RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM95 (Homo sapiens)

Ensembl gene IDs: ENSG00000182896

Ensembl transcript IDs: ENST00000330767.4, ENST00000389982.8, ENST00000576060.6, ENST00000672158.1, ENST00000673329.3, ENST00000673610.1

Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTaGTCTCACTCTAGTGGGGTGAGTTTTCCAGAACATGCATTCCCG +
Preference number: 1 (lower is better)
Translates to: LLTRWREGMPANPLM*SHSSGVSFPEHAFP
Trigger: CGGGAATGCATGTTCTGGAAAACTCACCCCACTAGAGTGAGATCACATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR TCA 90 bp TTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCATGTaGTTGGTTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTG +
Preference number: 1 (lower is better)
Translates to: FFPSVDIFLALLTAM*LVEGWRGGTFQLWV
Trigger: CACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAACCAATCACATGGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR TCA 90 bp GGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGCCACTGGGACTAAGGGGCTaGCTGGTTCCCCTCCAAGGG +
Preference number: 2 (lower is better)
Translates to: GLEGRNFPAVGAWVPGRPLGLRG*LVPLQG
Trigger: CCCTTGGAGGGGAACCAGTCAGCCCCTTAGTCCCAG...TGGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
3UTR-3UTR TCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCTCCCGGGAGGCCATCTaGCACTGGGATTGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCSREAI*HWDCGG
Trigger: TCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGA...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp GGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCAGCTGTGGGTGCCTaGGTTCCCGGGAGGCCATCT +
Preference number: 2 (lower is better)
Translates to: GRPGFQTVNTMEGGHAREPAVGA*VPGRPS
Trigger: AGATGGCCTCCCGGGAACCCAGGCACCCACAGCTGG...TTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR GCA 90 bp GGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGCCATGTGGAAGTTGTGAGTaGATACCCCTTAGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: GLEGRNFPAVGAWVPGRPCGSCE*IPLRAG
Trigger: TCCAGCTCTAAGGGGTATGCACTCACAACTTCCACA...TGGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
3UTR-3UTR GCA 90 bp ATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGACTTTCCAGCTGTGGGTaGCTGGGTTCCCGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: IPGFPISHRRAWNSFWGRLSSCG*LGSREA
Trigger: GGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAG...TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp CCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTCCAGCTGTGGGTGCCTaGGTTCCCGGGAGGCCATCT +
Preference number: 2 (lower is better)
Translates to: PGFQTVNTMEGGHAREPTPAVGA*VPGRPS
Trigger: AGATGGCCTCCCGGGAACCCAGGCACCCACAGCTGG...AGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp ACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGATCTCACCAGCTGTGGGTGCCTaGGTTCCCGGGAGGCCATCT +
Preference number: 2 (lower is better)
Translates to: TVNTMEGGHAREPTDVISPAVGA*VPGRPS
Trigger: AGATGGCCTCCCGGGAACCCAGGCACCCACAGCTGG...TGAGATCACATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp CATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGCCAGCTGTGGGTGCCTaGGTTCCCGGGAGGCCATCT +
Preference number: 2 (lower is better)
Translates to: HAFPDSPSVIGGPGIASGPAVGA*VPGRPS
Trigger: AGATGGCCTCCCGGGAACCCAGGCACCCACAGCTGG...CCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCGGAACTTTCCAGCTGTaGGTGCCTGGGTTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCGTFQL*VPGFPG
Trigger: TCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCC...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR TCA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCTGGGACTAAGGGGCTaGCTGGTTCCCCTCCAAGGG +
Preference number: 2 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMLGLRG*LVPLQG
Trigger: CCCTTGGAGGGGAACCAGTCAGCCCCTTAGTCCCAG...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
3UTR-3UTR TCA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGTCCCGGGAGGCCATCTaGCACTGGGATTGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMSREAI*HWDCGG
Trigger: TCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGA...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR GCA 90 bp GGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATCTTTCCAGCTGTGGGTaGCTGGGTTCCCGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: GFQTVNTMEGGHAREPTDLSSCG*LGSREA
Trigger: GGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAG...ATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR GCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCAGCTTCTGGGGCAGATaGCCCCGCTTTCCCGGAACA +
Preference number: 2 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPSFWGR*PRFPGT
Trigger: TGTTCCGGGAAAGCGGGGGCATCTGCCCCAGAAGCT...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp CCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGGAACTTTCCAGCTGTaGGTGCCTGGGTTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: PGFQTVNTMEGGHAREPTGTFQL*VPGFPG
Trigger: TCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCC...AGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCTGGGTGTGGTGGGAGTaGCGTAGGGGATTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCWVWWE*RRGFFP
Trigger: AGGAAAGAATCCCCTACGCCACTCCCACCACACCCA...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR TCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTTCCCGGGAGGCCATCTaGCACTGGGATTGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPSREAI*HWDCGG
Trigger: TCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGA...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp GGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAATGGGTGTGGTGGGAGTaGCGTAGGGGATTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: GRPGFQTVNTMEGGHAREWVWWE*RRGFFP
Trigger: AGGAAAGAATCCCCTACGCCACTCCCACCACACCCA...TTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAACTTTCCAGCTGTaGGTGCCTGGGTTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPGTFQL*VPGFPG
Trigger: TCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCC...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp CCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTTGGGTGTGGTGGGAGTaGCGTAGGGGATTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: PGFQTVNTMEGGHAREPTWVWWE*RRGFFP
Trigger: AGGAAAGAATCCCCTACGCCACTCCCACCACACCCA...AGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp GATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGGCCTGGAATAGCTTCTaGGGCAGATGCCCCCGCTTT +
Preference number: 2 (lower is better)
Translates to: DFKLLTRWREGMPANPLMAWNSF*GRCPRF
Trigger: AAAGCGGGGGCATCTGCCCCAGAAGCTATTCCAGGC...CATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp GGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAAAGTCATAGGAGGGCCTaGAATAGCTTCTGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: GRPGFQTVNTMEGGHARESHRRA*NSFWGR
Trigger: TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACT...TTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR TCA 90 bp CATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGTTGTTGACAGCCATGTaGTTGGTTGAGGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: HAFPDSPSVIGGPGIASGLLTAM*LVEGWR
Trigger: CCTCCAGCCCTCAACCAATCACATGGCTGTCAACAA...CCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR TCA 90 bp ATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATTGTTGACAGCCATGTaGTTGGTTGAGGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: IPGFPISHRRAWNSFWGRLLTAM*LVEGWR
Trigger: CCTCCAGCCCTCAACCAATCACATGGCTGTCAACAA...TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR TCA 90 bp ATGGAGGCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGTGCCCGCGAACCCACTaGTGTGATCTCACTCTAGTG +
Preference number: 2 (lower is better)
Translates to: MEASEGGQDFKLLTRWRECPRTH*CDLTLV
Trigger: CACTAGAGTGAGATCACATCAGTGGGTTCGCGGGCA...CTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGCCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp TGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGAAGCAGGGATGTCTaGGTTTTAGGGTCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: CIPGFPISHRRAWNSFWGRSRDV*VLGSGD
Trigger: GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCT...GCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCCTGACACTGGGATTGTaGGGGATCTGGGTTTTTGGG +
Preference number: 2 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPLTLGL*GIWVFG
Trigger: CCCAAAAACCCAGATCCCCCACAATCCCAGTGTCAG...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp ACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGATCTCAAGTCATAGGAGGGCCTaGAATAGCTTCTGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: TVNTMEGGHAREPTDVISSHRRA*NSFWGR
Trigger: TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACT...TGAGATCACATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp ACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGATCTCAAGAAGCAGGGATGTCTaGGTTTTAGGGTCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: TVNTMEGGHAREPTDVISRSRDV*VLGSGD
Trigger: GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCT...TGAGATCACATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR TCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTTTGTTGACAGCCATGTaGTTGGTTGAGGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPLLTAM*LVEGWR
Trigger: CCTCCAGCCCTCAACCAATCACATGGCTGTCAACAA...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR GCA 90 bp ATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGTGGAAGTTGTGAGTaGATACCCCTTAGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: IPGFPISHRRAWNSFWGRCGSCE*IPLRAG
Trigger: TCCAGCTCTAAGGGGTATGCACTCACAACTTCCACA...TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
3UTR-3UTR TCA 90 bp CATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGTTTTCCTGGCATTGTTaGCAGCCATGTGATTGGTTG +
Preference number: 2 (lower is better)
Translates to: HAFPDSPSVIGGPGIASGFSWHC*QPCDWL
Trigger: CAACCAATCACATGGCTGTCAACAATGCCAGGAAAA...CCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR GCA 90 bp ATGGAGGCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGAGTTTTCCAGAACATaGATTCCCGGATTCCCCATC +
