RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM94 (Homo sapiens)

Ensembl gene IDs: ENSG00000177728

Ensembl transcript IDs: ENST00000314256.12, ENST00000375248.9, ENST00000577194.1, ENST00000577245.1, ENST00000577247.5, ENST00000577380.5, ENST00000578624.1, ENST00000578853.1, ENST00000579208.5, ENST00000579241.1, ENST00000579707.1, ENST00000579898.5, ENST00000580416.5, ENST00000580441.5, ENST00000580918.1, ENST00000581085.5, ENST00000581252.5, ENST00000581453.1, ENST00000581519.5, ENST00000581723.5, ENST00000581834.1, ENST00000581867.1, ENST00000582186.5, ENST00000582455.5, ENST00000582843.1, ENST00000583071.1, ENST00000583296.1, ENST00000583795.1, ENST00000584383.1, ENST00000584694.1, ENST00000585105.5, ENST00000585277.1

Found 849 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTaGGGGGCAAGGGATCTCCAAGGGGGCAAGGGATCCCTAAAGGGG +
Preference number: 1 (lower is better)
Translates to: RLASRPCPGTHEQRH*GARDLQGGKGSLKG
Trigger: CCCCTTTAGGGATCCCTTGCCCCCTTGGAGATCCCTTGCCCCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
3UTR GCA 90 bp ACGGCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTaGTCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCC +
Preference number: 1 (lower is better)
Translates to: TAALGVGRVGQGCCC*SSKEGWLQGRVQGP
Trigger: GGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR GCA 90 bp CCCTCCACGGCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTaGTGTTGCTCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAG +
Preference number: 1 (lower is better)
Translates to: PSTAALGVGRVGQGC*CCSSKEGWLQGRVQ
Trigger: CTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR CCA 90 bp GATGGAGGAAGGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTaGGCAGACCCTGGAGTGGCCTTACAGACCAGCCACAGGTATTTC +
Preference number: 1 (lower is better)
Translates to: DGGRFRPPFASHRRG*ADPGVALQTSHRYF
Trigger: GAAATACCTGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACCTTCCTCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR GCA 90 bp GGACAGGCTCAGCATCTCCAGGTGGTAGTCACACACAAAGTCCTCTaGTTCGTAGGGGTCGCTCTCCATCCCAGGCTGGGTCCTCTTCCA +
Preference number: 1 (lower is better)
Translates to: GQAQHLQVVVTHKVL*FVGVALHPRLGPLP
Trigger: TGGAAGAGGACCCAGCCTGGGATGGAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGTGACTACCACCTGGAGATGCTGAGCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR GCA 90 bp AGCAGCACATTGAGGCCCAGGGGTTTGAGGGAGGTGAGGTGCAGCTaGCAGTTGGAGTCATCAAACTGGATGCAGGAGGGGTTCTGCTGG +
Preference number: 1 (lower is better)
Translates to: SSTLRPRGLREVRCS*QLESSNWMQEGFCW
Trigger: CCAGCAGAACCCCTCCTGCATCCAGTTTGATGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAAACCCCTGGGCCTCAATGTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR CCA 90 bp GGTTTGAGGGAGGTGAGGTGCAGCTGCCAGTTGGAGTCATCAAACTaGATGCAGGAGGGGTTCTGCTGGTCCTGGGACAGGCTCAGCATC +
Preference number: 1 (lower is better)
Translates to: GLREVRCSCQLESSN*MQEGFCWSWDRLSI
Trigger: GATGCTGAGCCTGTCCCAGGACCAGCAGAACCCCTCCTGCATCCAGTTTGATGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR TCA 90 bp GGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATaGTACAAACTCCCCTGTTCAGAAATGGGTCTGGCTTTAGCCCCA +
Preference number: 1 (lower is better)
Translates to: GFPVPRVQEQTWKHS*YKLPCSEMGLALAP
Trigger: TGGGGCTAAAGCCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
3UTR-3UTR TCA 90 bp GCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACAGGCAGCCAGCTTaGGCCAGGCACAGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: ASLCQPPPGVGRPWSGLTDRQPA*ARHRKR
Trigger: CCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTC...TGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR-3UTR CCA 90 bp AAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGCCTCCACGGCAGCCTTaGGAGTTGGACGCGTCGGCC +
Preference number: 2 (lower is better)
Translates to: KRGPCSIFRFRRETPPQRPPRQP*ELDASA
Trigger: GGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGAGG...CCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR-3UTR CCA 90 bp AAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGCACGAGCAGAGGCACTaGGGGGCAAGGGATCTCCAA +
Preference number: 2 (lower is better)
Translates to: KRGPCSIFRFRRETPPQRHEQRH*GARDLQ
Trigger: TTGGAGATCCCTTGCCCCCCAGTGCCTCTGCTCGTG...CCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR-3UTR CCA 90 bp GAGGGACCCACCCGCGTAGATGGAGGAAGGTTTAGGCCTCCCTTTGCCAGCCACGGCAGCCTTGGGAGTTaGACGCGTCGGCCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: EGPTRVDGGRFRPPFASHGSLGS*TRRPRL
Trigger: CAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCC...GTGGCTGGCAAAGGGAGGCCTAAACCTTCCTCCATCTACGCGGGTGGGTCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR-3UTR TCA 90 bp GGCTCCAGGGCGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCTCTAGGGAGCGCCTaGGGCCATACATTCAAGAGT +
Preference number: 2 (lower is better)
Translates to: GSRAKRGPCSIFRFRRETPLGSA*GHTFKS
Trigger: ACTCTTGAATGTATGGCCTCAGGCGCTCCCTAGAGG...AGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCGCCCTGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR-3UTR CCA 90 bp ACGGCGCTGTGGCTCTCTTGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCGGCTCTCCATCCCAGGCTaGGTCCTCTTCCACCCGCTC +
Preference number: 2 (lower is better)
Translates to: TALWLSCRAMLHRWSENRLSIPG*VLFHPL
Trigger: GAGCGGGTGGAAGAGGACCCAGCCTGGGATGGAGAG...CCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR CCA 90 bp GTCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGCAGGAGGGGTTCTGCTaGTCCTGGGACAGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: VGESAQALGDAGITQVQQQEGFC*SWDRLS
Trigger: GCTGAGCCTGTCCCAGGACCAGCAGAACCCCTCCTG...CTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR CAA 90 bp CACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGCACATaGAGGCCCAGGGGTTTGAGGGAGGTGAGGTGCAGCTGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: HRRSVTLASHRFSST*RPRGLREVRCSCQL
Trigger: CAACTGGCAGCTGCACCTCACCTCCCTCAAACCCCTGGGCCTCAATGTGCTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR TCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCGAAGACAGCGGGGTCTaGCACGGGGAGCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGEDSGV*HGELGF
Trigger: GAAACCCAGCTCCCCGTGTCAGACCCCGCTGTCTTC...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
3UTR-3UTR TCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGCAAGAGTGTCCCTGGTaGGGCCCAGGGAAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGQECPW*GPGKSQ
Trigger: CTGGCTCTTCCCTGGGCCTCACCAGGGACACTCTTG...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
3UTR-3UTR TCA 90 bp CTCTTGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCGGTCCACCCGCTCCCTCCTaGAATCCGCTTCCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: LLQGDVAQVVGESAQALGPPAPS*NPLPVL
Trigger: AAGGACAGGAAGCGGATTTCAGGAGGGAGCGGGTGG...ACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR CCA 90 bp GTCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGGGGTTCTGCTGGTCCTaGGACAGGCTCAGCATCTCC +
Preference number: 2 (lower is better)
Translates to: VGESAQALGDAGITQVQQGFCWS*DRLSIS
Trigger: GGAGATGCTGAGCCTGTCCCAGGACCAGCAGAACCC...CTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR GCA 90 bp AGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCTTGAGGGAGGTGAGGTaGAGCTGCCAGTTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: RWSENRHRRSVTLASHRFLREVR*SCQLES
Trigger: TGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAA...GAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR CCA 90 bp CGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCCACAGGTATTTCTTATCTGACACGGGGAGCTaGGTTTCCAGTGCCACGGGT +
Preference number: 2 (lower is better)
Translates to: RGWADPGVALQTSHRYFLSDTGS*VSSATG
Trigger: ACCCGTGGCACTGGAAACCCAGCTCCCCGTGTCAGA...TAAGAAATACCTGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR-3UTR GCA 90 bp TCCCCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGCAAGGCTGCTGCTGTTaGTCCTCCAAAGAAGGTTGG +
Preference number: 2 (lower is better)
Translates to: SPRLTGSQLEPGTGRGSRQGCCC*SSKEGW
Trigger: CCAACCTTCTTTGGAGGAGCAACAGCAGCAGCCTTG...CCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR-3UTR GCA 90 bp GCACGGCGCTGTGGCTCTCTTGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCGAGGTGAGGTGCAGCTaGCAGTTGGAGTCATCAAAC +
Preference number: 2 (lower is better)
Translates to: ARRCGSLAGRCCTGGRRIEVRCS*QLESSN
Trigger: GTTTGATGACTCCAACTGGCAGCTGCACCTCACCTC...GATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR CCA 90 bp AGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCGGTGCAGCTGCCAGTTaGAGTCATCAAACTGGATGC +
Preference number: 2 (lower is better)
Translates to: RWSENRHRRSVTLASHRFGAAAS*SHQTGC
Trigger: GCATCCAGTTTGATGACTCCAACTGGCAGCTGCACC...GAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGACCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR CAA 90 bp ACGCTGGCATCACACAGGTTCAGCAGCACATTGAGGCCCAGGGGTTaGAGGGAGGTGAGGTGCAGCTGCCAGTTGGAGTCATCAAACTGG +
Preference number: 2 (lower is better)
Translates to: TLASHRFSSTLRPRG*REVRCSCQLESSNW
Trigger: CCAGTTTGATGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAAACCCCTGGGCCTCAATGTGCTGCTGAACCTGTGTGATGCCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR GCA 90 bp GATGCAGGAGGGGTTCTGCTGGTCCTGGGACAGGCTCAGCATCTCCAGGTGGTAACACACAAAGTCCTCTaGTTCGTAGGGGTCGCTCTC +
Preference number: 2 (lower is better)
Translates to: DAGGVLLVLGQAQHLQVVTHKVL*FVGVAL
Trigger: GAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGT...TACCACCTGGAGATGCTGAGCCTGTCCCAGGACCAGCAGAACCCCTCCTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR GCA 90 bp TTGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGTCATCAAACTGGATaGAGGAGGGGTTCTGCTGGT +
Preference number: 2 (lower is better)
Translates to: LHRWSENRHRRSVTLASHSHQTG*RRGSAG
Trigger: ACCAGCAGAACCCCTCCTGCATCCAGTTTGATGACT...GTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR CCA 90 bp GCAGCGCAGCATTTCCTGAGAGGAGACAGCCTCCGTATAGCTGCTGAGAGTATCAGGACGCCATTCACCTaGAGCTGGAGGAGGGTGTAC +
Preference number: 2 (lower is better)
Translates to: AAQHFLRGDSLRIAAESIRTPFT*SWRRVY
Trigger: GTACACCCTCCTCCAGCTCCAGGTGAATGGCGTCCT...GATACTCTCAGCAGCTATACGGAGGCTGTCTCCTCTCAGGAAATGCTGCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580441.5
3UTR-3UTR GCA 90 bp GGCGATGTTGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCTCTTGGGCTCCTGTCTaGTTCTATGGACTATTAATA +
Preference number: 2 (lower is better)
Translates to: GDVAQVVGESAQALGDAGSWAPV*FYGLLI
Trigger: TATTAATAGTCCATAGAAGCAGACAGGAGCCCAAGA...GCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR GCA 90 bp AAATGGAATTTATTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCTTCCAGTGCCACGGGTaGAGGAGCAAACCTGGAAAC +
Preference number: 2 (lower is better)
Translates to: KWNLFYQLPERTQWGRGFFQCHG*RSKPGN
Trigger: GTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAA...GAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAATAAATTCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR-3UTR CAA 90 bp GGCTCCAGGGCGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCGGCAGCCTTGGGAGTaGGACGCGTCGGCCAAGGCT +
Preference number: 3 (lower is better)
Translates to: GSRAKRGPCSIFRFRRETRQPWE*DASAKA
Trigger: AGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCG...AGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCGCCCTGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR GCA 72 bp GGCACAGGAAGAGGCTCCAGGGCGAAGCGGGGGCCCTaGTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCA +
Preference number: 3 (lower is better)
Translates to: GTGRGSRAKRGP*SIFRFRRETPP
Trigger: TGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCGCCCTGGAGCCTCTTCCTGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR CCA 72 bp TCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTaGGGGGCAAGGGATCTCCAAGGGGGCAAGGGATCC +
Preference number: 3 (lower is better)
Translates to: SRPCPGTHEQRH*GARDLQGGKGS
Trigger: GGATCCCTTGCCCCCTTGGAGATCCCTTGCCCCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
3UTR CCA 72 bp AGGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTaGGCAGACCCTGGAGTGGCCTTACAGACCAGCCAC +
Preference number: 3 (lower is better)
Translates to: RFRPPFASHRRG*ADPGVALQTSH
Trigger: GTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR CCA 72 bp GGGCTCAGGAAGACAGCGGGGTCTGACACGGGGAGCTaGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTG +
Preference number: 3 (lower is better)
Translates to: GLRKTAGSDTGS*VSSATGAGANL
Trigger: CAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCCGTGTCAGACCCCGCTGTCTTCCTGAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
3UTR CCA 72 bp GCGCTGTGGCTCTCTTGCAGGGCGATGTTGCACAGGTaGTCGGAGAATCGGCACAGGCGCTCGGTGACGCTG +
Preference number: 3 (lower is better)
Translates to: ALWLSCRAMLHR*SENRHRRSVTL
Trigger: CAGCGTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR CAA 90 bp GCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACACCAAGGCTGCTGCTGTaGCTCCTCCAAAGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: ASLCQPPPGVGRPWSGLTPRLLL*LLQRRL
Trigger: CAACCTTCTTTGGAGGAGCAACAGCAGCAGCCTTGG...TGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR TCA 72 bp CAGGTGAGGGGGTTTAGGGCCCCTCTAGGGAGCGCCTaGGGCCATACATTCAAGAGTGTCCCTGGTGAGGCC +
Preference number: 3 (lower is better)
Translates to: QVRGFRAPLGSA*GHTFKSVPGEA
Trigger: GGCCTCACCAGGGACACTCTTGAATGTATGGCCTCAGGCGCTCCCTAGAGGGGCCCTAAACCCCCTCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
3UTR CCA 72 bp TCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTaGAGTGGCCTTACAGACCAGCCACAGGTATTTCTT +
Preference number: 3 (lower is better)
Translates to: SLCQPPPGVGRP*SGLTDQPQVFL
Trigger: AAGAAATACCTGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR GCA 72 bp GCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTaGTGTTGCTCCTCCAAAGAAGGTTGGCTTCAAGGC +
Preference number: 3 (lower is better)
Translates to: AALGVGRVGQGC*CCSSKEGWLQG
Trigger: GCCTTGAAGCCAACCTTCTTTGGAGGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR-3UTR CAA 90 bp TCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGCCGCTTCCTGTCCTTCTaGGGCTCCTGTCTGCTTCTA +
Preference number: 3 (lower is better)
Translates to: SENRHRRSVTLASHRFSSRFLSF*GSCLLL
Trigger: TAGAAGCAGACAGGAGCCCAAGAAGGACAGGAAGCG...GCTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR GCA 72 bp TTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTaGTCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTC +
Preference number: 3 (lower is better)
Translates to: LGVGRVGQGCCC*SSKEGWLQGRV
Trigger: GACACGGCCTTGAAGCCAACCTTCTTTGGAGGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR GCA 72 bp TTGAGGCCCAGGGGTTTGAGGGAGGTGAGGTGCAGCTaGCAGTTGGAGTCATCAAACTGGATGCAGGAGGGG +
Preference number: 3 (lower is better)
Translates to: LRPRGLREVRCS*QLESSNWMQEG
Trigger: CCCCTCCTGCATCCAGTTTGATGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAAACCCCTGGGCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR CCA 72 bp GAGGTGAGGTGCAGCTGCCAGTTGGAGTCATCAAACTaGATGCAGGAGGGGTTCTGCTGGTCCTGGGACAGG +
Preference number: 3 (lower is better)
Translates to: EVRCSCQLESSN*MQEGFCWSWDR
Trigger: CCTGTCCCAGGACCAGCAGAACCCCTCCTGCATCCAGTTTGATGACTCCAACTGGCAGCTGCACCTCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR CAA 90 bp GTCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGAGGTGCAGCTGCCAGTaGGAGTCATCAAACTGGATG +
Preference number: 3 (lower is better)
Translates to: VGESAQALGDAGITQVQQRCSCQ*ESSNWM
Trigger: CATCCAGTTTGATGACTCCAACTGGCAGCTGCACCT...CTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR-3UTR CAA 90 bp GCAGCGCAGCATTTCCTGAGAGGAGACAGCCTCCGTATAGCTGCTGAGAGTATCCCTCTCCACAGGCAGTaGCCAGAACCCAGAGGACTG +
Preference number: 3 (lower is better)
Translates to: AAQHFLRGDSLRIAAESIPLHRQ*PEPRGL
Trigger: CAGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGG...GATACTCTCAGCAGCTATACGGAGGCTGTCTCCTCTCAGGAAATGCTGCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580441.5
3UTR GCA 72 bp CAGCATCTCCAGGTGGTAGTCACACACAAAGTCCTCTaGTTCGTAGGGGTCGCTCTCCATCCCAGGCTGGGT +
Preference number: 3 (lower is better)
Translates to: QHLQVVVTHKVL*FVGVALHPRLG
Trigger: ACCCAGCCTGGGATGGAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGTGACTACCACCTGGAGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR TCA 72 bp GTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATaGTACAAACTCCCCTGTTCAGAAATGGGTCTGGCT +
Preference number: 3 (lower is better)
Translates to: VPRVQEQTWKHS*YKLPCSEMGLA
Trigger: AGCCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp CTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGAGGGCAGGGAGAGCCTaGCCCCATTGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LCQPPPGVGRPWSGLTDQRAGRA*PHWPRP
Trigger: GGGCCTGGGCCAATGGGGTCAGGCTCTCCCTGCCCT...CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp CCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGCGGGACAGGCCCAGGGCTaGGGGAGGCTCGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PRLTGSQLEPGTGRGSRAGQAQG*GRLAQV
Trigger: CACCTGGGCGAGCCTCCCTCAGCCCTGGGCCTGTCC...CGCCCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp CGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGAGGCCGCCGCTTGGTaGCACAGGAGAGCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: RSGGPAPSSGSGGRLPHREAAAW*HRRAAP
Trigger: TGGGGCGGCTCTCCTGTGTCACCAAGCGGCGGCCTC...TCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGGAGGCCGCCGCTTGGTaGCACAGGAGAGCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWEAAAW*HRRAAP
Trigger: TGGGGCGGCTCTCCTGTGTCACCAAGCGGCGGCCTC...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGCTCCAGGGCGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCGCCTGAGCCAGACCTaGGGGACCCACCCGCGTAGA +
Preference number: 4 (lower is better)
Translates to: GSRAKRGPCSIFRFRRETRLSQT*GTHPRR
Trigger: TCTACGCGGGTGGGTCCCTCAGGTCTGGCTCAGGCG...AGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCGCCCTGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp AAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGAGGCCCCAGGGCACATaGACGGGCAGCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KRGPCSIFRFRRETPPQRRPQGT*TGSTAL
Trigger: CAGCGCCGTGCTGCCCGTCCATGTGCCCTGGGGCCT...CCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp CTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGGCTCCTTCAGGACGCTaGGGGCCTTCCGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: LCQPPPGVGRPWSGLTDQAPSGR*GPSAWT
Trigger: TGTCCACGCGGAAGGCCCTCAGCGTCCTGAAGGAGC...CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGGCCGTCTGGACCACCTaGCCCAGCAGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWAVWTT*PSSTTG
Trigger: GCCTGTGGTGCTGCTGGGTCAGGTGGTCCAGACGGC...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGCCTAGGGGTCTCGCCTaGGCCAGACCTGAGGGACCC +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWPRGLA*ARPEGP
Trigger: GGGTCCCTCAGGTCTGGCTCAGGCGAGACCCCTAGG...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp GCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACATGGAGGAGGGTGTACTaGCAGGAAGTGACCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ASLCQPPPGVGRPWSGLTWRRVY*QEVTPG
Trigger: CCCGGGGGTCACTTCCTGGCAGTACACCCTCCTCCA...TGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAAAAAGCCGGTGCTGCTaGGGGCTCTGTGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: ASLCQPPPGVGRPWSGLTKSRCC*GLCGPL
Trigger: GAGAGGGCCACAGAGCCCCCAGCAGCACCGGCTTTT...TGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGAACAGGGCAGGCTGTTaGGCTGCCCTGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLGLPLPATAGGGQTLEWNRAGC*AALTAA
Trigger: TGCAGCTGTCAGGGCAGCTCAACAGCCTGCCCTGTT...CCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp GCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACATGGCCGCTCAGGGCCTaGATGCAGTCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASLCQPPPGVGRPWSGLTWPLRA*MQSSFS
Trigger: GGAGAAGGAAGACTGCATGCAGGCCCTGAGCGGCCA...TGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp GCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAAGCTGCCCTGACAGCTaGAGGGGAGAAAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: ASLCQPPPGVGRPWSGLTSCPDS*RGERPS
Trigger: GGATGGCCTTTCTCCCCTGCAGCTGTCAGGGCAGCT...TGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGAGAGCAGGGGGAGGATaGGCAGGACGCCATTCACCT +
Preference number: 4 (lower is better)
Translates to: GLGLPLPATAGGGQTLEWRAGGG*AGRHSP
Trigger: AGGTGAATGGCGTCCTGCCCATCCTCCCCCTGCTCT...CCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp TGCCCTCCACGGCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGGCAGCACGGCGCTGTaGCTCTCTTGCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: CPPRQPWELDASAKAAAVGSTAL*LSCRAM
Trigger: CATCGCCCTGCAAGAGAGCCACAGCGCCGTGCTGCC...AACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGAGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp CGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGCAGCCTTGGGAGTTaGACGCGTCGGCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSGGPAPSSGSGGRLPHRGSLGS*TRRPRL
Trigger: CAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCC...TCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGGAGGGACATTGTCCAGGGCAGTaGCTGGTCGGGACAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GPCSIFRFRRETPPQREGHCPGQ*LVGTGP
Trigger: TGGCCCTGTCCCGACCAGTCACTGCCCTGGACAATG...TCCCTCCCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp CGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGAAGACAGCGGGGTCTaGCACGGGGAGCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: RSGGPAPSSGSGGRLPHREDSGV*HGELGF
Trigger: GAAACCCAGCTCCCCGTGTCAGACCCCGCTGTCTTC...TCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp CGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGACAAGAGTGTCCCTGGTaGGGCCCAGGGAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RSGGPAPSSGSGGRLPHRQECPW*GPGKSQ
Trigger: CTGGCTCTTCCCTGGGCCTCACCAGGGACACTCTTG...TCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp GGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGGAGGGAACACGGAAAAGCCGGTaGTGCTGGGGGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GPCSIFRFRRETPPQREGTRKSR*CWGLCG
Trigger: GCCACAGAGCCCCCAGCAGCACCGGCTTTTCCGTGT...TCCCTCCCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGTGGAGGAGGGTGTACTaGCAGGAAGTGACCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWWRRVY*QEVTPG
Trigger: CCCGGGGGTCACTTCCTGGCAGTACACCCTCCTCCA...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp AAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGGTCCAGGGCAGTGACTaGTCGGGACAGGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: KRGPCSIFRFRRETPPQRVQGSD*SGQGHV
Trigger: GACATGGCCCTGTCCCGACCAGTCACTGCCCTGGAC...CCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GGCTCCAGGGCGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTTCATGGGGCTCGGGATaGCAGAAGGAGCGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GSRAKRGPCSIFRFRRETSWGSG*QKERVD
Trigger: ATCCACCCGCTCCTTCTGCCATCCCGAGCCCCATGA...AGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCGCCCTGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGCAGGAGGGGTTCTGCTaGTCCTGGGACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWQEGFC*SWDRLS
Trigger: GCTGAGCCTGTCCCAGGACCAGCAGAACCCCTCCTG...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGATGTCCAGCCGGGCCTaGTACTGGGAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: LCQPPPGVGRPWSGLTDQMSSRA*YWEDTM
Trigger: CATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACAT...CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGGCAGCTTGGCCCGGTTaGAGTCCTCCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWAAWPG*SPPGSW
Trigger: CCAGCTTCCTGGAGGACTCCAACCGGGCCAAGCTGC...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGGCCACAGGATGTCGGTaGTACTCAGGAGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LCQPPPGVGRPWSGLTDQATGCR*YSGVAA
Trigger: TGCCGCCACTCCTGAGTACCACCGACATCCTGTGGC...CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAAGGCCAAAGTGGACGTaGCTGTCCCTGTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ASLCQPPPGVGRPWSGLTRPKWT*LSLCVH
Trigger: GTGGACACACAGGGACAGCCACGTCCACTTTGGCCT...TGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GAAGGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGCACGAGCAGAGGCACTaGGGGGCAAGGGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: EGLGLPLPATAGGGQTLEHEQRH*GARDLQ
Trigger: TTGGAGATCCCTTGCCCCCCAGTGCCTCTGCTCGTG...CTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GGCTCCAGGGCGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTGAATGTGGTCACCCCTaGAAGGAAGGCTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GSRAKRGPCSIFRFRRETECGHP*KEGSSP
Trigger: TGGGGAGGAGCCTTCCTTTCAGGGGTGACCACATTC...AGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCGCCCTGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGCACGGCCAGTAGCATaGGTGAGGCCCCCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWARPVA*VRPPAS
Trigger: ACTGGCCGGGGGCCTCACTCATGCTACTGGCCGTGC...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGGCAGCTCGCACATGGTaGAGATGCTGCTTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWAARTW*RCCFGR
Trigger: CCGGCCAAAGCAGCATCTTCACCATGTGCGAGCTGC...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp TCCACGGCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCTCCAGGACACCATGCCCATaGAGATCTGGCCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: STAALGVGRVGQGCCCCSRTPCP*RSGRSG
Trigger: CCCTGAGCGGCCAGATCTTCATGGGCATGGTGTCCT...GGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp GGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGATGTCCTTCCAGCACTaGCTCCAGCTGCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLGLPLPATAGGGQTLEWMSFQH*LQLLLQ
Trigger: CTGAAGGAGCAGCTGGAGGCAGTGCTGGAAGGACAT...CCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp GAAGGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGCCATGGGACAGCATCTaGTCTGTGCTGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EGLGLPLPATAGGGQTLEPWDSI*SVLVVV
Trigger: CACCACCACCAGCACAGAGCAGATGCTGTCCCATGG...CTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp GGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGAGACCACATCAGCGGTaGCATGGGACAGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GLGLPLPATAGGGQTLEWRPHQR*HGTASA
Trigger: AGCAGATGCTGTCCCATGGCACCGCTGATGTGGTCT...CCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp TCCCCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGAGGCCCCCGGCCAGTaGAAGCAGGAGCAGCGGTTA +
Preference number: 4 (lower is better)
Translates to: SPRLTGSQLEPGTGRGSREAPGQ*KQEQRL
Trigger: TAACCGCTGCTCCTGCTTCCACTGGCCGGGGGCCTC...CCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGTCATGGGGCTCGGGATaGCAGAAGGAGCGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWSWGSG*QKERVD
Trigger: ATCCACCCGCTCCTTCTGCCATCCCGAGCCCCATGA...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGGTTCTGCTGGTCCTaGGACAGGCTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: RSGGPAPSSGSGGRLPHRGFCWS*DRLSIS
Trigger: GGAGATGCTGAGCCTGTCCCAGGACCAGCAGAACCC...TCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGTCATTGTCTCGGCACTaGGGAGGCGGTACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWSLSRH*GGGTAP
Trigger: TGGCGCTGTACCGCCTCCCCAGTGCCGAGACAATGA...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGCGGCCCACCAGAGGTTaGTCAAGGGGCTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWRPTRG*SRGSFS
Trigger: GGAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCG...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGCTCCAGGGCGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTGCTCCACCTTCCCGCTaGAGAACAGTACAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GSRAKRGPCSIFRFRRETAPPSR*RTVQSL
Trigger: CAGAGACTGTACTGTTCTTCAGCGGGAAGGTGGAGC...AGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCGCCCTGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGCACTTGCCATTGAGCTaGGAGGACAGGGCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWHLPLS*EDRAQF
Trigger: GAACTGCGCCCTGTCCTCTCAGCTCAATGGCAAGTG...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GAGGGACCCACCCGCGTAGATGGAGGAAGGTTTAGGCCTCCCTTTGCCAGCCACGGCCCTCCTCCTCCATaGGGAGGAGCCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: EGPTRVDGGRFRPPFASHGPPPP*GGALLH
Trigger: ATGCAGAAGGGCTCCTCCTCATGGAGGAGGAGGGCC...GTGGCTGGCAAAGGGAGGCCTAAACCTTCCTCCATCTACGCGGGTGGGTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GAAGGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGCCAGCAGAGAGATGCTaGGCAGAGGGTAGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: EGLGLPLPATAGGGQTLEPAERC*AEGSKS
Trigger: GCTTTTGCTACCCTCTGCTCAGCATCTCTCTGCTGG...CTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCGGAGGAGCAGTTGGTaGGGTTGCGGTCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHRRSSW*GCGPGS
Trigger: GCTCCCGGGACCGCAACCTCACCAACTGCTCCTCCG...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGGCGGCCGTGAGCTTCTaGGCCGACAGCAGTCCATTG +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGAAVSF*ADSSPL
Trigger: CAATGGACTGCTGTCGGCTCAGAAGCTCACGGCCGC...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGCCGTCTGGACCACCTaGCCCAGCAGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHAVWTT*PSSTTG
Trigger: GCCTGTGGTGCTGCTGGGTCAGGTGGTCCAGACGGC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp CTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCCTCTAGGGAGCGCCTaGGGCCATACATTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LCQPPPGVGRPWSGLTDQPLGSA*GHTFKS
Trigger: ACTCTTGAATGTATGGCCTCAGGCGCTCCCTAGAGG...CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGGACAGGCAGCCAGCTTaGGCCAGGCACAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGDRQPA*ARHRKR
