RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM92 (Homo sapiens)

Ensembl gene IDs: ENSG00000167105

Ensembl transcript IDs: ENST00000300433.7, ENST00000507382.2, ENST00000511882.1

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACTGTCCTCCCAGACCTCCCAGGTGGCTCATCAGTGGTGGGATTaGGGCGCAGCGACCCCATCACCGCACCCCTCAGCAGTGCCTGGG +
Preference number: 1 (lower is better)
Translates to: GLSSQTSQVAHQWWD*GAATPSPHPSAVPG
Trigger: CCCAGGCACTGCTGAGGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTGGGAGGTCTGGGAGGACAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 90 bp GGGCCCTATCTCACTGGGAACCCACACCCGGACAGTCCCTGTTCCTaGCATCTTTGGGGCTGCCTGTGCCATCAAGCTGCCCCCAGCTCT +
Preference number: 1 (lower is better)
Translates to: GPYLTGNPHPDSPCS*HLWGCLCHQAAPSS
Trigger: AGAGCTGGGGGCAGCTTGATGGCACAGGCAGCCCCAAAGATGCCAGGAACAGGGACTGTCCGGGTGTGGGTTCCCAGTGAGATAGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 90 bp ATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTGCCTaGAGAAGGAGGCTGGCATTGAGTGGGCTGTGGGGGCGCAGTGCA +
Preference number: 1 (lower is better)
Translates to: ILLRALASIDMGLSA*RRRLALSGLWGRSA
Trigger: TGCACTGCGCCCCCACAGCCCACTCAATGCCAGCCTCCTTCTCCAGGCAGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 90 bp GCCAATACATCTAGAACAAGCCTCTCTCCGAGGGCGGCCCATGGATaGACTGTCCTCCCAGACCTCCCAGGTGGCTCATCAGTGGTGGGA +
Preference number: 1 (lower is better)
Translates to: ANTSRTSLSPRAAHG*TVLPDLPGGSSVVG
Trigger: TCCCACCACTGATGAGCCACCTGGGAGGTCTGGGAGGACAGTCCATCCATGGGCCGCCCTCGGAGAGAGGCTTGTTCTAGATGTATTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 90 bp CCCCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATaGGCTGTCCCAGGGCTGCTTCCTGGATCCAACCCCCTCACAGCC +
Preference number: 1 (lower is better)
Translates to: PHCLPAGGFLLSTAE*AVPGLLPGSNPLTA
Trigger: GGCTGTGAGGGGGTTGGATCCAGGAAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR TCA 90 bp GCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTaGGAGCTTTGGCCAGCATTGACATGGGGCTCTCTGCCTGGAGAA +
Preference number: 1 (lower is better)
Translates to: APLLAYQGQFYLQSS*ELWPALTWGSLPGE
Trigger: TTCTCCAGGCAGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR GCA 90 bp CAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCAGGGCTaGTTCCTGGATCCAACCCCCTCACAGCCAACTTACCAACTTCTC +
Preference number: 1 (lower is better)
Translates to: QVVSCYQQQNGLSQG*FLDPTPSQPTYQLL
Trigger: GAGAAGTTGGTAAGTTGGCTGTGAGGGGGTTGGATCCAGGAAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR GCA 90 bp GGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTaGTGCACTCCTTCCAGGGCCCTATCTCACTGGGAACCCACACCC +
Preference number: 1 (lower is better)
Translates to: GSFSYGQPWHYIVSN*CTPSRALSHWEPTP
Trigger: GGGTGTGGGTTCCCAGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 90 bp TCACAGCCAACTTACCAACTTCTCATGGTAAGACAGCCAGAGAGCTaGGCTCCATGTGTCCCAGGAAAGCCTTGGGCGGAAGGGATTGGG +
Preference number: 1 (lower is better)
Translates to: SQPTYQLLMVRQPES*APCVPGKPWAEGIG
Trigger: CCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACACATGGAGCCCAGCTCTCTGGCTGTCTTACCATGAGAAGTTGGTAAGTTGGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 90 bp TATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCACTaGGAACCCACACCCGGACAGTCCCTGTTCCTGGCATCTTTGGGG +