Preference number: 2 (lower is better)
Translates to: MEASEGGQDFKLLTRWREEFSRT*IPGFPI
Trigger: GATGGGGAATCCGGGAATGCATGTTCTGGAAAACTC...CTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR GCA 90 bp GGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGAGTTTTCCAGAACATaGATTCCCGGATTCCCCATC +
Preference number: 2 (lower is better)
Translates to: GFQTVNTMEGGHAREPTDEFSRT*IPGFPI
Trigger: GATGGGGAATCCGGGAATGCATGTTCTGGAAAACTC...ATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTAGAAGCAGGGATGTCTaGGTTTTAGGGTCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPRSRDV*VLGSGD
Trigger: GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCT...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR TCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTTTTTCCTGGCATTGTTaGCAGCCATGTGATTGGTTG +
Preference number: 2 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPFSWHC*QPCDWL
Trigger: CAACCAATCACATGGCTGTCAACAATGCCAGGAAAA...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR TCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTTTTCCTGGCATTGTTaGCAGCCATGTGATTGGTTG +
Preference number: 2 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFFSWHC*QPCDWL
Trigger: CAACCAATCACATGGCTGTCAACAATGCCAGGAAAA...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCAGAAGCAGGGATGTCTaGGTTTTAGGGTCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: WRRGFFPSVDIFLALLTARSRDV*VLGSGD
Trigger: GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCT...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR GCA 90 bp GGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCATGTGATTTGTGGAAGTTGTGAGTaGATACCCCTTAGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: GILSFCRYFPGIVDSHVICGSCE*IPLRAG
Trigger: TCCAGCTCTAAGGGGTATGCACTCACAACTTCCACA...AATCACATGGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
3UTR CCA 72 bp GGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTaGGTTCCCGGGAGGCCATCTGACACTGGGATTGTG +
Preference number: 3 (lower is better)
Translates to: GLEGRNFPAVGA*VPGRPSDTGIV
Trigger: CACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR CCA 72 bp TTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTaGGGCAGATGCCCCCGCTTTCCCGGAACAGGCAGA +
Preference number: 3 (lower is better)
Translates to: FPISHRRAWNSF*GRCPRFPGTGR
Trigger: TCTGCCTGTTCCGGGAAAGCGGGGGCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CAA 90 bp CATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGCATCTGACACTGGGATaGTGGGGGATCTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: HAFPDSPSVIGGPGIASGHLTLG*WGIWVF
Trigger: AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATG...CCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CAA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCATCTGACACTGGGATaGTGGGGGATCTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMHLTLG*WGIWVF
Trigger: AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATG...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CAA 90 bp ACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGATCTCACATCTGACACTGGGATaGTGGGGGATCTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: TVNTMEGGHAREPTDVISHLTLG*WGIWVF
Trigger: AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATG...TGAGATCACATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
3UTR-3UTR CAA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTCATCTGACACTGGGATaGTGGGGGATCTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPHLTLG*WGIWVF
Trigger: AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATG...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp GGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGCCACGGCGCTGCCCCAGCTaGGCCGAGGAATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GLEGRNFPAVGAWVPGRPRRCPS*AEECSA
Trigger: TGCAGAGCATTCCTCGGCTCAGCTGGGGCAGCGCCG...TGGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389982.8
ENST00000672158.1
CDS-3UTR TCA 90 bp GGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGCCAGTGCCAGCCTCCACATaGGGACCACTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GLEGRNFPAVGAWVPGRPVPAST*GPLGDG
Trigger: CCCATCCCCCAGTGGTCCTCATGTGGAGGCTGGCAC...TGGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGCCACCGTCCCCTTGCAGGTaGAGCAGTTGTACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GLEGRNFPAVGAWVPGRPPSPCR*SSCTAW
Trigger: CCACGCTGTACAACTGCTCCACCTGCAAGGGGACGG...TGGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGCCAGCTGTGGGTGCCTaGGTTCCCGGGAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: LRAGGEELSSCGCLGSREPAVGA*VPGRPS
Trigger: AGATGGCCTCCCGGGAACCCAGGCACCCACAGCTGG...CTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGCCACAGAAGACACAAGCCTaGGCGGCTGCCAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: GLEGRNFPAVGAWVPGRPQKTQA*AAARKT
Trigger: GGTTTTCCTGGCAGCCGCCCAGGCTTGTGTCTTCTG...TGGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCAGGACCACTGGGGGATaGGGCGGCGCTGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCRTTGG*GGAAPA
Trigger: AGCTGGGGCAGCGCCGCCCCATCCCCCAGTGGTCCT...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
CDS-3UTR TCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTGTGCCAGCCTCCACATaGGGACCACTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFVPAST*GPLGDG
Trigger: CCCATCCCCCAGTGGTCCTCATGTGGAGGCTGGCAC...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGCCAACACCTCCGTCCCCTTaGAGGTGGAGCAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: GLEGRNFPAVGAWVPGRPTPPSP*RWSSCT
Trigger: TGTACAACTGCTCCACCTGCAAGGGGACGGAGGTGT...TGGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGCCACTTTTTGCTTGGAGGTaGTGGGACTCCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLEGRNFPAVGAWVPGRPLFAWR*WDSTRR
Trigger: CCTCCTGGTGGAGTCCCACCACCTCCAAGCAAAAAG...TGGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGGAACTTTCCAGCTGTaGGTGCCTGGGTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LRAGGEELSSCGCLGSREGTFQL*VPGFPG
Trigger: TCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCC...CTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAAAGGACCACTGGGGGATaGGGCGGCGCTGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GRPGFQTVNTMEGGHARERTTGG*GGAAPA
Trigger: AGCTGGGGCAGCGCCGCCCCATCCCCCAGTGGTCCT...TTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
CDS-3UTR TCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTTCCCGGGAGGCCATCTaGCACTGGGATTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFSREAI*HWDCGG
Trigger: TCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGA...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCTGGCCTCCATCTGGCTaGAGAGCCGAGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: CIPGFPISHRRAWNSFWGWPPSG*RAEPGG
Trigger: GCCGCCTGGCTCGGCTCTGCAGCCAGATGGAGGCCA...GCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGTTGTACAGCGTGGTaGTGCCCCGGCAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: CIPGFPISHRRAWNSFWGSCTAW*CPGRRG
Trigger: CCCCCGCCTGCCGGGGCAGCACCACGCTGTACAACT...GCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
CDS-3UTR CCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCCCAGCTGTGGGTGCCTaGGTTCCCGGGAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCPAVGA*VPGRPS
Trigger: AGATGGCCTCCCGGGAACCCAGGCACCCACAGCTGG...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTGGGGTGTGGGTGTGGTaGGAGTGGCGTAGGGGATTC +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFGVWVW*EWRRGF
Trigger: GAATCCCCTACGCCACTCCCACCACACCCACACCCC...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGCCAAGTCATAGGAGGGCCTaGAATAGCTTCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLEGRNFPAVGAWVPGRPSHRRA*NSFWGR
Trigger: TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACT...TGGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp CATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGCGGCGCTGCCCCAGCTaGGCCGAGGAATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HAFPDSPSVIGGPGIASGRRCPS*AEECSA
Trigger: TGCAGAGCATTCCTCGGCTCAGCTGGGGCAGCGCCG...CCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389982.8
ENST00000672158.1
CDS-3UTR GCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTTGTACAGCGTGGTGCTaGCCCCTGCAGGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFCTAWC*PLQETA
Trigger: TGCTGTCTCCTGCAGGGGGCAGCACCACGCTGTACA...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330767.4
ENST00000673610.1
CDS-3UTR GCA 90 bp ATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGAAGTTGTACAGCGTGGTaGTGCCCCGGCAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: IPGFPISHRRAWNSFWGRSCTAW*CPGRRG
Trigger: CCCCCGCCTGCCGGGGCAGCACCACGCTGTACAACT...TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
CDS-3UTR CCA 90 bp TGTGATTGGTTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTCGGCCTGACAAGTCGTaGGCTGGGAGGCGACAGAAG +
Preference number: 4 (lower is better)
Translates to: CDWLRAGGEELSSCGCLGRPDKS*AGRRQK
Trigger: CTTCTGTCGCCTCCCAGCCCACGACTTGTCAGGCCG...ACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAACCAATCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGCACATTCCTTCTGCCTaGCCTCCATCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LRAGGEELSSCGCLGSREHIPSA*PPSGCR
Trigger: TCTGCAGCCAGATGGAGGCCAGGCAGAAGGAATGTG...CTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGAAAGGCCGAGAAGTCTaGGGAGGCCCCACATTCCTT +
Preference number: 4 (lower is better)
Translates to: LRAGGEELSSCGCLGSREKGREV*GGPTFL
Trigger: AAGGAATGTGGGGCCTCCCCAGACTTCTCGGCCTTT...CTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTAGTTGTACAGCGTGGTaGTGCCCCCTGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFSCTAW*CPLQET
Trigger: TGTCTCCTGCAGGGGGCAGCACCACGCTGTACAACT...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330767.4
ENST00000673610.1
CDS-3UTR GCA 90 bp GGTTCCCCTCCAAGGGATGTGGAAGTTGTGAGTGCATACCCCTTAGAGCTGGAGCTTTCCAGCTGTGGGTaGCTGGGTTCCCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GSPPRDVEVVSAYPLELELSSCG*LGSREA