Trigger: CCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTC...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGGGCTCCAGGACGATGTaGTCGTCATCCTTGATCCCC +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWGSRTM*SSSLIP
Trigger: GGGGATCAAGGATGACGAGCACATCGTCCTGGAGCC...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp CCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCTCCTCCAAAGAAGCGGAAAAGCCGGTGCTaGTGGGGGCTCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PWELDASAKAAAVAPPKKRKSRC*WGLCGP
Trigger: AGGGCCACAGAGCCCCCAGCAGCACCGGCTTTTCCG...CTTCTTTGGAGGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCCGGAAAAGCCGGTGCTaGTGGGGGCTCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGRKSRC*WGLCGP
Trigger: AGGGCCACAGAGCCCCCAGCAGCACCGGCTTTTCCG...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp GAAGGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGGGAAGTGGCCCCAAATaGAGCGCAGCATTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: EGLGLPLPATAGGGQTLEGSGPK*SAAFPE
Trigger: CTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCC...CTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp TGCCCTCCACGGCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTCAGTCGCCACGCTCCTaGTCATTGGAAAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: CPPRQPWELDASAKAAAVQSPRS*SLERCR
Trigger: CCTGCACCTTTCCAATGAGCAGGAGCGTGGCGACTG...AACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGAGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp CTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGACTGGGCTGTGTGTTTaGCTCTGTGACATGGGGACC +
Preference number: 4 (lower is better)
Translates to: LCQPPPGVGRPWSGLTDQTGLCV*LCDMGT
Trigger: GGTCCCCATGTCACAGAGGCAAACACACAGCCCAGT...CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACAGCAGGAGCCCCGACTaGCCACCTGAGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHSRSPD*PPEGRE
Trigger: CTCCCTGCCCTCAGGTGGGCAGTCGGGGCTCCTGCT...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGGTCCAGGGCAGTGACTaGTCGGGACAGGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGVQGSD*SGQGHV
Trigger: GACATGGCCCTGTCCCGACCAGTCACTGCCCTGGAC...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGGAGGCCTTGCTCATCTaGGCCAGGACACGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGEALLI*ARTRAS
Trigger: AGAGGCCCGTGTCCTGGCCCAGATGAGCAAGGCCTC...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GAGGAGGGTGTACTGCCAGGAAGTGACCCCCGGGGCACTGAAGATGAAGCGCAGGAGGCCTTGCTCATCTaGGCCAGGACACGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: EEGVLPGSDPRGTEDEAQEALLI*ARTRAS
Trigger: AGAGGCCCGTGTCCTGGCCCAGATGAGCAAGGCCTC...CTGCGCTTCATCTTCAGTGCCCCGGGGGTCACTTCCTGGCAGTACACCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGCAGGCTGGGTCTTGCTaGGCTCTTCTTCACCACCCT +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWQAGSC*ALLHHP
Trigger: AGGGTGGTGAAGAAGAGCCCAGCAAGACCCAGCCTG...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGCTCTCCATCCCAGGCTaGGTCTTGCTGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWLSIPG*VLLGSS
Trigger: AGAAGAGCCCAGCAAGACCCAGCCTGGGATGGAGAG...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CAGGGCGATGTTGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGGTTCTGCTGGTCCTaGGACAGGCTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: QGDVAQVVGESAQALGDAGFCWS*DRLSIS
Trigger: GGAGATGCTGAGCCTGTCCCAGGACCAGCAGAACCC...AGCGTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CCA 90 bp TGCCCTCCACGGCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCGATGTTGCACAGGTaGTCGGAGAATCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: CPPRQPWELDASAKAAAVAMLHR*SENRHR
Trigger: CCTGTGCCGATTCTCCGACCACCTGTGCAACATCGC...AACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGAGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGCAGCACGGCGCTGTaGCTCTCTTGCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWGSTAL*LSCRAM
Trigger: CATCGCCCTGCAAGAGAGCCACAGCGCCGTGCTGCC...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GAGGGACCCACCCGCGTAGATGGAGGAAGGTTTAGGCCTCCCTTTGCCAGCCACAGGCCATCCGAGGCCTaGGCCATGCTGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EGPTRVDGGRFRPPFASHRPSEA*AMLMLV
Trigger: CACCAGCATCAGCATGGCCCAGGCCTCGGATGGCCT...GTGGCTGGCAAAGGGAGGCCTAAACCTTCCTCCATCTACGCGGGTGGGTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp CTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCTGATGGTCTCCTCCTaGCGAAAGGTCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: LCQPPPGVGRPWSGLTDQLMVSS*RKVREQ
Trigger: CTGTTCCCTGACCTTTCGCCAGGAGGAGACCATCAG...CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGTCCTCCAGGCCAAAGTaGACGTGGCTGTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWSSRPK*TWLSLC
Trigger: ACACAGGGACAGCCACGTCCACTTTGGCCTGGAGGA...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGCTTGGATTTGGTCAATaGTCCCTCGCAGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: KRGPCSIFRFRRETPPQRLGFGQ*SLAASA
Trigger: AGCGGAGGCTGCGAGGGATCATTGACCAAATCCAAG...CCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGCTTGGATTTGGTCAATaGTCCCTCGCAGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWLGFGQ*SLAASA
Trigger: AGCGGAGGCTGCGAGGGATCATTGACCAAATCCAAG...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp AGCTGGAGGAGGGTGTACTGCCAGGAAGTGACCCCCGGGGCACTGAAGATGAAGCATTGTCCAGGGCAGTaGCTGGTCGGGACAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SWRRVYCQEVTPGALKMKHCPGQ*LVGTGP
Trigger: TGGCCCTGTCCCGACCAGTCACTGCCCTGGACAATG...CTTCATCTTCAGTGCCCCGGGGGTCACTTCCTGGCAGTACACCCTCCTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR TCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGCCTCGGTGTCCCTGCTaGAGCTCACGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWPRCPC*SSRWSQ
Trigger: CTGGCTCCAACGTGAGCTTCAGCAGGGACACCGAGG...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGGCACAGGCGCTCGGTaGCGCTGGCATCACACAGGT +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHGTGAR*RWHHTG
Trigger: ACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGCGATGCACTTGCCATTaGGCTGAGAGGACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGRCTCH*AERTGR
Trigger: GCGCCCTGTCCTCTCAGCTCAATGGCAAGTGCATCG...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp CTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGTCATCTCGGGACACCTaGTTCAGGTCATCATGCAGG +
Preference number: 4 (lower is better)
Translates to: LCQPPPGVGRPWSGLTDQSSRDT*FRSSCR
Trigger: CCTGCATGATGACCTGAATCAGGTGTCCCGAGATGA...CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACCAATCAGGGCGGCCGTaGGCTTCTGAGCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHQSGRP*ASEPTA
Trigger: TGCTGTCGGCTCAGAAGCTCACGGCCGCCCTGATTG...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp CCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGCGGGCTCCAGGACGATGTaGTCGTCATCCTTGATCCCC +
Preference number: 4 (lower is better)
Translates to: PRLTGSQLEPGTGRGSRAGSRTM*SSSLIP
Trigger: GGGGATCAAGGATGACGAGCACATCGTCCTGGAGCC...CGCCCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACACGGAAAAGCCGGTaGTGCTGGGGGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGTRKSR*CWGLCG
Trigger: GCCACAGAGCCCCCAGCAGCACCGGCTTTTCCGTGT...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp TGGGCCAGGACACGGGCCTCTCCACAGGCAGTTGCCAGAACCCAGAGGACTGGACTCTCCACAGGCAGTTaGCAGAACCCAGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: WARTRASPQAVARTQRTGLSTGS*QNPEDW
Trigger: CCAGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAG...TCCAGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGGCCCGTGTCCTGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR GCA 90 bp TCCCCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGCGCTGTGGCTCTCTTaGAGGGCGATGTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SPRLTGSQLEPGTGRGSRALWLS*RAMLHR
Trigger: CCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGC...CCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGGCGCTGTGGCTCTCTTaGAGGGCGATGTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGALWLS*RAMLHR
Trigger: CCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGC...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp TTGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACGCGCTGTGGCTCTCTTaGAGGGCGATGTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LQGDVAQVVGESAQALGDALWLS*RAMLHR
Trigger: CCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGC...GTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR GCA 90 bp CGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCCACAGGTATTTCTTACGTCAGAGCTCCAGCTaGTGCGGCGGGCGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RGWADPGVALQTSHRYFLRQSSS*CGGRSA
Trigger: AGCAGAACGCCCGCCGCAGCAGCTGGAGCTCTGACG...TAAGAAATACCTGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGGGAAGCACTTACGGATaGCATAGGTGGCATGCCGAG +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWGSTYG*HRWHAE
Trigger: CTCGGCATGCCACCTATGGCATCCGTAAGTGCTTCC...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp CCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCTCCTCCAAAGAAGGCGAAGCGGGGGCCCTaGTCCATCTTCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PWELDASAKAAAVAPPKKAKRGP*SIFRFR
Trigger: CCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCGC...CTTCTTTGGAGGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGTCTCCTTCAGGTCCATaGGCCAAGAGTACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWSPSGP*AKSTAG
Trigger: GCCTGCAGTACTCTTGGCCCATGGACCTGAAGGAGA...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000579208.5
CDS-3UTR CCA 90 bp TCCCCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGGCTGTGCAGCAGGCTaGAACTGTGGCTCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: SPRLTGSQLEPGTGRGSRGCAAG*NCGSAL
Trigger: CAACGCTGAGCCACAGTTCCAGCCTGCTGCACAGCC...CCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGAGGGCGTCTCGTTCATaGGGCTCGGGATGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGRASRS*GSGWQK
Trigger: CTTCTGCCATCCCGAGCCCCATGAACGAGACGCCCT...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGCGCAGGCTGGGTCTTGCTaGGCTCTTCTTCACCACCCT +
Preference number: 4 (lower is better)
Translates to: PRLTGSQLEPGTGRGSRAQAGSC*ALLHHP
Trigger: AGGGTGGTGAAGAAGAGCCCAGCAAGACCCAGCCTG...CGCCCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp CTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCGGTACAGCGCCAGATaGTTCTCCTGCTTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LCQPPPGVGRPWSGLTDQRYSAR*FSCLKS
Trigger: GCTTTTCAAGCAGGAGAACCATCTGGCGCTGTACCG...CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGTCATTGTCTCGGCACTaGGGAGGCGGTACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGSLSRH*GGGTAP
Trigger: TGGCGCTGTACCGCCTCCCCAGTGCCGAGACAATGA...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGCGATGCCCATGAAGATCTaGCCGCTCAGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: PRLTGSQLEPGTGRGSRAMPMKI*PLRACM
Trigger: CATGCAGGCCCTGAGCGGCCAGATCTTCATGGGCAT...CGCCCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGAGCTGTTCCGCAGGTTaGCAGAGCTGCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGSCSAG*QSCPGS
Trigger: GCTGCCTGGGCAGCTCTGCCAACCTGCGGAACAGCT...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCCCAGGAGCAACGGGATaGGTACAGGGGATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGPGATG*VQGIQG
Trigger: GCCCTGGATCCCCTGTACCCATCCCGTTGCTCCTGG...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGCTGATGGTCTCCTCCTaGCGAAAGGTCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWLMVSS*RKVREQ
Trigger: CTGTTCCCTGACCTTTCGCCAGGAGGAGACCATCAG...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGGAGGGAACCACAAGAGTCAGCTaGCACTGCAGCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GPCSIFRFRRETPPQREGTTRVS*HCSRKR
Trigger: CCTCTTCCTGCTGCAGTGCCAGCTGACTCTTGTGGT...TCCCTCCCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGGCTGAGAGTATCCTCTaGGAACTTAGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWAESIL*ELSQQG
Trigger: TCCCTGCTGGCTAAGTTCTCAGAGGATACTCTCAGC...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCCTCGGTGTCCCTGCTaGAGCTCACGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHPRCPC*SSRWSQ
Trigger: CTGGCTCCAACGTGAGCTTCAGCAGGGACACCGAGG...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp CCCAGGGGTTTGAGGGAGGTGAGGTGCAGCTGCCAGTTGGAGTCATCAAACTGGCCTCGGTGTCCCTGCTaGAGCTCACGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PRGLREVRCSCQLESSNWPRCPC*SSRWSQ
Trigger: CTGGCTCCAACGTGAGCTTCAGCAGGGACACCGAGG...CCAGTTTGATGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAAACCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR TCA 90 bp GGTGGTAGTCACACACAAAGTCCTCTGCTTCGTAGGGGTCGCTCTCCATCCCAGGGCACAGGCGCTCGGTaGCGCTGGCATCACACAGGT +
Preference number: 4 (lower is better)
Translates to: GGSHTQSPLLRRGRSPSQGTGAR*RWHHTG
Trigger: ACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCC...CTGGGATGGAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGTGACTACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR TCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGCTGTTGAGCTGCCCTaGCAGCTGCAGGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGAVELP*QLQGRK
Trigger: CTTTCTCCCCTGCAGCTGTCAGGGCAGCTCAACAGC...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGAAGACAGCGGGGTCTaGCACGGGGAGCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHEDSGV*HGELGF
Trigger: GAAACCCAGCTCCCCGTGTCAGACCCCGCTGTCTTC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGACAGCTGAGAGTGTGTaGGCAAGAAGCCGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGTAESV*ARSRVL
Trigger: CAGCACCCGGCTTCTTGCTCACACACTCTCAGCTGT...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375248.9
CDS-3UTR TCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACGCATGGGCCAGAGTCTaGGCCACAAGCAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHAWARV*ATSSQL
Trigger: CAGCTGACTGCTTGTGGCTCAGACTCTGGCCCATGC...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375248.9
CDS-3UTR GCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACAGCACTGCCTCCAGCTaGTCCTTCAGGACGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHSTASS*SFRTLR
Trigger: CCTCAGCGTCCTGAAGGAGCAGCTGGAGGCAGTGCT...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp CGAGCACCCTCAGGAAGTGGCCCCAAATGCAGCGCAGCATTTCCTGAGAGGAGACGCTTCAGCCGGTCTTaGCGCCCGATGAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: RAPSGSGPKCSAAFPERRRFSRS*RPMSTR
Trigger: CCTTGTGCTCATCGGGCGGCAAGACCGGCTGAAGCG...TCTCCTCTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCCTGAGGGTGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR GCA 90 bp CCCTCAGGAAGTGGCCCCAAATGCAGCGCAGCATTTCCTGAGAGGAGACAGCCTTGGAGGAGGGTGTACTaGCAGGAAGTGACCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PSGSGPKCSAAFPERRQPWRRVY*QEVTPG
Trigger: CCCGGGGGTCACTTCCTGGCAGTACACCCTCCTCCA...AGGCTGTCTCCTCTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCCTGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR GCA 90 bp CCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGCGCAGATGGGTGTTTGCTaGGGCCATGCGCTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: PRLTGSQLEPGTGRGSRAQMGVC*GHALCG
Trigger: ACCACAAAGCGCATGGCCGCAGCAAACACCCATCTG...CGCCCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGTCCCAGGCTGGGTCTTaGTGGGCTCTTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGSQAGS*WALLHH
Trigger: GTGGTGAAGAAGAGCCCAGCAAGACCCAGCCTGGGA...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGACACACAAAGTCCTCTaGTTCGTAGGGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWTHKVL*FVGVAL
Trigger: GAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGT...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp CGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGACGTCCCAGAAGTCTGTaGAGGCCTCTAAGACCACAT +
Preference number: 4 (lower is better)
Translates to: RSGGPAPSSGSGGRLPHRRPRSL*RPLRPH
Trigger: ATGTGGTCTTAGAGGCCTGCACAGACTTCTGGGACG...TCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCTGCGGCGGGCGTTCTaGTTGATGGGGATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHLRRAF*LMGMVL
Trigger: CAGCACCATCCCCATCAAGCAGAACGCCCGCCGCAG...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGCAGGTTGGCAGAGCTaGCCAGGCAGCAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHAGWQS*PGSRSP
Trigger: AGGTGACCTGCTGCCTGGGCAGCTCTGCCAACCTGC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGCTGTGTGTCCACAGCTaGAGGTCCACAGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGLCVHS*RSTAVW
Trigger: CCAGACGGCTGTGGACCTGCAGCTGTGGACACACAG...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGGAGCTGGGTTTCCAGTaGCACGGGTGCAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGELGFQ*HGCRSK
Trigger: TTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTC...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGAGGCCCCCGGCCAGTaGAAGCAGGAGCAGCGGTTA +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHEAPGQ*KQEQRL
Trigger: TAACCGCTGCTCCTGCTTCCACTGGCCGGGGGCCTC...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGGGCGCAAAAGGCATGTaGAGGTCTGGATACATGGCA +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWGAKGM*RSGYMA
Trigger: TGCCATGTATCCAGACCTCCACATGCCTTTTGCGCC...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CGAGCACCCTCAGGAAGTGGCCCCAAATGCAGCGCAGCATTTCCTGAGAGGAGAGTCCAGGGCAGTGACTaGTCGGGACAGGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: RAPSGSGPKCSAAFPERRVQGSD*SGQGHV
Trigger: GACATGGCCCTGTCCCGACCAGTCACTGCCCTGGAC...TCTCCTCTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCCTGAGGGTGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR CCA 90 bp GAGGAGGGTGTACTGCCAGGAAGTGACCCCCGGGGCACTGAAGATGAAGCGCAGCCATTCACCTGGAGCTaGAGGAGGGTGTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: EEGVLPGSDPRGTEDEAQPFTWS*RRVYCQ
Trigger: CTGGCAGTACACCCTCCTCCAGCTCCAGGTGAATGG...CTGCGCTTCATCTTCAGTGCCCCGGGGGTCACTTCCTGGCAGTACACCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR CCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCGGCTGTGCAGCAGGCTaGAACTGTGGCTCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGGCAAG*NCGSAL
Trigger: CAACGCTGAGCCACAGTTCCAGCCTGCTGCACAGCC...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGGAGGGAGTACAGTCTCTGGGCTaGGATTTGGCCATGACAGGA +
Preference number: 4 (lower is better)
Translates to: GPCSIFRFRRETPPQREGVQSLG*DLAMTG
Trigger: TCCTGTCATGGCCAAATCCCAGCCCAGAGACTGTAC...TCCCTCCCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGGTACAGTCTCTGGGCTaGGATTTGGCCATGACAGGA +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWVQSLG*DLAMTG
Trigger: TCCTGTCATGGCCAAATCCCAGCCCAGAGACTGTAC...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CACCCGCTCCCTCCTGAAATCCGCTTCCTGTCCTTCTTGGGCTCCTGTCTGCTTCAGGAGGGGTTCTGCTaGTCCTGGGACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HPLPPEIRFLSFLGSCLLQEGFC*SWDRLS
Trigger: GCTGAGCCTGTCCCAGGACCAGCAGAACCCCTCCTG...AAGCAGACAGGAGCCCAAGAAGGACAGGAAGCGGATTTCAGGAGGGAGCGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CCA 90 bp AGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGCACATTGAGGCCCAGGGCGATGTTGCACAGGTaGTCGGAGAATCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: RRSVTLASHRFSSTLRPRAMLHR*SENRHR
Trigger: CCTGTGCCGATTCTCCGACCACCTGTGCAACATCGC...CCTGGGCCTCAATGTGCTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGACAGGGCGCAGTTCATaGGCTTGTAGGCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGTGRSS*ACRRRQ
Trigger: CTGCCTTCGCCTACAAGCCCATGAACTGCGCCCTGT...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp TCCACGGCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCTCCCTCACACATGGTCTCTaGGGTGCAGTCGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: STAALGVGRVGQGCCCCSLTHGL*GAVGEK
Trigger: CTTTTCACCGACTGCACCCCAGAGACCATGTGTGAG...GGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACAGGCCATCCGAGGCCTaGGCCATGCTGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHRPSEA*AMLMLV
Trigger: CACCAGCATCAGCATGGCCCAGGCCTCGGATGGCCT...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGCCGACAGCAGTCCATTaGCAAAGTCCTCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWPTAVH*QSPQTR
Trigger: CCTGGTTTGAGGACTTTGCCAATGGACTGCTGTCGG...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGCGAGCCACCACAGCCAGTaGCTCAGAAGGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: PRLTGSQLEPGTGRGSRASHHSQ*LRRESS
Trigger: TGAACTCTCCCTTCTGAGCCACTGGCTGTGGTGGCT...CGCCCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp CCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCTCCTCCAAAGAAGTCTGACACGGGGAGCTaGGTTTCCAGTGCCACGGGT +
Preference number: 4 (lower is better)
Translates to: PWELDASAKAAAVAPPKKSDTGS*VSSATG
Trigger: ACCCGTGGCACTGGAAACCCAGCTCCCCGTGTCAGA...CTTCTTTGGAGGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGTCTGACACGGGGAGCTaGGTTTCCAGTGCCACGGGT +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGSDTGS*VSSATG
Trigger: ACCCGTGGCACTGGAAACCCAGCTCCCCGTGTCAGA...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGCACGAGCAGAGGCACTaGGGGGCAAGGGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWHEQRH*GARDLQ
Trigger: TTGGAGATCCCTTGCCCCCCAGTGCCTCTGCTCGTG...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGGGCAGACCCTGGAGTaGCCTTACAGACCAGCCACA +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGGQTLE*PYRPAT
Trigger: TGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCC...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp TCCCCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGTTTGCCTCTGTGACATaGGGACCCCTGACCCTAGGG +
Preference number: 4 (lower is better)
Translates to: SPRLTGSQLEPGTGRGSRFASVT*GPLTLG
Trigger: CCCTAGGGTCAGGGGTCCCCATGTCACAGAGGCAAA...CCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp AAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGACCATTCCACGTGACTaGGCTGTGTGTTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KRGPCSIFRFRRETPPQRTIPRD*AVCLPL
Trigger: CAGAGGCAAACACACAGCCCAGTCACGTGGAATGGT...CCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp CACCCGCTCCCTCCTGAAATCCGCTTCCTGTCCTTCTTGGGCTCCTGTCTGCTTCTCTCCATCCCAGGCTaGGTCCTCTTCCACCCGCTC +
Preference number: 4 (lower is better)
Translates to: HPLPPEIRFLSFLGSCLLLSIPG*VLFHPL
Trigger: GAGCGGGTGGAAGAGGACCCAGCCTGGGATGGAGAG...AAGCAGACAGGAGCCCAAGAAGGACAGGAAGCGGATTTCAGGAGGGAGCGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CCA 90 bp TCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGCCTGGCAGGAGCTTGCTaGGCTCTTCTTCACCACCCT +
Preference number: 4 (lower is better)
Translates to: SENRHRRSVTLASHRFSSLAGAC*ALLHHP
Trigger: AGGGTGGTGAAGAAGAGCCCAGCAAGCTCCTGCCAG...GCTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
3UTR CAA 72 bp TCGGTGACGCTGGCATCACACAGGTTCAGCAGCACATaGAGGCCCAGGGGTTTGAGGGAGGTGAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SVTLASHRFSST*RPRGLREVRCS
Trigger: GCTGCACCTCACCTCCCTCAAACCCCTGGGCCTCAATGTGCTGCTGAACCTGTGTGATGCCAGCGTCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR TCA 90 bp GAGGGACCCACCCGCGTAGATGGAGGAAGGTTTAGGCCTCCCTTTGCCAGCCACGCAGGCATGCCCAGATaGATGTGGTCACCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: EGPTRVDGGRFRPPFASHAGMPR*MWSPLK
Trigger: TTTCAGGGGTGACCACATTCATCTGGGCATGCCTGC...GTGGCTGGCAAAGGGAGGCCTAAACCTTCCTCCATCTACGCGGGTGGGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGTCACCGACTGCACTGTaGACCGCTCATTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGSPTAL*TAHCPG
Trigger: CCCTGGACAATGAGCGGTTCACAGTGCAGTCGGTGA...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTCACCGACTGCACTGTaGACCGCTCATTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHSPTAL*TAHCPG
Trigger: CCCTGGACAATGAGCGGTTCACAGTGCAGTCGGTGA...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGGCTGGGATTTGGCCATaGCAGGATCCCCTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGAGIWP*QDPLFV
Trigger: GACAAACAGGGGATCCTGTCATGGCCAAATCCCAGC...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGCAGCTCGCACATGGTaGAGATGCTGCTTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHAARTW*RCCFGR
Trigger: CCGGCCAAAGCAGCATCTTCACCATGTGCGAGCTGC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATAGGCCTGGGCCATGCTaGTGCTGGTGGCGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHRPGPC*CWWRSQ
Trigger: TTGGCTACGCCACCAGCATCAGCATGGCCCAGGCCT...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp TCCACGGCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCTCCAAGAAAGGAACTGGATaGCCACAAGAGTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: STAALGVGRVGQGCCCCSKKGTG*PQESAG
Trigger: GCCAGCTGACTCTTGTGGTCATCCAGTTCCTTTCTT...GGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGAAGAAAGGAACTGGATaGCCACAAGAGTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWKKGTG*PQESAG
Trigger: GCCAGCTGACTCTTGTGGTCATCCAGTTCCTTTCTT...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp TCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGCCAGATGGGTGTTTGCTaGGGCCATGCGCTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: SENRHRRSVTLASHRFSSQMGVC*GHALCG
Trigger: ACCACAAAGCGCATGGCCGCAGCAAACACCCATCTG...GCTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR GCA 90 bp GTCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGAGCCAGATGGGTGTTTaGTGCGGCCATGCGCTTTGT +
Preference number: 4 (lower is better)
Translates to: VGESAQALGDAGITQVQQSQMGV*CGHALC
Trigger: ACAAAGCGCATGGCCGCAGCAAACACCCATCTGGCT...CTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR GCA 90 bp GCACGGCGCTGTGGCTCTCTTGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCTTGAGGGAGGTGAGGTaGAGCTGCCAGTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: ARRCGSLAGRCCTGGRRILREVR*SCQLES
Trigger: TGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAA...GATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR GCA 90 bp AGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGCACATTGAGGCCCAGGCTTGCAGGGCGATGTTaGACAGGTGGTCGGAGAATC +
Preference number: 4 (lower is better)
Translates to: RRSVTLASHRFSSTLRPRLAGRC*TGGRRI
Trigger: GATTCTCCGACCACCTGTGCAACATCGCCCTGCAAG...CCTGGGCCTCAATGTGCTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR GCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGCGCTCAGGGCCTGCATaGAGTCTTCCTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGRSGPA*SLPSPA
Trigger: TGCTGGAGAAGGAAGACTGCATGCAGGCCCTGAGCG...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGGAGGGAAGGGCATCTTGGATTTaGTCAATGATCCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: GPCSIFRFRRETPPQREGRASWI*SMIPRS
Trigger: GCTGCGAGGGATCATTGACCAAATCCAAGATGCCCT...TCCCTCCCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp CGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCCACAGGTATTTCTTAATGGCACTGGGCCACTaGATCTCCCTGCCATCCCTG +
Preference number: 4 (lower is better)
Translates to: RGWADPGVALQTSHRYFLMALGH*ISLPSL
Trigger: CAGGGATGGCAGGGAGATCCAGTGGCCCAGTGCCAT...TAAGAAATACCTGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACAACCAGCAGGCTGACTaGCAGGTTGACCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHNQQAD*QVDQVS
Trigger: GGACACCTGGTCAACCTGCCAGTCAGCCTGCTGGTT...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGAACCAGCAGGCTGACTaGCAGGTTGACCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWNQQAD*QVDQVS
Trigger: GGACACCTGGTCAACCTGCCAGTCAGCCTGCTGGTT...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCTCCTCCAAAGAAGAGGACGCCATTCACCTaGAGCTGGAGGAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: PWELDASAKAAAVAPPKKRTPFT*SWRRVY
Trigger: GTACACCCTCCTCCAGCTCCAGGTGAATGGCGTCCT...CTTCTTTGGAGGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGAGGCCTTGCTCATCTaGGCCAGGACACGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHEALLI*ARTRAS
Trigger: AGAGGCCCGTGTCCTGGCCCAGATGAGCAAGGCCTC...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACAGCAGGCTGGAACTGTaGCTCAGCGTTGGCGATGTC +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHSRLEL*LSVGDV
Trigger: GACATCGCCAACGCTGAGCCACAGTTCCAGCCTGCT...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACTCATGGGGCTCGGGATaGCAGAAGGAGCGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHSWGSG*QKERVD
Trigger: ATCCACCCGCTCCTTCTGCCATCCCGAGCCCCATGA...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACAGGGCGTCTCGTTCATaGGGCTCGGGATGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHRASRS*GSGWQK
Trigger: CTTCTGCCATCCCGAGCCCCATGAACGAGACGCCCT...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGCGCACGCTCCTGCTCATTaGAAAGGTGCAGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PRLTGSQLEPGTGRGSRAHAPAH*KGAGCC
Trigger: ACAACACCCTGCACCTTTCCAATGAGCAGGAGCGTG...CGCCCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCGCGATGTTGCACAGGTaGTCGGAGAATCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGAMLHR*SENRHR
Trigger: CCTGTGCCGATTCTCCGACCACCTGTGCAACATCGC...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGGCCCCAGGGCACATaGACGGGCAGCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFRPQGT*TGSTAL
Trigger: CAGCGCCGTGCTGCCCGTCCATGTGCCCTGGGGCCT...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACATGTCCAGCCGGGCCTaGTACTGGGAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHMSSRA*YWEDTM
Trigger: CATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACAT...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTCGCTGTCCGTAGGCTaGAAGCTGATGAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHSLSVG*KLMRSE
Trigger: CTCGGACCTCATCAGCTTCCAGCCTACGGACAGCGA...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATAGCTGTTCCGCAGGTTaGCAGAGCTGCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHSCSAG*QSCPGS
