFLFVEAMV
Trigger: GACCATTGCTTCGACAAATAGAAAATTTGCAAGCAACCCTGGGATCCCAGACATCGTCGTGGGAGAAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS CAA 72 bp GCTTTTCCTTTGAGCAGCATGTCAGCACTCAAAGTTTaGGATTTGGGGGCATTTCAGATTTCAGAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: AFPLSSMSALKV*DLGAFQISELG
Trigger: TCCCAGCTCTGAAATCTGAAATGCCCCCAAATCCAAAACTTTGAGTGCTGACATGCTGCTCAAAGGAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645406.1
CDS TCA 72 bp TCCTGTGCCTCACTATCCTTTGCAGCATTGGCTTTGTaGAGATCAGTAAGTTCTTTGTATGCACTATCCAGG +
Preference number: 6 (lower is better)
Translates to: SCASLSFAALAL*RSVSSLYALSR
Trigger: CCTGGATAGTGCATACAAAGAACTTACTGATCTTCACAAAGCCAATGCTGCAAAGGATAGTGAGGCACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646708.1
CDS TCA 72 bp TGTCGAAGCAATGGTCTTGTTGTTGATGAAACACTTTaGCTCAGTTCCTGGTTTCGATTCTCTGCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: CRSNGLVVDETL*LSSWFRFSASW
Trigger: CCAGGAAGCAGAGAATCGAAACCAGGAACTGAGTCAAAGTGTTTCATCAACAACAAGACCATTGCTTCGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS CCA 72 bp TACCACTGGACTCTTCTGAATGGTCTGGACATCAGTTaGCGAGAGAAAGGCACTGAAGAAATTTTCAGATTC +
Preference number: 6 (lower is better)
Translates to: YHWTLLNGLDIS*REKGTEEIFRF
Trigger: GAATCTGAAAATTTCTTCAGTGCCTTTCTCTCGCCAACTGATGTCCAGACCATTCAGAAGAGTCCAGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CAA 90 bp GTTGGCACCTTCATATCCGATTCTTTATTAACAGTTTCTTCGTGCTaGCCTTCAGTTTTAGGTGATGAAGTACCTGCTGCCAGAGTTTCC +
Preference number: 6 (lower is better)
Translates to: VGTFISDSLLTVSSC*PSVLGDEVPAARVS
Trigger: GGAAACTCTGGCAGCAGGTACTTCATCACCTAAAACTGAAGGCAAGCACGAAGAAACTGTTAATAAAGAATCGGATATGAAGGTGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS GCA 72 bp TTCTTGACTGGCCAATGTGCAAGGATTCATGTAAGCTaGTTTTCACTTCTTCTTCTGGTCGTTGTGATTTTG +
Preference number: 6 (lower is better)
Translates to: FLTGQCARIHVS*FSLLLLVVVIL
Trigger: CAAAATCACAACGACCAGAAGAAGAAGTGAAAAGCAGCTTACATGAATCCTTGCACATTGGCCAGTCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CCA 72 bp GAAAGATTCTTCTCTAATTTCTCCCACGACGATGTCTaGGATCCCAGGGTTGCTTGCAAATTTTCTATTTGT +
Preference number: 6 (lower is better)
Translates to: ERFFSNFSHDDV*DPRVACKFSIC
Trigger: ACAAATAGAAAATTTGCAAGCAACCCTGGGATCCCAGACATCGTCGTGGGAGAAATTAGAGAAGAATCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS CAA 72 bp AGTCTTTTACTTGTGATTCAGTTGTTTCAGGAGTTCTaGACTGGCCAATGTGCAAGGATTCATGTAAGCTGC +
Preference number: 6 (lower is better)
Translates to: SLLLVIQLFQEF*TGQCARIHVSC
Trigger: GCAGCTTACATGAATCCTTGCACATTGGCCAGTCAAGAACTCCTGAAACAACTGAATCACAAGTAAAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CAA 90 bp ATCCCAGGGTTGCTTGCAAATTTTCTATTTGTCGAAGCAATGGTCTaGTTGTTGATGAAACACTTTGACTCAGTTCCTGGTTTCGATTCT +
Preference number: 6 (lower is better)
Translates to: IPGLLANFLFVEAMV*LLMKHFDSVPGFDS
Trigger: AGAATCGAAACCAGGAACTGAGTCAAAGTGTTTCATCAACAACAAGACCATTGCTTCGACAAATAGAAAATTTGCAAGCAACCCTGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398559.7
ENST00000646304.1
ENST00000646708.1
CDS CCA 72 bp TTTACTTGTGATTCAGTTGTTTCAGGAGTTCTTGACTaGCCAATGTGCAAGGATTCATGTAAGCTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: FTCDSVVSGVLD*PMCKDSCKLLF
Trigger: GAAAAGCAGCTTACATGAATCCTTGCACATTGGCCAGTCAAGAACTCCTGAAACAACTGAATCACAAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CAA 72 bp AAACACACAAAGAAGAGTCTTTTACTTGTGATTCAGTaGTTTCAGGAGTTCTTGACTGGCCAATGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: KHTKKSLLLVIQ*FQEFLTGQCAR
Trigger: CCTTGCACATTGGCCAGTCAAGAACTCCTGAAACAACTGAATCACAAGTAAAAGACTCTTCTTTGTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CAA 90 bp ACAAAGAAGAGTCTTTTACTTGTGATTCAGTTGTTTCAGGAGTTCTaGACTGGCCAATGTGCAAGGATTCATGTAAGCTGCTTTTCACTT +
Preference number: 6 (lower is better)
Translates to: TKKSLLLVIQLFQEF*TGQCARIHVSCFSL
Trigger: AAGTGAAAAGCAGCTTACATGAATCCTTGCACATTGGCCAGTCAAGAACTCCTGAAACAACTGAATCACAAGTAAAAGACTCTTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS GCA 72 bp ACCTTCATATCCGATTCTTTATTAACAGTTTCTTCGTaGTTGCCTTCAGTTTTAGGTGATGAAGTACCTGCT +
Preference number: 6 (lower is better)
Translates to: TFISDSLLTVSS*LPSVLGDEVPA
Trigger: AGCAGGTACTTCATCACCTAAAACTGAAGGCAAGCACGAAGAAACTGTTAATAAAGAATCGGATATGAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1
CDS CCA 72 bp AAAGCATCAGATGAACAGCAACTCTCAGTGAGTTTTTaGAAATCATCTAAACGATTATATTCAGGACAAGCA +
Preference number: 6 (lower is better)
Translates to: KASDEQQLSVSF*KSSKRLYSGQA
Trigger: TGCTTGTCCTGAATATAATCGTTTAGATGATTTCCAAAAACTCACTGAGAGTTGCTGTTCATCTGATGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398559.7
ENST00000488010.5
ENST00000646304.1
ENST00000646708.1