Trigger: GGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAG...CTCCAGCTCTAAGGGGTATGCACTCACAACTTCCACATCCCTTGGAGGGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR GCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCAGCTTCTGGGGCAGATaGCCCCGCTTTCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCSFWGR*PRFPGT
Trigger: TGTTCCGGGAAAGCGGGGGCATCTGCCCCAGAAGCT...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCAGCAGTTGTACAGCGTaGTGCTGCCCCCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCSSCTA*CCPLQE
Trigger: CTCCTGCAGGGGGCAGCACCACGCTGTACAACTGCT...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330767.4
ENST00000673610.1
CDS-3UTR CCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCCCAGCTGTGGGTGCCTaGGTTCCCGGGAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPPAVGA*VPGRPS
Trigger: AGATGGCCTCCCGGGAACCCAGGCACCCACAGCTGG...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGAGTCATAGGAGGGCCTaGAATAGCTTCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LRAGGEELSSCGCLGSRESHRRA*NSFWGR
Trigger: TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACT...CTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATCCACATGAGGACCACTaGGGGATGGGGCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GFQTVNTMEGGHAREPTDPHEDH*GMGRRC
Trigger: GCAGCGCCGCCCCATCCCCCAGTGGTCCTCATGTGG...ATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
CDS-3UTR CCA 90 bp ATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGAAGCAGTTGTACAGCGTaGTGCTGCCCCGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: IPGFPISHRRAWNSFWGRSSCTA*CCPGRR
Trigger: CCGCCTGCCGGGGCAGCACCACGCTGTACAACTGCT...TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
CDS-3UTR CCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTGCTTCCCAAAGATCCTaGGAAGCAGCGCTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFASQRS*EAALSG
Trigger: CCCCGAAAGCGCTGCTTCCCAGGATCTTTGGGAAGC...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389982.8
ENST00000672158.1
CDS-3UTR TCA 90 bp GGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGCCATGTGAGTCTTCTCTGTaGCTTTGTTCATGGACACCT +
Preference number: 4 (lower is better)
Translates to: GLEGRNFPAVGAWVPGRPCESSL*LCSWTP
Trigger: AGGTGTCCATGAACAAAGTCACAGAGAAGACTCACA...TGGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TGTGATTGGTTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTGCTTCCCAAAGATCCTaGCTTCCTGGGAAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: CDWLRAGGEELSSCGCLGASQRS*LPGKQR
Trigger: GCGCTGCTTCCCAGGAAGTCAGGATCTTTGGGAAGC...ACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAACCAATCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR TCA 90 bp ACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGATCTCACTGGGACTAAGGGGCTaGCTGGTTCCCCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: TVNTMEGGHAREPTDVISLGLRG*LVPLQG
Trigger: CCCTTGGAGGGGAACCAGTCAGCCCCTTAGTCCCAG...TGAGATCACATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCTGTACAGCGTGGTGCTaGCCCCTGCAGGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: CIPGFPISHRRAWNSFWGCTAWC*PLQETA
Trigger: TGCTGTCTCCTGCAGGGGGCAGCACCACGCTGTACA...GCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330767.4
ENST00000673610.1
CDS-3UTR GCA 90 bp GATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGCTTTCCAGCTGTGGGTaGCTGGGTTCCCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DFKLLTRWREGMPANPLMLSSCG*LGSREA
Trigger: GGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAG...CATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCCAGAAGACACAAGCCTaGGCGGCTGCCAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCQKTQA*AAARKT
Trigger: GGTTTTCCTGGCAGCCGCCCAGGCTTGTGTCTTCTG...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCGGCCTGACAAGTCGTaGGCTGGGAGGCGACAGAAG +
Preference number: 4 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMRPDKS*AGRRQK
Trigger: CTTCTGTCGCCTCCCAGCCCACGACTTGTCAGGCCG...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTCGGCCTGACAAGTCGTaGGCTGGGAGGCGACAGAAG +
Preference number: 4 (lower is better)
Translates to: PGFQTVNTMEGGHAREPTRPDKS*AGRRQK
Trigger: CTTCTGTCGCCTCCCAGCCCACGACTTGTCAGGCCG...AGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCCGGCCTGACAAGTCGTaGGCTGGGAGGCGACAGAAG +
Preference number: 4 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPRPDKS*AGRRQK
Trigger: CTTCTGTCGCCTCCCAGCCCACGACTTGTCAGGCCG...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp ACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGATCTCACGGCCTGACAAGTCGTaGGCTGGGAGGCGACAGAAG +
Preference number: 4 (lower is better)
Translates to: TVNTMEGGHAREPTDVISRPDKS*AGRRQK
Trigger: CTTCTGTCGCCTCCCAGCCCACGACTTGTCAGGCCG...TGAGATCACATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTCACATTCCTTCTGCCTaGCCTCCATCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFHIPSA*PPSGCR
Trigger: TCTGCAGCCAGATGGAGGCCAGGCAGAAGGAATGTG...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATCCAGCTGTGGGTGCCTaGGTTCCCGGGAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GFQTVNTMEGGHAREPTDPAVGA*VPGRPS
Trigger: AGATGGCCTCCCGGGAACCCAGGCACCCACAGCTGG...ATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCGCCTGGAATAGCTTCTaGGGCAGATGCCCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCAWNSF*GRCPRF
Trigger: AAAGCGGGGGCATCTGCCCCAGAAGCTATTCCAGGC...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp ATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATTAGGCCTGGCAGGATaGAGGCCTCTGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: IPGFPISHRRAWNSFWGRLGLAG*RPLREA
Trigger: GGCCTCCCTCAGAGGCCTCCATCCTGCCAGGCCTAA...TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCTTAGGCCTGGCAGGATaGAGGCCTCTGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPLGLAG*RPLREA
Trigger: GGCCTCCCTCAGAGGCCTCCATCCTGCCAGGCCTAA...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGGACCACTGGGGGATaGGGCGGCGCTGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNRTTGG*GGAAPA
Trigger: AGCTGGGGCAGCGCCGCCCCATCCCCCAGTGGTCCT...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
CDS-3UTR TCA 90 bp GGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAAGCTTCCCAAAGATCCTaGCTTCCTGGGAAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GRPGFQTVNTMEGGHAREASQRS*LPGKQR
Trigger: GCGCTGCTTCCCAGGAAGTCAGGATCTTTGGGAAGC...TTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR TCA 90 bp CTGACTGGTTCCCCTCCAAGGGATGTGGAAGTTGTGAGTGCATACCCCTTAGAGCTGGGACTAAGGGGCTaGCTGGTTCCCCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LTGSPPRDVEVVSAYPLELGLRG*LVPLQG
Trigger: CCCTTGGAGGGGAACCAGTCAGCCCCTTAGTCCCAG...CTCTAAGGGGTATGCACTCACAACTTCCACATCCCTTGGAGGGGAACCAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR TCA 90 bp GGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATTCCCGGGAGGCCATCTaGCACTGGGATTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GFQTVNTMEGGHAREPTDSREAI*HWDCGG
Trigger: TCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGA...ATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGCTCACTCTAGTGGGGTaGGTTTTCCAGAACATGCAT +
Preference number: 4 (lower is better)
Translates to: LRAGGEELSSCGCLGSRELTLVG*VFQNMH
Trigger: ATGCATGTTCTGGAAAACTCACCCCACTAGAGTGAG...CTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCGCGAACCCACTGATGTaGTCTCACTCTAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCANPLM*SHSSGV
Trigger: CACCCCACTAGAGTGAGATCACATCAGTGGGTTCGC...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TGTGATTGGTTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTGCCCGCGAACCCACTaGTGTGATCTCACTCTAGTG +
Preference number: 4 (lower is better)
Translates to: CDWLRAGGEELSSCGCLGCPRTH*CDLTLV
Trigger: CACTAGAGTGAGATCACATCAGTGGGTTCGCGGGCA...ACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAACCAATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATTGGCCTCCATCTGGCTaGAGAGCCGAGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNWPPSG*RAEPGG
Trigger: GCCGCCTGGCTCGGCTCTGCAGCCAGATGGAGGCCA...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp CTGACTGGTTCCCCTCCAAGGGATGTGGAAGTTGTGAGTGCATACCCCTTAGAGCGTGGTGCTGCCCCCTaGAGGAGACAGCAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LTGSPPRDVEVVSAYPLERGAAP*RRQQRQ
Trigger: TTGCCTCTGCTGTCTCCTGCAGGGGGCAGCACCACG...CTCTAAGGGGTATGCACTCACAACTTCCACATCCCTTGGAGGGGAACCAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330767.4
ENST00000673610.1
CDS-3UTR GCA 90 bp TTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGTGTGGAAGTTGTGAGTaGATACCCCTTAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LRAGGEELSSCGCLGSRECGSCE*IPLRAG
Trigger: TCCAGCTCTAAGGGGTATGCACTCACAACTTCCACA...CTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCCTTTCCAGCTGTGGGTaGCTGGGTTCCCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFLSSCG*LGSREA
Trigger: GGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAG...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTTAAAGGCCGAGAAGTCTaGGGAGGCCCCACATTCCTT +
Preference number: 4 (lower is better)
Translates to: PGFPGGHLTLGLWGIWVFKGREV*GGPTFL
Trigger: AAGGAATGTGGGGCCTCCCCAGACTTCTCGGCCTTT...AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTCTTAGAGCTGGAGGCTaGGAGGTTTTCAGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFLRAGG*EVFSVF
Trigger: GAAGACGCTGAAAACCTCCCAGCCTCCAGCTCTAAG...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTCTGACACTGGGATTGTaGGGGATCTGGGTTTTTGGG +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFLTLGL*GIWVFG
Trigger: CCCAAAAACCCAGATCCCCCACAATCCCAGTGTCAG...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGGAACTTTCCAGCTGTaGGTGCCTGGGTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: HAFPDSPSVIGGPGIASGGTFQL*VPGFPG
Trigger: TCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCC...CCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp ATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGAGGAACTTTCCAGCTGTaGGTGCCTGGGTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: IPGFPISHRRAWNSFWGRGTFQL*VPGFPG