Trigger: GCTGCCTGGGCAGCTCTGCCAACCTGCGGAACAGCT...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATCCAGGAGCAACGGGATaGGTACAGGGGATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHPGATG*VQGIQG
Trigger: GCCCTGGATCCCCTGTACCCATCCCGTTGCTCCTGG...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGAGGAGTGGCGGCAGCTaGACCAGGCAAGAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWRSGGS*TRQERN
Trigger: GTTCCTTTCTTGCCTGGTCCAGCTGCCGCCACTCCT...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGCCACAGGATGTCGGTaGTACTCAGGAGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHATGCR*YSGVAA
Trigger: TGCCGCCACTCCTGAGTACCACCGACATCCTGTGGC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGTTCTTGGGAATGGACTaGAGGTTTTTCCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWFLGMD*RFFPVA
Trigger: GGCAACGGGGAAAAACCTCCAGTCCATTCCCAAGAA...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCGTCCTCAAACCAGGCTaGAGCCCTGTCGTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGVLKPG*SPVVVA
Trigger: AGCAACGACGACAGGGCTCCAGCCTGGTTTGAGGAC...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCTCCTCCAGGCCAAAGTaGACGTGGCTGTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGSSRPK*TWLSLC
Trigger: ACACAGGGACAGCCACGTCCACTTTGGCCTGGAGGA...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGGCTTCACGATCTCATTaGTCACCACCACAAGGACCA +
Preference number: 4 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWASRSH*SPPQGP
Trigger: TGGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGC...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCCACAGGTATTTCTTACCTGAGAGGACACAATaGGGGAGGGGCTTCGGACCA +
Preference number: 4 (lower is better)
Translates to: RGWADPGVALQTSHRYFLPERTQ*GRGFGP
Trigger: TGGTCCGAAGCCCCTCCCCCATTGTGTCCTCTCAGG...TAAGAAATACCTGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR CAA 72 bp CCCAGGGGTTTGAGGGAGGTGAGGTGCAGCTGCCAGTaGGAGTCATCAAACTGGATGCAGGAGGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PRGLREVRCSCQ*ESSNWMQEGFC
Trigger: GCAGAACCCCTCCTGCATCCAGTTTGATGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAAACCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR TCA 90 bp AGGGTGTACTGCCAGGAAGTGACCCCCGGGGCACTGAAGATGAAGCGCAGGGCAGCTGAGAGTATCCTCTaGGAACTTAGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RVYCQEVTPGALKMKRRAAESIL*ELSQQG
Trigger: TCCCTGCTGGCTAAGTTCTCAGAGGATACTCTCAGC...TGCCCTGCGCTTCATCTTCAGTGCCCCGGGGGTCACTTCCTGGCAGTACACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR TCA 90 bp TGGGCCAGGACACGGGCCTCTCCACAGGCAGTTGCCAGAACCCAGAGGACTGGACCTCCGTATAGCTGCTaGGAGTATCCTCTGAGAACT +
Preference number: 4 (lower is better)
Translates to: WARTRASPQAVARTQRTGPPYSC*EYPLRT
Trigger: AGTTCTCAGAGGATACTCTCAGCAGCTATACGGAGG...TCCAGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGGCCCGTGTCCTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR TCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACTTGCCATTGAGCTaGGAGGACAGGGCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHHLPLS*EDRAQF
Trigger: GAACTGCGCCCTGTCCTCTCAGCTCAATGGCAAGTG...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGCTCCAGGGCGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCAAACACCTTGCTTTTaGGCTCATCCTCCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GSRAKRGPCSIFRFRRETQTPCF*AHPPKR
Trigger: TCTCTTTGGAGGATGAGCTCAAAAGCAAGGTGTTTG...AGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCGCCCTGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGCCAGCAGAGAGATGCTaGGCAGAGGGTAGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWPAERC*AEGSKS
Trigger: GCTTTTGCTACCCTCTGCTCAGCATCTCTCTGCTGG...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGCCTCTAGGGAGCGCCTaGGGCCATACATTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWPLGSA*GHTFKS
Trigger: ACTCTTGAATGTATGGCCTCAGGCGCTCCCTAGAGG...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp GGAGGTGAGGTGCAGCTGCCAGTTGGAGTCATCAAACTGGATGCAGGAGGGGTTCCACCCGCTCCCTCCTaGAATCCGCTTCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GGEVQLPVGVIKLDAGGVPPAPS*NPLPVL
Trigger: AAGGACAGGAAGCGGATTTCAGGAGGGAGCGGGTGG...AACCCCTCCTGCATCCAGTTTGATGACTCCAACTGGCAGCTGCACCTCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR GCA 90 bp TTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGGACCACAGCAGAGCACTGCCTCCAGCTaGTCCTTCAGGACGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FYQLPERTQWGRGFGPQQSTASS*SFRTLR
Trigger: CCTCAGCGTCCTGAAGGAGCAGCTGGAGGCAGTGCT...CTGCTGTGGTCCGAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGTGGTGGAGGAAGCTaGTTCTCCACACCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHCGGGS*FSTPPS
Trigger: GGAAGGAGGTGTGGAGAAGCAGCTTCCTCCACCACA...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGTGTGGTGGAGGAAGCTaGTTCTCCACACCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGCGGGS*FSTPPS
Trigger: GGAAGGAGGTGTGGAGAAGCAGCTTCCTCCACCACA...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp TTGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACGAGGTGAGGTGCAGCTaGCAGTTGGAGTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: LQGDVAQVVGESAQALGDEVRCS*QLESSN
Trigger: GTTTGATGACTCCAACTGGCAGCTGCACCTCACCTC...GTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR GCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGCTTGCAGGGCGATGTTaGACAGGTGGTCGGAGAATC +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGLAGRC*TGGRRI
Trigger: GATTCTCCGACCACCTGTGCAACATCGCCCTGCAAG...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCAGACCACATCAGCGGTaGCATGGGACAGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGRPHQR*HGTASA
Trigger: AGCAGATGCTGTCCCATGGCACCGCTGATGTGGTCT...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGACGTTGTCAATGTTCTaGAGGTGGGGCCGCACTTGG +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGTLSMF*RWGRTW
Trigger: CCAAGTGCGGCCCCACCTGCAGAACATTGACAACGT...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGGAAGCACTTACGGATaGCATAGGTGGCATGCCGAG +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGGSTYG*HRWHAE
Trigger: CTCGGCATGCCACCTATGGCATCCGTAAGTGCTTCC...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp CCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCTCCTCCAAAGAAGTTCCAGTGCCACGGGTaGAGGAGCAAACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PWELDASAKAAAVAPPKKFQCHG*RSKPGN
Trigger: GTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAA...CTTCTTTGGAGGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCTTCCAGTGCCACGGGTaGAGGAGCAAACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGFQCHG*RSKPGN
Trigger: GTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAA...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp CGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCCACAGGTATTTCTTAGAGCTGGGTTTCCAGTaGCACGGGTGCAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: RGWADPGVALQTSHRYFLELGFQ*HGCRSK
Trigger: TTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTC...TAAGAAATACCTGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp CCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCTCCTCCAAAGAAGGTCGGCCAAGGCTGCTaGTGTTGCTCCTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: PWELDASAKAAAVAPPKKVGQGC*CCSSKE
Trigger: TTCTTTGGAGGAGCAACAGCAGCAGCCTTGGCCGAC...CTTCTTTGGAGGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCCATTCACCTGGAGCTaGAGGAGGGTGTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHPFTWS*RRVYCQ
Trigger: CTGGCAGTACACCCTCCTCCAGCTCCAGGTGAATGG...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GCACCCTCAGGAAGTGGCCCCAAATGCAGCGCAGCATTTCCTGAGAGGAGACAGAGGACGCCATTCACCTaGAGCTGGAGGAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: APSGSGPKCSAAFPERRQRTPFT*SWRRVY
Trigger: GTACACCCTCCTCCAGCTCCAGGTGAATGGCGTCCT...CTGTCTCCTCTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCCTGAGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR CCA 90 bp TTGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACCACGCTCCTGCTCATTaGAAAGGTGCAGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LHRWSENRHRRSVTLASHHAPAH*KGAGCC
Trigger: ACAACACCCTGCACCTTTCCAATGAGCAGGAGCGTG...GTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCCTGATGGTCTCCTCCTaGCGAAAGGTCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGLMVSS*RKVREQ
Trigger: CTGTTCCCTGACCTTTCGCCAGGAGGAGACCATCAG...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGCCACAGGATGTCGGTaGTACTCAGGAGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHATGCR*YSGVAA
Trigger: TGCCGCCACTCCTGAGTACCACCGACATCCTGTGGC...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCAGCCACCACAGCCAGTaGCTCAGAAGGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGSHHSQ*LRRESS
Trigger: TGAACTCTCCCTTCTGAGCCACTGGCTGTGGTGGCT...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp GCACCCTCAGGAAGTGGCCCCAAATGCAGCGCAGCATTTCCTGAGAGGAGACAGCTTGGATTTGGTCAATaGTCCCTCGCAGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: APSGSGPKCSAAFPERRQLGFGQ*SLAASA
Trigger: AGCGGAGGCTGCGAGGGATCATTGACCAAATCCAAG...CTGTCTCCTCTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCCTGAGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR TCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACTCTCCCTGCCATCCCTaGGGGCATCTTGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHSPCHP*GHLGFG
Trigger: ACCAAATCCAAGATGCCCTCAGGGATGGCAGGGAGA...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGTGTCCAGGCACCATCTaGTGTTGTCAATCACAGGGG +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGCPGTI*CCQSQG
Trigger: CCCCTGTGATTGACAACATCAGATGGTGCCTGGACA...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAGAGGCCGCCGCTTGGTaGCACAGGAGAGCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFREAAAW*HRRAAP
Trigger: TGGGGCGGCTCTCCTGTGTCACCAAGCGGCGGCCTC...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCGGAGGAGCAGTTGGTaGGGTTGCGGTCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVRRSSW*GCGPGS
Trigger: GCTCCCGGGACCGCAACCTCACCAACTGCTCCTCCG...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCCTCTAGGGAGCGCCTaGGGCCATACATTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHPLGSA*GHTFKS
Trigger: ACTCTTGAATGTATGGCCTCAGGCGCTCCCTAGAGG...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACATGTCCTTCCAGCACTaGCTCCAGCTGCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHMSFQH*LQLLLQ
Trigger: CTGAAGGAGCAGCTGGAGGCAGTGCTGGAAGGACAT...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp GGCCAGGACACGGGCCTCTCCACAGGCAGTTGCCAGAACCCAGAGGACTGGAAATGTAGCATCACCGACTaGACTGTGAACCGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GQDTGLSTGSCQNPEDWKCSITD*TVNRSL
Trigger: CAATGAGCGGTTCACAGTGCAGTCGGTGATGCTACA...TTTCCAGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGGCCCGTGTCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR GCA 90 bp CAGGAAGTGGCCCCAAATGCAGCGCAGCATTTCCTGAGAGGAGACAGCCTCCGTGGAAGTGGCCCCAAATaGAGCGCAGCATTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QEVAPNAAQHFLRGDSLRGSGPK*SAAFPE
Trigger: CTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCC...ACGGAGGCTGTCTCCTCTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR GCA 90 bp TCCCCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGAGTCATCAAACTGGATaGAGGAGGGGTTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPRLTGSQLEPGTGRGSRSHQTG*RRGSAG
Trigger: ACCAGCAGAACCCCTCCTGCATCCAGTTTGATGACT...CCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACTTGAGGGAGGTGAGGTaGAGCTGCCAGTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHLREVR*SCQLES
Trigger: TGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAA...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACACGTTGTCAATGTTCTaGAGGTGGGGCCGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHTLSMF*RWGRTW
Trigger: CCAAGTGCGGCCCCACCTGCAGAACATTGACAACGT...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGAAATGAAGACAGTGTaGAGGACAATCAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWEMKTV*RTIRAA
Trigger: GGCCGCCCTGATTGTCCTGCACACTGTCTTCATTTC...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGAGGGGCTTGGTGCGATaGACATGGGTGATGGAAATG +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGRGLVR*TWVMEM
Trigger: CATTTCCATCACCCATGTGCATCGCACCAAGCCCCT...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACCAAGGCTGCTGCTGTTaGTCCTCCAAAGAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHQGCCC*SSKEGW
Trigger: CCAACCTTCTTTGGAGGAGCAACAGCAGCAGCCTTG...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp CCCAGGGGTTTGAGGGAGGTGAGGTGCAGCTGCCAGTTGGAGTCATCAAACTGGACACTGGCAGGAGCTTaGTGGGCTCTTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: PRGLREVRCSCQLESSNWTLAGA*WALLHH
Trigger: GTGGTGAAGAAGAGCCCAGCAAGCTCCTGCCAGTGT...CCAGTTTGATGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAAACCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CCA 90 bp CGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCCACAGGTATTTCTTAGGAGGTCTGGATACATaGCACTGGGCCACTGGATCT +
Preference number: 4 (lower is better)
Translates to: RGWADPGVALQTSHRYFLGGLDT*HWATGS
Trigger: AGATCCAGTGGCCCAGTGCCATGTATCCAGACCTCC...TAAGAAATACCTGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGGAGGTCTGGATACATaGCACTGGGCCACTGGATCT +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHGGLDT*HWATGS
Trigger: AGATCCAGTGGCCCAGTGCCATGTATCCAGACCTCC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGCGCAAAAGGCATGTaGAGGTCTGGATACATGGCA +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWGAKGM*RSGYMA
Trigger: TGCCATGTATCCAGACCTCCACATGCCTTTTGCGCC...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GCAGCGCAGCATTTCCTGAGAGGAGACAGCCTCCGTATAGCTGCTGAGAGTATCAGAGCAGGGGGAGGATaGGCAGGACGCCATTCACCT +
Preference number: 4 (lower is better)
Translates to: AAQHFLRGDSLRIAAESIRAGGG*AGRHSP
Trigger: AGGTGAATGGCGTCCTGCCCATCCTCCCCCTGCTCT...GATACTCTCAGCAGCTATACGGAGGCTGTCTCCTCTCAGGAAATGCTGCGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR CCA 90 bp GCAGCGCAGCATTTCCTGAGAGGAGACAGCCTCCGTATAGCTGCTGAGAGTATCAGCACCCTCAGGAAGTaGCCCCAAATGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AAQHFLRGDSLRIAAESISTLRK*PQMQRS
Trigger: GCTGCGCTGCATTTGGGGCCACTTCCTGAGGGTGCT...GATACTCTCAGCAGCTATACGGAGGCTGTCTCCTCTCAGGAAATGCTGCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATAGCAGGCTGGAACTGTaGCTCAGCGTTGGCGATGTC +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHSRLEL*LSVGDV
Trigger: GACATCGCCAACGCTGAGCCACAGTTCCAGCCTGCT...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGTGCAGCTGCCAGTTaGAGTCATCAAACTGGATGC +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWGAAAS*SHQTGC
Trigger: GCATCCAGTTTGATGACTCCAACTGGCAGCTGCACC...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATACAGGGCGCAGTTCATaGGCTTGTAGGCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHTGRSS*ACRRRQ
Trigger: CTGCCTTCGCCTACAAGCCCATGAACTGCGCCCTGT...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCCACAGGTATTTCTTATACGGATGCCATAGGTaGCATGCCGAGCCTGTTCGA +
Preference number: 4 (lower is better)
Translates to: RGWADPGVALQTSHRYFLYGCHR*HAEPVR
Trigger: TCGAACAGGCTCGGCATGCCACCTATGGCATCCGTA...TAAGAAATACCTGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATAGGAGTGGCGGCAGCTaGACCAGGCAAGAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHRSGGS*TRQERN
Trigger: GTTCCTTTCTTGCCTGGTCCAGCTGCCGCCACTCCT...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGGTCTTCTTGGGAATaGACTGGAGGTTTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWGSSWE*TGGFSP
Trigger: CGGGGAAAAACCTCCAGTCCATTCCCAAGAAGACCC...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGCCGACAGCAGTCCATTaGCAAAGTCCTCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGPTAVH*QSPQTR
Trigger: CCTGGTTTGAGGACTTTGCCAATGGACTGCTGTCGG...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp TCCACGGCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCTCCTTGGTGCGATGCACATaGGTGATGGAAATGAAGACA +
Preference number: 4 (lower is better)
Translates to: STAALGVGRVGQGCCCCSLVRCT*VMEMKT
Trigger: TGTCTTCATTTCCATCACCCATGTGCATCGCACCAA...GGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGAGCCACCGCCGGGGGTaGGCAGACCCTGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGSHRRG*ADPGVA
Trigger: GGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCT...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
3UTR CAA 72 bp TCACACAGGTTCAGCAGCACATTGAGGCCCAGGGGTTaGAGGGAGGTGAGGTGCAGCTGCCAGTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SHRFSSTLRPRG*REVRCSCQLES
Trigger: TGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAAACCCCTGGGCCTCAATGTGCTGCTGAACCTGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR TCA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCCAGGCCTCAAAGCTATaGTGTCTCCTTCAACCAGCA +
Preference number: 4 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGQASKL*CLLQPA
Trigger: TGCTGGTTGAAGGAGACATCATAGCTTTGAGGCCTG...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCCATTGTCCAGGGCAGTaGCTGGTCGGGACAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFHCPGQ*LVGTGP
Trigger: TGGCCCTGTCCCGACCAGTCACTGCCCTGGACAATG...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp GCAGCGCAGCATTTCCTGAGAGGAGACAGCCTCCGTATAGCTGCTGAGAGTATCTCACCGACTGCACTGTaGACCGCTCATTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AAQHFLRGDSLRIAAESISPTAL*TAHCPG
Trigger: CCCTGGACAATGAGCGGTTCACAGTGCAGTCGGTGA...GATACTCTCAGCAGCTATACGGAGGCTGTCTCCTCTCAGGAAATGCTGCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR TCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGCACAGCACAGGACCGTaGCAGAGCCCAGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLHSTGP*QSPGCA
Trigger: TGCACAGCCTGGGCTCTGTCACGGTCCTGTGCTGTG...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGCTGGGATTTGGCCATaGCAGGATCCCCTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHAGIWP*QDPLFV
Trigger: GACAAACAGGGGATCCTGTCATGGCCAAATCCCAGC...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGCCTCGGTGTCCCTGCTaGAGCTCACGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLPRCPC*SSRWSQ
Trigger: CTGGCTCCAACGTGAGCTTCAGCAGGGACACCGAGG...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACGGCGGGCGTTCTGCTTaGTGGGGATGGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNGGRSA*WGWCWA
Trigger: TGCCCAGCACCATCCCCATCAAGCAGAACGCCCGCC...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGGCCTGGGCCATGCTaGTGCTGGTGGCGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFRPGPC*CWWRSQ
Trigger: TTGGCTACGCCACCAGCATCAGCATGGCCCAGGCCT...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGCAAGAGTGTCCCTGGTaGGGCCCAGGGAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLQECPW*GPGKSQ
Trigger: CTGGCTCTTCCCTGGGCCTCACCAGGGACACTCTTG...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGCTGAGAGTATCCTCTaGGAACTTAGCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHAESIL*ELSQQV
Trigger: CACCTGCTGGCTAAGTTCTCAGAGGATACTCTCAGC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579208.5
CDS-3UTR GCA 90 bp CAGCATCTCCAGGTGGTAGTCACACACAAAGTCCTCTGCTTCGTAGGGGTCGCTCAGTCGCCACGCTCCTaGTCATTGGAAAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QHLQVVVTHKVLCFVGVAQSPRS*SLERCR
Trigger: CCTGCACCTTTCCAATGAGCAGGAGCGTGGCGACTG...AGCGACCCCTACGAAGCAGAGGACTTTGTGTGTGACTACCACCTGGAGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR GCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGAGGTGAGGTGCAGCTaGCAGTTGGAGTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHEVRCS*QLESSN
Trigger: GTTTGATGACTCCAACTGGCAGCTGCACCTCACCTC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGCCAGATGGTTCTCCTaGTTGAAAAGCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHARWFS*LKSSLA
Trigger: GGCCAAGGAGCTTTTCAAGCAGGAGAACCATCTGGC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCGTCAGAGCTCCAGCTaGTGCGGCGGGCGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVRQSSS*CGGRSA
Trigger: AGCAGAACGCCCGCCGCAGCAGCTGGAGCTCTGACG...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATTTCCAGTGCCACGGGTaGAGGAGCAAACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHFQCHG*RSKPGN
Trigger: GTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAA...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGCCACAAGCAGTCAGCTaGAAGAACTTCCAACACCTC +
Preference number: 4 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGPQAVS*KNFQHL
Trigger: GAGGTGTTGGAAGTTCTTGCAGCTGACTGCTTGTGG...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375248.9
CDS-3UTR GCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACATCCATAGCTCTGCCTaGTTAAAGAGCATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHIHSSA*LKSMGQ
Trigger: CTGGCCCATGCTCTTTAAGCAGGCAGAGCTATGGAT...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375248.9
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGAGCAGCGGTTACTGTaGTGGAGGAAGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHEQRLL*WRKLLL
Trigger: GAGAAGCAGCTTCCTCCACCACAGTAACCGCTGCTC...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGTGCAAGGACCAGGATaGCGCAAAAGGCATGTGGAG +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHVQGPG*RKRHVE
Trigger: CTCCACATGCCTTTTGCGCCATCCTGGTCCTTGCAC...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACGCTCCTGCTCATTaGAAAGGTGCAGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHHAPAH*KGAGCC
Trigger: ACAACACCCTGCACCTTTCCAATGAGCAGGAGCGTG...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGGCAGCTTGGCCCGGTTaGAGTCCTCCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLAAWPG*SPPGSW
Trigger: CCAGCTTCCTGGAGGACTCCAACCGGGCCAAGCTGC...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACTCAATGTTCTGCAGGTaGGGCCGCACTTGGTGGATA +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHSMFCR*GRTWWI
Trigger: TATCCACCAAGTGCGGCCCCACCTGCAGAACATTGA...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGCTGTTCCGCAGGTTaGCAGAGCTGCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFSCSAG*QSCPGS
Trigger: GCTGCCTGGGCAGCTCTGCCAACCTGCGGAACAGCT...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCCCAGGAGCAACGGGATaGGTACAGGGGATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFPGATG*VQGIQG
Trigger: GCCCTGGATCCCCTGTACCCATCCCGTTGCTCCTGG...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGGGTGGTACTCAGGAGTaGCGGCAGCTGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLGGTQE*RQLDQA
Trigger: TGCCTGGTCCAGCTGCCGCCACTCCTGAGTACCACC...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTTCTTGGGAATGGACTaGAGGTTTTTCCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHFLGMD*RFFPVA
Trigger: GGCAACGGGGAAAAACCTCCAGTCCATTCCCAAGAA...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGCCAGGACACGGGCCTCTCCACAGGCAGTTGCCAGAACCCAGAGGACTGGAAAGTCCAGGCACCATCTTaGATTTGGTCAATGATCCCT +
Preference number: 4 (lower is better)
Translates to: GQDTGLSTGSCQNPEDWKVQAPS*IWSMIP
Trigger: AGGGATCATTGACCAAATCCAAGATGGTGCCTGGAC...TTTCCAGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGGCCCGTGTCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR TCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAGCTCCTTCAGGACGCTaGGGGCCTTCCGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRAPSGR*GPSAWT
Trigger: TGTCCACGCGGAAGGCCCTCAGCGTCCTGAAGGAGC...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp AAATGGAATTTATTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGCACGGCCAGTAGCATaGGTGAGGCCCCCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: KWNLFYQLPERTQWGRGFARPVA*VRPPAS
Trigger: ACTGGCCGGGGGCCTCACTCATGCTACTGGCCGTGC...GAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAATAAATTCCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp TTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGGACCACAGCAGTGTGCTCGTCATCCTTaGTCCCCCTCAGAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: FYQLPERTQWGRGFGPQQCARHP*SPSEKQ
Trigger: TTGCTTCTCTGAGGGGGATCAAGGATGACGAGCACA...CTGCTGTGGTCCGAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACCACAGCACAGGACCGTaGCAGAGCCCAGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNHSTGP*QSPGCA
Trigger: TGCACAGCCTGGGCTCTGTCACGGTCCTGTGCTGTG...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGAGGACACCATGCCCATaGAGATCTGGCCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLRTPCP*RSGRSG
Trigger: CCCTGAGCGGCCAGATCTTCATGGGCATGGTGTCCT...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp CGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCCACAGGTATTTCTTAATGGGCCAAGAGTACTaGAGGCATGCCCAGATGAAT +
Preference number: 4 (lower is better)
Translates to: RGWADPGVALQTSHRYFLMGQEY*RHAQMN
Trigger: ATTCATCTGGGCATGCCTGCAGTACTCTTGGCCCAT...TAAGAAATACCTGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp AGCTGCCAGTTGGAGTCATCAAACTGGATGCAGGAGGGGTTCTGCTGGTCCTGGACACACAAAGTCCTCTaGTTCGTAGGGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SCQLESSNWMQEGFCWSWTHKVL*FVGVAL
Trigger: GAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGT...CCAGGACCAGCAGAACCCCTCCTGCATCCAGTTTGATGACTCCAACTGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR GCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATCGTCCCAGAAGTCTGTaGAGGCCTCTAAGACCACAT +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHRPRSL*RPLRPH
Trigger: ATGTGGTCTTAGAGGCCTGCACAGACTTCTGGGACG...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACGCAGGTTGGCAGAGCTaGCCAGGCAGCAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNAGWQS*PGSRSP
Trigger: AGGTGACCTGCTGCCTGGGCAGCTCTGCCAACCTGC...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACGAGGTTTTTCCCCGTTaGCATAGACATGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHEVFPR*HRHDGA
Trigger: AGCTCCATCATGTCTATGGCAACGGGGAAAAACCTC...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTAAAAGCCGGTGCTGCTaGGGGCTCTGTGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVKSRCC*GLCGPL
Trigger: GAGAGGGCCACAGAGCCCCCAGCAGCACCGGCTTTT...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAGCAGGGGGAGGATaGGCAGGACGCCATTCACCT +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFRAGGG*AGRHSP
Trigger: AGGTGAATGGCGTCCTGCCCATCCTCCCCCTGCTCT...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp CCAGGTGGTAGTCACACACAAAGTCCTCTGCTTCGTAGGGGTCGCTCTCCATCCGGTGCAGCTGCCAGTTaGAGTCATCAAACTGGATGC +
Preference number: 4 (lower is better)
Translates to: PGGSHTQSPLLRRGRSPSGAAAS*SHQTGC
Trigger: GCATCCAGTTTGATGACTCCAACTGGCAGCTGCACC...GGATGGAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGTGACTACCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTAGGCCCCAGGGCACATaGACGGGCAGCACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSRPQGT*TGSTAL
Trigger: CAGCGCCGTGCTGCCCGTCCATGTGCCCTGGGGCCT...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATCGGTACAGCGCCAGATaGTTCTCCTGCTTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHRYSAR*FSCLKS
Trigger: GCTTTTCAAGCAGGAGAACCATCTGGCGCTGTACCG...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATCTCACACATGGTCTCTaGGGTGCAGTCGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHLTHGL*GAVGEK
Trigger: CTTTTCACCGACTGCACCCCAGAGACCATGTGTGAG...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGCGGCCCACCAGAGGTTaGTCAAGGGGCTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLRPTRG*SRGSFS
Trigger: GGAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCG...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCACCCTCAGGAAGTGGCCCCAAATGCAGCGCAGCATTTCCTGAGAGGAGACAGGCACCATCTTGGATTTaGTCAATGATCCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: APSGSGPKCSAAFPERRQAPSWI*SMIPRS
Trigger: GCTGCGAGGGATCATTGACCAAATCCAAGATGGTGC...CTGTCTCCTCTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCCTGAGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR TCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCTGGATAGGCCATCGGTaGGGTCCTCATGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFWIGHR*GPHGCC
Trigger: ACAGCAGCCATGAGGACCTCACCGATGGCCTATCCA...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCGATGCACTTGCCATTaGGCTGAGAGGACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVRCTCH*AERTGR
Trigger: GCGCCCTGTCCTCTCAGCTCAATGGCAAGTGCATCG...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AAATGGAATTTATTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGGCGGGCGTTCTGCTTaGTGGGGATGGTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KWNLFYQLPERTQWGRGFGGRSA*WGWCWA
Trigger: TGCCCAGCACCATCCCCATCAAGCAGAACGCCCGCC...GAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAATAAATTCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACAACAGGGCAGGCTGTTaGGCTGCCCTGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNNRAGC*AALTAA
Trigger: TGCAGCTGTCAGGGCAGCTCAACAGCCTGCCCTGTT...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTCGGAGGAGCAGTTGGTaGGGTTGCGGTCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSRRSSW*GCGPGS
Trigger: GCTCCCGGGACCGCAACCTCACCAACTGCTCCTCCG...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCGCCGTCTGGACCACCTaGCCCAGCAGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVAVWTT*PSSTTG
Trigger: GCCTGTGGTGCTGCTGGGTCAGGTGGTCCAGACGGC...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATATTCTATCAACTGCCTaGGAGGACACAATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHILSTA*EDTMGE
Trigger: CTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAAT...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTGGAGGCTCGCCCAGGTaGTTCTCCTTCAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVGGSPR*FSFRSM
Trigger: CATGGACCTGAAGGAGAAGCACCTGGGCGAGCCTCC...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGACGCTTCAGCCGGTCTTaGCGCCCGATGAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRRFSRS*RPMSTR
Trigger: CCTTGTGCTCATCGGGCGGCAAGACCGGCTGAAGCG...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATTGTAGCATCACCGACTaGACTGTGAACCGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHCSITD*TVNRSL