Trigger: TCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCC...TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TGTGATTGGTTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTGGGTGTGGTGGGAGTaGCGTAGGGGATTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: CDWLRAGGEELSSCGCLGWVWWE*RRGFFP
Trigger: AGGAAAGAATCCCCTACGCCACTCCCACCACACCCA...ACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAACCAATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGGGGTGTGGGTGTGGTaGGAGTGGCGTAGGGGATTC +
Preference number: 4 (lower is better)
Translates to: GFQTVNTMEGGHAREPTDGVWVW*EWRRGF
Trigger: GAATCCCCTACGCCACTCCCACCACACCCACACCCC...ATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TGTGATTGGTTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTAAACTGTTAACACGATaGAGGGAGGGCATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: CDWLRAGGEELSSCGCLGKLLTR*REGMPA
Trigger: CGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTT...ACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAACCAATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATTTAGGCCTGGCAGGATaGAGGCCTCTGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GFQTVNTMEGGHAREPTDLGLAG*RPLREA
Trigger: GGCCTCCCTCAGAGGCCTCCATCCTGCCAGGCCTAA...ATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp ATGGAGGCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGTTAGGCCTGGCAGGATaGAGGCCTCTGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: MEASEGGQDFKLLTRWRELGLAG*RPLREA
Trigger: GGCCTCCCTCAGAGGCCTCCATCCTGCCAGGCCTAA...CTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGCCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATCCACATGAGGACCACTaGGGGATGGGGCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNPHEDH*GMGRRC
Trigger: GCAGCGCCGCCCCATCCCCCAGTGGTCCTCATGTGG...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
CDS-3UTR CCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCAGCAGTTGTACAGCGTaGTGCTGCCCCGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFSSCTA*CCPGRR
Trigger: CCGCCTGCCGGGGCAGCACCACGCTGTACAACTGCT...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
CDS-3UTR TCA 90 bp GTGTGGTGGGAGTGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCAGTGCCAGCCTCCACATaGGGACCACTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: VWWEWRRGFFPSVDIFLAVPAST*GPLGDG
Trigger: CCCATCCCCCAGTGGTCCTCATGTGGAGGCTGGCAC...TGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCACTCCCACCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCCCGAGCCAGGCGGCCTaGCAAGTCGTGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTAPSQAA*QVVGWE
Trigger: CTCCCAGCCCACGACTTGTCAGGCCGCCTGGCTCGG...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCCTGGGACTAAGGGGCTaGCTGGTTCCCCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFLGLRG*LVPLQG
Trigger: CCCTTGGAGGGGAACCAGTCAGCCCCTTAGTCCCAG...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCTTGTTGACAGCCATGTaGTTGGTTGAGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCLLTAM*LVEGWR
Trigger: CCTCCAGCCCTCAACCAATCACATGGCTGTCAACAA...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGAGTTGTACAGCGTGGTaGTGCCCCCTGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMSCTAW*CPLQET
Trigger: TGTCTCCTGCAGGGGGCAGCACCACGCTGTACAACT...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330767.4
ENST00000673610.1
CDS-3UTR CCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCCAGAAGACACAAGCCTaGGCGGCTGCCAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPQKTQA*AAARKT
Trigger: GGTTTTCCTGGCAGCCGCCCAGGCTTGTGTCTTCTG...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTTGTACTCAGGGAGCTTaGTCTTTCGAAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFCTQGA*SFEANS
Trigger: GGAGTTGGCTTCGAAAGACCAAGCTCCCTGAGTACA...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TGTGATTGGTTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTAAGCCACTTTTTGCTTaGAGGTGGTGGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: CDWLRAGGEELSSCGCLGKPLFA*RWWDST
Trigger: GGTGGAGTCCCACCACCTCCAAGCAAAAAGTGGCTT...ACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAACCAATCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCCTTAGAGCTGGAGGCTaGGAGGTTTTCAGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCLRAGG*EVFSVF
Trigger: GAAGACGCTGAAAACCTCCCAGCCTCCAGCTCTAAG...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTAGAAGCAGGGATGTCTaGGTTTTAGGGTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFRSRDV*VLGSGD
Trigger: GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCT...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGGGTGTGGGTGTGGTaGGAGTGGCGTAGGGGATTC +
Preference number: 4 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPGVWVW*EWRRGF
Trigger: GAATCCCCTACGCCACTCCCACCACACCCACACCCC...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp ACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGATCTCAGCCTGGAATAGCTTCTaGGGCAGATGCCCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: TVNTMEGGHAREPTDVISAWNSF*GRCPRF
Trigger: AAAGCGGGGGCATCTGCCCCAGAAGCTATTCCAGGC...TGAGATCACATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAGACGTGCCAGCCTCCACATaGGGACCACTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: FIISPTRSRDVWVLGSGDVPAST*GPLGDG
Trigger: CCCATCCCCCAGTGGTCCTCATGTGGAGGCTGGCAC...GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp GATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGGCTTCCCAAAGATCCTaGCTTCCTGGGAAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: DFKLLTRWREGMPANPLMASQRS*LPGKQR
Trigger: GCGCTGCTTCCCAGGAAGTCAGGATCTTTGGGAAGC...CATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR TCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATTCCCGGGAGGCCATCTaGCACTGGGATTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNSREAI*HWDCGG
Trigger: TCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGA...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCTTGTTGACAGCCATGTaGTTGGTTGAGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CIPGFPISHRRAWNSFWGLLTAM*LVEGWR
Trigger: CCTCCAGCCCTCAACCAATCACATGGCTGTCAACAA...GCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGGCGAACCCACTGATGTaGTCTCACTCTAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMANPLM*SHSSGV
Trigger: CACCCCACTAGAGTGAGATCACATCAGTGGGTTCGC...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGTGCCCGCGAACCCACTaGTGTGATCTCACTCTAGTG +
Preference number: 4 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMCPRTH*CDLTLV
Trigger: CACTAGAGTGAGATCACATCAGTGGGTTCGCGGGCA...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp GGTTCCCCTCCAAGGGATGTGGAAGTTGTGAGTGCATACCCCTTAGAGCTGGAGTGCCCGCGAACCCACTaGTGTGATCTCACTCTAGTG +
Preference number: 4 (lower is better)
Translates to: GSPPRDVEVVSAYPLELECPRTH*CDLTLV
Trigger: CACTAGAGTGAGATCACATCAGTGGGTTCGCGGGCA...CTCCAGCTCTAAGGGGTATGCACTCACAACTTCCACATCCCTTGGAGGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR GCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCTGGCCTCCATCTGGCTaGAGAGCCGAGCCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTAWPPSG*RAEPGG
Trigger: GCCGCCTGGCTCGGCTCTGCAGCCAGATGGAGGCCA...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GTGTGGTGGGAGTGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCACGTGGTGCTGCCCCCTaGAGGAGACAGCAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: VWWEWRRGFFPSVDIFLARGAAP*RRQQRQ
Trigger: TTGCCTCTGCTGTCTCCTGCAGGGGGCAGCACCACG...TGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCACTCCCACCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330767.4
ENST00000673610.1
CDS-3UTR GCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCACACCTCCGTCCCCTTaGAGGTGGAGCAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPTPPSP*RWSSCT
Trigger: TGTACAACTGCTCCACCTGCAAGGGGACGGAGGTGT...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp CCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTTTCACAAGCCACTTTTTaGTTGGAGGTGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: PGFPGGHLTLGLWGIWVFSQATF*LEVVGL
Trigger: GAGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGA...AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCAGCTTCTGGGGCAGATaGCCCCGCTTTCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFSFWGR*PRFPGT
Trigger: TGTTCCGGGAAAGCGGGGGCATCTGCCCCAGAAGCT...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTAGCTTCTGGGGCAGATaGCCCCGCTTTCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPSFWGR*PRFPGT
Trigger: TGTTCCGGGAAAGCGGGGGCATCTGCCCCAGAAGCT...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCAGTTGTACAGCGTGGTaGTGCCCCGGCAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTASCTAW*CPGRRG
Trigger: CCCCCGCCTGCCGGGGCAGCACCACGCTGTACAACT...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
CDS-3UTR CCA 90 bp CCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTCACATTCCTTCTGCCTaGCCTCCATCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PGFQTVNTMEGGHAREPTHIPSA*PPSGCR
Trigger: TCTGCAGCCAGATGGAGGCCAGGCAGAAGGAATGTG...AGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp ACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGATCTCAGACAGAGAGCTTCCCTaGTGTACTCAGGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TVNTMEGGHAREPTDVISDRELP*CTQGAW
Trigger: CCAAGCTCCCTGAGTACACCAGGGAAGCTCTCTGTC...TGAGATCACATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGGACAGAGAGCTTCCCTaGTGTACTCAGGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMDRELP*CTQGAW
Trigger: CCAAGCTCCCTGAGTACACCAGGGAAGCTCTCTGTC...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCAGCAGTTGTACAGCGTaGTGCTGCCCCCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFSSCTA*CCPLQE
Trigger: CTCCTGCAGGGGGCAGCACCACGCTGTACAACTGCT...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330767.4
ENST00000673610.1
CDS-3UTR CCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTCCGTCCCCTTGCAGGTaGAGCAGTTGTACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPPSPCR*SSCTAW
Trigger: CCACGCTGTACAACTGCTCCACCTGCAAGGGGACGG...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGAAGATCCTGACTTCCTaGGAAGCAGCGCTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMKILTS*EAALSG
Trigger: CCCCGAAAGCGCTGCTTCCCAGGAAGTCAGGATCTT...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR CCA 90 bp CATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGAAGATCCTGACTTCCTaGGAAGCAGCGCTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: HAFPDSPSVIGGPGIASGKILTS*EAALSG
Trigger: CCCCGAAAGCGCTGCTTCCCAGGAAGTCAGGATCTT...CCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR CCA 90 bp ATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGACTTTTTGCTTGGAGGTaGTGGGACTCCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IPGFPISHRRAWNSFWGRLFAWR*WDSTRR
Trigger: CCTCCTGGTGGAGTCCCACCACCTCCAAGCAAAAAG...TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCTTTTTGCTTGGAGGTaGTGGGACTCCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMLFAWR*WDSTRR
Trigger: CCTCCTGGTGGAGTCCCACCACCTCCAAGCAAAAAG...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CTGACTGGTTCCCCTCCAAGGGATGTGGAAGTTGTGAGTGCATACCCCTTAGAGGCCTGGAATAGCTTCTaGGGCAGATGCCCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LTGSPPRDVEVVSAYPLEAWNSF*GRCPRF
Trigger: AAAGCGGGGGCATCTGCCCCAGAAGCTATTCCAGGC...CTCTAAGGGGTATGCACTCACAACTTCCACATCCCTTGGAGGGGAACCAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR CCA 90 bp GTGTGGTGGGAGTGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTAGGCCTGGCAGGATaGAGGCCTCTGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VWWEWRRGFFPSVDIFLALGLAG*RPLREA
Trigger: GGCCTCCCTCAGAGGCCTCCATCCTGCCAGGCCTAA...TGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCACTCCCACCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAGACCTGGGACTAAGGGGCTaGCTGGTTCCCCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: FIISPTRSRDVWVLGSGDLGLRG*LVPLQG
Trigger: CCCTTGGAGGGGAACCAGTCAGCCCCTTAGTCCCAG...GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAGACTCCCGGGAGGCCATCTaGCACTGGGATTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FIISPTRSRDVWVLGSGDSREAI*HWDCGG
Trigger: TCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGA...GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTTTTTCCTGGCATTGTTaGCAGCCATGTGATTGGTTG +
Preference number: 4 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFFSWHC*QPCDWL
Trigger: CAACCAATCACATGGCTGTCAACAATGCCAGGAAAA...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
54% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp ATGGAGGCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGCGAACCCACTGATGTaGTCTCACTCTAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: MEASEGGQDFKLLTRWREANPLM*SHSSGV
Trigger: CACCCCACTAGAGTGAGATCACATCAGTGGGTTCGC...CTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATGCCCCACATTCCTTCTaGCTGGCCTCCATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNAPHSF*LASIWL
Trigger: CAGCCAGATGGAGGCCAGGCAGAAGGAATGTGGGGC...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGACACCTCCGTCCCCTTaGAGGTGGAGCAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: DFKLLTRWREGMPANPLMTPPSP*RWSSCT
Trigger: TGTACAACTGCTCCACCTGCAAGGGGACGGAGGTGT...CATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCTGTGGAAGTTGTGAGTaGATACCCCTTAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCCGSCE*IPLRAG
Trigger: TCCAGCTCTAAGGGGTATGCACTCACAACTTCCACA...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCCTTTCCAGCTGTGGGTaGCTGGGTTCCCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTALSSCG*LGSREA
Trigger: GGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAG...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp CCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTTGAGTTTTCCAGAACATaGATTCCCGGATTCCCCATC +
Preference number: 4 (lower is better)
Translates to: PGFPGGHLTLGLWGIWVFEFSRT*IPGFPI
Trigger: GATGGGGAATCCGGGAATGCATGTTCTGGAAAACTC...AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCCAGAAGACACAAGCCTaGGCGGCTGCCAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFQKTQA*AAARKT
Trigger: GGTTTTCCTGGCAGCCGCCCAGGCTTGTGTCTTCTG...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp ATGGAGGCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGCACATTCCTTCTGCCTaGCCTCCATCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MEASEGGQDFKLLTRWREHIPSA*PPSGCR
Trigger: TCTGCAGCCAGATGGAGGCCAGGCAGAAGGAATGTG...CTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGCCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATAAAGGCCGAGAAGTCTaGGGAGGCCCCACATTCCTT +
Preference number: 4 (lower is better)
Translates to: GFQTVNTMEGGHAREPTDKGREV*GGPTFL
Trigger: AAGGAATGTGGGGCCTCCCCAGACTTCTCGGCCTTT...ATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATCCGTCCCCTTGCAGGTaGAGCAGTTGTACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNPSPCR*SSCTAW
Trigger: CCACGCTGTACAACTGCTCCACCTGCAAGGGGACGG...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GTGTGGTGGGAGTGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCACCGTCCCCTTGCAGGTaGAGCAGTTGTACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: VWWEWRRGFFPSVDIFLAPSPCR*SSCTAW
Trigger: CCACGCTGTACAACTGCTCCACCTGCAAGGGGACGG...TGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCACTCCCACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CTGACTGGTTCCCCTCCAAGGGATGTGGAAGTTGTGAGTGCATACCCCTTAGAGCTTTTTGCTTGGAGGTaGTGGGACTCCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LTGSPPRDVEVVSAYPLELFAWR*WDSTRR
Trigger: CCTCCTGGTGGAGTCCCACCACCTCCAAGCAAAAAG...CTCTAAGGGGTATGCACTCACAACTTCCACATCCCTTGGAGGGGAACCAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR CCA 90 bp ATGGAGGCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGCTTTTTGCTTGGAGGTaGTGGGACTCCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: MEASEGGQDFKLLTRWRELFAWR*WDSTRR
Trigger: CCTCCTGGTGGAGTCCCACCACCTCCAAGCAAAAAG...CTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGCCTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCAAGCCACTTTTTGCTTaGAGGTGGTGGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPKPLFA*RWWDST
Trigger: GGTGGAGTCCCACCACCTCCAAGCAAAAAGTGGCTT...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp ATGGAGGCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGTGGGTGTGGTGGGAGTaGCGTAGGGGATTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: MEASEGGQDFKLLTRWREWVWWE*RRGFFP
Trigger: AGGAAAGAATCCCCTACGCCACTCCCACCACACCCA...CTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGGGTGTGGTGGGAGTaGCGTAGGGGATTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: DFKLLTRWREGMPANPLMWVWWE*RRGFFP
Trigger: AGGAAAGAATCCCCTACGCCACTCCCACCACACCCA...CATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGCCTGGAATAGCTTCTaGGGCAGATGCCCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPAWNSF*GRCPRF
Trigger: AAAGCGGGGGCATCTGCCCCAGAAGCTATTCCAGGC...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTAGTCATAGGAGGGCCTaGAATAGCTTCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PGFQTVNTMEGGHAREPTSHRRA*NSFWGR
Trigger: TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACT...AGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp CTGACTGGTTCCCCTCCAAGGGATGTGGAAGTTGTGAGTGCATACCCCTTAGAGAAACTGTTAACACGATaGAGGGAGGGCATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LTGSPPRDVEVVSAYPLEKLLTR*REGMPA
Trigger: CGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTT...CTCTAAGGGGTATGCACTCACAACTTCCACATCCCTTGGAGGGGAACCAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR TCA 90 bp CCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATGCTGTGAGTCTTCTCTGTaGCTTTGTTCATGGACACCT +
Preference number: 4 (lower is better)
Translates to: PGFPISHRRAWNSFWGRCCESSL*LCSWTP
Trigger: AGGTGTCCATGAACAAAGTCACAGAGAAGACTCACA...GCATCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCCTGGGACTAAGGGGCTaGCTGGTTCCCCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTALGLRG*LVPLQG
Trigger: CCCTTGGAGGGGAACCAGTCAGCCCCTTAGTCCCAG...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp GGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATTTGTTGACAGCCATGTaGTTGGTTGAGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GFQTVNTMEGGHAREPTDLLTAM*LVEGWR
Trigger: CCTCCAGCCCTCAACCAATCACATGGCTGTCAACAA...ATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp CCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTTTTTTCCTGGCATTGTTaGCAGCCATGTGATTGGTTG +
Preference number: 4 (lower is better)
Translates to: PGFPGGHLTLGLWGIWVFFSWHC*QPCDWL
Trigger: CAACCAATCACATGGCTGTCAACAATGCCAGGAAAA...AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGG
53% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCGCGAACCCACTGATGTaGTCTCACTCTAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFANPLM*SHSSGV
Trigger: CACCCCACTAGAGTGAGATCACATCAGTGGGTTCGC...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTACACCTCCGTCCCCTTaGAGGTGGAGCAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPTPPSP*RWSSCT
Trigger: TGTACAACTGCTCCACCTGCAAGGGGACGGAGGTGT...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp ACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGATCTCATCACAAGCCACTTTTTaGTTGGAGGTGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: TVNTMEGGHAREPTDVISSQATF*LEVVGL
Trigger: GAGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGA...TGAGATCACATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TTTTTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGACTTTCCAGCTGTGGGTaGCTGGGTTCCCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: FFIISPTRSRDVWVLGSGLSSCG*LGSREA
Trigger: GGCCTCCCGGGAACCCAGGCACCCACAGCTGGAAAG...TCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAGACAGCTTCTGGGGCAGATaGCCCCGCTTTCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: FIISPTRSRDVWVLGSGDSFWGR*PRFPGT