Trigger: CAATGAGCGGTTCACAGTGCAGTCGGTGATGCTACA...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp TTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGGACCACAGCAGTGCTCATTGGAAAGGTaGAGGGTGTTGTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FYQLPERTQWGRGFGPQQCSLER*RVLFRE
Trigger: CTCCCTGAACAACACCCTGCACCTTTCCAATGAGCA...CTGCTGTGGTCCGAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp AGCTGCCAGTTGGAGTCATCAAACTGGATGCAGGAGGGGTTCTGCTGGTCCTGGTGCTCATTGGAAAGGTaGAGGGTGTTGTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SCQLESSNWMQEGFCWSWCSLER*RVLFRE
Trigger: CTCCCTGAACAACACCCTGCACCTTTCCAATGAGCA...CCAGGACCAGCAGAACCCCTCCTGCATCCAGTTTGATGACTCCAACTGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR GCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGCAGTCGCCACGCTCCTaGTCATTGGAAAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLQSPRS*SLERCR
Trigger: CCTGCACCTTTCCAATGAGCAGGAGCGTGGCGACTG...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGCGTCAGAGCTCCAGCTaGTGCGGCGGGCGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGRQSSS*CGGRSA
Trigger: AGCAGAACGCCCGCCGCAGCAGCTGGAGCTCTGACG...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCCGCTCAGGGCCTGCATaGAGTCTTCCTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFRSGPA*SLPSPA
Trigger: TGCTGGAGAAGGAAGACTGCATGCAGGCCCTGAGCG...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTGGCCGCTCAGGGCCTaGATGCAGTCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNWPLRA*MQSSFS
Trigger: GGAGAAGGAAGACTGCATGCAGGCCCTGAGCGGCCA...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAGCAGGTTGGCAGAGCTaGCCAGGCAGCAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRAGWQS*PGSRSP
Trigger: AGGTGACCTGCTGCCTGGGCAGCTCTGCCAACCTGC...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACAGCTGCCCTGACAGCTaGAGGGGAGAAAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNSCPDS*RGERPS
Trigger: GGATGGCCTTTCTCCCCTGCAGCTGTCAGGGCAGCT...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGAGGTTTTTCCCCGTTaGCATAGACATGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHEVFPR*HRHDGA
Trigger: AGCTCCATCATGTCTATGGCAACGGGGAAAAACCTC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACCTGTGTGTCCACAGCTaGAGGTCCACAGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNLCVHS*RSTAVW
Trigger: CCAGACGGCTGTGGACCTGCAGCTGTGGACACACAG...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCGAGCAAGAAGCCGGGTaGTGCACAGAATCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFEQEAG*CTESGA
Trigger: TGCGCCTGATTCTGTGCAGCACCCGGCTTCTTGCTC...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375248.9
CDS-3UTR GCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATAACTTAGCCAGCAGGTaGTTCTCCTTCAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHNLASR*FSFRSM
Trigger: CATGGACCTGAAGGAGAAGCACCTGCTGGCTAAGTT...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579208.5
CDS-3UTR CCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACTCCCTGAGGGCATCTTaGATTTGGTCAATGATCCCT +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHSLRAS*IWSMIP
Trigger: AGGGATCATTGACCAAATCCAAGATGCCCTCAGGGA...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCCTGGATACATGGCACTaGGCCACTGGATCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFLDTWH*ATGSPC
Trigger: GCAGGGAGATCCAGTGGCCCAGTGCCATGTATCCAG...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTGGCTGTGCAGCAGGCTaGAACTGTGGCTCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVGCAAG*NCGSAL
Trigger: CAACGCTGAGCCACAGTTCCAGCCTGCTGCACAGCC...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCCTCTCCATCCCAGGCTaGGTCTTGCTGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFLSIPG*VLLGSS
Trigger: AGAAGAGCCCAGCAAGACCCAGCCTGGGATGGAGAG...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCACAGGGCGCAGTTCATaGGCTTGTAGGCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFTGRSS*ACRRRQ
Trigger: CTGCCTTCGCCTACAAGCCCATGAACTGCGCCCTGT...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCGGTGTGAGGGAGATGTaGCAGTTCCAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFGVREM*QFQPVS
Trigger: GGAGACAGGCTGGAACTGCCACATCTCCCTCACACC...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp CGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGCCACAGGTATTTCTTAAGGCAAGAAAGGAACTaGATGACCACAAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RGWADPGVALQTSHRYFLRQERN*MTTRVS
Trigger: GCTGACTCTTGTGGTCATCCAGTTCCTTTCTTGCCT...TAAGAAATACCTGTGGCTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAGGTGGTACTCAGGAGTaGCGGCAGCTGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRGGTQE*RQLDQA
Trigger: TGCCTGGTCCAGCTGCCGCCACTCCTGAGTACCACC...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATTTCTTGGGAATGGACTaGAGGTTTTTCCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHFLGMD*RFFPVA
Trigger: GGCAACGGGGAAAAACCTCCAGTCCATTCCCAAGAA...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCTGACACGGGGAGCTaGGTTTCCAGTGCCACGGGT +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNSDTGS*VSSATG
Trigger: ACCCGTGGCACTGGAAACCCAGCTCCCCGTGTCAGA...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTCCTCCACGGCAGCCTTaGGAGTTGGACGCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSPPRQP*ELDASA
Trigger: GGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGAGG...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTGAATGTGGTCACCCCTaGAAGGAAGGCTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVECGHP*KEGSSP
Trigger: TGGGGAGGAGCCTTCCTTTCAGGGGTGACCACATTC...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000579208.5
CDS-3UTR TCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGACTTCTTCCGCTCCCTaGGATGTCCTTCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLTSSAP*DVLPAL
Trigger: CAGTGCTGGAAGGACATCTCAGGGAGCGGAAGAAGT...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCGCTCCACCTTCCCGCTaGAGAACAGTACAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFAPPSR*RTVQSL
Trigger: CAGAGACTGTACTGTTCTTCAGCGGGAAGGTGGAGC...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGGGCACAGGCGCTCGGTaGCGCTGGCATCACACAGGT +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWGTGAR*RWHHTG
Trigger: ACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCC...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGGGCCCTCCTCCTCCATaGGGAGGAGCCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGGPPPP*GGALLH
Trigger: ATGCAGAAGGGCTCCTCCTCATGGAGGAGGAGGGCC...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AAATGGAATTTATTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCAGGCCTGGGCCATGCTaGTGCTGGTGGCGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: KWNLFYQLPERTQWGRGFRPGPC*CWWRSQ
Trigger: TTGGCTACGCCACCAGCATCAGCATGGCCCAGGCCT...GAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAATAAATTCCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAGCTGTTGAGCTGCCCTaGCAGCTGCAGGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRAVELP*QLQGRK
Trigger: CTTTCTCCCCTGCAGCTGTCAGGGCAGCTCAACAGC...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGGAAGACAGCGGGGTCTaGCACGGGGAGCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGEDSGV*HGELGF
Trigger: GAAACCCAGCTCCCCGTGTCAGACCCCGCTGTCTTC...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGACAGGCCCAGGGCTaGGGGAGGCTCGCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSGQAQG*GRLAFV
Trigger: AACAAAGGCGAGCCTCCCTCAGCCCTGGGCCTGTCC...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375248.9
CDS-3UTR GCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCTCTCCACAGGCAGTTaGCAGAACCCAGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVLSTGS*QNPEDW
Trigger: CCAGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAG...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGCAGATGGGTGTTTGCTaGGGCCATGCGCTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLQMGVC*GHALCG
Trigger: ACCACAAAGCGCATGGCCGCAGCAAACACCCATCTG...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGCCAGATGGGTGTTTaGTGCGGCCATGCGCTTTGT +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFSQMGV*CGHALC
Trigger: ACAAAGCGCATGGCCGCAGCAAACACCCATCTGGCT...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCCTTGCAGGGCGATGTTaGACAGGTGGTCGGAGAATC +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFLAGRC*TGGRRI
Trigger: GATTCTCCGACCACCTGTGCAACATCGCCCTGCAAG...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGCTTGCAGGGCGATGTTaGACAGGTGGTCGGAGAATC +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLLAGRC*TGGRRI
Trigger: GATTCTCCGACCACCTGTGCAACATCGCCCTGCAAG...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAGCGCTGTGGCTCTCTTaGAGGGCGATGTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRALWLS*RAMLHR
Trigger: CCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGC...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACCCATGGGACAGCATCTaGTCTGTGCTGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNPWDSI*SVLVVV
Trigger: CACCACCACCAGCACAGAGCAGATGCTGTCCCATGG...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGAGACCACATCAGCGGTaGCATGGGACAGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLRPHQR*HGTASA
Trigger: AGCAGATGCTGTCCCATGGCACCGCTGATGTGGTCT...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp TCCCCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGATTTATTCTATCAACTaGCTGAGAGGACACAATGGG +
Preference number: 4 (lower is better)
Translates to: SPRLTGSQLEPGTGRGSRIYSIN*LRGHNG
Trigger: CCCATTGTGTCCTCTCAGGCAGTTGATAGAATAAAT...CCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR GCA 90 bp TCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGCTCTTGGGCTCCTGTCTaGTTCTATGGACTATTAATA +
Preference number: 4 (lower is better)
Translates to: SENRHRRSVTLASHRFSSSWAPV*FYGLLI
Trigger: TATTAATAGTCCATAGAAGCAGACAGGAGCCCAAGA...GCTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACCTGGATACATGGCACTaGGCCACTGGATCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNLDTWH*ATGSPC
Trigger: GCAGGGAGATCCAGTGGCCCAGTGCCATGTATCCAG...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAGCACCCTCAGGAAGTaGCCCCAAATGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRSTLRK*PQMQRS
Trigger: GCTGCGCTGCATTTGGGGCCACTTCCTGAGGGTGCT...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGCAGGAGGGGTTCTGCTaGTCCTGGGACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGQEGFC*SWDRLS
Trigger: GCTGAGCCTGTCCCAGGACCAGCAGAACCCCTCCTG...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTGCGATGTTGCACAGGTaGTCGGAGAATCGGCACAGG +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVAMLHR*SENRHR
Trigger: CCTGTGCCGATTCTCCGACCACCTGTGCAACATCGC...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGGGCAGCACGGCGCTGTaGCTCTCTTGCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWGSTAL*LSCRAM
Trigger: CATCGCCCTGCAAGAGAGCCACAGCGCCGTGCTGCC...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCACCACAAGAGTCAGCTaGCACTGCAGCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFTTRVS*HCSRKR
Trigger: CCTCTTCCTGCTGCAGTGCCAGCTGACTCTTGTGGT...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp TTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGGACCACAGCAGAGTGCTGGGTCTTCTTaGGAATGGACTGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: FYQLPERTQWGRGFGPQQSAGSS*EWTGGF
Trigger: AAAACCTCCAGTCCATTCCCAAGAAGACCCAGCACT...CTGCTGTGGTCCGAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGACGGCCCACCAGAGGTTaGTCAAGGGGCTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRRPTRG*SRGSFS
Trigger: GGAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCG...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACAGGCCAAAGTGGACGTaGCTGTCCCTGTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNRPKWT*LSLCVH
Trigger: GTGGACACACAGGGACAGCCACGTCCACTTTGGCCT...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AAATGGAATTTATTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGGGGTGGGCAGACCCTaGAGTGGCCTTACAGACCAG +
Preference number: 4 (lower is better)
Translates to: KWNLFYQLPERTQWGRGFGVGRP*SGLTDQ
Trigger: CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCC...GAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAATAAATTCCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR TCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCTGTGCTCGTCATCCTTaGTCCCCCTCAGAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFCARHP*SPSEKQ
Trigger: TTGCTTCTCTGAGGGGGATCAAGGATGACGAGCACA...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTCACAGCACAGGACCGTaGCAGAGCCCAGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSHSTGP*QSPGCA
Trigger: TGCACAGCCTGGGCTCTGTCACGGTCCTGTGCTGTG...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGACACTTGCCATTGAGCTaGGAGGACAGGGCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRHLPLS*EDRAQF
Trigger: GAACTGCGCCCTGTCCTCTCAGCTCAATGGCAAGTG...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGAGGACACCATGCCCATaGAGATCTGGCCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGRTPCP*RSGRSG
Trigger: CCCTGAGCGGCCAGATCTTCATGGGCATGGTGTCCT...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCGGCCCTCCTCCTCCATaGGGAGGAGCCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVGPPPP*GGALLH
Trigger: ATGCAGAAGGGCTCCTCCTCATGGAGGAGGAGGGCC...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCGCGGCCGTGAGCTTCTaGGCCGACAGCAGTCCATTG +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVAAVSF*ADSSPL
Trigger: CAATGGACTGCTGTCGGCTCAGAAGCTCACGGCCGC...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGCGGCCGTGAGCTTCTaGGCCGACAGCAGTCCATTG +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWAAVSF*ADSSPL
Trigger: CAATGGACTGCTGTCGGCTCAGAAGCTCACGGCCGC...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTCAATCAGGGCGGCCGTaGGCTTCTGAGCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSQSGRP*ASEPTA
Trigger: TGCTGTCGGCTCAGAAGCTCACGGCCGCCCTGATTG...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGCAATCAGGGCGGCCGTaGGCTTCTGAGCCGACAGCA +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWQSGRP*ASEPTA
Trigger: TGCTGTCGGCTCAGAAGCTCACGGCCGCCCTGATTG...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCCAAGAGTGTCCCTGGTaGGGCCCAGGGAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVQECPW*GPGKSQ
Trigger: CTGGCTCTTCCCTGGGCCTCACCAGGGACACTCTTG...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCCGCTTCAGCCGGTCTTaGCGCCCGATGAGCACAAGG +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVRFSRS*RPMSTR
Trigger: CCTTGTGCTCATCGGGCGGCAAGACCGGCTGAAGCG...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCGAGGTGAGGTGCAGCTaGCAGTTGGAGTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFEVRCS*QLESSN
Trigger: GTTTGATGACTCCAACTGGCAGCTGCACCTCACCTC...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGGCCAGATGGTTCTCCTaGTTGAAAAGCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLARWFS*LKSSLA
Trigger: GGCCAAGGAGCTTTTCAAGCAGGAGAACCATCTGGC...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGCTGCGGCGGGCGTTCTaGTTGATGGGGATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWLRRAF*LMGMVL
Trigger: CAGCACCATCCCCATCAAGCAGAACGCCCGCCGCAG...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGCTGCGGCGGGCGTTCTaGTTGATGGGGATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWLRRAF*LMGMVL
Trigger: CAGCACCATCCCCATCAAGCAGAACGCCCGCCGCAG...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACACCTCCCCGTACTCTTaGATGATCTTTATCATCTCA +
Preference number: 4 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHTSPYS*MIFIIS
Trigger: TGAGATGATAAAGATCATGCAAGAGTACGGGGAGGT...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGAGCTGCCCTGACAGCTaGAGGGGAGAAAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGSCPDS*RGERPS
Trigger: GGATGGCCTTTCTCCCCTGCAGCTGTCAGGGCAGCT...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTGGAAGCACTTACGGATaGCATAGGTGGCATGCCGAG +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVGSTYG*HRWHAE
Trigger: CTCGGCATGCCACCTATGGCATCCGTAAGTGCTTCC...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGCGCCTTTGTTGCCTTTaGCCTGATGGGGCATCCATA +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLRLCCL*PDGASI
Trigger: TATGGATGCCCCATCAGGGCAAAGGCAACAAAGGCG...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375248.9
CDS-3UTR CCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGACCATTCACCTGGAGCTaGAGGAGGGTGTACTGCCAG +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRPFTWS*RRVYCQ
Trigger: CTGGCAGTACACCCTCCTCCAGCTCCAGGTGAATGG...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGAGCACCCTCAGGAAGTaGCCCCAAATGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGSTLRK*PQMQRS
Trigger: GCTGCGCTGCATTTGGGGCCACTTCCTGAGGGTGCT...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAGCAGGCTGGAACTGTaGCTCAGCGTTGGCGATGTC +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRSRLEL*LSVGDV
Trigger: GACATCGCCAACGCTGAGCCACAGTTCCAGCCTGCT...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGACAGGCTGGGTCTTGCTaGGCTCTTCTTCACCACCCT +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRQAGSC*ALLHHP
Trigger: AGGGTGGTGAAGAAGAGCCCAGCAAGACCCAGCCTG...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGCAGGAGGGGTTCTGCTaGTCCTGGGACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWQEGFC*SWDRLS
Trigger: GCTGAGCCTGTCCCAGGACCAGCAGAACCCCTCCTG...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCGGTGCAGCTGCCAGTTaGAGTCATCAAACTGGATGC +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFGAAAS*SHQTGC
Trigger: GCATCCAGTTTGATGACTCCAACTGGCAGCTGCACC...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGATCGCTGTCCGTAGGCTaGAAGCTGATGAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRSLSVG*KLMRSE
Trigger: CTCGGACCTCATCAGCTTCCAGCCTACGGACAGCGA...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCGCAGCTTGGCCCGGTTaGAGTCCTCCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVAAWPG*SPPGSW
Trigger: CCAGCTTCCTGGAGGACTCCAACCGGGCCAAGCTGC...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGAGGCCATCCGAGGCCTaGGCCATGCTGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWRPSEA*AMLMLV
Trigger: CACCAGCATCAGCATGGCCCAGGCCTCGGATGGCCT...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCGGTGGTACTCAGGAGTaGCGGCAGCTGGACCAGGCA +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVGGTQE*RQLDQA
Trigger: TGCCTGGTCCAGCTGCCGCCACTCCTGAGTACCACC...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGGGGTCTTCTTGGGAATaGACTGGAGGTTTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLGSSWE*TGGFSP
Trigger: CGGGGAAAAACCTCCAGTCCATTCCCAAGAAGACCC...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAACTTCTTCCGCTCCCTaGGATGTCCTTCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRTSSAP*DVLPAL
Trigger: CAGTGCTGGAAGGACATCTCAGGGAGCGGAAGAAGT...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCCCTCCGTATAGCTGCTaGGAGTATCCTCTGAGAACT +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFPPYSC*EYPLRT
Trigger: AGTTCTCAGAGGATACTCTCAGCAGCTATACGGAGG...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTGGATAGGCCATCGGTaGGGTCCTCATGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGWIGHR*GPHGCC
Trigger: ACAGCAGCCATGAGGACCTCACCGATGGCCTATCCA...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGCGATGCACTTGCCATTaGGCTGAGAGGACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWRCTCH*AERTGR
Trigger: GCGCCCTGTCCTCTCAGCTCAATGGCAAGTGCATCG...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGGCAGCTCGCACATGGTaGAGATGCTGCTTTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWAARTW*RCCFGR
Trigger: CCGGCCAAAGCAGCATCTTCACCATGTGCGAGCTGC...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTTCATCTCGGGACACCTaGTTCAGGTCATCATGCAGG +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVSSRDT*FRSSCR
Trigger: CCTGCATGATGACCTGAATCAGGTGTCCCGAGATGA...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCATCTCGGGACACCTaGTTCAGGTCATCATGCAGG +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNSSRDT*FRSSCR
Trigger: CCTGCATGATGACCTGAATCAGGTGTCCCGAGATGA...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGCTGTTGAGCTGCCCTaGCAGCTGCAGGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWAVELP*QLQGRK
Trigger: CTTTCTCCCCTGCAGCTGTCAGGGCAGCTCAACAGC...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGAACAGGGCAGGCTGTTaGGCTGCCCTGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWNRAGC*AALTAA
Trigger: TGCAGCTGTCAGGGCAGCTCAACAGCCTGCCCTGTT...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAGTACTGCAGGCATaGCCAGATGAATGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFRVLQA*PDECGH
Trigger: GTGACCACATTCATCTGGGCATGCCTGCAGTACTCT...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000579208.5
CDS-3UTR GCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAGGAAGTGGCCCCAAATaGAGCGCAGCATTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRGSGPK*SAAFPE
Trigger: CTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCC...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCTGCTCATTGGAAAGGTaGAGGGTGTTGTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFCSLER*RVLFRE
Trigger: CTCCCTGAACAACACCCTGCACCTTTCCAATGAGCA...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCCCAGGCTGGGTCTTaGTGGGCTCTTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGSQAGS*WALLHH
Trigger: GTGGTGAAGAAGAGCCCAGCAAGACCCAGCCTGGGA...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGAGTCATCAAACTGGATaGAGGAGGGGTTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SATGAGANLETFMIQTPLSHQTG*RRGSAG
Trigger: ACCAGCAGAACCCCTCCTGCATCCAGTTTGATGACT...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGTGGCCGCTCAGGGCCTaGATGCAGTCTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWWPLRA*MQSSFS
Trigger: GGAGAAGGAAGACTGCATGCAGGCCCTGAGCGGCCA...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACAGGGGCTTGGTGCGATaGACATGGGTGATGGAAATG +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNRGLVR*TWVMEM
Trigger: CATTTCCATCACCCATGTGCATCGCACCAAGCCCCT...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGCTGTGTGTCCACAGCTaGAGGTCCACAGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWLCVHS*RSTAVW
Trigger: CCAGACGGCTGTGGACCTGCAGCTGTGGACACACAG...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGATGGCACTGGGCCACTaGATCTCCCTGCCATCCCTG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWMALGH*ISLPSL
Trigger: CAGGGATGGCAGGGAGATCCAGTGGCCCAGTGCCAT...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGAGCACCCTCAGGAAGTaGCCCCAAATGCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWSTLRK*PQMQRS
Trigger: GCTGCGCTGCATTTGGGGCCACTTCCTGAGGGTGCT...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGAGGGCGTCTCGTTCATaGGGCTCGGGATGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWRASRS*GSGWQK
Trigger: CTTCTGCCATCCCGAGCCCCATGAACGAGACGCCCT...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGGTTCTGCTGGTCCTaGGACAGGCTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSGFCWS*DRLSIS
Trigger: GGAGATGCTGAGCCTGTCCCAGGACCAGCAGAACCC...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGGGGTTCTGCTGGTCCTaGGACAGGCTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWGFCWS*DRLSIS
Trigger: GGAGATGCTGAGCCTGTCCCAGGACCAGCAGAACCC...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACGGTGCAGCTGCCAGTTaGAGTCATCAAACTGGATGC +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNGAAAS*SHQTGC
Trigger: GCATCCAGTTTGATGACTCCAACTGGCAGCTGCACC...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGATGCCCATGAAGATCTaGCCGCTCAGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGMPMKI*PLRACM
Trigger: CATGCAGGCCCTGAGCGGCCAGATCTTCATGGGCAT...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGATGTCCAGCCGGGCCTaGTACTGGGAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWMSSRA*YWEDTM
Trigger: CATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACAT...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGATACGGATGCCATAGGTaGCATGCCGAGCCTGTTCGA +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRYGCHR*HAEPVR
Trigger: TCGAACAGGCTCGGCATGCCACCTATGGCATCCGTA...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAACCACAAGAGTCAGCTaGCACTGCAGCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRTTRVS*HCSRKR
Trigger: CCTCTTCCTGCTGCAGTGCCAGCTGACTCTTGTGGT...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCCTCCGTATAGCTGCTaGGAGTATCCTCTGAGAACT +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVPPYSC*EYPLRT
Trigger: AGTTCTCAGAGGATACTCTCAGCAGCTATACGGAGG...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGGCTGGGATTTGGCCATaGCAGGATCCCCTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGAGIWP*QDPLFV
Trigger: GACAAACAGGGGATCCTGTCATGGCCAAATCCCAGC...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTTGGATAGGCCATCGGTaGGGTCCTCATGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSWIGHR*GPHGCC
Trigger: ACAGCAGCCATGAGGACCTCACCGATGGCCTATCCA...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACATGGGCCAAGAGTACTaGAGGCATGCCCAGATGAAT +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNMGQEY*RHAQMN
Trigger: ATTCATCTGGGCATGCCTGCAGTACTCTTGGCCCAT...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000579208.5
CDS-3UTR GCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCCTCTCCACAGGCAGTTaGCAGAACCCAGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVLSTGS*QNPEDW
Trigger: CCAGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAG...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTCAGTCGCCACGCTCCTaGTCATTGGAAAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSQSPRS*SLERCR
Trigger: CCTGCACCTTTCCAATGAGCAGGAGCGTGGCGACTG...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTTCCCAGGCTGGGTCTTaGTGGGCTCTTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSSQAGS*WALLHH
Trigger: GTGGTGAAGAAGAGCCCAGCAAGACCCAGCCTGGGA...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAACACACAAAGTCCTCTaGTTCGTAGGGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRTHKVL*FVGVAL
Trigger: GAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGT...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGCGCTCAGGGCCTGCATaGAGTCTTCCTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWRSGPA*SLPSPA
Trigger: TGCTGGAGAAGGAAGACTGCATGCAGGCCCTGAGCG...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCGAGGTTTTTCCCCGTTaGCATAGACATGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFEVFPR*HRHDGA
Trigger: AGCTCCATCATGTCTATGGCAACGGGGAAAAACCTC...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCGAGCTGGGTTTCCAGTaGCACGGGTGCAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVELGFQ*HGCRSK
Trigger: TTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTC...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGGAGGCTCGCCTTTGTTaGCTTTGCCCTGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWEARLC*LCPDGA
Trigger: TGCCCCATCAGGGCAAAGGCAACAAAGGCGAGCCTC...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375248.9
CDS-3UTR CCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGGAGCAGCGGTTACTGTaGTGGAGGAAGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGEQRLL*WRKLLL
Trigger: GAGAAGCAGCTTCCTCCACCACAGTAACCGCTGCTC...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTAGGACGCCATTCACCTaGAGCTGGAGGAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSRTPFT*SWRRVY
Trigger: GTACACCCTCCTCCAGCTCCAGGTGAATGGCGTCCT...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGCTCTCCATCCCAGGCTaGGTCTTGCTGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWLSIPG*VLLGSS
Trigger: AGAAGAGCCCAGCAAGACCCAGCCTGGGATGGAGAG...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGATGCCCATGAAGATCTaGCCGCTCAGGGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWMPMKI*PLRACM
Trigger: CATGCAGGCCCTGAGCGGCCAGATCTTCATGGGCAT...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCGGTGTGAGGGAGATGTaGCAGTTCCAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVGVREM*QFQPVS
Trigger: GGAGACAGGCTGGAACTGCCACATCTCCCTCACACC...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGTGTGAGGGAGATGTaGCAGTTCCAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSGVREM*QFQPVS
Trigger: GGAGACAGGCTGGAACTGCCACATCTCCCTCACACC...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTCGCTGTCCGTAGGCTaGAAGCTGATGAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVSLSVG*KLMRSE
Trigger: CTCGGACCTCATCAGCTTCCAGCCTACGGACAGCGA...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGATCAATGTTCTGCAGGTaGGGCCGCACTTGGTGGATA +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRSMFCR*GRTWWI
Trigger: TATCCACCAAGTGCGGCCCCACCTGCAGAACATTGA...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTTTATCATCTCACACATaGTCTCTGGGGTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVLSSHT*SLGCSR
Trigger: CCGACTGCACCCCAGAGACCATGTGTGAGATGATAA...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGGCAAGAAAGGAACTaGATGACCACAAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: ATGAGANLETFMIQTPLFRQERN*MTTRVS
Trigger: GCTGACTCTTGTGGTCATCCAGTTCCTTTCTTGCCT...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTAGGAGTGGCGGCAGCTaGACCAGGCAAGAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSRSGGS*TRQERN
Trigger: GTTCCTTTCTTGCCTGGTCCAGCTGCCGCCACTCCT...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGTCCTCAAACCAGGCTaGAGCCCTGTCGTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSVLKPG*SPVVVA
Trigger: AGCAACGACGACAGGGCTCCAGCCTGGTTTGAGGAC...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGAGGCCAAAGTGGACGTaGCTGTCCCTGTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWRPKWT*LSLCVH
Trigger: GTGGACACACAGGGACAGCCACGTCCACTTTGGCCT...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTCCTCCAGGCCAAAGTaGACGTGGCTGTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVSSRPK*TWLSLC
Trigger: ACACAGGGACAGCCACGTCCACTTTGGCCTGGAGGA...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGAGCCACCACAGCCAGTaGCTCAGAAGGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGSHHSQ*LRRESS
Trigger: TGAACTCTCCCTTCTGAGCCACTGGCTGTGGTGGCT...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACATGTACAAACCCCAGTaGGTCTGTCACAGTCACAAC +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNMYKPQ*VCHSHN
Trigger: GTTGTGACTGTGACAGACTCACTGGGGTTTGTACAT...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000579208.5
CDS-3UTR TCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTTCTCCCTGCCATCCCTaGGGGCATCTTGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSSPCHP*GHLGFG
Trigger: ACCAAATCCAAGATGCCCTCAGGGATGGCAGGGAGA...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGGCTCCACCTTCCCGCTaGAGAACAGTACAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWAPPSR*RTVQSL
Trigger: CAGAGACTGTACTGTTCTTCAGCGGGAAGGTGGAGC...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGCCAGCAGAGAGATGCTaGGCAGAGGGTAGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWPAERC*AEGSKS
Trigger: GCTTTTGCTACCCTCTGCTCAGCATCTCTCTGCTGG...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGCAGATGGGTGTTTGCTaGGGCCATGCGCTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWQMGVC*GHALCG
Trigger: ACCACAAAGCGCATGGCCGCAGCAAACACCCATCTG...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCAGCCAGATGGGTGTTTaGTGCGGCCATGCGCTTTGT +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVSQMGV*CGHALC
Trigger: ACAAAGCGCATGGCCGCAGCAAACACCCATCTGGCT...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGTTGAGGGAGGTGAGGTaGAGCTGCCAGTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWLREVR*SCQLES
Trigger: TGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAA...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTTGAGGGAGGTGAGGTaGAGCTGCCAGTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVLREVR*SCQLES
Trigger: TGACTCCAACTGGCAGCTGCACCTCACCTCCCTCAA...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGCGTCCCAGAAGTCTGTaGAGGCCTCTAAGACCACAT +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGRPRSL*RPLRPH
Trigger: ATGTGGTCTTAGAGGCCTGCACAGACTTCTGGGACG...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGACGTTGTCAATGTTCTaGAGGTGGGGCCGCACTTGG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWTLSMF*RWGRTW
Trigger: CCAAGTGCGGCCCCACCTGCAGAACATTGACAACGT...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTGCAAGGACCAGGATaGCGCAAAAGGCATGTGGAG +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWVQGPG*RKRHVE
Trigger: CTCCACATGCCTTTTGCGCCATCCTGGTCCTTGCAC...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGTACGGATGCCATAGGTaGCATGCCGAGCCTGTTCGA +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWYGCHR*HAEPVR
Trigger: TCGAACAGGCTCGGCATGCCACCTATGGCATCCGTA...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGCCGACAGCAGTCCATTaGCAAAGTCCTCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGPTAVH*QSPQTR
Trigger: CCTGGTTTGAGGACTTTGCCAATGGACTGCTGTCGG...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAGCTTCACGATCTCATTaGTCACCACCACAAGGACCA +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRASRSH*SPPQGP
Trigger: TGGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGC...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGTGTCCAGGCACCATCTaGTGTTGTCAATCACAGGGG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWCPGTI*CCQSQG
Trigger: CCCCTGTGATTGACAACATCAGATGGTGCCTGGACA...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCGCTGAGAGTATCCTCTaGGAACTTAGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVAESIL*ELSQQG
Trigger: TCCCTGCTGGCTAAGTTCTCAGAGGATACTCTCAGC...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCCCCGTACTCTTGCATaGTCTTTATCATCTCACACA +
Preference number: 4 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVPRTLA*SLSSHT
Trigger: TGTGTGAGATGATAAAGATCATGCAAGAGTACGGGG...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTTGTTGCCTTTGCCCTaGTGGGGCATCCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVLLPLP*WGIHSS
Trigger: AGAGCTATGGATGCCCCATCAGGGCAAAGGCAACAA...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375248.9
CDS-3UTR GCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGAGAGTACTGCAGGCATaGCCAGATGAATGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGRVLQA*PDECGH
Trigger: GTGACCACATTCATCTGGGCATGCCTGCAGTACTCT...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000579208.5
CDS-3UTR GCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTACACACAAAGTCCTCTaGTTCGTAGGGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSTHKVL*FVGVAL
Trigger: GAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGT...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGCCAGATGGTTCTCCTaGTTGAAAAGCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSARWFS*LKSSLA
Trigger: GGCCAAGGAGCTTTTCAAGCAGGAGAACCATCTGGC...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGAAATGAAGACAGTGTaGAGGACAATCAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSEMKTV*RTIRAA
Trigger: GGCCGCCCTGATTGTCCTGCACACTGTCTTCATTTC...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGGAAATGAAGACAGTGTaGAGGACAATCAGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWEMKTV*RTIRAA
Trigger: GGCCGCCCTGATTGTCCTGCACACTGTCTTCATTTC...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTAGGGGCTTGGTGCGATaGACATGGGTGATGGAAATG +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSRGLVR*TWVMEM
Trigger: CATTTCCATCACCCATGTGCATCGCACCAAGCCCCT...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGTACAGTCTCTGGGCTaGGATTTGGCCATGACAGGA +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSVQSLG*DLAMTG
Trigger: TCCTGTCATGGCCAAATCCCAGCCCAGAGACTGTAC...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTCACGCTCCTGCTCATTaGAAAGGTGCAGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSHAPAH*KGAGCC
Trigger: ACAACACCCTGCACCTTTCCAATGAGCAGGAGCGTG...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCCGGTACAGCGCCAGATaGTTCTCCTGCTTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVRYSAR*FSCLKS
Trigger: GCTTTTCAAGCAGGAGAACCATCTGGCGCTGTACCG...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTCAATGTTCTGCAGGTaGGGCCGCACTTGGTGGATA +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVSMFCR*GRTWWI
Trigger: TATCCACCAAGTGCGGCCCCACCTGCAGAACATTGA...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCCTCACACATGGTCTCTaGGGTGCAGTCGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVLTHGL*GAVGEK
Trigger: CTTTTCACCGACTGCACCCCAGAGACCATGTGTGAG...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGGGGTCTTCTTGGGAATaGACTGGAGGTTTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWGSSWE*TGGFSP
Trigger: CGGGGAAAAACCTCCAGTCCATTCCCAAGAAGACCC...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGCAGGCCTCAAAGCTATaGTGTCTCCTTCAACCAGCA +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWQASKL*CLLQPA
Trigger: TGCTGGTTGAAGGAGACATCATAGCTTTGAGGCCTG...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR TCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGCCTCCGTATAGCTGCTaGGAGTATCCTCTGAGAACT +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWPPYSC*EYPLRT
Trigger: AGTTCTCAGAGGATACTCTCAGCAGCTATACGGAGG...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGACCCCGTACTCTTGCATaGTCTTTATCATCTCACACA +
Preference number: 4 (lower is better)
Translates to: TGAGANLETFMIQTPLFRPRTLA*SLSSHT
Trigger: TGTGTGAGATGATAAAGATCATGCAAGAGTACGGGG...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCAAGAAAGGAACTGGATaGCCACAAGAGTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVKKGTG*PQESAG
Trigger: GCCAGCTGACTCTTGTGGTCATCCAGTTCCTTTCTT...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGTGTAGCATCACCGACTaGACTGTGAACCGCTCATTG +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWCSITD*TVNRSL
Trigger: CAATGAGCGGTTCACAGTGCAGTCGGTGATGCTACA...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR GCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGCTCATTGGAAAGGTaGAGGGTGTTGTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVCSLER*RVLFRE
Trigger: CTCCCTGAACAACACCCTGCACCTTTCCAATGAGCA...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGAGTCATCAAACTGGATaGAGGAGGGGTTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWSHQTG*RRGSAG
Trigger: ACCAGCAGAACCCCTCCTGCATCCAGTTTGATGACT...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACACCTCCCCGTACTCTTaGATGATCTTTATCATCTCA +
Preference number: 4 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNTSPYS*MIFIIS
Trigger: TGAGATGATAAAGATCATGCAAGAGTACGGGGAGGT...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGAGGGCATCTTGGATTTaGTCAATGATCCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWRASWI*SMIPRS
Trigger: GCTGCGAGGGATCATTGACCAAATCCAAGATGCCCT...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGTTATCATCTCACACATaGTCTCTGGGGTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWLSSHT*SLGCSR
Trigger: CCGACTGCACCCCAGAGACCATGTGTGAGATGATAA...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTTATCATCTCACACATaGTCTCTGGGGTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVLSSHT*SLGCSR
Trigger: CCGACTGCACCCCAGAGACCATGTGTGAGATGATAA...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGCTTCACGATCTCATTaGTCACCACCACAAGGACCA +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSASRSH*SPPQGP
Trigger: TGGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGC...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGATGTACAAACCCCAGTaGGTCTGTCACAGTCACAAC +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWMYKPQ*VCHSHN
Trigger: GTTGTGACTGTGACAGACTCACTGGGGTTTGTACAT...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000579208.5
CDS-3UTR TCA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGCCCCGTACTCTTGCATaGTCTTTATCATCTCACACA +
Preference number: 4 (lower is better)
Translates to: AGANLETFMIQTPLFRNGPRTLA*SLSSHT
Trigger: TGTGTGAGATGATAAAGATCATGCAAGAGTACGGGG...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGTCCCTGAGGGCATCTTaGATTTGGTCAATGATCCCT +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWSLRAS*IWSMIP
Trigger: AGGGATCATTGACCAAATCCAAGATGCCCTCAGGGA...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGAGGCAAGAAAGGAACTaGATGACCACAAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWRQERN*MTTRVS
Trigger: GCTGACTCTTGTGGTCATCCAGTTCCTTTCTTGCCT...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCAGTGCTGGGTCTTCTTaGGAATGGACTGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVSAGSS*EWTGGF
Trigger: AAAACCTCCAGTCCATTCCCAAGAAGACCCAGCACT...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTCAAACACCTTGCTTTTaGGCTCATCCTCCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSQTPCF*AHPPKR
Trigger: TCTCTTTGGAGGATGAGCTCAAAAGCAAGGTGTTTG...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR TCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGCAAACACCTTGCTTTTaGGCTCATCCTCCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWQTPCF*AHPPKR
Trigger: TCTCTTTGGAGGATGAGCTCAAAAGCAAGGTGTTTG...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGTTGGTGCGATGCACATaGGTGATGGAAATGAAGACA +
Preference number: 4 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWLVRCT*VMEMKT
Trigger: TGTCTTCATTTCCATCACCCATGTGCATCGCACCAA...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CCA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGTTGGTGCGATGCACATaGGTGATGGAAATGAAGACA +
Preference number: 4 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWLVRCT*VMEMKT
Trigger: TGTCTTCATTTCCATCACCCATGTGCATCGCACCAA...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR GCA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTACCTCCCCGTACTCTTaGATGATCTTTATCATCTCA +
Preference number: 4 (lower is better)
Translates to: GANLETFMIQTPLFRNGSTSPYS*MIFIIS
Trigger: TGAGATGATAAAGATCATGCAAGAGTACGGGGAGGT...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS CCA 90 bp GGCCAGGCTGGCCAGGGAGGCCAGGACAGCCTGTGGCCGAGGGTGTaGCTGCCCCGTGCCACCCCCTCCCGTCACCTTGCTGGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GQAGQGGQDSLWPRV*LPRATPSRHLAGLF
Trigger: GAAGAGCCCAGCAAGGTGACGGGAGGGGGTGGCACGGGGCAGCCACACCCTCGGCCACAGGCTGTCCTGGCCTCCCTGGCCAGCCTGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579241.1
CDS TCA 90 bp CTCCTTCAGGACGCTGAGGGCCTTCCGCGTGGACAGGCCCAGGGCTaGGGGAGGCTCGCCCTGCAGGCAAGCAGGAGGCGCTGGGCGTCA +
Preference number: 5 (lower is better)
Translates to: LLQDAEGLPRGQAQG*GRLALQASRRRWAS
Trigger: TGACGCCCAGCGCCTCCTGCTTGCCTGCAGGGCGAGCCTCCCTCAGCCCTGGGCCTGTCCACGCGGAAGGCCCTCAGCGTCCTGAAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584383.1
CDS-3UTR CAA 90 bp GCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAAGGGGAGGCCGCCGCTaGGTGACACAGGAGAGCCGC +
Preference number: 5 (lower is better)
Translates to: ASLCQPPPGVGRPWSGLTRGGRR*VTQESR
Trigger: GCGGCTCTCCTGTGTCACCAAGCGGCGGCCTCCCCT...TGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS GCA 90 bp AGGCTGGCCAGGGAGGCCAGGACAGCCTGTGGCCGAGGGTGTGGCTaGCCCGTGCCACCCCCTCCCGTCACCTTGCTGGGCTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RLAREARTACGRGCG*PVPPPPVTLLGSSS
Trigger: TGAAGAAGAGCCCAGCAAGGTGACGGGAGGGGGTGGCACGGGGCAGCCACACCCTCGGCCACAGGCTGTCCTGGCCTCCCTGGCCAGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579241.1
CDS-3UTR CAA 90 bp AAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGCCCTCCACGGCAGCCTaGGGAGTTGGACGCGTCGGC +
Preference number: 5 (lower is better)
Translates to: KRGPCSIFRFRRETPPQRPSTAA*GVGRVG
Trigger: GCCGACGCGTCCAACTCCCAAGGCTGCCGTGGAGGG...CCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS TCA 90 bp GCTGTCCCCCGCAGCAGCCCAGCAGCAGCAGCACGGCCAGTAGCATaGGTGAGGCCCCCGGCCAGTGGAAGCAGGAGCAGCGGTTACTGT +
Preference number: 5 (lower is better)
Translates to: AVPRSSPAAAARPVA*VRPPASGSRSSGYC
Trigger: ACAGTAACCGCTGCTCCTGCTTCCACTGGCCGGGGGCCTCACTCATGCTACTGGCCGTGCTGCTGCTGCTGGGCTGCTGCGGGGGACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577380.5
ENST00000579707.1
ENST00000581085.5
ENST00000581519.5
ENST00000582186.5
ENST00000584383.1
ENST00000585105.5
CDS GCA 90 bp AGGCCCCAGGGCACATGGACGGGCAGCACGGCGCTGTGGCTCTCTTaGAGGGCGATGTTGCACAGGTGGTCGGAGAATCGGCACAGGCGC +
Preference number: 5 (lower is better)
Translates to: RPQGTWTGSTALWLS*RAMLHRWSENRHRR
Trigger: GCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGTGCTGCCCGTCCATGTGCCCTGGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578624.1
ENST00000578853.1
ENST00000579208.5
ENST00000581085.5
ENST00000583071.1
ENST00000583296.1
ENST00000585105.5
CDS CCA 90 bp GCTTTGCTTGCATCTGGCGCTGGGCAGCGGGCAGGGGCCGCATCGTaGCATGCTAGGAACCAGGAGACCTGGGCTCCAGGGGTGTGCGGT +
Preference number: 5 (lower is better)
Translates to: ALLASGAGQRAGAAS*HARNQETWAPGVCG
Trigger: ACCGCACACCCCTGGAGCCCAGGTCTCCTGGTTCCTAGCATGCCACGATGCGGCCCCTGCCCGCTGCCCAGCGCCAGATGCAAGCAAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581834.1
ENST00000582455.5
CDS CCA 90 bp ACAGGAACAAGGCCGAGGCATTCACCAGCCCCACCCCACGGCTGGTaGGAGGAAAGAGAGGCCGCACCCACAGGGAGTGAGGGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: TGTRPRHSPAPPHGW*EEREAAPTGSEGSP
Trigger: GGGCGAGCCCTCACTCCCTGTGGGTGCGGCCTCTCTTTCCTCCCACCAGCCGTGGGGTGGGGCTGGTGAATGCCTCGGCCTTGTTCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585105.5
CDS-3UTR CAA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGCGGCGGGCGTTCTGCTaGATGGGGATGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWRRAFC*MGMVLG
Trigger: GCCCAGCACCATCCCCATCAAGCAGAACGCCCGCCG...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp CTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGGGCAGCTTGGCCCGGTaGGAGTCCTCCAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LCQPPPGVGRPWSGLTDQGSLAR*ESSRKL
Trigger: CAGCTTCCTGGAGGACTCCAACCGGGCCAAGCTGCC...CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS CCA 90 bp CAGCGGGCAGGGGCCGCATCGTGGCATGCTAGGAACCAGGAGACCTaGGCTCCAGGGGTGTGCGGTACAGGAACGAGGGCATTCCACAGG +
Preference number: 5 (lower is better)
Translates to: QRAGAASWHARNQET*APGVCGTGTRAFHR
Trigger: CCTGTGGAATGCCCTCGTTCCTGTACCGCACACCCCTGGAGCCCAGGTCTCCTGGTTCCTAGCATGCCACGATGCGGCCCCTGCCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581834.1
ENST00000582455.5
CDS CCA 90 bp GGTCTGGGGGAAATGTGGAGGAGAGCCTCAGCCCGGGATAGGGTGTaGGGAAGCCAGCACTGGCTCTGCCCACCTCCCAAGGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: GLGEMWRRASARDRV*GSQHWLCPPPKAGE
Trigger: CTCCCCAGCCTTGGGAGGTGGGCAGAGCCAGTGCTGGCTTCCCCACACCCTATCCCGGGCTGAGGCTCTCCTCCACATTTCCCCCAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583296.1
CDS-3UTR CAA 90 bp GCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGAGCCAGATGGGTGTTaGCTGCGGCCATGCGCTTTG +
Preference number: 5 (lower is better)
Translates to: ASLCQPPPGVGRPWSGLTEPDGC*LRPCAL
Trigger: CAAAGCGCATGGCCGCAGCAAACACCCATCTGGCTC...TGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS GCA 90 bp CCCACAGGACTGGGCACCCCACCCTCTTCTCCCACCATGCCCAGGTaGATTGGTCCCAGCCAGGGCGAGGTCGGCTATAGTACACACCCC +
Preference number: 5 (lower is better)
Translates to: PTGLGTPPSSPTMPR*IGPSQGEVGYSTHP
Trigger: GGGGTGTGTACTATAGCCGACCTCGCCCTGGCTGGGACCAATGCACCTGGGCATGGTGGGAGAAGAGGGTGGGGTGCCCAGTCCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579898.5
ENST00000581867.1
CDS GCA 90 bp GCCGGGCCTGGTACGTCAGAGCTCCAGCTGCTGCGGCGGGCGTTCTaGTTGATGGGGATGGTGCTGGGCAGCTCGCACATGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: AGPGTSELQLLRRAF*LMGMVLGSSHMVKM
Trigger: CATCTTCACCATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCAGAACGCCCGCCGCAGCAGCTGGAGCTCTGACGTACCAGGCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585105.5
CDS CCA 90 bp GGCAGCACGGCGCTGTGGCTCTCTTGCAGGGCGATGTTGCACAGGTaGTCGGAGAATCGGCACAGGCGCTCGGTGACGCTGGCATCACAC +
Preference number: 5 (lower is better)
Translates to: GSTALWLSCRAMLHR*SENRHRRSVTLASH
Trigger: GTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGTGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578624.1
ENST00000578853.1
ENST00000579208.5
ENST00000580918.1
ENST00000581085.5
ENST00000583071.1
ENST00000583296.1
ENST00000585105.5
CDS CCA 90 bp CAGCCCAGGAGCCATGTCAGCAGGGGCACGTCCTCCAGGCCAAAGTaGACGTGGCTGTCCCTGTGTGTCCACAGCTGCAGGTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: QPRSHVSRGTSSRPK*TWLSLCVHSCRSTA
Trigger: GGCTGTGGACCTGCAGCTGTGGACACACAGGGACAGCCACGTCCACTTTGGCCTGGAGGACGTGCCCCTGCTGACATGGCTCCTGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000584694.1
ENST00000585105.5
CDS-3UTR CAA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGTTGAGGCCCAGGGGTTaGAGGGAGGTGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWLRPRG*REVRCS
Trigger: GCTGCACCTCACCTCCCTCAAACCCCTGGGCCTCAA...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp CAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGAGGGGAGGCCGCCGCTaGGTGACACAGGAGAGCCGC +
Preference number: 5 (lower is better)
Translates to: QRRLASRPCPGTHEQRHWRGGRR*VTQESR
Trigger: GCGGCTCTCCTGTGTCACCAAGCGGCGGCCTCCCCT...CCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS GCA 90 bp AGTTTAGCCCGCGGTGACACACCAATGAAAGAGCGGGGCTTTGCTTaGATCTGGCGCTGGGCAGCGGGCAGGGGCCGCATCGTGGCATGC +
Preference number: 5 (lower is better)
Translates to: SLARGDTPMKERGFA*IWRWAAGRGRIVAC
Trigger: GCATGCCACGATGCGGCCCCTGCCCGCTGCCCAGCGCCAGATGCAAGCAAAGCCCCGCTCTTTCATTGGTGTGTCACCGCGGGCTAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581834.1
CDS CCA 90 bp AGGAGCCATGTCAGCAGGGGCACGTCCTCCAGGCCAAAGTGGACGTaGCTGTCCCTGTGTGTCCACAGCTGCAGGTCCACAGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: RSHVSRGTSSRPKWT*LSLCVHSCRSTAVW
Trigger: CCAGACGGCTGTGGACCTGCAGCTGTGGACACACAGGGACAGCCACGTCCACTTTGGCCTGGAGGACGTGCCCCTGCTGACATGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000584694.1
ENST00000585105.5
CDS CCA 90 bp TTCGCAGCAGACTTGGGGAGGGCCTCAGGGACCACTGGCCTAGCCTaGAGGTGCTGGGACAGAGGGCAGAGACGCCTGCTCTTTCAGACC +
Preference number: 5 (lower is better)
Translates to: FAADLGRASGTTGLA*RCWDRGQRRLLFQT
Trigger: GGTCTGAAAGAGCAGGCGTCTCTGCCCTCTGTCCCAGCACCTCCAGGCTAGGCCAGTGGTCCCTGAGGCCCTCCCCAAGTCTGCTGCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579241.1
CDS-3UTR CAA 90 bp GAAGGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGCCAGGCATGTCACCATaGGGTGTGAGGGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: EGLGLPLPATAGGGQTLEPGMSP*GVREMW
Trigger: CCACATCTCCCTCACACCCAATGGTGACATGCCTGG...CTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACATACCCCGGGGCAGCTaGGCCCGGTTGGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHIPRGS*ARLESS
Trigger: GGAGGACTCCAACCGGGCCAAGCTGCCCCGGGGTAT...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp TCCCCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGCAGCTGTTCCGCAGGTaGGCAGAGCTGCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SPRLTGSQLEPGTGRGSRQLFRR*AELPRQ
Trigger: CTGCCTGGGCAGCTCTGCCAACCTGCGGAACAGCTG...CCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGCAGCTGTTCCGCAGGTaGGCAGAGCTGCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGQLFRR*AELPRQ
Trigger: CTGCCTGGGCAGCTCTGCCAACCTGCGGAACAGCTG...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACCGGCAGCCTTGGGAGTaGGACGCGTCGGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHRQPWE*DASAKA
Trigger: AGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCG...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS GCA 90 bp TCCCCGATCCCTTCGTCAGAGCTCCAGCTGCTGCGGCGGGCGTTCTaGTTGATGGGGATGGTGCTGGGCAGCTCGCACATGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: SPIPSSELQLLRRAF*LMGMVLGSSHMVKM
Trigger: CATCTTCACCATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCAGAACGCCCGCCGCAGCAGCTGGAGCTCTGACGAAGGGATCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS GCA 90 bp CGAAAGGTCAGGGAACAGGGCAGGCTGTTGAGCTGCCCTGACAGCTaGAGGGGAGAAAGGCCATCCGAGGCCTGGGCCATGCTGATGCTG +
Preference number: 5 (lower is better)
Translates to: RKVREQGRLLSCPDS*RGERPSEAWAMLML
Trigger: CAGCATCAGCATGGCCCAGGCCTCGGATGGCCTTTCTCCCCTGCAGCTGTCAGGGCAGCTCAACAGCCTGCCCTGTTCCCTGACCTTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000585105.5
CDS CCA 90 bp AGCAGCAGCAGCACGGCCAGTAGCATGAGTGAGGCCCCCGGCCAGTaGAAGCAGGAGCAGCGGTTACTGTGGTGGAGGAAGCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SSSSTASSMSEAPGQ*KQEQRLLWWRKLLL
Trigger: GAGAAGCAGCTTCCTCCACCACAGTAACCGCTGCTCCTGCTTCCACTGGCCGGGGGCCTCACTCATGCTACTGGCCGTGCTGCTGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577380.5
ENST00000579707.1
ENST00000581085.5
ENST00000581519.5
ENST00000582186.5
ENST00000584383.1
ENST00000585105.5
CDS CCA 90 bp ACAAGCCCATCAATGAGGCGCACGATGTCCAGCCGGGCCTGGTACTaGGAGGACACCATGCCCATGAAGATCTGGCCGCTCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: TSPSMRRTMSSRAWY*EDTMPMKIWPLRAC
Trigger: GCAGGCCCTGAGCGGCCAGATCTTCATGGGCATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACATCGTGCGCCTCATTGATGGGCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS CCA 90 bp GCTGATGCTGGTGGCGTAGCCAAAGGTCTCCCAGGAGCAACGGGATaGGTACAGGGGATCCAGGGCAATGCTGCTCAGGGTGGGGGACAC +
Preference number: 5 (lower is better)
Translates to: ADAGGVAKGLPGATG*VQGIQGNAAQGGGH
Trigger: GTGTCCCCCACCCTGAGCAGCATTGCCCTGGATCCCCTGTACCCATCCCGTTGCTCCTGGGAGACCTTTGGCTACGCCACCAGCATCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579898.5
ENST00000581867.1
CDS-3UTR CAA 90 bp GGCCAGGACACGGGCCTCTCCACAGGCAGTTGCCAGAACCCAGAGGACTGGAAAACGCTTCAGCCGGTCTaGCCGCCCGATGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: GQDTGLSTGSCQNPEDWKTLQPV*PPDEHK
Trigger: CTTGTGCTCATCGGGCGGCAAGACCGGCTGAAGCGT...TTTCCAGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGGCCCGTGTCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR CAA 90 bp GGTTTAGGCCTCCCTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGGAGGGCATCTTGGATTaGGTCAATGATCCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: GLGLPLPATAGGGQTLEWEGILD*VNDPSQ
Trigger: CTGCGAGGGATCATTGACCAAATCCAAGATGCCCTC...CCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp CCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGCGCCTCTCCACAGGCAGTaGCCAGAACCCAGAGGACTG +
Preference number: 5 (lower is better)
Translates to: PRLTGSQLEPGTGRGSRAPLHRQ*PEPRGL
Trigger: CAGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGG...CGCCCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp AAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGGACAGGATCCCCTGTTaGTCCACACAGCACAGGACC +
Preference number: 5 (lower is better)
Translates to: KRGPCSIFRFRRETPPQRDRIPC*STQHRT
Trigger: GGTCCTGTGCTGTGTGGACAAACAGGGGATCCTGTC...CCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp ACGGCGCTGTGGCTCTCTTGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCGGTTGAGGCCCAGGGGTTaGAGGGAGGTGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: TALWLSCRAMLHRWSENRLRPRG*REVRCS
Trigger: GCTGCACCTCACCTCCCTCAAACCCCTGGGCCTCAA...CCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CAA 90 bp CTTTGCCAGCCACCGCCGGGGGTGGGCAGACCCTGGAGTGGCCTTACAGACCAGTGCTTGAAAAGCTCCTaGGCCCCAGGAGTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LCQPPPGVGRPWSGLTDQCLKSS*APGVKP
Trigger: TGGCTTCACTCCTGGGGCCAAGGAGCTTTTCAAGCA...CTGGTCTGTAAGGCCACTCCAGGGTCTGCCCACCCCCGGCGGTGGCTGGCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCGGCAGCTTGGCCCGGTaGGAGTCCTCCAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGGSLAR*ESSRKL
Trigger: CAGCTTCCTGGAGGACTCCAACCGGGCCAAGCTGCC...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp TCCCCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGATGACGGAGGAGCAGTaGGTGAGGTTGCGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: SPRLTGSQLEPGTGRGSRMTEEQ*VRLRSR
Trigger: CCGGGACCGCAACCTCACCAACTGCTCCTCCGTCAT...CCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS TCA 90 bp GCTGGGTCTTGCTGGGCTCTTCTTCACCACCCTCGGTGTCCCTGCTaGAGCTCACGTTGGAGCCAGATGGGTGTTTGCTGCGGCCATGCG +
Preference number: 5 (lower is better)
Translates to: AGSCWALLHHPRCPC*SSRWSQMGVCCGHA
Trigger: CGCATGGCCGCAGCAAACACCCATCTGGCTCCAACGTGAGCTTCAGCAGGGACACCGAGGGTGGTGAAGAAGAGCCCAGCAAGACCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000580918.1
ENST00000581085.5
ENST00000585105.5
CDS TCA 90 bp GCACGATGTCCAGCCGGGCCTGGTACTGGGAGGACACCATGCCCATaGAGATCTGGCCGCTCAGGGCCTGCATGCAGTCTTCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: ARCPAGPGTGRTPCP*RSGRSGPACSLPSP
Trigger: TGGAGAAGGAAGACTGCATGCAGGCCCTGAGCGGCCAGATCTTCATGGGCATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACATCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS TCA 90 bp GCAGGAGCTTGCTGGGCTCTTCTTCACCACCCTCGGTGTCCCTGCTaGAGCTCACGTTGGAGCCAGATGGGTGTTTGCTGCGGCCATGCG +
Preference number: 5 (lower is better)
Translates to: AGACWALLHHPRCPC*SSRWSQMGVCCGHA
Trigger: CGCATGGCCGCAGCAAACACCCATCTGGCTCCAACGTGAGCTTCAGCAGGGACACCGAGGGTGGTGAAGAAGAGCCCAGCAAGCTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS GCA 90 bp CTGTATCTCCCACAGGACTGGGCACCCCACCCTCTTCTCCCACCATaGCCAGGTGCATTGGTCCCAGCCAGGGCGAGGTCGGCTATAGTA +
Preference number: 5 (lower is better)
Translates to: LYLPQDWAPHPLLPP*PGALVPARARSAIV
Trigger: TACTATAGCCGACCTCGCCCTGGCTGGGACCAATGCACCTGGGCATGGTGGGAGAAGAGGGTGGGGTGCCCAGTCCTGTGGGAGATACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579898.5
ENST00000581867.1
CDS CCA 90 bp GCGTTGACAAGCCCATCAATGAGGCGCACGATGTCCAGCCGGGCCTaGTACTGGGAGGACACCATGCCCATGAAGATCTGGCCGCTCAGG +
Preference number: 5 (lower is better)
Translates to: ALTSPSMRRTMSSRA*YWEDTMPMKIWPLR
Trigger: CCTGAGCGGCCAGATCTTCATGGGCATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACATCGTGCGCCTCATTGATGGGCTTGTCAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS CCA 90 bp CTGGGGATGTCGCTGTCCGTAGGCTGGAAGCTGATGAGGTCCGAGTaGCCCTCCTCCTCCATGAGGAGGAGCCCTTCTGCATCATCTCGG +
Preference number: 5 (lower is better)
Translates to: LGMSLSVGWKLMRSE*PSSSMRRSPSASSR
Trigger: CCGAGATGATGCAGAAGGGCTCCTCCTCATGGAGGAGGAGGGCCACTCGGACCTCATCAGCTTCCAGCCTACGGACAGCGACATCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000581723.5
ENST00000581867.1
ENST00000585105.5
CDS CCA 90 bp CCTGACCCAGCAGCACCACAGGCACTGTCACGGCCCACCAGAGGTTaGTCAAGGGGCTCTTTCTCCACAGGGGCTTGGTGCGATGCACAT +
Preference number: 5 (lower is better)
Translates to: PDPAAPQALSRPTRG*SRGSFSTGAWCDAH
Trigger: ATGTGCATCGCACCAAGCCCCTGTGGAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCGTGACAGTGCCTGTGGTGCTGCTGGGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000584694.1
ENST00000585105.5
CDS CCA 90 bp TGCCCTGGCAATACCCTGCCAGGTCCATTAAGTCCCGTGAGGAGTTaGTACTGGGCCTCTTCTAGGAGGCGGGTCCAGCCAGCCATCCCC +
Preference number: 5 (lower is better)
Translates to: CPGNTLPGPLSPVRS*YWASSRRRVQPAIP
Trigger: GGGGATGGCTGGCTGGACCCGCCTCCTAGAAGAGGCCCAGTACCAACTCCTCACGGGACTTAATGGACCTGGCAGGGTATTGCCAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578624.1
ENST00000583071.1
CDS CCA 90 bp CAGGGCTCACTGGTGGTGGTGTCTTTAATGAAGAGGCTGATCATGTaGCTGAGGGGAGGCCGCCGCTTGGTGACACAGGAGAGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: QGSLVVVSLMKRLIM*LRGGRRLVTQESRP
Trigger: GGGGCGGCTCTCCTGTGTCACCAAGCGGCGGCCTCCCCTCAGCCACATGATCAGCCTCTTCATTAAAGACACCACCACCAGTGAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS-3UTR CAA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACACGCTTCAGCCGGTCTaGCCGCCCGATGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHTLQPV*PPDEHK
Trigger: CTTGTGCTCATCGGGCGGCAAGACCGGCTGAAGCGT...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp CGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGACTGCTGAAGCTCACGTaGGAGCCAGATGGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: RSGGPAPSSGSGGRLPHRLLKLT*EPDGCL