Trigger: TGTTCCGGGAAAGCGGGGGCATCTGCCCCAGAAGCT...GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAAGAGTTTTCCAGAACATaGATTCCCGGATTCCCCATC +
Preference number: 4 (lower is better)
Translates to: GRPGFQTVNTMEGGHAREEFSRT*IPGFPI
Trigger: GATGGGGAATCCGGGAATGCATGTTCTGGAAAACTC...TTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp ACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGATCTCATGTACTCAGGGAGCTTaGTCTTTCGAAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: TVNTMEGGHAREPTDVISCTQGA*SFEANS
Trigger: GGAGTTGGCTTCGAAAGACCAAGCTCCCTGAGTACA...TGAGATCACATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp ATGGAGGCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGCTTAGAGCTGGAGGCTaGGAGGTTTTCAGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: MEASEGGQDFKLLTRWRELRAGG*EVFSVF
Trigger: GAAGACGCTGAAAACCTCCCAGCCTCCAGCTCTAAG...CTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGCCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGTTCCCCTCCAAGGGATGTGGAAGTTGTGAGTGCATACCCCTTAGAGCTGGAGAGAAGCAGGGATGTCTaGGTTTTAGGGTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GSPPRDVEVVSAYPLELERSRDV*VLGSGD
Trigger: GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCT...CTCCAGCTCTAAGGGGTATGCACTCACAACTTCCACATCCCTTGGAGGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR CCA 90 bp ATGGAGGCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGCTGACACTGGGATTGTaGGGGATCTGGGTTTTTGGG +
Preference number: 4 (lower is better)
Translates to: MEASEGGQDFKLLTRWRELTLGL*GIWVFG
Trigger: CCCAAAAACCCAGATCCCCCACAATCCCAGTGTCAG...CTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGCCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAGACGGAACTTTCCAGCTGTaGGTGCCTGGGTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: FIISPTRSRDVWVLGSGDGTFQL*VPGFPG
Trigger: TCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCC...GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCAAACTGTTAACACGATaGAGGGAGGGCATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFKLLTR*REGMPA
Trigger: CGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTT...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTTTTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAAGCAGTTGTACAGCGTaGTGCTGCCCCGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: FFIISPTRSRDVWVLGSGSSCTA*CCPGRR
Trigger: CCGCCTGCCGGGGCAGCACCACGCTGTACAACTGCT...TCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
CDS-3UTR CCA 90 bp GTGTGGTGGGAGTGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCAGCTTCCCAAAGATCCTaGGAAGCAGCGCTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: VWWEWRRGFFPSVDIFLAASQRS*EAALSG
Trigger: CCCCGAAAGCGCTGCTTCCCAGGATCTTTGGGAAGC...TGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCACTCCCACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389982.8
ENST00000672158.1
CDS-3UTR TCA 90 bp GGTTCCCCTCCAAGGGATGTGGAAGTTGTGAGTGCATACCCCTTAGAGCTGGAGCTCACTCTAGTGGGGTaGGTTTTCCAGAACATGCAT +
Preference number: 4 (lower is better)
Translates to: GSPPRDVEVVSAYPLELELTLVG*VFQNMH
Trigger: ATGCATGTTCTGGAAAACTCACCCCACTAGAGTGAG...CTCCAGCTCTAAGGGGTATGCACTCACAACTTCCACATCCCTTGGAGGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR TCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCCTCACTCTAGTGGGGTaGGTTTTCCAGAACATGCAT +
Preference number: 4 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPLTLVG*VFQNMH
Trigger: ATGCATGTTCTGGAAAACTCACCCCACTAGAGTGAG...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCGCCCCACATTCCTTCTaGCTGGCCTCCATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTAAPHSF*LASIWL
Trigger: CAGCCAGATGGAGGCCAGGCAGAAGGAATGTGGGGC...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGTGTGGAAGTTGTGAGTaGATACCCCTTAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMCGSCE*IPLRAG
Trigger: TCCAGCTCTAAGGGGTATGCACTCACAACTTCCACA...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCTGTGGAAGTTGTGAGTaGATACCCCTTAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPCGSCE*IPLRAG
Trigger: TCCAGCTCTAAGGGGTATGCACTCACAACTTCCACA...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCAGCTTCTGGGGCAGATaGCCCCGCTTTCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTASFWGR*PRFPGT
Trigger: TGTTCCGGGAAAGCGGGGGCATCTGCCCCAGAAGCT...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GCCTCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGGAGTTTTCCAGAACATaGATTCCCGGATTCCCCATC +
Preference number: 4 (lower is better)
Translates to: ASEGGQDFKLLTRWREGMEFSRT*IPGFPI
Trigger: GATGGGGAATCCGGGAATGCATGTTCTGGAAAACTC...CATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAGACCAGAAGACACAAGCCTaGGCGGCTGCCAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: FIISPTRSRDVWVLGSGDQKTQA*AAARKT
Trigger: GGTTTTCCTGGCAGCCGCCCAGGCTTGTGTCTTCTG...GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GTGTGGTGGGAGTGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCACACATTCCTTCTGCCTaGCCTCCATCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VWWEWRRGFFPSVDIFLAHIPSA*PPSGCR
Trigger: TCTGCAGCCAGATGGAGGCCAGGCAGAAGGAATGTG...TGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCACTCCCACCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATTGTACTCAGGGAGCTTaGTCTTTCGAAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: GFQTVNTMEGGHAREPTDCTQGA*SFEANS
Trigger: GGAGTTGGCTTCGAAAGACCAAGCTCCCTGAGTACA...ATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCCCGTCCCCTTGCAGGTaGAGCAGTTGTACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTAPSPCR*SSCTAW
Trigger: CCACGCTGTACAACTGCTCCACCTGCAAGGGGACGG...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCCTTAGAGCTGGAGGCTaGGAGGTTTTCAGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFLRAGG*EVFSVF
Trigger: GAAGACGCTGAAAACCTCCCAGCCTCCAGCTCTAAG...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GTGTGGTGGGAGTGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATGGGTGTGGTGGGAGTaGCGTAGGGGATTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: VWWEWRRGFFPSVDIFLAWVWWE*RRGFFP
Trigger: AGGAAAGAATCCCCTACGCCACTCCCACCACACCCA...TGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCACTCCCACCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTAGTCATAGGAGGGCCTaGAATAGCTTCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPSHRRA*NSFWGR
Trigger: TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACT...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCAGTCATAGGAGGGCCTaGAATAGCTTCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFSHRRA*NSFWGR
Trigger: TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACT...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GTGTGGTGGGAGTGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCAAAACTGTTAACACGATaGAGGGAGGGCATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: VWWEWRRGFFPSVDIFLAKLLTR*REGMPA
Trigger: CGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTT...TGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCACTCCCACCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp CCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTTGTGAGTCTTCTCTGTaGCTTTGTTCATGGACACCT +
Preference number: 4 (lower is better)
Translates to: PGFQTVNTMEGGHAREPTCESSL*LCSWTP
Trigger: AGGTGTCCATGAACAAAGTCACAGAGAAGACTCACA...AGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCTGTGAGTCTTCTCTGTaGCTTTGTTCATGGACACCT +
Preference number: 4 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPCESSL*LCSWTP
Trigger: AGGTGTCCATGAACAAAGTCACAGAGAAGACTCACA...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATTTGTTGACAGCCATGTaGTTGGTTGAGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNLLTAM*LVEGWR
Trigger: CCTCCAGCCCTCAACCAATCACATGGCTGTCAACAA...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCTTTTCCTGGCATTGTTaGCAGCCATGTGATTGGTTG +
Preference number: 4 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPFSWHC*QPCDWL
Trigger: CAACCAATCACATGGCTGTCAACAATGCCAGGAAAA...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAGACACACCTCCGTCCCCTTaGAGGTGGAGCAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: FIISPTRSRDVWVLGSGDTPPSP*RWSSCT
Trigger: TGTACAACTGCTCCACCTGCAAGGGGACGGAGGTGT...GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTTCACAAGCCACTTTTTaGTTGGAGGTGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPSQATF*LEVVGL
Trigger: GAGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGA...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAGACGACAGAGAGCTTCCCTaGTGTACTCAGGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FIISPTRSRDVWVLGSGDDRELP*CTQGAW
Trigger: CCAAGCTCCCTGAGTACACCAGGGAAGCTCTCTGTC...GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAGACAAGATCCTGACTTCCTaGGAAGCAGCGCTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: FIISPTRSRDVWVLGSGDKILTS*EAALSG
Trigger: CCCCGAAAGCGCTGCTTCCCAGGAAGTCAGGATCTT...GTCTCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR CCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAAGCCACTTTTTGCTTaGAGGTGGTGGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNKPLFA*RWWDST
Trigger: GGTGGAGTCCCACCACCTCCAAGCAAAAAGTGGCTT...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATCTGACACTGGGATTGTaGGGGATCTGGGTTTTTGGG +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNLTLGL*GIWVFG
Trigger: CCCAAAAACCCAGATCCCCCACAATCCCAGTGTCAG...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCATGTGATTCCAGCTGTGGGTGCCTaGGTTCCCGGGAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: GILSFCRYFPGIVDSHVIPAVGA*VPGRPS
Trigger: AGATGGCCTCCCGGGAACCCAGGCACCCACAGCTGG...AATCACATGGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp GATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTGTGAGTCTTCTCTGTaGCTTTGTTCATGGACACCT +
Preference number: 4 (lower is better)
Translates to: DFKLLTRWREGMPANPLMCESSL*LCSWTP
Trigger: AGGTGTCCATGAACAAAGTCACAGAGAAGACTCACA...CATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp GATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGTTTTCCTGGCATTGTTaGCAGCCATGTGATTGGTTG +
Preference number: 4 (lower is better)
Translates to: DFKLLTRWREGMPANPLMFSWHC*QPCDWL
Trigger: CAACCAATCACATGGCTGTCAACAATGCCAGGAAAA...CATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCCTCACTCTAGTGGGGTaGGTTTTCCAGAACATGCAT +
Preference number: 4 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFLTLVG*VFQNMH
Trigger: ATGCATGTTCTGGAAAACTCACCCCACTAGAGTGAG...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCTGCCCGCGAACCCACTaGTGTGATCTCACTCTAGTG +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTACPRTH*CDLTLV
Trigger: CACTAGAGTGAGATCACATCAGTGGGTTCGCGGGCA...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATTCACAAGCCACTTTTTaGTTGGAGGTGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNSQATF*LEVVGL
Trigger: GAGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGA...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GTGTGGTGGGAGTGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATGTACTCAGGGAGCTTaGTCTTTCGAAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: VWWEWRRGFFPSVDIFLACTQGA*SFEANS
Trigger: GGAGTTGGCTTCGAAAGACCAAGCTCCCTGAGTACA...TGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCACTCCCACCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATTGTACTCAGGGAGCTTaGTCTTTCGAAGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNCTQGA*SFEANS
Trigger: GGAGTTGGCTTCGAAAGACCAAGCTCCCTGAGTACA...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCGACAGAGAGCTTCCCTaGTGTACTCAGGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTADRELP*CTQGAW
Trigger: CCAAGCTCCCTGAGTACACCAGGGAAGCTCTCTGTC...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCATGTGATTGGGGTGTGGGTGTGGTaGGAGTGGCGTAGGGGATTC +
Preference number: 4 (lower is better)
Translates to: GILSFCRYFPGIVDSHVIGVWVW*EWRRGF
Trigger: GAATCCCCTACGCCACTCCCACCACACCCACACCCC...AATCACATGGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTTTTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAAAAGGCCGAGAAGTCTaGGGAGGCCCCACATTCCTT +
Preference number: 4 (lower is better)
Translates to: FFIISPTRSRDVWVLGSGKGREV*GGPTFL
Trigger: AAGGAATGTGGGGCCTCCCCAGACTTCTCGGCCTTT...TCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TTTTTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAGACAGAGAGCTTCCCTaGTGTACTCAGGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FFIISPTRSRDVWVLGSGDRELP*CTQGAW
Trigger: CCAAGCTCCCTGAGTACACCAGGGAAGCTCTCTGTC...TCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCCTTAGAGCTGGAGGCTaGGAGGTTTTCAGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTALRAGG*EVFSVF
Trigger: GAAGACGCTGAAAACCTCCCAGCCTCCAGCTCTAAG...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCCTGACACTGGGATTGTaGGGGATCTGGGTTTTTGGG +
Preference number: 4 (lower is better)
Translates to: WRRGFFPSVDIFLALLTALTLGL*GIWVFG
Trigger: CCCAAAAACCCAGATCCCCCACAATCCCAGTGTCAG...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TTTTTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGATTGTTGACAGCCATGTaGTTGGTTGAGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FFIISPTRSRDVWVLGSGLLTAM*LVEGWR
Trigger: CCTCCAGCCCTCAACCAATCACATGGCTGTCAACAA...TCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR TCA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATTTTTCCTGGCATTGTTaGCAGCCATGTGATTGGTTG +
Preference number: 4 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNFSWHC*QPCDWL
Trigger: CAACCAATCACATGGCTGTCAACAATGCCAGGAAAA...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCATGTGATTAAACTGTTAACACGATaGAGGGAGGGCATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: GILSFCRYFPGIVDSHVIKLLTR*REGMPA
Trigger: CGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTT...AATCACATGGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TTTTTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGATGTGGAAGTTGTGAGTaGATACCCCTTAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FFIISPTRSRDVWVLGSGCGSCE*IPLRAG
Trigger: TCCAGCTCTAAGGGGTATGCACTCACAACTTCCACA...TCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp TTTTTCATTATCTCACCAACCAGAAGCAGGGATGTCTGGGTTTTAGGGTCTGGAGAGTTTTCCAGAACATaGATTCCCGGATTCCCCATC +
Preference number: 4 (lower is better)
Translates to: FFIISPTRSRDVWVLGSGEFSRT*IPGFPI
Trigger: GATGGGGAATCCGGGAATGCATGTTCTGGAAAACTC...TCCAGACCCTAAAACCCAGACATCCCTGCTTCTGGTTGGTGAGATAATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CCA 90 bp GGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCATGTGATTCTGACACTGGGATTGTaGGGGATCTGGGTTTTTGGG +
Preference number: 4 (lower is better)
Translates to: GILSFCRYFPGIVDSHVILTLGL*GIWVFG
Trigger: CCCAAAAACCCAGATCCCCCACAATCCCAGTGTCAG...AATCACATGGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR GCA 90 bp GGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCATGTGATTTCACAAGCCACTTTTTaGTTGGAGGTGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: GILSFCRYFPGIVDSHVISQATF*LEVVGL
Trigger: GAGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGA...AATCACATGGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS GCA 90 bp AGGACACCTCCGTCCCCTTGCAGGTGGAGCAGTTGTACAGCGTGGTaGTGCCCCCTGCAGGAGACAGCAGAGGCAACGGGCAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: RTPPSPCRWSSCTAW*CPLQETAEATGRRG
Trigger: CCCCCGCCTGCCCGTTGCCTCTGCTGTCTCCTGCAGGGGGCAGCACCACGCTGTACAACTGCTCCACCTGCAAGGGGACGGAGGTGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330767.4
ENST00000673610.1
CDS CCA 90 bp AGCAGGACACCTCCGTCCCCTTGCAGGTGGAGCAGTTGTACAGCGTaGTGCTGCCCCCTGCAGGAGACAGCAGAGGCAACGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SRTPPSPCRWSSCTA*CCPLQETAEATGRR
Trigger: CCGCCTGCCCGTTGCCTCTGCTGTCTCCTGCAGGGGGCAGCACCACGCTGTACAACTGCTCCACCTGCAAGGGGACGGAGGTGTCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330767.4
ENST00000673610.1
CDS CCA 90 bp CGGCCTGACAAGTCGTGGGCTGGGAGGCGACAGAAGACACAAGCCTaGGCGGCTGCCAGGAAAACCCCGCCTAGTGCCAGCCTCCACATG +
Preference number: 5 (lower is better)
Translates to: RPDKSWAGRRQKTQA*AAARKTPPSASLHM
Trigger: CATGTGGAGGCTGGCACTAGGCGGGGTTTTCCTGGCAGCCGCCCAGGCTTGTGTCTTCTGTCGCCTCCCAGCCCACGACTTGTCAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673329.3
ENST00000673610.1
CDS-3UTR CAA 90 bp TGTGATTGGTTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTTGCAGGTGGAGCAGTaGTACAGCGTGGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: CDWLRAGGEELSSCGCLGLQVEQ*YSVVLP
Trigger: GGGCAGCACCACGCTGTACAACTGCTCCACCTGCAA...ACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAACCAATCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp TGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCTTGCAGGTGGAGCAGTaGTACAGCGTGGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: CIPGFPISHRRAWNSFWGLQVEQ*YSVVLP
Trigger: GGGCAGCACCACGCTGTACAACTGCTCCACCTGCAA...GCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp GGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAAGACACCTCCGTCCCCTaGCAGGTGGAGCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: GRPGFQTVNTMEGGHAREDTSVP*QVEQLY
Trigger: GTACAACTGCTCCACCTGCAAGGGGACGGAGGTGTC...TTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp TGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCGACACCTCCGTCCCCTaGCAGGTGGAGCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: CIPGFPISHRRAWNSFWGDTSVP*QVEQLY
Trigger: GTACAACTGCTCCACCTGCAAGGGGACGGAGGTGTC...GCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp GCCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTGTGTACTCAGGGAGCTaGGTCTTTCGAAGCCAACTC +
Preference number: 5 (lower is better)
Translates to: AWVPGRPSDTGIVGDLGFVYSGS*VFRSQL
Trigger: GAGTTGGCTTCGAAAGACCAAGCTCCCTGAGTACAC...AAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp TTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTTCCCGGGAGGTCTTCTCTGTGACTTaGTTCATGGACACCTCATCT +
Preference number: 5 (lower is better)
Translates to: LRAGGEELSSCGCLGSREVFSVT*FMDTSS
Trigger: AGATGAGGTGTCCATGAACAAAGTCACAGAGAAGAC...CTCCCGGGAACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp TGTGATTGGTTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTGAGGAGACAGCCTCTTaGATTTCCATGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: CDWLRAGGEELSSCGCLGEETAS*ISMTLR
Trigger: CCTGAGGGTCATGGAAATCAAAGAGGCTGTCTCCTC...ACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAACCAATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp TGTGATTGGTTGAGGGCTGGAGGGGAGGAACTTTCCAGCTGTGGGTGCCTGGGTGTGTACTCAGGGAGCTaGGTCTTTCGAAGCCAACTC +
Preference number: 5 (lower is better)
Translates to: CDWLRAGGEELSSCGCLGVYSGS*VFRSQL
Trigger: GAGTTGGCTTCGAAAGACCAAGCTCCCTGAGTACAC...ACCCAGGCACCCACAGCTGGAAAGTTCCTCCCCTCCAGCCCTCAACCAATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp CCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTTGTGTACTCAGGGAGCTaGGTCTTTCGAAGCCAACTC +
Preference number: 5 (lower is better)
Translates to: PGFPGGHLTLGLWGIWVFVYSGS*VFRSQL
Trigger: GAGTTGGCTTCGAAAGACCAAGCTCCCTGAGTACAC...AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp GGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGACACCTCCGTCCCCTaGCAGGTGGAGCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: GFQTVNTMEGGHAREPTDDTSVP*QVEQLY
Trigger: GTACAACTGCTCCACCTGCAAGGGGACGGAGGTGTC...ATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp CCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTTGAGAGGAGCAGAATCTaGGCTTCCCAAAGATCCTGG +
Preference number: 5 (lower is better)
Translates to: PGFPGGHLTLGLWGIWVFERSRI*ASQRSW
Trigger: CCAGGATCTTTGGGAAGCCAAGATTCTGCTCCTCTC...AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389982.8
ENST00000672158.1
CDS CCA 90 bp CACCCAGAAGCAGGAAAGCTCCGAAGATGGAGAGGAGCAGAATCTTaGCTTCCCAAAGATCCTGACTTCCTGGGAAGCAGCGCTTTCGGG +
Preference number: 5 (lower is better)
Translates to: HPEAGKLRRWRGAES*LPKDPDFLGSSAFG
Trigger: CCCGAAAGCGCTGCTTCCCAGGAAGTCAGGATCTTTGGGAAGCCAAGATTCTGCTCCTCTCCATCTTCGGAGCTTTCCTGCTTCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673329.3
ENST00000673610.1