Trigger: CAAACACCCATCTGGCTCCAACGTGAGCTTCAGCAG...TCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp CGAAGCGGGGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAACTAGCAGGGGCACGTaGTCAATGTTCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RSGGPAPSSGSGGRLPHRTSRGT*SMFCRW
Trigger: CCACCTGCAGAACATTGACAACGTGCCCCTGCTAGT...TCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCCCCGCTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp GGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGGAGGGAGCCGACAGCAGTCCATaGGCAAAGTCCTCAAACCAG +
Preference number: 5 (lower is better)
Translates to: GPCSIFRFRRETPPQREGADSSP*AKSSNQ
Trigger: CTGGTTTGAGGACTTTGCCAATGGACTGCTGTCGGC...TCCCTCCCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGGCCGACAGCAGTCCATaGGCAAAGTCCTCAAACCAG +
Preference number: 5 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWADSSP*AKSSNQ
Trigger: CTGGTTTGAGGACTTTGCCAATGGACTGCTGTCGGC...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGGAGGGACTCCTCCAAAGAAGGTaGGCTTCAAGGCCGTGTCCA +
Preference number: 5 (lower is better)
Translates to: GPCSIFRFRRETPPQREGLLQRR*ASRPCP
Trigger: TGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGAG...TCCCTCCCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp TCCACGGCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTGCTCCCCAAGGCTGCTGCTGTaGCTCCTCCAAAGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: STAALGVGRVGQGCCCCSPRLLL*LLQRRL
Trigger: CAACCTTCTTTGGAGGAGCAACAGCAGCAGCCTTGG...GGAGCAACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS TCA 90 bp CCCAGGGAGCCCTCTCACCAGTGTGCAGGACAATCAGGGCGGCCGTaGGCTTCTGAGCCGACAGCAGTCCATTGGCAAAGTCCTCAAACC +
Preference number: 5 (lower is better)
Translates to: PREPSHQCAGQSGRP*ASEPTAVHWQSPQT
Trigger: GGTTTGAGGACTTTGCCAATGGACTGCTGTCGGCTCAGAAGCTCACGGCCGCCCTGATTGTCCTGCACACTGGTGAGAGGGCTCCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577194.1
ENST00000579898.5
CDS GCA 90 bp CCCAGGAGTGAAGCCTGCAGGGCGGGGAACAGGAACTTAGGGCCATaGCCTGGCAATACCCTGCCAGGTCCATTAAGTCCCGTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: PRSEACRAGNRNLGP*PGNTLPGPLSPVRS
Trigger: ACTCCTCACGGGACTTAATGGACCTGGCAGGGTATTGCCAGGGCATGGCCCTAAGTTCCTGTTCCCCGCCCTGCAGGCTTCACTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578624.1
CDS GCA 90 bp GAGTCTGTCACAGTCACAACATCAATGAAAGAGCGGGGCTTTGCTTaGATCTGGCGCTGGGCAGCGGGCAGGGGCCGCATCGTGGCATGC +
Preference number: 5 (lower is better)
Translates to: ESVTVTTSMKERGFA*IWRWAAGRGRIVAC
Trigger: GCATGCCACGATGCGGCCCCTGCCCGCTGCCCAGCGCCAGATGCAAGCAAAGCCCCGCTCTTTCATTGATGTTGTGACTGTGACAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582455.5
CDS CCA 90 bp GGCCCAGTGCAAGGACCAGGATGGCGCAAAAGGCATGTGGAGGTCTaGATACATGGCACTGGGCCACTGGATCTCCCTGCCATCCCTGAG +
Preference number: 5 (lower is better)
Translates to: GPVQGPGWRKRHVEV*IHGTGPLDLPAIPE
Trigger: CTCAGGGATGGCAGGGAGATCCAGTGGCCCAGTGCCATGTATCCAGACCTCCACATGCCTTTTGCGCCATCCTGGTCCTTGCACTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000581085.5
ENST00000583795.1
ENST00000585105.5
CDS CCA 90 bp GGCAATACCCTGCCAGGTCCATTAAGTCCCGTGAGGAGTTGGTACTaGGCCTCTTCTAGGAGGCGGGTCCAGCCAGCCATCCCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: GNTLPGPLSPVRSWY*ASSRRRVQPAIPCH
Trigger: ATGGCAGGGGATGGCTGGCTGGACCCGCCTCCTAGAAGAGGCCCAGTACCAACTCCTCACGGGACTTAATGGACCTGGCAGGGTATTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578624.1
ENST00000583071.1
CDS CCA 90 bp CTTCCCAGTACAACAGTTAGCTCAGGCAGGGTACAGTTAAACCACTaGCCCCGGTCCCGCCCTCCGATCCTAGCCCTGCAGAAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LPSTTVSSGRVQLNH*PRSRPPILALQKAL
Trigger: GAGGGCCTTCTGCAGGGCTAGGATCGGAGGGCGGGACCGGGGCCAGTGGTTTAACTGTACCCTGCCTGAGCTAACTGTTGTACTGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581453.1
CDS-3UTR CAA 90 bp CCCTCAGGAAGTGGCCCCAAATGCAGCGCAGCATTTCCTGAGAGGAGACAGCCTGAGCTGGGTGAGGCCTaGCTCATCTGGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: PSGSGPKCSAAFPERRQPELGEA*LIWART
Trigger: TGTCCTGGCCCAGATGAGCAAGGCCTCACCCAGCTC...AGGCTGTCTCCTCTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCCTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR CAA 90 bp TTGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACCCACGCTCCTGCTCATaGGAAAGGTGCAGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LQGDVAQVVGESAQALGDPRSCS*ERCRVL
Trigger: CAACACCCTGCACCTTTCCAATGAGCAGGAGCGTGG...GTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CAA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGAGGTGCAGCTGCCAGTaGGAGTCATCAAACTGGATG +
Preference number: 5 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWRCSCQ*ESSNWM
Trigger: CATCCAGTTTGATGACTCCAACTGGCAGCTGCACCT...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGAGGTTCAGCAGCACATaGAGGCCCAGGGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGRFSST*RPRGLR
Trigger: CCTCAAACCCCTGGGCCTCAATGTGCTGCTGAACCT...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACGGCGCTGTGGCTCTCTaGCAGGGCGATGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHGAVAL*QGDVAQ
Trigger: CTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCC...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GGGCCCTGCTCCATCTTCAGGTTCAGGCGGGAGACTCCCCCACAGAGGGAGGGAAGATGGTTCTCCTGCTaGAAAAGCTCCTTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GPCSIFRFRRETPPQREGRWFSC*KSSLAP
Trigger: TGGGGCCAAGGAGCTTTTCAAGCAGGAGAACCATCT...TCCCTCCCTCTGTGGGGGAGTCTCCCGCCTGAACCTGAAGATGGAGCAGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACGCGATGTCTCCTTCATaGTCTCGGCACTGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHAMSPS*SRHWGG
Trigger: GCCTCCCCAGTGCCGAGACAATGAAGGAGACATCGC...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGTTTCTCCACAGGGGCTaGGTGCGATGCACATGGGTG +
Preference number: 5 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGFLHRG*VRCTWV
Trigger: CACCCATGTGCATCGCACCAAGCCCCTGTGGAGAAA...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACACGGCCCACCAGAGGTaGGTCAAGGGGCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHTAHQR*VKGLFL
Trigger: GAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCGT...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp CAGGGCGATGTTGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACGCTCGCTTCCTGTCCTTCTaGGGCTCCTGTCTGCTTCTA +
Preference number: 5 (lower is better)
Translates to: QGDVAQVVGESAQALGDARFLSF*GSCLLL
Trigger: TAGAAGCAGACAGGAGCCCAAGAAGGACAGGAAGCG...AGCGTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS TCA 90 bp TGCTGCTTTGGCCGGGCACCTGTACCAGCTCGATGCACTTGCCATTaGGCTGAGAGGACAGGGCGCAGTTCATGGGCTTGTAGGCGAAGG +
Preference number: 5 (lower is better)
Translates to: CCFGRAPVPARCTCH*AERTGRSSWACRRR
Trigger: CCTTCGCCTACAAGCCCATGAACTGCGCCCTGTCCTCTCAGCTCAATGGCAAGTGCATCGAGCTGGTACAGGTGCCCGGCCAAAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000585105.5
CDS TCA 90 bp GCCCTCTCACCAGTGTGCAGGACAATCAGGGCGGCCGTGAGCTTCTaGGCCGACAGCAGTCCATTGGCAAAGTCCTCAAACCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: ALSPVCRTIRAAVSF*ADSSPLAKSSNQAG
Trigger: TCCAGCCTGGTTTGAGGACTTTGCCAATGGACTGCTGTCGGCTCAGAAGCTCACGGCCGCCCTGATTGTCCTGCACACTGGTGAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577194.1
ENST00000579898.5
CDS GCA 90 bp GGACAGGCTCAGCATCTCCAGGTGGTAGTCACACACAAAGTCCTCTaGTTCGTAGGGGTCGCTCTCCATCCCAGGCTGGGTCTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GQAQHLQVVVTHKVL*FVGVALHPRLGLAG
Trigger: CCCAGCAAGACCCAGCCTGGGATGGAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGTGACTACCACCTGGAGATGCTGAGCCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000580918.1
ENST00000581085.5
ENST00000585105.5
CDS GCA 90 bp TACTGGGAGGACACCATGCCCATGAAGATCTGGCCGCTCAGGGCCTaGATGCAGTCTTCCTTCTCCAGCACCTCCCCGATCCCTTCGTCA +
Preference number: 5 (lower is better)
Translates to: YWEDTMPMKIWPLRA*MQSSFSSTSPIPSS
Trigger: TGACGAAGGGATCGGGGAGGTGCTGGAGAAGGAAGACTGCATGCAGGCCCTGAGCGGCCAGATCTTCATGGGCATGGTGTCCTCCCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS GCA 90 bp GGACAGGCTCAGCATCTCCAGGTGGTAGTCACACACAAAGTCCTCTaGTTCGTAGGGGTCGCTCTCCATCCCAGGCTGGGTGTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: GQAQHLQVVVTHKVL*FVGVALHPRLGVGA
Trigger: GGCTCCAACACCCAGCCTGGGATGGAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGTGACTACCACCTGGAGATGCTGAGCCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578853.1
CDS GCA 90 bp CCACAAGATTCCCCAGCTGATCCCAGCCCAGGTTCCTTTACTCCCTaGATGGGAAACCTACATCCCTCCAGAGCCCACGGGGTACGCAGG +
Preference number: 5 (lower is better)
Translates to: PQDSPADPSPGSFTP*MGNLHPSRAHGVRR
Trigger: CCTGCGTACCCCGTGGGCTCTGGAGGGATGTAGGTTTCCCATGCAGGGAGTAAAGGAACCTGGGCTGGGATCAGCTGGGGAATCTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579898.5
CDS GCA 90 bp GGACAGGCTCAGCATCTCCAGGTGGTAGTCACACACAAAGTCCTCTaGTTCGTAGGGGTCGCTCTCCATCCCAGGCTGGGTCTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: GQAQHLQVVVTHKVL*FVGVALHPRLGLGE
Trigger: TTCCCCCAGACCCAGCCTGGGATGGAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGTGACTACCACCTGGAGATGCTGAGCCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583296.1
CDS CCA 90 bp GCTGATGCTGGTGGCGTAGCCAAAGGTCTCCCAGGAGCAACGGGATaGGTACAGGGGATCCAGGGCAATGCTGATGTCGCTCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: ADAGGVAKGLPGATG*VQGIQGNADVALEE
Trigger: TTCCTCCAGAGCGACATCAGCATTGCCCTGGATCCCCTGTACCCATCCCGTTGCTCCTGGGAGACCTTTGGCTACGCCACCAGCATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000581723.5
ENST00000585105.5
CDS CCA 90 bp TGCCGAGCCTGTTCGATAAGCCGGATGATGCTGATGGTCTCCTCCTaGCGAAAGGTCAGGGAACAGGGCAGGCTGTTGAGCTGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: CRACSISRMMLMVSS*RKVREQGRLLSCPD
Trigger: GTCAGGGCAGCTCAACAGCCTGCCCTGTTCCCTGACCTTTCGCCAGGAGGAGACCATCAGCATCATCCGGCTTATCGAACAGGCTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000585105.5
CDS CCA 90 bp AAGATTCCCCAGCTGATCCCAGCCCAGGTTCCTTTACTCCCTGCATaGGAAACCTACATCCCTCCAGAGCCCACGGGGTACGCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: KIPQLIPAQVPLLPA*ETYIPPEPTGYAGP
Trigger: TGGGCCTGCGTACCCCGTGGGCTCTGGAGGGATGTAGGTTTCCCATGCAGGGAGTAAAGGAACCTGGGCTGGGATCAGCTGGGGAATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579898.5
CDS CCA 90 bp CATCACCGACTGCACTGTGAACCGCTCATTGTCCAGGGCAGTGACTaGTCGGGACAGGGCCATGTCCAGGCACCATCAGGTGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: HHRLHCEPLIVQGSD*SGQGHVQAPSGASP
Trigger: AGGAGAAGCACCTGATGGTGCCTGGACATGGCCCTGTCCCGACCAGTCACTGCCCTGGACAATGAGCGGTTCACAGTGCAGTCGGTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580416.5
CDS-3UTR CAA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGAGCTGGGTGAGGCCTaGCTCATCTGGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHELGEA*LIWART
Trigger: TGTCCTGGCCCAGATGAGCAAGGCCTCACCCAGCTC...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTCTCTGGGCTGGGATTaGGCCATGACAGGATCCCCT +
Preference number: 5 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHSLGWD*AMTGSP
Trigger: AGGGGATCCTGTCATGGCCAAATCCCAGCCCAGAGA...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCCCACGCTCCTGCTCATaGGAAAGGTGCAGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGPRSCS*ERCRVL
Trigger: CAACACCCTGCACCTTTCCAATGAGCAGGAGCGTGG...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp CACCCGCTCCCTCCTGAAATCCGCTTCCTGTCCTTCTTGGGCTCCTGTCTGCTTGAGCCAGATGGGTGTTaGCTGCGGCCATGCGCTTTG +
Preference number: 5 (lower is better)
Translates to: HPLPPEIRFLSFLGSCLLEPDGC*LRPCAL
Trigger: CAAAGCGCATGGCCGCAGCAAACACCCATCTGGCTC...AAGCAGACAGGAGCCCAAGAAGGACAGGAAGCGGATTTCAGGAGGGAGCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CAA 90 bp GCACGGCGCTGTGGCTCTCTTGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCCTGCTGAAGCTCACGTaGGAGCCAGATGGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: ARRCGSLAGRCCTGGRRILLKLT*EPDGCL
Trigger: CAAACACCCATCTGGCTCCAACGTGAGCTTCAGCAG...GATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CAA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACATCCCAGGCTGGGTCTaGCTGGGCTCTTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHIPGWV*LGSSSP
Trigger: TGGTGAAGAAGAGCCCAGCAAGACCCAGCCTGGGAT...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp TTGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACTCTTGCAGGGCGATGTaGCACAGGTGGTCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: LQGDVAQVVGESAQALGDSCRAM*HRWSEN
Trigger: ATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGA...GTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CAA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGGCGCTGTGGCTCTCTaGCAGGGCGATGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHGAVAL*QGDVAQ
Trigger: CTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCC...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GGTGGTAGTCACACACAAAGTCCTCTGCTTCGTAGGGGTCGCTCTCCATCCCAGGGCGCTGTGGCTCTCTaGCAGGGCGATGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: GGSHTQSPLLRRGRSPSQGAVAL*QGDVAQ
Trigger: CTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCC...CTGGGATGGAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGTGACTACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CAA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGTGCTTGAAAAGCTCCTaGGCCCCAGGAGTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGCLKSS*APGVKP
Trigger: TGGCTTCACTCCTGGGGCCAAGGAGCTTTTCAAGCA...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp AAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGGAAGCGGATGCAGGCGTaGACAAGCCCATCAATGAGG +
Preference number: 5 (lower is better)
Translates to: KKVGFKAVSRDPRAEALGKRMQA*TSPSMR
Trigger: CCTCATTGATGGGCTTGTCAACGCCTGCATCCGCTT...CCCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp TTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGGACCACAGCAGGAGCAGTTGGTGAGGTaGCGGTCCCGGGAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: FYQLPERTQWGRGFGPQQEQLVR*RSRELS
Trigger: TGACAGCTCCCGGGACCGCAACCTCACCAACTGCTC...CTGCTGTGGTCCGAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACACGGCCCACCAGAGGTaGGTCAAGGGGCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHTAHQR*VKGLFL
Trigger: GAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCGT...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp CCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGCGAGCTTCACGATCTCATaGGTCACCACCACAAGGACC +
Preference number: 5 (lower is better)
Translates to: PRLTGSQLEPGTGRGSRASFTIS*VTTTRT
Trigger: GGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGCT...CGCCCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp TCGGCACAGGCGCTCGGTGACGCTGGCATCACACAGGTTCAGCAGCACATTGAGGACACTGGCAGGAGCTaGCTGGGCTCTTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: SAQALGDAGITQVQQHIEDTGRS*LGSSSP
Trigger: TGGTGAAGAAGAGCCCAGCAAGCTCCTGCCAGTGTC...CTCAATGTGCTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS CCA 90 bp GTTGACCAGGTGTCCGTCTCTGTAGGCCCAGTGCAAGGACCAGGATaGCGCAAAAGGCATGTGGAGGTCTGGATACATGGCACTGGGCCA +
Preference number: 5 (lower is better)
Translates to: VDQVSVSVGPVQGPG*RKRHVEVWIHGTGP
Trigger: TGGCCCAGTGCCATGTATCCAGACCTCCACATGCCTTTTGCGCCATCCTGGTCCTTGCACTGGGCCTACAGAGACGGACACCTGGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000581085.5
ENST00000583795.1
ENST00000585105.5
CDS CCA 90 bp GGTAGCGGACTCGGACCCGAATCTCATGTAGCTTCACGATCTCATTaGTCACCACCACAAGGACCAGGGACAGGCAGCCCAGGAGCCATG +
Preference number: 5 (lower is better)
Translates to: GSGLGPESHVASRSH*SPPQGPGTGSPGAM
Trigger: CATGGCTCCTGGGCTGCCTGTCCCTGGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGCTACATGAGATTCGGGTCCGAGTCCGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
CDS-3UTR CAA 90 bp TTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGGACCACAGCAGAGGCTGACTGGCAGGTaGACCAGGTGTCCGTCTCTG +
Preference number: 5 (lower is better)
Translates to: FYQLPERTQWGRGFGPQQRLTGR*TRCPSL
Trigger: CAGAGACGGACACCTGGTCAACCTGCCAGTCAGCCT...CTGCTGTGGTCCGAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp CCAAGACTGACAGGCAGCCAGCTTGAGCCAGGCACAGGAAGAGGCTCCAGGGCGAGGCACCATCTGATGTaGTCAATCACAGGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: PRLTGSQLEPGTGRGSRARHHLM*SITGVS
Trigger: TGAGACCCCTGTGATTGACAACATCAGATGGTGCCT...CGCCCTGGAGCCTCTTCCTGTGCCTGGCTCAAGCTGGCTGCCTGTCAGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGTGAACCGCTCATaGTCCAGGGCAGTGACTGGT +
Preference number: 5 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGTVNRS*SRAVTG
Trigger: ACCAGTCACTGCCCTGGACAATGAGCGGTTCACAGT...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCCACGCTCCTGCTCATaGGAAAGGTGCAGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHPRSCS*ERCRVL
Trigger: CAACACCCTGCACCTTTCCAATGAGCAGGAGCGTGG...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGTCTTGCAGGGCGATGTaGCACAGGTGGTCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGSCRAM*HRWSEN
Trigger: ATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGA...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACAAGCGGATGCAGGCGTaGACAAGCCCATCAATGAGG +
Preference number: 5 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHKRMQA*TSPSMR
Trigger: CCTCATTGATGGGCTTGTCAACGCCTGCATCCGCTT...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGCACCTCCCCGTACTCTaGCATGATCTTTATCATCTC +
Preference number: 5 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWHLPVL*HDLYHL
Trigger: GAGATGATAAAGATCATGCAAGAGTACGGGGAGGTG...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACTTTCTCCACAGGGGCTaGGTGCGATGCACATGGGTG +
Preference number: 5 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHFLHRG*VRCTWV
Trigger: CACCCATGTGCATCGCACCAAGCCCCTGTGGAGAAA...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGCTCCTCCAAAGAAGGTaGGCTTCAAGGCCGTGTCCA +
Preference number: 5 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGLLQRR*ASRPCP
Trigger: TGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGAG...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS GCA 90 bp CAGATCCCGAGAGAGGGTAGATGTCAGCTCCGTCCCAGAAGTCTGTaGAGGCCTCTAAGACCACATCAGCGGTGCCATGGGACAGCATCT +
Preference number: 5 (lower is better)
Translates to: QIPREGRCQLRPRSL*RPLRPHQRCHGTAS
Trigger: AGATGCTGTCCCATGGCACCGCTGATGTGGTCTTAGAGGCCTGCACAGACTTCTGGGACGGAGCTGACATCTACCCTCTCTCGGGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578853.1
ENST00000579208.5
ENST00000581085.5
ENST00000585105.5
CDS GCA 90 bp CTGCCAGAGGAGGAGACTCCCTGGGACTCACGGACAGCAAGGCTCTaGAATGCCACTGGGCTTGGAATGCAGACACCATATTCCCATCCT +
Preference number: 5 (lower is better)
Translates to: LPEEETPWDSRTARL*NATGLGMQTPYSHP
Trigger: AGGATGGGAATATGGTGTCTGCATTCCAAGCCCAGTGGCATTGCAGAGCCTTGCTGTCCGTGAGTCCCAGGGAGTCTCCTCCTCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS CCA 90 bp GCCAGGCCTCAAAGCTATGATGTCTCCTTCAACCAGCAGGCTGACTaGCAGGTTGACCAGGTGTCCGTCTCTGTAGGCCCAGTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: ARPQSYDVSFNQQAD*QVDQVSVSVGPVQG
Trigger: TCCTTGCACTGGGCCTACAGAGACGGACACCTGGTCAACCTGCCAGTCAGCCTGCTGGTTGAAGGAGACATCATAGCTTTGAGGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000581085.5
ENST00000583795.1
ENST00000585105.5
CDS CCA 90 bp CTAGCAATACTCACACCACAGGCACTGTCACGGCCCACCAGAGGTTaGTCAAGGGGCTCTTTCTCCACAGGGGCTTGGTGCGATGCACAT +
Preference number: 5 (lower is better)
Translates to: LAILTPQALSRPTRG*SRGSFSTGAWCDAH
Trigger: ATGTGCATCGCACCAAGCCCCTGTGGAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCGTGACAGTGCCTGTGGTGTGAGTATTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577194.1
ENST00000581453.1
CDS CCA 90 bp GCAATGCCACTGGGCTTGGAATGCAGACACCATATTCCCATCCTTTaGACAATCCCGGCCTCTGCAGCCAACACCATCCCAGCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: AMPLGLECRHHIPIL*TIPASAANTIPALV
Trigger: GACCAGGGCTGGGATGGTGTTGGCTGCAGAGGCCGGGATTGTCCAAAGGATGGGAATATGGTGTCTGCATTCCAAGCCCAGTGGCATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS CCA 90 bp CATCACCGACTGCACTGTGAACCGCTCATTGTCCAGGGCAGTGACTaGTCGGGACAGGGCCATGTCCAGGCACCATCTTGGATTTGGTCA +
Preference number: 5 (lower is better)
Translates to: HHRLHCEPLIVQGSD*SGQGHVQAPSWIWS
Trigger: TGACCAAATCCAAGATGGTGCCTGGACATGGCCCTGTCCCGACCAGTCACTGCCCTGGACAATGAGCGGTTCACAGTGCAGTCGGTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR CAA 90 bp CTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACGAGGGCATCTTGGATTaGGTCAATGATCCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: LQRRLASRPCPGTHEQRHEGILD*VNDPSQ
Trigger: CTGCGAGGGATCATTGACCAAATCCAAGATGCCCTC...GTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp AAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCACTGGGATGTGCTCGTCATCCTaGATCCCCCTCAGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: KEGWLQGRVQGPTSRGTGMCSSS*IPLREA
Trigger: TGCTTCTCTGAGGGGGATCAAGGATGACGAGCACAT...CCCAGTGCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp CAGGAAGTGGCCCCAAATGCAGCGCAGCATTTCCTGAGAGGAGACAGCCTCCGTACTGTGAACCGCTCATaGTCCAGGGCAGTGACTGGT +
Preference number: 5 (lower is better)
Translates to: QEVAPNAAQHFLRGDSLRTVNRS*SRAVTG
Trigger: ACCAGTCACTGCCCTGGACAATGAGCGGTTCACAGT...ACGGAGGCTGTCTCCTCTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR CAA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATATCCCAGGCTGGGTCTaGCTGGGCTCTTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHIPGWV*LGSSSP
Trigger: TGGTGAAGAAGAGCCCAGCAAGACCCAGCCTGGGAT...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp CCAGGTGGTAGTCACACACAAAGTCCTCTGCTTCGTAGGGGTCGCTCTCCATCCAGGTTCAGCAGCACATaGAGGCCCAGGGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: PGGSHTQSPLLRRGRSPSRFSST*RPRGLR
Trigger: CCTCAAACCCCTGGGCCTCAATGTGCTGCTGAACCT...GGATGGAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGTGACTACCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CAA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAGGGGAGGCCGCCGCTaGGTGACACAGGAGAGCCGC +
Preference number: 5 (lower is better)
Translates to: TGAGANLETFMIQTPLFRRGGRR*VTQESR
Trigger: GCGGCTCTCCTGTGTCACCAAGCGGCGGCCTCCCCT...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp TGCCCTCCACGGCAGCCTTGGGAGTTGGACGCGTCGGCCAAGGCTGCTGCTGTTTTTTCTGCAAACACCTaGCTTTTGAGCTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: CPPRQPWELDASAKAAAVFSANT*LLSSSS
Trigger: GGAGGATGAGCTCAAAAGCAAGGTGTTTGCAGAAAA...AACAGCAGCAGCCTTGGCCGACGCGTCCAACTCCCAAGGCTGCCGTGGAGGGCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp GGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACCACAGCCAGTGGTTTTCTGCAAACACCTaGCTTTTGAGCTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: GSGFSPRDGGNYSHHSQWFSANT*LLSSSS
Trigger: GGAGGATGAGCTCAAAAGCAAGGTGTTTGCAGAAAA...CCACTGGCTGTGGTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGGGCAGCTTGGCCCGGTaGGAGTCCTCCAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SATGAGANLETFMIQTPLGSLAR*ESSRKL
Trigger: CAGCTTCCTGGAGGACTCCAACCGGGCCAAGCTGCC...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTATACCCCGGGGCAGCTaGGCCCGGTTGGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVIPRGS*ARLESS
Trigger: GGAGGACTCCAACCGGGCCAAGCTGCCCCGGGGTAT...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp CTGTTCAGAAATGGGTCTGGCTTTAGCCCCAGGGACGGGGGCAACTACAGCCACACTAGCAGGGGCACGTaGTCAATGTTCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LFRNGSGFSPRDGGNYSHTSRGT*SMFCRW
Trigger: CCACCTGCAGAACATTGACAACGTGCCCCTGCTAGT...GTGGCTGTAGTTGCCCCCGTCCCTGGGGCTAAAGCCAGACCCATTTCTGAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp TCCTCCAAAGAAGGTTGGCTTCAAGGCCGTGTCCAGGGACCCACGAGCAGAGGCAGCTTCACGATCTCATaGGTCACCACCACAAGGACC +
Preference number: 5 (lower is better)
Translates to: SSKEGWLQGRVQGPTSRGSFTIS*VTTTRT
Trigger: GGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGCT...GCCTCTGCTCGTGGGTCCCTGGACACGGCCTTGAAGCCAACCTTCTTTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS TCA 90 bp GAGAGAGAGAAGAGGAGAGAAGAGACGGAGACAGCTGAGAGTGTGTaGGCAAGAAGCCGGGTGCTGCACAGAATCAGGCGCAGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: EREKRREETETAESV*ARSRVLHRIRRSRA
Trigger: TGCTCTGCTGCGCCTGATTCTGTGCAGCACCCGGCTTCTTGCTCACACACTCTCAGCTGTCTCCGTCTCTTCTCTCCTCTTCTCTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375248.9
CDS TCA 90 bp GAGCCACCGAAAAACTCAGGAGAGAGGGTGGGATGTAGCAGCACGTaGCCAAGGCAACGCCAAAGTTTAGCCCGCGGTGACACACCAATG +
Preference number: 5 (lower is better)
Translates to: EPPKNSGERVGCSST*PRQRQSLARGDTPM
Trigger: CATTGGTGTGTCACCGCGGGCTAAACTTTGGCGTTGCCTTGGTCACGTGCTGCTACATCCCACCCTCTCTCCTGAGTTTTTCGGTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581834.1
CDS GCA 90 bp AGGTTGGCAGAGCTGCCCAGGCAGCAGGTCACCTCCCCGTACTCTTaGATGATCTTTATCATCTCACACATGGTCTCTGGGGTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: RLAELPRQQVTSPYS*MIFIISHMVSGVQS
Trigger: CGACTGCACCCCAGAGACCATGTGTGAGATGATAAAGATCATGCAAGAGTACGGGGAGGTGACCTGCTGCCTGGGCAGCTCTGCCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000581723.5
ENST00000581867.1
ENST00000585105.5
CDS GCA 90 bp GGGACTCACGGACAGCAAGGCTCTGCAATGCCACTGGGCTTGGAATaGAGACACCATATTCCCATCCTTTGGACAATCCCGGCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: GTHGQQGSAMPLGLE*RHHIPILWTIPASA
Trigger: TGCAGAGGCCGGGATTGTCCAAAGGATGGGAATATGGTGTCTGCATTCCAAGCCCAGTGGCATTGCAGAGCCTTGCTGTCCGTGAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS CCA 90 bp GGCGCAAAAGGCATGTGGAGGTCTGGATACATGGCACTGGGCCACTaGATCTCCCTGCCATCCCTGAGGGCATCTTGGATTTGGTCAATG +
Preference number: 5 (lower is better)
Translates to: GAKGMWRSGYMALGH*ISLPSLRASWIWSM
Trigger: CATTGACCAAATCCAAGATGCCCTCAGGGATGGCAGGGAGATCCAGTGGCCCAGTGCCATGTATCCAGACCTCCACATGCCTTTTGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000581085.5
ENST00000583795.1
ENST00000584383.1
ENST00000585105.5
CDS CCA 90 bp GTAGCAAAAGCAGGACAGCCACAGGATGTCGGTGGTACTCAGGAGTaGCGGCAGCTGGACCAGGCAAGAAAGGAACTGGATGACCACAAG +
Preference number: 5 (lower is better)
Translates to: VAKAGQPQDVGGTQE*RQLDQARKELDDHK
Trigger: CTTGTGGTCATCCAGTTCCTTTCTTGCCTGGTCCAGCTGCCGCCACTCCTGAGTACCACCGACATCCTGTGGCTGTCCTGCTTTTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000581453.1
ENST00000585105.5
CDS CCA 90 bp GAAAGGAACTGTTCGATAAGCCGGATGATGCTGATGGTCTCCTCCTaGCGAAAGGTCAGGGAACAGGGCAGGCTGTTGAGCTGCCCTGAC +
Preference number: 5 (lower is better)
Translates to: ERNCSISRMMLMVSS*RKVREQGRLLSCPD
Trigger: GTCAGGGCAGCTCAACAGCCTGCCCTGTTCCCTGACCTTTCGCCAGGAGGAGACCATCAGCATCATCCGGCTTATCGAACAGTTCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577247.5
CDS CCA 90 bp GTAGCAAAAGCAGGACAGCCACAGGATGTCGGTGGTACTCAGGAGTaGCGGCAGCTGGACCAGGCAAGAAAGGAACTGTTCGATAAGCCG +
Preference number: 5 (lower is better)
Translates to: VAKAGQPQDVGGTQE*RQLDQARKELFDKP
Trigger: CGGCTTATCGAACAGTTCCTTTCTTGCCTGGTCCAGCTGCCGCCACTCCTGAGTACCACCGACATCCTGTGGCTGTCCTGCTTTTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577247.5
CDS-3UTR CAA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGACGGCGGGCGTTCTGCTaGATGGGGATGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TGAGANLETFMIQTPLFRRRAFC*MGMVLG
Trigger: GCCCAGCACCATCCCCATCAAGCAGAACGCCCGCCG...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp CCCTCAGGAAGTGGCCCCAAATGCAGCGCAGCATTTCCTGAGAGGAGACAGCCTGGCACCATCTTGGATTaGGTCAATGATCCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: PSGSGPKCSAAFPERRQPGTILD*VNDPSQ
Trigger: CTGCGAGGGATCATTGACCAAATCCAAGATGGTGCC...AGGCTGTCTCCTCTCAGGAAATGCTGCGCTGCATTTGGGGCCACTTCCTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS-3UTR CAA 90 bp AGCTGGAGGAGGGTGTACTGCCAGGAAGTGACCCCCGGGGCACTGAAGATGAAGTGTCCAGGCACCATCTaGGATTTGGTCAATGATCCC +
Preference number: 5 (lower is better)
Translates to: SWRRVYCQEVTPGALKMKCPGTI*DLVNDP
Trigger: GGGATCATTGACCAAATCCAAGATGGTGCCTGGACA...CTTCATCTTCAGTGCCCCGGGGGTCACTTCCTGGCAGTACACCCTCCTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580441.5
CDS TCA 90 bp CTTCCCGCTGAAGAACAGTACAGTCTCTGGGCTGGGATTTGGCCATaGCAGGATCCCCTGTTTGTCCACACAGCACAGGACCGTGACAGA +
Preference number: 5 (lower is better)
Translates to: LPAEEQYSLWAGIWP*QDPLFVHTAQDRDR
Trigger: TCTGTCACGGTCCTGTGCTGTGTGGACAAACAGGGGATCCTGTCATGGCCAAATCCCAGCCCAGAGACTGTACTGTTCTTCAGCGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000579241.1
ENST00000580918.1
ENST00000581085.5
ENST00000585105.5
CDS TCA 90 bp GAAATGAAGACAGTGTGCAGGACAATCAGGGCGGCCGTGAGCTTCTaGGCCGACAGCAGTCCATTGGCAAAGTCCTCAAACCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: EMKTVCRTIRAAVSF*ADSSPLAKSSNQAG
Trigger: TCCAGCCTGGTTTGAGGACTTTGCCAATGGACTGCTGTCGGCTCAGAAGCTCACGGCCGCCCTGATTGTCCTGCACACTGTCTTCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577245.1
ENST00000577247.5
ENST00000579208.5
ENST00000581085.5
ENST00000581453.1
ENST00000584694.1
ENST00000585105.5
CDS TCA 90 bp TGGCAGAGCTGCCCAGGCAGCAGGTCACCTCCCCGTACTCTTGCATaGTCTTTATCATCTCACACATGGCTGAGGACAGCGTATAAGGGC +
Preference number: 5 (lower is better)
Translates to: WQSCPGSRSPPRTLA*SLSSHTWLRTAYKG
Trigger: GCCCTTATACGCTGTCCTCAGCCATGTGTGAGATGATAAAGATCATGCAAGAGTACGGGGAGGTGACCTGCTGCCTGGGCAGCTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579898.5
CDS GCA 90 bp AGAGGAGGAGACTCCCTGGGACTCACGGACAGCAAGGCTCTGCAATaGCACTGGGCTTGGAATGCAGACACCATATTCCCATCCTTTGGA +
Preference number: 5 (lower is better)
Translates to: RGGDSLGLTDSKALQ*HWAWNADTIFPSFG
Trigger: TCCAAAGGATGGGAATATGGTGTCTGCATTCCAAGCCCAGTGGCATTGCAGAGCCTTGCTGTCCGTGAGTCCCAGGGAGTCTCCTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS CCA 90 bp GGAGACTCCCTGGGACTCACGGACAGCAAGGCTCTGCAATGCCACTaGGCTTGGAATGCAGACACCATATTCCCATCCTTTGGACAATCC +
Preference number: 5 (lower is better)
Translates to: GDSLGLTDSKALQCH*AWNADTIFPSFGQS
Trigger: GGATTGTCCAAAGGATGGGAATATGGTGTCTGCATTCCAAGCCCAGTGGCATTGCAGAGCCTTGCTGTCCGTGAGTCCCAGGGAGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS-3UTR CAA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGGAGCCAGATGGGTGTTaGCTGCGGCCATGCGCTTTG +