CDS-3UTR CAA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTTTGCAGGTGGAGCAGTaGTACAGCGTGGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPLQVEQ*YSVVLP
Trigger: GGGCAGCACCACGCTGTACAACTGCTCCACCTGCAA...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp AGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCGACACCTCCGTCCCCTaGCAGGTGGAGCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: RTCIPGFPISHRRAWNSFDTSVP*QVEQLY
Trigger: GTACAACTGCTCCACCTGCAAGGGGACGGAGGTGTC...GAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp TCTGAGGGAGGCCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCCAAGCCACTTTTTGCTaGGAGGTGGTGGGACTCCAC +
Preference number: 5 (lower is better)
Translates to: SEGGQDFKLLTRWREGMPQATFC*EVVGLH
Trigger: GTGGAGTCCCACCACCTCCAAGCAAAAAGTGGCTTG...GGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGGCCTCCCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp CCAGGATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTCAAGCCACTTTTTGCTaGGAGGTGGTGGGACTCCAC +
Preference number: 5 (lower is better)
Translates to: PGFQTVNTMEGGHAREPTQATFC*EVVGLH
Trigger: GTGGAGTCCCACCACCTCCAAGCAAAAAGTGGCTTG...AGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp CCTGGGTTCCCGGGAGGCCATCTGACACTGGGATTGTGGGGGATCTGGGTTTTTTTCACAAGCCACTTTTaGCTTGGAGGTGGTGGGACT +
Preference number: 5 (lower is better)
Translates to: PGFPGGHLTLGLWGIWVFFTSHF*LGGGGT
Trigger: AGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGAA...AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCGGGAACCCAGG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp TTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATGACACCTCCGTCCCCTaGCAGGTGGAGCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: FSRTCIPGFPISHRRAWNDTSVP*QVEQLY
Trigger: GTACAACTGCTCCACCTGCAAGGGGACGGAGGTGTC...ATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp ATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGATTCACAAGCCACTTTTaGCTTGGAGGTGGTGGGACT +
Preference number: 5 (lower is better)
Translates to: IPGFPISHRRAWNSFWGRFTSHF*LGGGGT
Trigger: AGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGAA...TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp ATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGGAATAGCTTCTGGGGCAGACATCTGACACTGGGATaGTGGGGGATCTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: IPGFPISHRRAWNSFWGRHLTLG*WGIWVF
Trigger: AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATG...TCTGCCCCAGAAGCTATTCCAGGCCCTCCTATGACTGATGGGGAATCCGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp GATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGGAGAGGAGCAGAATCTaGGCTTCCCAAAGATCCTGG +
Preference number: 5 (lower is better)
Translates to: DFKLLTRWREGMPANPLMERSRI*ASQRSW
Trigger: CCAGGATCTTTGGGAAGCCAAGATTCTGCTCCTCTC...CATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389982.8
ENST00000672158.1
CDS-3UTR CAA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCTTGCAGGTGGAGCAGTaGTACAGCGTGGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: WRRGFFPSVDIFLALLTALQVEQ*YSVVLP
Trigger: GGGCAGCACCACGCTGTACAACTGCTCCACCTGCAA...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp GTGTGGTGGGAGTGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCACAAGCCACTTTTTGCTaGGAGGTGGTGGGACTCCAC +
Preference number: 5 (lower is better)
Translates to: VWWEWRRGFFPSVDIFLAQATFC*EVVGLH
Trigger: GTGGAGTCCCACCACCTCCAAGCAAAAAGTGGCTTG...TGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCACTCCCACCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp GATTTCAAACTGTTAACACGATGGAGGGAGGGCATGCCCGCGAACCCACTGATGCATCTGACACTGGGATaGTGGGGGATCTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: DFKLLTRWREGMPANPLMHLTLG*WGIWVF
Trigger: AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATG...CATCAGTGGGTTCGCGGGCATGCCCTCCCTCCATCGTGTTAACAGTTTGAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp GGTTCCCCTCCAAGGGATGTGGAAGTTGTGAGTGCATACCCCTTAGAGCTGGAGGTCTTCTCTGTGACTTaGTTCATGGACACCTCATCT +
Preference number: 5 (lower is better)
Translates to: GSPPRDVEVVSAYPLELEVFSVT*FMDTSS
Trigger: AGATGAGGTGTCCATGAACAAAGTCACAGAGAAGAC...CTCCAGCTCTAAGGGGTATGCACTCACAACTTCCACATCCCTTGGAGGGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330767.4
ENST00000576060.6
ENST00000673610.1
CDS-3UTR CAA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTTTCACAAGCCACTTTTaGCTTGGAGGTGGTGGGACT +
Preference number: 5 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPFTSHF*LGGGGT
Trigger: AGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGAA...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp GTGTGGTGGGAGTGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTCACAAGCCACTTTTaGCTTGGAGGTGGTGGGACT +
Preference number: 5 (lower is better)
Translates to: VWWEWRRGFFPSVDIFLAFTSHF*LGGGGT
Trigger: AGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGAA...TGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCACTCCCACCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp GTGAGTTTTCCAGAACATGCATTCCCGGATTCCCCATCAGTCATAGGAGGGCCTGTCTTCTCTGTGACTTaGTTCATGGACACCTCATCT +
Preference number: 5 (lower is better)
Translates to: VSFPEHAFPDSPSVIGGPVFSVT*FMDTSS
Trigger: AGATGAGGTGTCCATGAACAAAGTCACAGAGAAGAC...AGGCCCTCCTATGACTGATGGGGAATCCGGGAATGCATGTTCTGGAAAACTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCCATCTGACACTGGGATaGTGGGGGATCTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: WRRGFFPSVDIFLALLTAHLTLG*WGIWVF
Trigger: AAAAACCCAGATCCCCCACAATCCCAGTGTCAGATG...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp GGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCATGTGATTCAAGCCACTTTTTGCTaGGAGGTGGTGGGACTCCAC +
Preference number: 5 (lower is better)
Translates to: GILSFCRYFPGIVDSHVIQATFC*EVVGLH
Trigger: GTGGAGTCCCACCACCTCCAAGCAAAAAGTGGCTTG...AATCACATGGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS-3UTR CAA 90 bp TGGCGTAGGGGATTCTTTCCTTCTGTAGATATTTTCCTGGCATTGTTGACAGCCGTCTTCTCTGTGACTTaGTTCATGGACACCTCATCT +
Preference number: 5 (lower is better)
Translates to: WRRGFFPSVDIFLALLTAVFSVT*FMDTSS
Trigger: AGATGAGGTGTCCATGAACAAAGTCACAGAGAAGAC...GGCTGTCAACAATGCCAGGAAAATATCTACAGAAGGAAAGAATCCCCTACGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673610.1
CDS CCA 72 bp TGGCTGCAGAGCCGAGCCAGGCGGCCTGACAAGTCGTaGGCTGGGAGGCGACAGAAGACACAAGCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: WLQSRARRPDKS*AGRRQKTQAWA
Trigger: CGCCCAGGCTTGTGTCTTCTGTCGCCTCCCAGCCCACGACTTGTCAGGCCGCCTGGCTCGGCTCTGCAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673329.3
ENST00000673610.1
CDS CCA 72 bp CCTAGTGCCAGCCTCCACATGAGGACCACTGGGGGATaGGGCGGCGCTGCCCCAGCTGAGCCGAGGAATGCT +
Preference number: 6 (lower is better)
Translates to: PSASLHMRTTGG*GGAAPAEPRNA
Trigger: AGCATTCCTCGGCTCAGCTGGGGCAGCGCCGCCCCATCCCCCAGTGGTCCTCATGTGGAGGCTGGCACTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389982.8
ENST00000672158.1
CDS GCA 72 bp AGCGCTTTCGGGGCCAGCAGGACACCTCCGTCCCCTTaGAGGTGGAGCAGTTGTACAGCGTGGTGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: SAFGASRTPPSP*RWSSCTAWCCP
Trigger: GGGGCAGCACCACGCTGTACAACTGCTCCACCTGCAAGGGGACGGAGGTGTCCTGCTGGCCCCGAAAGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673329.3
ENST00000673610.1
CDS CAA 72 bp CAGCGCTTTCGGGGCCAGCAGGACACCTCCGTCCCCTaGCAGGTGGAGCAGTTGTACAGCGTGGTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: QRFRGQQDTSVP*QVEQLYSVVLP
Trigger: GGGCAGCACCACGCTGTACAACTGCTCCACCTGCAAGGGGACGGAGGTGTCCTGCTGGCCCCGAAAGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673329.3
ENST00000673610.1
CDS CCA 72 bp AAGTCGTGGGCTGGGAGGCGACAGAAGACACAAGCCTaGGCGGCTGCCAGGAAAACCCCGCCTAGTGCCAGC +
Preference number: 6 (lower is better)
Translates to: KSWAGRRQKTQA*AAARKTPPSAS
Trigger: GCTGGCACTAGGCGGGGTTTTCCTGGCAGCCGCCCAGGCTTGTGTCTTCTGTCGCCTCCCAGCCCACGACTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673329.3
ENST00000673610.1
CDS CAA 72 bp CAGCAGGACACCTCCGTCCCCTTGCAGGTGGAGCAGTaGTACAGCGTGGTGCTGCCCCCTGCAGGAGACAGC +
Preference number: 6 (lower is better)
Translates to: QQDTSVPLQVEQ*YSVVLPPAGDS
Trigger: GCTGTCTCCTGCAGGGGGCAGCACCACGCTGTACAACTGCTCCACCTGCAAGGGGACGGAGGTGTCCTGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330767.4
ENST00000673610.1
CDS GCA 72 bp GCTGGGAGGTTTTCAGCGTCTTCACAAGCCACTTTTTaGTTGGAGGTGGTGGGACTCCACCAGGAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: AGRFSASSQATF*LEVVGLHQEAQ
Trigger: CTGAGCCTCCTGGTGGAGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGAAGACGCTGAAAACCTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673329.3
ENST00000673610.1
CDS CAA 72 bp GGCTGGGAGGTTTTCAGCGTCTTCACAAGCCACTTTTaGCTTGGAGGTGGTGGGACTCCACCAGGAGGCTCA +
Preference number: 6 (lower is better)
Translates to: GWEVFSVFTSHF*LGGGGTPPGGS
Trigger: TGAGCCTCCTGGTGGAGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGAAGACGCTGAAAACCTCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673329.3
ENST00000673610.1
CDS CAA 72 bp GGGAGGTTTTCAGCGTCTTCACAAGCCACTTTTTGCTaGGAGGTGGTGGGACTCCACCAGGAGGCTCAGAAC +
Preference number: 6 (lower is better)
Translates to: GRFSASSQATFC*EVVGLHQEAQN
Trigger: GTTCTGAGCCTCCTGGTGGAGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGAAGACGCTGAAAACCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673329.3
ENST00000673610.1
CDS CCA 72 bp GGAGGTTTTCAGCGTCTTCACAAGCCACTTTTTGCTTaGAGGTGGTGGGACTCCACCAGGAGGCTCAGAACA +
Preference number: 6 (lower is better)
Translates to: GGFQRLHKPLFA*RWWDSTRRLRT
Trigger: TGTTCTGAGCCTCCTGGTGGAGTCCCACCACCTCCAAGCAAAAAGTGGCTTGTGAAGACGCTGAAAACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330767.4
ENST00000389982.8
ENST00000576060.6
ENST00000672158.1
ENST00000673329.3
ENST00000673610.1
CDS CAA 72 bp AGCAGGAAAGCTCCGAAGATGGAGAGGAGCAGAATCTaGGCTTCCCAAAGATCCTGGGAAGCAGCGCTTTCG +
Preference number: 6 (lower is better)
Translates to: SRKAPKMERSRI*ASQRSWEAALS
Trigger: CGAAAGCGCTGCTTCCCAGGATCTTTGGGAAGCCAAGATTCTGCTCCTCTCCATCTTCGGAGCTTTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389982.8
ENST00000672158.1