Preference number: 5 (lower is better)
Translates to: SATGAGANLETFMIQTPLEPDGC*LRPCAL
Trigger: CAAAGCGCATGGCCGCAGCAAACACCCATCTGGCTC...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp TTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGGACCACAGCAGAGGTGCAGCTGCCAGTaGGAGTCATCAAACTGGATG +
Preference number: 5 (lower is better)
Translates to: FYQLPERTQWGRGFGPQQRCSCQ*ESSNWM
Trigger: CATCCAGTTTGATGACTCCAACTGGCAGCTGCACCT...CTGCTGTGGTCCGAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS-3UTR CAA 90 bp CCAGGTGGTAGTCACACACAAAGTCCTCTGCTTCGTAGGGGTCGCTCTCCATCCAGGTGCAGCTGCCAGTaGGAGTCATCAAACTGGATG +
Preference number: 5 (lower is better)
Translates to: PGGSHTQSPLLRRGRSPSRCSCQ*ESSNWM
Trigger: CATCCAGTTTGATGACTCCAACTGGCAGCTGCACCT...GGATGGAGAGCGACCCCTACGAAGCAGAGGACTTTGTGTGTGACTACCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CAA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTATGACGGAGGAGCAGTaGGTGAGGTTGCGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVMTEEQ*VRLRSR
Trigger: CCGGGACCGCAACCTCACCAACTGCTCCTCCGTCAT...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AAATGGAATTTATTCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGGTTTAGGCCTCCCTTaGCCAGCCACCGCCGGGGGT +
Preference number: 5 (lower is better)
Translates to: KWNLFYQLPERTQWGRGFGLGLP*PATAGG
Trigger: ACCCCCGGCGGTGGCTGGCAAAGGGAGGCCTAAACC...GAAGCCCCTCCCCCATTGTGTCCTCTCAGGCAGTTGATAGAATAAATTCCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314256.12
CDS TCA 90 bp CACCTCCCCGTACTCTTGCATGATCTTTATCATCTCACACATGGCTaGGGACAGCGTATAAGGGCACCAGAGTCAGGCAGGCAGAGCACC +
Preference number: 5 (lower is better)
Translates to: HLPVLLHDLYHLTHG*GQRIRAPESGRQST
Trigger: GGTGCTCTGCCTGCCTGACTCTGGTGCCCTTATACGCTGTCCTCAGCCATGTGTGAGATGATAAAGATCATGCAAGAGTACGGGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579898.5
CDS GCA 90 bp CAGAGGTTGGTCAAGGGGCTCTTTCTCCACAGGGGCTTGGTGCGATaGACATGGGTGATGGAAATGAAGACAGTGTGCAGGACAATCAGG +
Preference number: 5 (lower is better)
Translates to: QRLVKGLFLHRGLVR*TWVMEMKTVCRTIR
Trigger: CCTGATTGTCCTGCACACTGTCTTCATTTCCATCACCCATGTGCATCGCACCAAGCCCCTGTGGAGAAAGAGCCCCTTGACCAACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577245.1
ENST00000577247.5
ENST00000579208.5
ENST00000581085.5
ENST00000581453.1
ENST00000584694.1
ENST00000585105.5
CDS GCA 90 bp AAGAGACGGAGACAGCTGAGAGTGTGTGAGCAAGAAGCCGGGTGCTaGACAGAATCAGGCGCAGCAGAGCAGAGCTTCAATCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: KRRRQLRVCEQEAGC*TESGAAEQSFNLLI
Trigger: AATCAGCAGATTGAAGCTCTGCTCTGCTGCGCCTGATTCTGTGCAGCACCCGGCTTCTTGCTCACACACTCTCAGCTGTCTCCGTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375248.9
CDS CCA 90 bp AGAGGGGTGGCCAGACCAAAGAGGACACAGTTGAGGGATCTTCTGTaGCCAGGGAACATCTCTAAGAGGGAGCTCCGGGCTGTGTATATT +
Preference number: 5 (lower is better)
Translates to: RGVARPKRTQLRDLL*PGNISKRELRAVYI
Trigger: AATATACACAGCCCGGAGCTCCCTCTTAGAGATGTTCCCTGGCCACAGAAGATCCCTCAACTGTGTCCTCTTTGGTCTGGCCACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579241.1
CDS-3UTR CAA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATATCCCTGAGGGCATCTaGGATTTGGTCAATGATCCC +
Preference number: 5 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHIPEGI*DLVNDP
Trigger: GGGATCATTGACCAAATCCAAGATGCCCTCAGGGAT...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGGACAGGATCCCCTGTTaGTCCACACAGCACAGGACC +
Preference number: 5 (lower is better)
Translates to: SATGAGANLETFMIQTPLDRIPC*STQHRT
Trigger: GGTCCTGTGCTGTGTGGACAAACAGGGGATCCTGTC...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCTCTCTGGGCTGGGATTaGGCCATGACAGGATCCCCT +
Preference number: 5 (lower is better)
Translates to: ATGAGANLETFMIQTPLFSLGWD*AMTGSP
Trigger: AGGGGATCCTGTCATGGCCAAATCCCAGCCCAGAGA...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGCCACGCTCCTGCTCATaGGAAAGGTGCAGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: SATGAGANLETFMIQTPLPRSCS*ERCRVL
Trigger: CAACACCCTGCACCTTTCCAATGAGCAGGAGCGTGG...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGAGGTTCAGCAGCACATaGAGGCCCAGGGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: SATGAGANLETFMIQTPLRFSST*RPRGLR
Trigger: CCTCAAACCCCTGGGCCTCAATGTGCTGCTGAACCT...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACGCGATGTCTCCTTCATaGTCTCGGCACTGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNAMSPS*SRHWGG
Trigger: GCCTCCCCAGTGCCGAGACAATGAAGGAGACATCGC...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCCGGCGGGCGTTCTGCTaGATGGGGATGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVRRAFC*MGMVLG
Trigger: GCCCAGCACCATCCCCATCAAGCAGAACGCCCGCCG...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGATACCCCGGGGCAGCTaGGCCCGGTTGGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWIPRGS*ARLESS
Trigger: GGAGGACTCCAACCGGGCCAAGCTGCCCCGGGGTAT...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAGAGCAGTTGGTGAGGTaGCGGTCCCGGGAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: TGAGANLETFMIQTPLFREQLVR*RSRELS
Trigger: TGACAGCTCCCGGGACCGCAACCTCACCAACTGCTC...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS CCA 90 bp ATGTGCTCGTCATCCTTGATCCCCCTCAGAGAAGCAAACGATTCCTaGCCAGGCCTCAAAGCTATGATGTCTCCTTCAACCAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: MCSSSLIPLREANDS*PGLKAMMSPSTSRL
Trigger: CAGCCTGCTGGTTGAAGGAGACATCATAGCTTTGAGGCCTGGCCAGGAATCGTTTGCTTCTCTGAGGGGGATCAAGGATGACGAGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000581085.5
ENST00000583795.1
ENST00000585105.5
CDS-3UTR CAA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCACTGTGAACCGCTCATaGTCCAGGGCAGTGACTGGT +
Preference number: 5 (lower is better)
Translates to: ATGAGANLETFMIQTPLFTVNRS*SRAVTG
Trigger: ACCAGTCACTGCCCTGGACAATGAGCGGTTCACAGT...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGCTGCTGAAGCTCACGTaGGAGCCAGATGGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SATGAGANLETFMIQTPLLLKLT*EPDGCL
Trigger: CAAACACCCATCTGGCTCCAACGTGAGCTTCAGCAG...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTATCCCAGGCTGGGTCTaGCTGGGCTCTTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVIPGWV*LGSSSP
Trigger: TGGTGAAGAAGAGCCCAGCAAGACCCAGCCTGGGAT...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCTCTTGCAGGGCGATGTaGCACAGGTGGTCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: ATGAGANLETFMIQTPLFSCRAM*HRWSEN
Trigger: ATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGA...GAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGAAGCGGATGCAGGCGTaGACAAGCCCATCAATGAGG +
Preference number: 5 (lower is better)
Translates to: SATGAGANLETFMIQTPLKRMQA*TSPSMR
Trigger: CCTCATTGATGGGCTTGTCAACGCCTGCATCCGCTT...CAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACCCAGGCATGTCACCATaGGGTGTGAGGGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNPGMSP*GVREMW
Trigger: CCACATCTCCCTCACACCCAATGGTGACATGCCTGG...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCCAGGCATGTCACCATaGGGTGTGAGGGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVPGMSP*GVREMW
Trigger: CCACATCTCCCTCACACCCAATGGTGACATGCCTGG...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GGGGAGCTGGGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATCACCTCCCCGTACTCTaGCATGATCTTTATCATCTC +
Preference number: 5 (lower is better)
Translates to: GELGFQCHGCRSKPGNIHHLPVL*HDLYHL
Trigger: GAGATGATAAAGATCATGCAAGAGTACGGGGAGGTG...ATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACCCAGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGCAGCTGTTCCGCAGGTaGGCAGAGCTGCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWQLFRR*AELPRQ
Trigger: CTGCCTGGGCAGCTCTGCCAACCTGCGGAACAGCTG...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS GCA 90 bp CCGGGCTGTGTATATTTGGAAGGTTCCAGTAGGGACACCAGTGATTaGGATTACAAGAATGGAAGGGTAGGGGGAGGCTCCACCTACTTC +
Preference number: 5 (lower is better)
Translates to: PGCVYLEGSSRDTSD*DYKNGRVGGGSTYF
Trigger: GAAGTAGGTGGAGCCTCCCCCTACCCTTCCATTCTTGTAATCGCAATCACTGGTGTCCCTACTGGAACCTTCCAAATATACACAGCCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579241.1
CDS-3UTR CAA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCACGCTTCAGCCGGTCTaGCCGCCCGATGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVTLQPV*PPDEHK
Trigger: CTTGTGCTCATCGGGCGGCAAGACCGGCTGAAGCGT...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGAGCTGGGTGAGGCCTaGCTCATCTGGGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWELGEA*LIWART
Trigger: TGTCCTGGCCCAGATGAGCAAGGCCTCACCCAGCTC...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGATCTCTGGGCTGGGATTaGGCCATGACAGGATCCCCT +
Preference number: 5 (lower is better)
Translates to: TGAGANLETFMIQTPLFRSLGWD*AMTGSP
Trigger: AGGGGATCCTGTCATGGCCAAATCCCAGCCCAGAGA...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTTGAGGCCCAGGGGTTaGAGGGAGGTGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVLRPRG*REVRCS
Trigger: GCTGCACCTCACCTCCCTCAAACCCCTGGGCCTCAA...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGGCGCTGTGGCTCTCTaGCAGGGCGATGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWGAVAL*QGDVAQ
Trigger: CTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCC...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGAGCAGTTGGTGAGGTaGCGGTCCCGGGAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: GANLETFMIQTPLFRNGSEQLVR*RSRELS
Trigger: TGACAGCTCCCGGGACCGCAACCTCACCAACTGCTC...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCATGACGGAGGAGCAGTaGGTGAGGTTGCGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVMTEEQ*VRLRSR
Trigger: CCGGGACCGCAACCTCACCAACTGCTCCTCCGTCAT...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGAGGCTGACTGGCAGGTaGACCAGGTGTCCGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWRLTGR*TRCPSL
Trigger: CAGAGACGGACACCTGGTCAACCTGCCAGTCAGCCT...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTCCTCTCCACAGGCAGTaGCCAGAACCCAGAGGACTG +
Preference number: 5 (lower is better)
Translates to: GANLETFMIQTPLFRNGSPLHRQ*PEPRGL
Trigger: CAGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGG...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGGACAGGATCCCCTGTTaGTCCACACAGCACAGGACC +
Preference number: 5 (lower is better)
Translates to: AGANLETFMIQTPLFRNGDRIPC*STQHRT
Trigger: GGTCCTGTGCTGTGTGGACAAACAGGGGATCCTGTC...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCGAGCCAGATGGGTGTTaGCTGCGGCCATGCGCTTTG +
Preference number: 5 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVEPDGC*LRPCAL
Trigger: CAAAGCGCATGGCCGCAGCAAACACCCATCTGGCTC...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGCGATGTCTCCTTCATaGTCTCGGCACTGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GANLETFMIQTPLFRNGSAMSPS*SRHWGG
Trigger: GCCTCCCCAGTGCCGAGACAATGAAGGAGACATCGC...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGACGGCCCACCAGAGGTaGGTCAAGGGGCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWTAHQR*VKGLFL
Trigger: GAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCGT...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp TGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTAGCTTCACGATCTCATaGGTCACCACCACAAGGACC +
Preference number: 5 (lower is better)
Translates to: CHGCRSKPGNIHDTNSPVSFTIS*VTTTRT
Trigger: GGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGCT...AACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS GCA 90 bp TCTGTCACAGTCACAACATCTGGTGCATTCCTTCTTCAGGACCTTTaGAGCAGCTATTCCCACAGCCAGAATGCCCTTCTCCAGGACATT +
Preference number: 5 (lower is better)
Translates to: SVTVTTSGAFLLQDL*SSYSHSQNALLQDI
Trigger: AATGTCCTGGAGAAGGGCATTCTGGCTGTGGGAATAGCTGCTGCAAAGGTCCTGAAGAAGGAATGCACCAGATGTTGTGACTGTGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577380.5
CDS GCA 90 bp CGCTCCCTCCTGAAATCCGCTTCCTGTCCTTCTTGGGCTCCTGTCTaGTTCTATGGACTATTAATATATCTCATGACACTGGCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: RSLLKSASCPSWAPV*FYGLLIYLMTLAGA
Trigger: AGCTCCTGCCAGTGTCATGAGATATATTAATAGTCCATAGAAGCAGACAGGAGCCCAAGAAGGACAGGAAGCGGATTTCAGGAGGGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582843.1
ENST00000583071.1
CDS CCA 90 bp TGGCCAGGGAACATCTCTAAGAGGGAGCTCCGGGCTGTGTATATTTaGAAGGTTCCAGTAGGGACACCAGTGATTGCGATTACAAGAATG +
Preference number: 5 (lower is better)
Translates to: WPGNISKRELRAVYI*KVPVGTPVIAITRM
Trigger: CATTCTTGTAATCGCAATCACTGGTGTCCCTACTGGAACCTTCCAAATATACACAGCCCGGAGCTCCCTCTTAGAGATGTTCCCTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579241.1
CDS CCA 90 bp CCTGAAATCCGCTTCCTGTCCTTCTTGGGCTCCTGTCTGCTTCTATaGACTATTAATATATCTCATGACACTGGCAGGAGCTTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PEIRFLSFLGSCLLL*TINISHDTGRSLLG
Trigger: GCCCAGCAAGCTCCTGCCAGTGTCATGAGATATATTAATAGTCCATAGAAGCAGACAGGAGCCCAAGAAGGACAGGAAGCGGATTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582843.1
CDS-3UTR CAA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACATCCCTGAGGGCATCTaGGATTTGGTCAATGATCCC +
Preference number: 5 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNIPEGI*DLVNDP
Trigger: GGGATCATTGACCAAATCCAAGATGCCCTCAGGGAT...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAGGTGCAGCTGCCAGTaGGAGTCATCAAACTGGATG +
Preference number: 5 (lower is better)
Translates to: TGAGANLETFMIQTPLFRRCSCQ*ESSNWM
Trigger: CATCCAGTTTGATGACTCCAACTGGCAGCTGCACCT...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCAGGTTCAGCAGCACATaGAGGCCCAGGGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVRFSST*RPRGLR
Trigger: CCTCAAACCCCTGGGCCTCAATGTGCTGCTGAACCT...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGACTAGCAGGGGCACGTaGTCAATGTTCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: AGANLETFMIQTPLFRNGTSRGT*SMFCRW
Trigger: CCACCTGCAGAACATTGACAACGTGCCCCTGCTAGT...CCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTTTCTCCACAGGGGCTaGGTGCGATGCACATGGGTG +
Preference number: 5 (lower is better)
Translates to: RSKPGNIHDTNSPVQKWVFLHRG*VRCTWV
Trigger: CACCCATGTGCATCGCACCAAGCCCCTGTGGAGAAA...GACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp ACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAGGCACCATCTGATGTaGTCAATCACAGGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: TGAGANLETFMIQTPLFRRHHLM*SITGVS
Trigger: TGAGACCCCTGTGATTGACAACATCAGATGGTGCCT...TCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314256.12
ENST00000375248.9
CDS-3UTR CAA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGCTGCTGAAGCTCACGTaGGAGCCAGATGGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWLLKLT*EPDGCL
Trigger: CAAACACCCATCTGGCTCCAACGTGAGCTTCAGCAG...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGTCTTGCAGGGCGATGTaGCACAGGTGGTCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWSCRAM*HRWSEN
Trigger: ATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGA...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGTGCTTGAAAAGCTCCTaGGCCCCAGGAGTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWCLKSS*APGVKP
Trigger: TGGCTTCACTCCTGGGGCCAAGGAGCTTTTCAAGCA...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GGTTTCCAGTGCCACGGGTGCAGGAGCAAACCTGGAAACATTCATGATACAAACCACCTCCCCGTACTCTaGCATGATCTTTATCATCTC +
Preference number: 5 (lower is better)
Translates to: GFQCHGCRSKPGNIHDTNHLPVL*HDLYHL
Trigger: GAGATGATAAAGATCATGCAAGAGTACGGGGAGGTG...GTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCACCCGTGGCACTGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGCCGACAGCAGTCCATaGGCAAAGTCCTCAAACCAG +
Preference number: 5 (lower is better)
Translates to: GANLETFMIQTPLFRNGSADSSP*AKSSNQ
Trigger: CTGGTTTGAGGACTTTGCCAATGGACTGCTGTCGGC...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp GGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTAGATGGTTCTCCTGCTaGAAAAGCTCCTTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GANLETFMIQTPLFRNGSRWFSC*KSSLAP
Trigger: TGGGGCCAAGGAGCTTTTCAAGCAGGAGAACCATCT...AGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp TGCAGGAGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGAGATGGTTCTCCTGCTaGAAAAGCTCCTTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: CRSKPGNIHDTNSPVQKWRWFSC*KSSLAP
Trigger: TGGGGCCAAGGAGCTTTTCAAGCAGGAGAACCATCT...CCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS-3UTR CAA 90 bp AGCAAACCTGGAAACATTCATGATACAAACTCCCCTGTTCAGAAATGGGTCTGGTTTTCTGCAAACACCTaGCTTTTGAGCTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: SKPGNIHDTNSPVQKWVWFSANT*LLSSSS
Trigger: GGAGGATGAGCTCAAAAGCAAGGTGTTTGCAGAAAA...CCAGACCCATTTCTGAACAGGGGAGTTTGTATCATGAATGTTTCCAGGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
CDS TCA 72 bp GACGCTGAGGGCCTTCCGCGTGGACAGGCCCAGGGCTaGGGGAGGCTCGCCCTGCAGGCAAGCAGGAGGCGC +
Preference number: 6 (lower is better)
Translates to: DAEGLPRGQAQG*GRLALQASRRR
Trigger: GCGCCTCCTGCTTGCCTGCAGGGCGAGCCTCCCTCAGCCCTGGGCCTGTCCACGCGGAAGGCCCTCAGCGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584383.1
CDS GCA 72 bp AGGGAGGCCAGGACAGCCTGTGGCCGAGGGTGTGGCTaGCCCGTGCCACCCCCTCCCGTCACCTTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: REARTACGRGCG*PVPPPPVTLLG
Trigger: GCCCAGCAAGGTGACGGGAGGGGGTGGCACGGGGCAGCCACACCCTCGGCCACAGGCTGTCCTGGCCTCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579241.1
CDS CAA 90 bp TCTGTCCCAGGTGCCGCGGCAGGATGGACAGCACAGCTGGAGAGGTaGGGGAGCAGCCCCTGGGCGCACACCTCCCGGCTGGCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: SVPGAAAGWTAQLER*GSSPWAHTSRLAVP
Trigger: GGGGACAGCCAGCCGGGAGGTGTGCGCCCAGGGGCTGCTCCCCAACCTCTCCAGCTGTGCTGTCCATCCTGCCGCGGCACCTGGGACAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585105.5
CDS TCA 72 bp GACGCTGAGGGCCTTCCGCGTGGACAGGCCCAGGGCTaGGGGAGGCTCGCCCAGGTGCTTCTCCTTCAGGTC +
Preference number: 6 (lower is better)
Translates to: DAEGLPRGQAQG*GRLAQVLLLQV
Trigger: GACCTGAAGGAGAAGCACCTGGGCGAGCCTCCCTCAGCCCTGGGCCTGTCCACGCGGAAGGCCCTCAGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000577380.5
ENST00000581085.5
ENST00000581519.5
ENST00000582455.5
ENST00000585277.1
CDS TCA 72 bp CGCAGCAGCCCAGCAGCAGCAGCACGGCCAGTAGCATaGGTGAGGCCCCCGGCCAGTGGAAGCAGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: RSSPAAAARPVA*VRPPASGSRSS
Trigger: GCTGCTCCTGCTTCCACTGGCCGGGGGCCTCACTCATGCTACTGGCCGTGCTGCTGCTGCTGGGCTGCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577380.5
ENST00000579707.1
ENST00000581085.5
ENST00000581519.5
ENST00000582186.5
ENST00000584383.1
ENST00000585105.5
CDS CAA 90 bp GAGGCCCCAGGGCACATGGACGGGCAGCACGGCGCTGTGGCTCTCTaGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCGGCACAGGCG +
Preference number: 6 (lower is better)
Translates to: EAPGHMDGQHGAVAL*QGDVAQVVGESAQA
Trigger: CGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGTGCTGCCCGTCCATGTGCCCTGGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578624.1
ENST00000578853.1
ENST00000579208.5
ENST00000581085.5
ENST00000583071.1
ENST00000583296.1
ENST00000585105.5
CDS TCA 72 bp CTTCCAGCACTGCCTCCAGCTGCTCCTTCAGGACGCTaGGGGCCTTCCGCGTGGACAGGCCCAGGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LPALPPAAPSGR*GPSAWTGPGLR
Trigger: CCTCAGCCCTGGGCCTGTCCACGCGGAAGGCCCTCAGCGTCCTGAAGGAGCAGCTGGAGGCAGTGCTGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577380.5
ENST00000579707.1
ENST00000581085.5
ENST00000581519.5
ENST00000582186.5
ENST00000582455.5
ENST00000584383.1
ENST00000585105.5
ENST00000585277.1
CDS GCA 72 bp GCAGCACGGCGCTGTGGCTCTCTTGCAGGGCGATGTTaGACAGGTGGTCGGAGAATCGGCACAGGCGCTCGG +
Preference number: 6 (lower is better)
Translates to: AARRCGSLAGRC*TGGRRIGTGAR
Trigger: CCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578624.1
ENST00000578853.1
ENST00000579208.5
ENST00000580918.1
ENST00000581085.5
ENST00000583071.1
ENST00000583296.1
ENST00000585105.5
CDS CCA 72 bp AGGCAGAGCACCAAGTGGGCACTGGGCAGAGACCCATaGGACAGGAGAGCAGGAGGCGATGGGAGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: RQSTKWALGRDP*DRRAGGDGRWA
Trigger: GGCCCACCTCCCATCGCCTCCTGCTCTCCTGTCCCATGGGTCTCTGCCCAGTGCCCACTTGGTGCTCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579898.5
CDS CAA 72 bp GGCAGCACGGCGCTGTGGCTCTCTTGCAGGGCGATGTaGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCG +
Preference number: 6 (lower is better)
Translates to: GSTALWLSCRAM*HRWSENRHRRS
Trigger: CGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGTGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578624.1
ENST00000578853.1
ENST00000579208.5
ENST00000580918.1
ENST00000581085.5
ENST00000583071.1
ENST00000583296.1
ENST00000585105.5
CDS CAA 90 bp ACATGGACGGGCAGCACGGCGCTGTGGCTCTCTTGCAGGGCGATGTaGCACAGGTGGTCGGAGAATCGGCACAGGCGCTCGGTGACGCTG +
Preference number: 6 (lower is better)
Translates to: TWTGSTALWLSCRAM*HRWSENRHRRSVTL
Trigger: CAGCGTCACCGAGCGCCTGTGCCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGTGCTGCCCGTCCATGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578624.1
ENST00000578853.1
ENST00000579208.5
ENST00000580918.1
ENST00000581085.5
ENST00000583071.1
ENST00000583296.1
ENST00000585105.5
CDS CAA 90 bp CAGGACTGGGCACCCCACCCTCTTCTCCCACCATGCCCAGGTGCATaGGTCCCAGCCAGGGCGAGGTCGGCTATAGTACACACCCCCAGC +
Preference number: 6 (lower is better)
Translates to: QDWAPHPLLPPCPGA*VPARARSAIVHTPS
Trigger: GCTGGGGGTGTGTACTATAGCCGACCTCGCCCTGGCTGGGACCAATGCACCTGGGCATGGTGGGAGAAGAGGGTGGGGTGCCCAGTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579898.5
ENST00000581867.1
CDS GCA 72 bp CCAGGCCAGTCGCCACGCTCCTGCTCATTGGAAAGGTaGAGGGTGTTGTTCAGGGAGCCAGCCAGGAGGGCG +
Preference number: 6 (lower is better)
Translates to: PGQSPRSCSLER*RVLFREPARRA
Trigger: CGCCCTCCTGGCTGGCTCCCTGAACAACACCCTGCACCTTTCCAATGAGCAGGAGCGTGGCGACTGGCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578853.1
ENST00000579208.5
ENST00000579241.1
ENST00000580918.1
ENST00000581085.5
ENST00000582843.1
ENST00000585105.5
CDS GCA 72 bp GGCACATGGACGGGCAGCACGGCGCTGTGGCTCTCTTaGAGGGCGATGTTGCACAGGTGGTCGGAGAATCGG +
Preference number: 6 (lower is better)
Translates to: GTWTGSTALWLS*RAMLHRWSENR
Trigger: CCGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGTGCTGCCCGTCCATGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578624.1
ENST00000578853.1
ENST00000579208.5
ENST00000580918.1
ENST00000581085.5
ENST00000583071.1
ENST00000583296.1
ENST00000585105.5
CDS GCA 72 bp CCTTCGTCAGAGCTCCAGCTGCTGCGGCGGGCGTTCTaGTTGATGGGGATGGTGCTGGGCAGCTCGCACATG +
Preference number: 6 (lower is better)
Translates to: PSSELQLLRRAF*LMGMVLGSSHM
Trigger: CATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCAGAACGCCCGCCGCAGCAGCTGGAGCTCTGACGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS GCA 72 bp GGTACGTCAGAGCTCCAGCTGCTGCGGCGGGCGTTCTaGTTGATGGGGATGGTGCTGGGCAGCTCGCACATG +
Preference number: 6 (lower is better)
Translates to: GTSELQLLRRAF*LMGMVLGSSHM
Trigger: CATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCAGAACGCCCGCCGCAGCAGCTGGAGCTCTGACGTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585105.5
CDS CCA 72 bp GACACACCAATGAAAGAGCGGGGCTTTGCTTGCATCTaGCGCTGGGCAGCGGGCAGGGGCCGCATCGTGGCA +
Preference number: 6 (lower is better)
Translates to: DTPMKERGFACI*RWAAGRGRIVA
Trigger: TGCCACGATGCGGCCCCTGCCCGCTGCCCAGCGCCAGATGCAAGCAAAGCCCCGCTCTTTCATTGGTGTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581834.1
CDS CCA 72 bp GGCGCTGAGGAGCCCCTGCCAGAGGAGGAGACTCCCTaGGACTCACGGACAGCAAGGCTCTGCAATGCCACT +
Preference number: 6 (lower is better)
Translates to: GAEEPLPEEETP*DSRTARLCNAT
Trigger: AGTGGCATTGCAGAGCCTTGCTGTCCGTGAGTCCCAGGGAGTCTCCTCCTCTGGCAGGGGCTCCTCAGCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS CAA 72 bp GGGCACATGGACGGGCAGCACGGCGCTGTGGCTCTCTaGCAGGGCGATGTTGCACAGGTGGTCGGAGAATCG +
Preference number: 6 (lower is better)
Translates to: GHMDGQHGAVAL*QGDVAQVVGES
Trigger: CGATTCTCCGACCACCTGTGCAACATCGCCCTGCAAGAGAGCCACAGCGCCGTGCTGCCCGTCCATGTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578624.1
ENST00000578853.1
ENST00000579208.5
ENST00000580918.1
ENST00000581085.5
ENST00000583071.1
ENST00000583296.1
ENST00000585105.5
CDS CAA 72 bp TCGTCAGAGCTCCAGCTGCTGCGGCGGGCGTTCTGCTaGATGGGGATGGTGCTGGGCAGCTCGCACATGGTG +
Preference number: 6 (lower is better)
Translates to: SSELQLLRRAFC*MGMVLGSSHMV
Trigger: CACCATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCAGAACGCCCGCCGCAGCAGCTGGAGCTCTGACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS CAA 72 bp ACGTCAGAGCTCCAGCTGCTGCGGCGGGCGTTCTGCTaGATGGGGATGGTGCTGGGCAGCTCGCACATGGTG +
Preference number: 6 (lower is better)
Translates to: TSELQLLRRAFC*MGMVLGSSHMV
Trigger: CACCATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCAGAACGCCCGCCGCAGCAGCTGGAGCTCTGACGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585105.5
CDS CAA 90 bp GGGCCTGGTACGTCAGAGCTCCAGCTGCTGCGGCGGGCGTTCTGCTaGATGGGGATGGTGCTGGGCAGCTCGCACATGGTGAAGATGCTG +
Preference number: 6 (lower is better)
Translates to: GPGTSELQLLRRAFC*MGMVLGSSHMVKML
Trigger: CAGCATCTTCACCATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCAGAACGCCCGCCGCAGCAGCTGGAGCTCTGACGTACCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585105.5
CDS TCA 72 bp CCAGCCGGGCCTGGTACTGGGAGGACACCATGCCCATaGAGATCTGGCCGCTCAGGGCCTGCATGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: PAGPGTGRTPCP*RSGRSGPACSL
Trigger: AAGACTGCATGCAGGCCCTGAGCGGCCAGATCTTCATGGGCATGGTGTCCTCCCAGTACCAGGCCCGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS GCA 72 bp GGCTTGGGAGCCTCGCCAGGCCAGTCGCCACGCTCCTaGTCATTGGAAAGGTGCAGGGTGTTGTTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: GLGASPGQSPRS*SLERCRVLFRE
Trigger: CTCCCTGAACAACACCCTGCACCTTTCCAATGAGCAGGAGCGTGGCGACTGGCCTGGCGAGGCTCCCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578853.1
ENST00000579208.5
ENST00000579241.1
ENST00000580918.1
ENST00000581085.5
ENST00000582843.1
ENST00000585105.5
CDS CCA 72 bp TCCTCCAGGAAGCTGGGGATGTCGCTGTCCGTAGGCTaGAAGCTGATGAGGTCCGAGTGGCCCTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSRKLGMSLSVG*KLMRSEWPSSS
Trigger: GGAGGAGGAGGGCCACTCGGACCTCATCAGCTTCCAGCCTACGGACAGCGACATCCCCAGCTTCCTGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000581723.5
ENST00000581867.1
ENST00000585105.5
CDS CCA 72 bp GCGTCTCGTTCATGGGGCTCCTCCTCTACCTCGGGATaGCAGAAGGAGCGGGTGGATAGGCCATCGGTGAGG +
Preference number: 6 (lower is better)
Translates to: ASRSWGSSSTSG*QKERVDRPSVR
Trigger: CCTCACCGATGGCCTATCCACCCGCTCCTTCTGCCATCCCGAGGTAGAGGAGGAGCCCCATGAACGAGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579241.1
ENST00000580918.1
CDS CCA 72 bp AGCTCAGCCGACGGGACCAGGTTGCCCAAGTACCCATaGCCACAGCACTCACTCTCTGGGGTGCAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: SSADGTRLPKYP*PQHSLSGVQSV
Trigger: CACCGACTGCACCCCAGAGAGTGAGTGCTGTGGCCATGGGTACTTGGGCAACCTGGTCCCGTCGGCTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579898.5
CDS CAA 72 bp CAGGAGAGCAGGAGGCGATGGGAGGTGGGCCCCTCTTaGAAACAATCCCACCCCCGGCAGCGGGATCATGTG +
Preference number: 6 (lower is better)
Translates to: QESRRRWEVGPS*KQSHPRQRDHV
Trigger: CACATGATCCCGCTGCCGGGGGTGGGATTGTTTCAAAGAGGGGCCCACCTCCCATCGCCTCCTGCTCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579898.5
CDS CAA 72 bp GGGACTGAGGAGGTTCCCTTACATCCCAGGAGCAGCTaGGGGGTGACAGCCCCCAAGAGCCCTGGTCTGTCC +
Preference number: 6 (lower is better)
Translates to: GTEEVPLHPRSS*GVTAPKSPGLS
Trigger: GGACAGACCAGGGCTCTTGGGGGCTGTCACCCCCAAGCTGCTCCTGGGATGTAAGGGAACCTCCTCAGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585105.5
CDS CAA 90 bp CCGATCCCTTCGTCAGAGCTCCAGCTGCTGCGGCGGGCGTTCTGCTaGATGGGGATGGTGCTGGGCAGCTCGCACATGGTGAAGATGCTG +
Preference number: 6 (lower is better)
Translates to: PIPSSELQLLRRAFC*MGMVLGSSHMVKML
Trigger: CAGCATCTTCACCATGTGCGAGCTGCCCAGCACCATCCCCATCAAGCAGAACGCCCGCCGCAGCAGCTGGAGCTCTGACGAAGGGATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS CAA 90 bp GCTGGAGCCCTGTCGTCGTTGCTGGGCAGCATGACGGAGGAGCAGTaGGTGAGGTTGCGGTCCCGGGAGCTGTCACAGAAGCTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: AGALSSLLGSMTEEQ*VRLRSRELSQKLCS
Trigger: ACTGCAGAGCTTCTGTGACAGCTCCCGGGACCGCAACCTCACCAACTGCTCCTCCGTCATGCTGCCCAGCAACGACGACAGGGCTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577194.1
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000581453.1
ENST00000585105.5
CDS CAA 90 bp AAGAATGGAAGGGTAGGGGGAGGCTCCACCTACTTCGCAGCAGACTaGGGGAGGGCCTCAGGGACCACTGGCCTAGCCTGGAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: KNGRVGGGSTYFAAD*GRASGTTGLAWRCW
Trigger: CCAGCACCTCCAGGCTAGGCCAGTGGTCCCTGAGGCCCTCCCCAAGTCTGCTGCGAAGTAGGTGGAGCCTCCCCCTACCCTTCCATTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579241.1
CDS CAA 90 bp CAGGCTGGAGCCCTGGGCAGCATGACGGAGGAGCAGTTGGTGAGGTaGCGGTCCCGGGAGCTGTCACAGAAGCTCTGCAGTGTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: QAGALGSMTEEQLVR*RSRELSQKLCSVKP
Trigger: TGGCTTCACACTGCAGAGCTTCTGTGACAGCTCCCGGGACCGCAACCTCACCAACTGCTCCTCCGTCATGCTGCCCAGGGCTCCAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577245.1
CDS CAA 90 bp CCCATGGGACAGGAGAGCAGGAGGCGATGGGAGGTGGGCCCCTCTTaGAAACAATCCCACCCCCGGCAGCGGGATCATGTGAACATCGGC +
Preference number: 6 (lower is better)
Translates to: PMGQESRRRWEVGPS*KQSHPRQRDHVNIG
Trigger: GCCGATGTTCACATGATCCCGCTGCCGGGGGTGGGATTGTTTCAAAGAGGGGCCCACCTCCCATCGCCTCCTGCTCTCCTGTCCCATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579898.5
CDS CAA 90 bp CCTGACCTGATGTCGCTCTGGAGGAAGAGGCAGCTGTTCCGCAGGTaGGCAGAGCTGCCCAGGCAGCAGGTCACCTCCCCGTACTCTTGC +
Preference number: 6 (lower is better)
Translates to: PDLMSLWRKRQLFRR*AELPRQQVTSPYSC
Trigger: GCAAGAGTACGGGGAGGTGACCTGCTGCCTGGGCAGCTCTGCCAACCTGCGGAACAGCTGCCTCTTCCTCCAGAGCGACATCAGGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579898.5
ENST00000581867.1
CDS CAA 90 bp CCCATTCAAGGGACTGAGGAGGTTCCCTTACATCCCAGGAGCAGCTaGGGGGTGACAGCCCCCAAGAGCCCTGGTCTGTCCCAGGTGCCG +
Preference number: 6 (lower is better)
Translates to: PIQGTEEVPLHPRSS*GVTAPKSPGLSQVP
Trigger: CGGCACCTGGGACAGACCAGGGCTCTTGGGGGCTGTCACCCCCAAGCTGCTCCTGGGATGTAAGGGAACCTCCTCAGTCCCTTGAATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585105.5
CDS CAA 90 bp GCAATGCTGATGTCGCTCTGGAGGAAGAGGCAGCTGTTCCGCAGGTaGGCAGAGCTGCCCAGGCAGCAGGTCACCTCCCCGTACTCTTGC +
Preference number: 6 (lower is better)
Translates to: AMLMSLWRKRQLFRR*AELPRQQVTSPYSC
Trigger: GCAAGAGTACGGGGAGGTGACCTGCTGCCTGGGCAGCTCTGCCAACCTGCGGAACAGCTGCCTCTTCCTCCAGAGCGACATCAGCATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000581723.5
ENST00000585105.5
CDS CAA 90 bp GCTGGAGCCCTGTCGTCGTTGCTGGGCAGCATGACGGAGGAGCAGTaGGTGAGGTTGCGGTCCCGGGAGCTGTCACAGAAGCTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: AGALSSLLGSMTEEQ*VRLRSRELSQKLFL
Trigger: CAAGAAGAGCTTCTGTGACAGCTCCCGGGACCGCAACCTCACCAACTGCTCCTCCGTCATGCTGCCCAGCAACGACGACAGGGCTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584694.1
CDS CCA 72 bp CCCGGCCAGTGGAAGCAGGAGCAGCGGTTACTGTGGTaGAGGAAGCTGCTTCTCCACACCTCCTTCCACGTC +
Preference number: 6 (lower is better)
Translates to: PGQWKQEQRLLW*RKLLLHTSFHV
Trigger: GACGTGGAAGGAGGTGTGGAGAAGCAGCTTCCTCCACCACAGTAACCGCTGCTCCTGCTTCCACTGGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577380.5
ENST00000579707.1
ENST00000581085.5
ENST00000581519.5
ENST00000582186.5
ENST00000584383.1
ENST00000585105.5
CDS CCA 72 bp TCAATGAGGCGCACGATGTCCAGCCGGGCCTGGTACTaGGAGGACACCATGCCCATGAAGATCTGGCCGCTC +
Preference number: 6 (lower is better)
Translates to: SMRRTMSSRAWY*EDTMPMKIWPL
Trigger: GAGCGGCCAGATCTTCATGGGCATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACATCGTGCGCCTCATTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS CCA 72 bp TCGCTGTCCGTAGGCTGGAAGCTGATGAGGTCCGAGTaGCCCTCCTCCTCCATGAGGAGGAGCCCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: SLSVGWKLMRSE*PSSSMRRSPSA
Trigger: TGCAGAAGGGCTCCTCCTCATGGAGGAGGAGGGCCACTCGGACCTCATCAGCTTCCAGCCTACGGACAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000581723.5
ENST00000581867.1
ENST00000585105.5
CDS CCA 72 bp GGTGGCGTAGCCAAAGGTCTCCCAGGAGCAACGGGATaGGTACAGGGGATCCAGGGCAATGCTGCTCAGGGT +
Preference number: 6 (lower is better)
Translates to: GGVAKGLPGATG*VQGIQGNAAQG
Trigger: ACCCTGAGCAGCATTGCCCTGGATCCCCTGTACCCATCCCGTTGCTCCTGGGAGACCTTTGGCTACGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579898.5
ENST00000581867.1
CDS CCA 72 bp CTCACACCACAGGCACTGTCACGGCCCACCAGAGGTTaGTCAAGGGGCTCTTTCTCCACAGGGGCTTGGTGC +
Preference number: 6 (lower is better)
Translates to: LTPQALSRPTRG*SRGSFSTGAWC
Trigger: GCACCAAGCCCCTGTGGAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCGTGACAGTGCCTGTGGTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577194.1
ENST00000581453.1
CDS CCA 72 bp ACAACATCAATGAAAGAGCGGGGCTTTGCTTGCATCTaGCGCTGGGCAGCGGGCAGGGGCCGCATCGTGGCA +
Preference number: 6 (lower is better)
Translates to: TTSMKERGFACI*RWAAGRGRIVA
Trigger: TGCCACGATGCGGCCCCTGCCCGCTGCCCAGCGCCAGATGCAAGCAAAGCCCCGCTCTTTCATTGATGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582455.5
CDS CAA 72 bp GGTGCTGGGCAGCTCGCACATGGTGAAGATGCTGCTTaGGCCGGGCACCTGTACCAGCTCGATGCACTTGCC +
Preference number: 6 (lower is better)
Translates to: GAGQLAHGEDAA*AGHLYQLDALA
Trigger: GGCAAGTGCATCGAGCTGGTACAGGTGCCCGGCCAAAGCAGCATCTTCACCATGTGCGAGCTGCCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000585105.5
CDS CAA 72 bp CTGTCGTCGTTGCTGGGCAGCATGACGGAGGAGCAGTaGGTGAGGTTGCGGTCCCGGGAGCTGTCACAGAAG +
Preference number: 6 (lower is better)
Translates to: LSSLLGSMTEEQ*VRLRSRELSQK
Trigger: CTTCTGTGACAGCTCCCGGGACCGCAACCTCACCAACTGCTCCTCCGTCATGCTGCCCAGCAACGACGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577194.1
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000581453.1
ENST00000584694.1
ENST00000585105.5
CDS CAA 90 bp CTGTCGTCGTTGCTGGGCAGCATGACGGAGGAGCAGTTGGTGAGGTaGCGGTCCCGGGAGCTGTCACAGAAGCTCTGCAGTGTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: LSSLLGSMTEEQLVR*RSRELSQKLCSVKP
Trigger: TGGCTTCACACTGCAGAGCTTCTGTGACAGCTCCCGGGACCGCAACCTCACCAACTGCTCCTCCGTCATGCTGCCCAGCAACGACGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577194.1
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000581453.1
ENST00000585105.5
CDS TCA 72 bp GGCCGGGCACCTGTACCAGCTCGATGCACTTGCCATTaGGCTGAGAGGACAGGGCGCAGTTCATGGGCTTGT +
Preference number: 6 (lower is better)
Translates to: GRAPVPARCTCH*AERTGRSSWAC
Trigger: ACAAGCCCATGAACTGCGCCCTGTCCTCTCAGCTCAATGGCAAGTGCATCGAGCTGGTACAGGTGCCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000585105.5
CDS GCA 72 bp AGCCTCCGCTCTACCTCCCGACGCTTCAGCCGGTCTTaGCGCCCGATGAGCACAAGGTTGAGAAGCAGTAAC +
Preference number: 6 (lower is better)
Translates to: SLRSTSRRFSRS*RPMSTRLRSSN
Trigger: GTTACTGCTTCTCAACCTTGTGCTCATCGGGCGGCAAGACCGGCTGAAGCGTCGGGAGGTAGAGCGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579707.1
ENST00000581085.5
ENST00000584383.1
ENST00000585105.5
CDS GCA 72 bp GACACCATGCCCATGAAGATCTGGCCGCTCAGGGCCTaGATGCAGTCTTCCTTCTCCAGCACCTCCCCGATC +
Preference number: 6 (lower is better)
Translates to: DTMPMKIWPLRA*MQSSFSSTSPI
Trigger: GATCGGGGAGGTGCTGGAGAAGGAAGACTGCATGCAGGCCCTGAGCGGCCAGATCTTCATGGGCATGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS GCA 72 bp GAAGCCTGCAGGGCGGGGAACAGGAACTTAGGGCCATaGCCTGGCAATACCCTGCCAGGTCCATTAAGTCCC +
Preference number: 6 (lower is better)
Translates to: EACRAGNRNLGP*PGNTLPGPLSP
Trigger: GGGACTTAATGGACCTGGCAGGGTATTGCCAGGGCATGGCCCTAAGTTCCTGTTCCCCGCCCTGCAGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578624.1
CDS GCA 72 bp TCCCAGGCTGGGTGTTGGAGCCAGATGGGTGTTTGCTaGGGCCATGCGCTTTGTGGTGTGAATAGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: SQAGCWSQMGVC*GHALCGVNRAR
Trigger: CCGAGCCCTATTCACACCACAAAGCGCATGGCCGCAGCAAACACCCATCTGGCTCCAACACCCAGCCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578853.1
CDS GCA 72 bp ACAGTCACAACATCAATGAAAGAGCGGGGCTTTGCTTaGATCTGGCGCTGGGCAGCGGGCAGGGGCCGCATC +
Preference number: 6 (lower is better)
Translates to: TVTTSMKERGFA*IWRWAAGRGRI
Trigger: GATGCGGCCCCTGCCCGCTGCCCAGCGCCAGATGCAAGCAAAGCCCCGCTCTTTCATTGATGTTGTGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582455.5
CDS GCA 72 bp TGTCACAGTCACAACATCAATGAAAGAGCGGGGCTTTaGTTGCATCTGGCGCTGGGCAGCGGGCAGGGGCCG +
Preference number: 6 (lower is better)
Translates to: CHSHNINERAGL*LHLALGSGQGP
Trigger: CGGCCCCTGCCCGCTGCCCAGCGCCAGATGCAAGCAAAGCCCCGCTCTTTCATTGATGTTGTGACTGTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582455.5
CDS CCA 72 bp AGCCCATCAATGAGGCGCACGATGTCCAGCCGGGCCTaGTACTGGGAGGACACCATGCCCATGAAGATCTGG +
Preference number: 6 (lower is better)
Translates to: SPSMRRTMSSRA*YWEDTMPMKIW
Trigger: CCAGATCTTCATGGGCATGGTGTCCTCCCAGTACCAGGCCCGGCTGGACATCGTGCGCCTCATTGATGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
CDS CCA 72 bp GGTGGCGTAGCCAAAGGTCTCCCAGGAGCAACGGGATaGGTACAGGGGATCCAGGGCAATGCTGATGTCGCT +
Preference number: 6 (lower is better)
Translates to: GGVAKGLPGATG*VQGIQGNADVA
Trigger: AGCGACATCAGCATTGCCCTGGATCCCCTGTACCCATCCCGTTGCTCCTGGGAGACCTTTGGCTACGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000581723.5
ENST00000585105.5
CDS CCA 72 bp GAGGGTAGCAAAAGCAGGACAGCCACAGGATGTCGGTaGTACTCAGGAGTGGCGGCAGCTGGACCAGGCAAG +
Preference number: 6 (lower is better)
Translates to: EGSKSRTATGCR*YSGVAAAGPGK
Trigger: CTTGCCTGGTCCAGCTGCCGCCACTCCTGAGTACCACCGACATCCTGTGGCTGTCCTGCTTTTGCTACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000581453.1
ENST00000585105.5
CDS CCA 72 bp CTGCCAGGTCCATTAAGTCCCGTGAGGAGTTGGTACTaGGCCTCTTCTAGGAGGCGGGTCCAGCCAGCCATC +
Preference number: 6 (lower is better)
Translates to: LPGPLSPVRSWY*ASSRRRVQPAI
Trigger: GATGGCTGGCTGGACCCGCCTCCTAGAAGAGGCCCAGTACCAACTCCTCACGGGACTTAATGGACCTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578624.1
ENST00000583071.1
CDS CCA 72 bp ACAACAGTTAGCTCAGGCAGGGTACAGTTAAACCACTaGCCCCGGTCCCGCCCTCCGATCCTAGCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: TTVSSGRVQLNH*PRSRPPILALQ
Trigger: CTGCAGGGCTAGGATCGGAGGGCGGGACCGGGGCCAGTGGTTTAACTGTACCCTGCCTGAGCTAACTGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581453.1
CDS CCA 72 bp CTGCACTGTGAACCGCTCATTGTCCAGGGCAGTGACTaGTCGGGACAGGGCCATGTCCAGGCACCATCAGGT +
Preference number: 6 (lower is better)
Translates to: LHCEPLIVQGSD*SGQGHVQAPSG
Trigger: ACCTGATGGTGCCTGGACATGGCCCTGTCCCGACCAGTCACTGCCCTGGACAATGAGCGGTTCACAGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580416.5
CDS CAA 72 bp TCTTCACCACCCTCGGTGTCCCTGCTGAAGCTCACGTaGGAGCCAGATGGGTGTTTGCTGCGGCCATGCGCT +
Preference number: 6 (lower is better)
Translates to: SSPPSVSLLKLT*EPDGCLLRPCA
Trigger: AGCGCATGGCCGCAGCAAACACCCATCTGGCTCCAACGTGAGCTTCAGCAGGGACACCGAGGGTGGTGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000579241.1
ENST00000580918.1
ENST00000581085.5
ENST00000582843.1
ENST00000585105.5
CDS CAA 72 bp ACTCACACCACAGGCACTGTCACGGCCCACCAGAGGTaGGTCAAGGGGCTCTTTCTCCACAGGGGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: THTTGTVTAHQR*VKGLFLHRGLV
Trigger: CACCAAGCCCCTGTGGAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCGTGACAGTGCCTGTGGTGTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577194.1
ENST00000581453.1
CDS CAA 72 bp CACAGTCACAACATCAATGAAAGAGCGGGGCTTTGCTaGCATCTGGCGCTGGGCAGCGGGCAGGGGCCGCAT +
Preference number: 6 (lower is better)
Translates to: HSHNINERAGLC*HLALGSGQGPH
Trigger: ATGCGGCCCCTGCCCGCTGCCCAGCGCCAGATGCAAGCAAAGCCCCGCTCTTTCATTGATGTTGTGACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582455.5
CDS CAA 90 bp CTGGGCTCTTCTTCACCACCCTCGGTGTCCCTGCTGAAGCTCACGTaGGAGCCAGATGGGTGTTTGCTGCGGCCATGCGCTTTGTGGTGT +
Preference number: 6 (lower is better)
Translates to: LGSSSPPSVSLLKLT*EPDGCLLRPCALWC
Trigger: ACACCACAAAGCGCATGGCCGCAGCAAACACCCATCTGGCTCCAACGTGAGCTTCAGCAGGGACACCGAGGGTGGTGAAGAAGAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000579241.1
ENST00000580918.1
ENST00000581085.5
ENST00000582843.1
ENST00000585105.5
CDS CAA 90 bp GATGGGGATGGTGCTGGGCAGCTCGCACATGGTGAAGATGCTGCTTaGGCCGGGCACCTGTACCAGCTCGATGCACTTGCCATTGAGCTG +
Preference number: 6 (lower is better)
Translates to: DGDGAGQLAHGEDAA*AGHLYQLDALAIEL
Trigger: CAGCTCAATGGCAAGTGCATCGAGCTGGTACAGGTGCCCGGCCAAAGCAGCATCTTCACCATGTGCGAGCTGCCCAGCACCATCCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000585105.5
CDS CAA 90 bp CTGTCGTCGTTGCTGGGCAGCATGACGGAGGAGCAGTTGGTGAGGTaGCGGTCCCGGGAGCTGTCACAGAAGCTCTTCTTGGGAATGGAC +
Preference number: 6 (lower is better)
Translates to: LSSLLGSMTEEQLVR*RSRELSQKLFLGMD
Trigger: GTCCATTCCCAAGAAGAGCTTCTGTGACAGCTCCCGGGACCGCAACCTCACCAACTGCTCCTCCGTCATGCTGCCCAGCAACGACGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584694.1
CDS TCA 72 bp TGCTGGGCTCTTCTTCACCACCCTCGGTGTCCCTGCTaGAGCTCACGTTGGAGCCAGATGGGTGTTTGCTGC +
Preference number: 6 (lower is better)
Translates to: CWALLHHPRCPC*SSRWSQMGVCC
Trigger: GCAGCAAACACCCATCTGGCTCCAACGTGAGCTTCAGCAGGGACACCGAGGGTGGTGAAGAAGAGCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000579241.1
ENST00000580918.1
ENST00000581085.5
ENST00000582843.1
ENST00000585105.5
CDS TCA 72 bp CCCTCTCACCAGTGTGCAGGACAATCAGGGCGGCCGTaGGCTTCTGAGCCGACAGCAGTCCATTGGCAAAGT +
Preference number: 6 (lower is better)
Translates to: PSHQCAGQSGRP*ASEPTAVHWQS
Trigger: ACTTTGCCAATGGACTGCTGTCGGCTCAGAAGCTCACGGCCGCCCTGATTGTCCTGCACACTGGTGAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577194.1
ENST00000579898.5
CDS GCA 72 bp GTGAGGTTGCGGTCCCGGGAGCTGTCACAGAAGCTCTaGAGTGTGAAGCCAAAGCAGATGAGGCAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: VRLRSRELSQKL*SVKPKQMRQEL
Trigger: CAGCTCCTGCCTCATCTGCTTTGGCTTCACACTGCAGAGCTTCTGTGACAGCTCCCGGGACCGCAACCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577194.1
ENST00000577245.1
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000581453.1
ENST00000585105.5
CDS GCA 72 bp CCATCCCAGGCTGGGTGTTGGAGCCAGATGGGTGTTTaGTGCGGCCATGCGCTTTGTGGTGTGAATAGGGCT +
Preference number: 6 (lower is better)
Translates to: PSQAGCWSQMGV*CGHALCGVNRA
Trigger: AGCCCTATTCACACCACAAAGCGCATGGCCGCAGCAAACACCCATCTGGCTCCAACACCCAGCCTGGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578853.1
CDS CCA 72 bp GCAGGACAGCCACAGGATGTCGGTGGTACTCAGGAGTaGCGGCAGCTGGACCAGGCAAGAAAGGAACTGGAT +
Preference number: 6 (lower is better)
Translates to: AGQPQDVGGTQE*RQLDQARKELD
Trigger: ATCCAGTTCCTTTCTTGCCTGGTCCAGCTGCCGCCACTCCTGAGTACCACCGACATCCTGTGGCTGTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000581453.1
ENST00000585105.5
CDS CCA 72 bp CGACAGCAGTCCATTGGCAAAGTCCTCAAACCAGGCTaGAGCCCTGTCGTCGTTGCTGGGCAGCATGACGGA +
Preference number: 6 (lower is better)
Translates to: RQQSIGKVLKPG*SPVVVAGQHDG
Trigger: TCCGTCATGCTGCCCAGCAACGACGACAGGGCTCCAGCCTGGTTTGAGGACTTTGCCAATGGACTGCTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577194.1
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000581453.1
ENST00000584694.1
ENST00000585105.5
CDS CCA 72 bp GCAGGACAGCCACAGGATGTCGGTGGTACTCAGGAGTaGCGGCAGCTGGACCAGGCAAGAAAGGAACTGTTC +
Preference number: 6 (lower is better)
Translates to: AGQPQDVGGTQE*RQLDQARKELF
Trigger: GAACAGTTCCTTTCTTGCCTGGTCCAGCTGCCGCCACTCCTGAGTACCACCGACATCCTGTGGCTGTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577247.5
CDS CAA 90 bp CCTAGCAATACTCACACCACAGGCACTGTCACGGCCCACCAGAGGTaGGTCAAGGGGCTCTTTCTCCACAGGGGCTTGGTGCGATGCACA +
Preference number: 6 (lower is better)
Translates to: PSNTHTTGTVTAHQR*VKGLFLHRGLVRCT
Trigger: TGTGCATCGCACCAAGCCCCTGTGGAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCGTGACAGTGCCTGTGGTGTGAGTATTGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577194.1
ENST00000581453.1
CDS CAA 90 bp ACGGCCCACCAGAGGTTGGTCAAGGGGCTCTTTCTCCACAGGGGCTaGGTGCGATGCACATGGGTGATGGAAATGAAGACAGTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: TAHQRLVKGLFLHRG*VRCTWVMEMKTVCR
Trigger: CCTGCACACTGTCTTCATTTCCATCACCCATGTGCATCGCACCAAGCCCCTGTGGAGAAAGAGCCCCTTGACCAACCTCTGGTGGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577245.1
ENST00000577247.5
ENST00000579208.5
ENST00000581085.5
ENST00000581453.1
ENST00000584694.1
ENST00000585105.5
CDS CAA 90 bp CTCCCTGGGACTCACGGACAGCAAGGCTCTGCAATGCCACTGGGCTaGGAATGCAGACACCATATTCCCATCCTTTGGACAATCCCGGCC +
Preference number: 6 (lower is better)
Translates to: LPGTHGQQGSAMPLG*ECRHHIPILWTIPA
Trigger: GGCCGGGATTGTCCAAAGGATGGGAATATGGTGTCTGCATTCCAAGCCCAGTGGCATTGCAGAGCCTTGCTGTCCGTGAGTCCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS CAA 90 bp GCCCTGCTGACAGCTCACCGAATCTCATGTAGCTTCACGATCTCATaGGTCACCACCACAAGGACCAGGGACAGGCAGCCCAGGAGCCAT +
Preference number: 6 (lower is better)
Translates to: ALLTAHRISCSFTIS*VTTTRTRDRQPRSH
Trigger: ATGGCTCCTGGGCTGCCTGTCCCTGGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGCTACATGAGATTCGGTGAGCTGTCAGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585105.5
CDS TCA 72 bp CCAGTGTGCAGGACAATCAGGGCGGCCGTGAGCTTCTaGGCCGACAGCAGTCCATTGGCAAAGTCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: PVCRTIRAAVSF*ADSSPLAKSSN
Trigger: GTTTGAGGACTTTGCCAATGGACTGCTGTCGGCTCAGAAGCTCACGGCCGCCCTGATTGTCCTGCACACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577194.1
ENST00000579898.5
CDS GCA 72 bp AGAGAGGGTAGATGTCAGCTCCGTCCCAGAAGTCTGTaGAGGCCTCTAAGACCACATCAGCGGTGCCATGGG +
Preference number: 6 (lower is better)
Translates to: REGRCQLRPRSL*RPLRPHQRCHG
Trigger: CCCATGGCACCGCTGATGTGGTCTTAGAGGCCTGCACAGACTTCTGGGACGGAGCTGACATCTACCCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578853.1
ENST00000579208.5
ENST00000581085.5
ENST00000585105.5
CDS GCA 72 bp GAGCATGGGCCAGAGTCTGAGCCACAAGCAGTCAGCTaGAAGAACTTCCAACACCTCCCTCAAAGCGGGGAG +
Preference number: 6 (lower is better)
Translates to: EHGPESEPQAVS*KNFQHLPQSGE
Trigger: CTCCCCGCTTTGAGGGAGGTGTTGGAAGTTCTTGCAGCTGACTGCTTGTGGCTCAGACTCTGGCCCATGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375248.9
ENST00000585105.5
CDS CCA 72 bp GGCATGTGGAGGTCTGGATACATGGCACTGGGCCACTaGATCTCCCTGCCATCCCTGAGGGCATCTTGGATT +
Preference number: 6 (lower is better)
Translates to: GMWRSGYMALGH*ISLPSLRASWI
Trigger: AATCCAAGATGCCCTCAGGGATGGCAGGGAGATCCAGTGGCCCAGTGCCATGTATCCAGACCTCCACATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000581085.5
ENST00000583795.1
ENST00000584383.1
ENST00000585105.5
CDS CCA 72 bp GTGTCCGTCTCTGTAGGCCCAGTGCAAGGACCAGGATaGCGCAAAAGGCATGTGGAGGTCTGGATACATGGC +
Preference number: 6 (lower is better)
Translates to: VSVSVGPVQGPG*RKRHVEVWIHG
Trigger: GCCATGTATCCAGACCTCCACATGCCTTTTGCGCCATCCTGGTCCTTGCACTGGGCCTACAGAGACGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000581085.5
ENST00000583795.1
ENST00000585105.5
CDS CCA 72 bp AATACCCTGCCAGGTCCATTAAGTCCCGTGAGGAGTTaGTACTGGGCCTCTTCTAGGAGGCGGGTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: NTLPGPLSPVRS*YWASSRRRVQP
Trigger: TGGCTGGACCCGCCTCCTAGAAGAGGCCCAGTACCAACTCCTCACGGGACTTAATGGACCTGGCAGGGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578624.1
ENST00000583071.1
CDS CCA 72 bp CACAGGATGTCGGTGGTACTCAGGAGTGGCGGCAGCTaGACCAGGCAAGAAAGGAACTGTTCGATAAGCCGG +
Preference number: 6 (lower is better)
Translates to: HRMSVVLRSGGS*TRQERNCSISR
Trigger: CCGGCTTATCGAACAGTTCCTTTCTTGCCTGGTCCAGCTGCCGCCACTCCTGAGTACCACCGACATCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577247.5
CDS CAA 72 bp TACAGCGCCAGATGGTTCTCCTGCTTGAAAAGCTCCTaGGCCCCAGGAGTGAAGCCAATGAGGCGGGCAAGC +
Preference number: 6 (lower is better)
Translates to: YSARWFSCLKSS*APGVKPMRRAS
Trigger: GCTTGCCCGCCTCATTGGCTTCACTCCTGGGGCCAAGGAGCTTTTCAAGCAGGAGAACCATCTGGCGCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000578853.1
ENST00000579208.5
ENST00000581085.5
ENST00000583296.1
ENST00000585105.5
CDS CAA 90 bp CAGGTTGGCAGAGCTGCCCAGGCAGCAGGTCACCTCCCCGTACTCTaGCATGATCTTTATCATCTCACACATGGTCTCTGGGGTGCAGTC +
Preference number: 6 (lower is better)
Translates to: QVGRAAQAAGHLPVL*HDLYHLTHGLWGAV
Trigger: GACTGCACCCCAGAGACCATGTGTGAGATGATAAAGATCATGCAAGAGTACGGGGAGGTGACCTGCTGCCTGGGCAGCTCTGCCAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000581723.5
ENST00000581867.1
ENST00000585105.5
CDS CAA 90 bp TGCAATGCCACTGGGCTTGGAATGCAGACACCATATTCCCATCCTTaGGACAATCCCGGCCTCTGCAGCCAACACCATCCCAGCCCTGGT +
Preference number: 6 (lower is better)
Translates to: CNATGLGMQTPYSHP*DNPGLCSQHHPSPG
Trigger: ACCAGGGCTGGGATGGTGTTGGCTGCAGAGGCCGGGATTGTCCAAAGGATGGGAATATGGTGTCTGCATTCCAAGCCCAGTGGCATTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS TCA 72 bp GTACTGCAGGCATGCCCAGATGAATGTGGTCACCCCTaGAAGGAAGGCTCCTCCCCAGCATGTACAAACCCC +
Preference number: 6 (lower is better)
Translates to: VLQACPDECGHP*KEGSSPACTNP
Trigger: GGGGTTTGTACATGCTGGGGAGGAGCCTTCCTTTCAGGGGTGACCACATTCATCTGGGCATGCCTGCAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000577380.5
ENST00000579208.5
ENST00000580416.5
ENST00000581085.5
ENST00000581519.5
ENST00000582186.5
ENST00000582455.5
ENST00000585277.1
CDS TCA 72 bp ACAGTGTGCAGGACAATCAGGGCGGCCGTGAGCTTCTaGGCCGACAGCAGTCCATTGGCAAAGTCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: TVCRTIRAAVSF*ADSSPLAKSSN
Trigger: GTTTGAGGACTTTGCCAATGGACTGCTGTCGGCTCAGAAGCTCACGGCCGCCCTGATTGTCCTGCACACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577245.1
ENST00000577247.5
ENST00000579208.5
ENST00000581085.5
ENST00000581453.1
ENST00000584694.1
ENST00000585105.5
CDS TCA 72 bp TTCCACAGGAGTCACTTTATCCGATGGCATGGATGGTaGGCTTCCGAGGAGCCTGAAAACGCTTCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: FHRSHFIRWHGW*ASEEPENASGP
Trigger: GGGCCCCGAAGCGTTTTCAGGCTCCTCGGAAGCTCACCATCCATGCCATCGGATAAAGTGACTCCTGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581834.1
ENST00000582455.5
CDS GCA 72 bp ACACCATATTCCCATCCTTTGGACAATCCCGGCCTCTaGAGCCAACACCATCCCAGCCCTGGTCCCCAATTC +
Preference number: 6 (lower is better)
Translates to: TPYSHPLDNPGL*SQHHPSPGPQF
Trigger: GAATTGGGGACCAGGGCTGGGATGGTGTTGGCTGCAGAGGCCGGGATTGTCCAAAGGATGGGAATATGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS GCA 72 bp GACTCCCTGGGACTCACGGACAGCAAGGCTCTGCAATaGCACTGGGCTTGGAATGCAGACACCATATTCCCA +
Preference number: 6 (lower is better)
Translates to: DSLGLTDSKALQ*HWAWNADTIFP
Trigger: TGGGAATATGGTGTCTGCATTCCAAGCCCAGTGGCATTGCAGAGCCTTGCTGTCCGTGAGTCCCAGGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS GCA 72 bp GAGGAGACTCCCTGGGACTCACGGACAGCAAGGCTCTaGAATGCCACTGGGCTTGGAATGCAGACACCATAT +
Preference number: 6 (lower is better)
Translates to: EETPWDSRTARL*NATGLGMQTPY
Trigger: ATATGGTGTCTGCATTCCAAGCCCAGTGGCATTGCAGAGCCTTGCTGTCCGTGAGTCCCAGGGAGTCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS GCA 72 bp TCTAAGACCACATCAGCGGTGCCATGGGACAGCATCTaGTCTGTGCCTGGGGGAGAGAGTTCAAACCCTGAG +
Preference number: 6 (lower is better)
Translates to: SKTTSAVPWDSI*SVPGGESSNPE
Trigger: CTCAGGGTTTGAACTCTCTCCCCCAGGCACAGAGCAGATGCTGTCCCATGGCACCGCTGATGTGGTCTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS CCA 72 bp TGTTCGATAAGCCGGATGATGCTGATGGTCTCCTCCTaGCGAAAGGTCAGGGAACAGGGCAGGCTGTTGAGC +
Preference number: 6 (lower is better)
Translates to: CSISRMMLMVSS*RKVREQGRLLS
Trigger: GCTCAACAGCCTGCCCTGTTCCCTGACCTTTCGCCAGGAGGAGACCATCAGCATCATCCGGCTTATCGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
ENST00000585105.5
CDS CCA 72 bp CTCGGACCCGAATCTCATGTAGCTTCACGATCTCATTaGTCACCACCACAAGGACCAGGGACAGGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: LGPESHVASRSH*SPPQGPGTGSP
Trigger: TGGGCTGCCTGTCCCTGGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGCTACATGAGATTCGGGTCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
CDS CAA 72 bp ACTCGGACCCGAATCTCATGTAGCTTCACGATCTCATaGGTCACCACCACAAGGACCAGGGACAGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: TRTRISCSFTIS*VTTTRTRDRQP
Trigger: GGGCTGCCTGTCCCTGGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGCTACATGAGATTCGGGTCCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577247.5
ENST00000579208.5
ENST00000579898.5
ENST00000581085.5
CDS TCA 72 bp TGCCCAGGCAGCAGGTCACCTCCCCGTACTCTTGCATaGTCTTTATCATCTCACACATGGTCTCTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: CPGSRSPPRTLA*SLSSHTWSLGC
Trigger: GCACCCCAGAGACCATGTGTGAGATGATAAAGATCATGCAAGAGTACGGGGAGGTGACCTGCTGCCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000581723.5
ENST00000581867.1
ENST00000585105.5
CDS TCA 72 bp CACGTGACCAAGGCAACGCCAAAGTTTAGCCCGCGGTaGCACACCAATGAAAGAGCGGGGCTTTGCTTGCAT +
Preference number: 6 (lower is better)
Translates to: HVTKATPKFSPR*HTNERAGLCLH
Trigger: ATGCAAGCAAAGCCCCGCTCTTTCATTGGTGTGTCACCGCGGGCTAAACTTTGGCGTTGCCTTGGTCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581834.1
CDS GCA 72 bp AGGTGCTTCTCCTTCAGGTCCATGGGCCAAGAGTACTaGAGGCATGCCCAGATGAATGTGGTCACCCCTGAA +
Preference number: 6 (lower is better)
Translates to: RCFSFRSMGQEY*RHAQMNVVTPE
Trigger: TTCAGGGGTGACCACATTCATCTGGGCATGCCTGCAGTACTCTTGGCCCATGGACCTGAAGGAGAAGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000577380.5
ENST00000579208.5
ENST00000580416.5
ENST00000581085.5
ENST00000581519.5
ENST00000582186.5
ENST00000582455.5
ENST00000585277.1
CDS GCA 72 bp GAGCTGCCCAGGCAGCAGGTCACCTCCCCGTACTCTTaGATGATCTTTATCATCTCACACATGGTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ELPRQQVTSPYS*MIFIISHMVSG
Trigger: CCCAGAGACCATGTGTGAGATGATAAAGATCATGCAAGAGTACGGGGAGGTGACCTGCTGCCTGGGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000581085.5
ENST00000581723.5
ENST00000581867.1
ENST00000585105.5
CDS GCA 72 bp GAGCTGCCCAGGCAGCAGGTCACCTCCCCGTACTCTTaGATGATCTTTATCATCTCACACATGGCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: ELPRQQVTSPYS*MIFIISHMAED
Trigger: GTCCTCAGCCATGTGTGAGATGATAAAGATCATGCAAGAGTACGGGGAGGTGACCTGCTGCCTGGGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579898.5
CDS CCA 72 bp CAAAGCTATGATGTCTCCTTCAACCAGCAGGCTGACTaGCAGGTTGACCAGGTGTCCGTCTCTGTAGGCCCA +
Preference number: 6 (lower is better)
Translates to: QSYDVSFNQQAD*QVDQVSVSVGP
Trigger: TGGGCCTACAGAGACGGACACCTGGTCAACCTGCCAGTCAGCCTGCTGGTTGAAGGAGACATCATAGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000581085.5
ENST00000583795.1
ENST00000585105.5
CDS CCA 72 bp CTGGGCTTGGAATGCAGACACCATATTCCCATCCTTTaGACAATCCCGGCCTCTGCAGCCAACACCATCCCA +
Preference number: 6 (lower is better)
Translates to: LGLECRHHIPIL*TIPASAANTIP
Trigger: TGGGATGGTGTTGGCTGCAGAGGCCGGGATTGTCCAAAGGATGGGAATATGGTGTCTGCATTCCAAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS CCA 72 bp CAGCTCACCGAATCTCATGTAGCTTCACGATCTCATTaGTCACCACCACAAGGACCAGGGACAGGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: QLTESHVASRSH*SPPQGPGTGSP
Trigger: TGGGCTGCCTGTCCCTGGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGCTACATGAGATTCGGTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585105.5
CDS CAA 72 bp ACTGGGCTTGGAATGCAGACACCATATTCCCATCCTTaGGACAATCCCGGCCTCTGCAGCCAACACCATCCC +
Preference number: 6 (lower is better)
Translates to: TGLGMQTPYSHP*DNPGLCSQHHP
Trigger: GGGATGGTGTTGGCTGCAGAGGCCGGGATTGTCCAAAGGATGGGAATATGGTGTCTGCATTCCAAGCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS CAA 72 bp ACAGCTCACCGAATCTCATGTAGCTTCACGATCTCATaGGTCACCACCACAAGGACCAGGGACAGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: TAHRISCSFTIS*VTTTRTRDRQP
Trigger: GGGCTGCCTGTCCCTGGTCCTTGTGGTGGTGACCAATGAGATCGTGAAGCTACATGAGATTCGGTGAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585105.5
CDS TCA 72 bp GAAGAACAGTACAGTCTCTGGGCTGGGATTTGGCCATaGCAGGATCCCCTGTTTGTCCACACAGCACAGGAC +
Preference number: 6 (lower is better)
Translates to: EEQYSLWAGIWP*QDPLFVHTAQD
Trigger: GTCCTGTGCTGTGTGGACAAACAGGGGATCCTGTCATGGCCAAATCCCAGCCCAGAGACTGTACTGTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000579208.5
ENST00000579241.1
ENST00000580918.1
ENST00000581085.5
ENST00000581252.5
ENST00000585105.5
CDS TCA 72 bp GGAGACAGCCTCCGTATAGCTGCTGAGAGTATCCTCTaGGAACTTAGCCAGCAGGTGCTTCTCCTTCAGGTC +
Preference number: 6 (lower is better)
Translates to: GDSLRIAAESIL*ELSQQVLLLQV
Trigger: GACCTGAAGGAGAAGCACCTGCTGGCTAAGTTCTCAGAGGATACTCTCAGCAGCTATACGGAGGCTGTCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579208.5
CDS TCA 72 bp AAAGGAAGGCTCCTCCCCAGCATGTACAAACCCCAGTaGGTCTGTCACAGTCACAACATCAGTGCCACGCCT +
Preference number: 6 (lower is better)
Translates to: KGRLLPSMYKPQ*VCHSHNISATP
Trigger: AGGCGTGGCACTGATGTTGTGACTGTGACAGACTCACTGGGGTTTGTACATGCTGGGGAGGAGCCTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581519.5
CDS CCA 72 bp GGGCTCTTTCTCCACAGGGGCTTGGTGCGATGCACATaGGTGATGGAAATGAAGACAGTGTGCAGGACAATC +
Preference number: 6 (lower is better)
Translates to: GLFLHRGLVRCT*VMEMKTVCRTI
Trigger: GATTGTCCTGCACACTGTCTTCATTTCCATCACCCATGTGCATCGCACCAAGCCCCTGTGGAGAAAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000314256.12
ENST00000375248.9
ENST00000577245.1
ENST00000577247.5
ENST00000579208.5
ENST00000581085.5
ENST00000581453.1
ENST00000584694.1
ENST00000585105.5
CDS CCA 72 bp CTGGGACTCACGGACAGCAAGGCTCTGCAATGCCACTaGGCTTGGAATGCAGACACCATATTCCCATCCTTT +
Preference number: 6 (lower is better)
Translates to: LGLTDSKALQCH*AWNADTIFPSF
Trigger: AAAGGATGGGAATATGGTGTCTGCATTCCAAGCCCAGTGGCATTGCAGAGCCTTGCTGTCCGTGAGTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS CAA 72 bp ACTCACGGACAGCAAGGCTCTGCAATGCCACTGGGCTaGGAATGCAGACACCATATTCCCATCCTTTGGACA +
Preference number: 6 (lower is better)
Translates to: THGQQGSAMPLG*ECRHHIPILWT
Trigger: TGTCCAAAGGATGGGAATATGGTGTCTGCATTCCAAGCCCAGTGGCATTGCAGAGCCTTGCTGTCCGTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581085.5
ENST00000585105.5
CDS CAA 90 bp GTCTGTCACAGTCACAACATCTGGTGCATTCCTTCTTCAGGACCTTaGCAGCAGCTATTCCCACAGCCAGAATGCCCTTCTCCAGGACAT +
Preference number: 6 (lower is better)
Translates to: VCHSHNIWCIPSSGP*QQLFPQPECPSPGH
Trigger: ATGTCCTGGAGAAGGGCATTCTGGCTGTGGGAATAGCTGCTGCAAAGGTCCTGAAGAAGGAATGCACCAGATGTTGTGACTGTGACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577380.5
CDS TCA 72 bp AAAGGAAGGCTCCTCCCCAGCATGTACAAACCCCAGTaGGTCTGTCACAGTCACAACATCTGGTGCATTCCT +
Preference number: 6 (lower is better)
Translates to: KGRLLPSMYKPQ*VCHSHNIWCIP
Trigger: AGGAATGCACCAGATGTTGTGACTGTGACAGACTCACTGGGGTTTGTACATGCTGGGGAGGAGCCTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577380.5
CDS TCA 72 bp GTACTCTTGCATGATCTTTATCATCTCACACATGGCTaGGGACAGCGTATAAGGGCACCAGAGTCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: VLLHDLYHLTHG*GQRIRAPESGR
Trigger: CCTGCCTGACTCTGGTGCCCTTATACGCTGTCCTCAGCCATGTGTGAGATGATAAAGATCATGCAAGAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579898.5
CDS TCA 72 bp AAAGGAAGGCTCCTCCCCAGCATGTACAAACCCCAGTaGGTCTGTCACAGTCACAACATCAATGAAAGAGCG +
Preference number: 6 (lower is better)
Translates to: KGRLLPSMYKPQ*VCHSHNINERA
Trigger: CGCTCTTTCATTGATGTTGTGACTGTGACAGACTCACTGGGGTTTGTACATGCTGGGGAGGAGCCTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582455.5
CDS CAA 72 bp AGTCACAACATCTGGTGCATTCCTTCTTCAGGACCTTaGCAGCAGCTATTCCCACAGCCAGAATGCCCTTCT +
Preference number: 6 (lower is better)
Translates to: SHNIWCIPSSGP*QQLFPQPECPS
Trigger: AGAAGGGCATTCTGGCTGTGGGAATAGCTGCTGCAAAGGTCCTGAAGAAGGAATGCACCAGATGTTGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577380.5
CDS CCA 72 bp AACATCTCTAAGAGGGAGCTCCGGGCTGTGTATATTTaGAAGGTTCCAGTAGGGACACCAGTGATTGCGATT +
Preference number: 6 (lower is better)
Translates to: NISKRELRAVYI*KVPVGTPVIAI
Trigger: AATCGCAATCACTGGTGTCCCTACTGGAACCTTCCAAATATACACAGCCCGGAGCTCCCTCTTAGAGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579241.1
CDS GCA 72 bp CTGAAATCCGCTTCCTGTCCTTCTTGGGCTCCTGTCTaGTTCTATGGACTATTAATATATCTCATGACACTG +
Preference number: 6 (lower is better)
Translates to: LKSASCPSWAPV*FYGLLIYLMTL
Trigger: CAGTGTCATGAGATATATTAATAGTCCATAGAAGCAGACAGGAGCCCAAGAAGGACAGGAAGCGGATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582843.1
ENST00000583071.1