Preference number: 1 (lower is better)
Translates to: YIVSNCCTPSRALSH*EPTPGQSLFLASLG
Trigger: CCCCAAAGATGCCAGGAACAGGGACTGTCCGGGTGTGGGTTCCCAGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR GCA 90 bp TCATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTGCTaGACTCCTTCCAGGGCCCTATCTCACTGGGAACCCACACCCGGA +
Preference number: 1 (lower is better)
Translates to: SFSYGQPWHYIVSNC*TPSRALSHWEPTPG
Trigger: TCCGGGTGTGGGTTCCCAGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 90 bp GGAAACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTaGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTA +
Preference number: 1 (lower is better)
Translates to: GNFHLRLGSFSYGQP*HYIVSNCCTPSRAL
Trigger: TAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR GCA 90 bp CATTTCTCAACATCCTCCTGCTATCACGGTGAGGGCAACATCAGCTaGAGGACTTCTCTAATTGGAACTAGCCACATCTACACAAAGAAC +
Preference number: 1 (lower is better)
Translates to: HFSTSSCYHGEGNIS*RTSLIGTSHIYTKN
Trigger: GTTCTTTGTGTAGATGTGGCTAGTTCCAATTAGAGAAGTCCTGCAGCTGATGTTGCCCTCACCGTGATAGCAGGAGGATGTTGAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 90 bp TGGACTGTCCTCCCAGACCTCCCAGGTGGCTCATCAGTGGTGGGATaGCGGCGCAGCGACCCCATCACCGCACCCCTCAGCAGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: WTVLPDLPGGSSVVG*RRSDPITAPLSSAW
Trigger: CCAGGCACTGCTGAGGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTGGGAGGTCTGGGAGGACAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp ATTCCAGGGTGGGGCCGTTCAAGGTCTCCTAAAGCCCCACTCCACGGATGCCCAAGGGCGGCCCATGGATaGACTGTCCTCCCAGACCTC +
Preference number: 2 (lower is better)
Translates to: IPGWGRSRSPKAPLHGCPRAAHG*TVLPDL
Trigger: GAGGTCTGGGAGGACAGTCCATCCATGGGCCGCCCT...TGGGCATCCGTGGAGTGGGGCTTTAGGAGACCTTGAACGGCCCCACCCTGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp GGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTTCCGAGGGCGGCCCATaGATGGACTGTCCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: GTPVGIPGPVLPPILLRASEGGP*MDCPPR
Trigger: TCTGGGAGGACAGTCCATCCATGGGCCGCCCTCGGA...AGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCCGCACCCCTCAGCAGTaGCTGGGCTCACCTCTCCAC +
Preference number: 2 (lower is better)
Translates to: CHQVTATLGFRMATFPRARTPQQ*LGSPLH
Trigger: GTGGAGAGGTGAGCCCAGGCACTGCTGAGGGGTGCG...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR TCA 90 bp GGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTTGGGTCGAACCCCAGTaGAGACTCTTCTCCCCTAGG +
Preference number: 2 (lower is better)
Translates to: GTPVGIPGPVLPPILLRAWVEPQ*RLFSPR
Trigger: CCTAGGGGAGAAGAGTCTTCACTGGGGTTCGACCCA...AGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp CTGAGTCCCAAGGCATTGGCATTGTCCCGCCCCATTCTGCATGACTATGCCAGGCATCAGTGGTGGGATTaGGGCGCAGCGACCCCATCA +
Preference number: 2 (lower is better)
Translates to: LSPKALALSRPILHDYARHQWWD*GAATPS
Trigger: TGATGGGGTCGCTGCGCCGCAATCCCACCACTGATG...CCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp GGAAACCCACACAAGGGACACGCGTACCCCATTTCCAGGCTGTTTGGCACACAGCATCAGTGGTGGGATTaGGGCGCAGCGACCCCATCA +
Preference number: 2 (lower is better)
Translates to: GNPHKGHAYPISRLFGTQHQWWD*GAATPS
Trigger: TGATGGGGTCGCTGCGCCGCAATCCCACCACTGATG...CTGTGTGCCAAACAGCCTGGAAATGGGGTACGCGTGTCCCTTGTGTGGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp GGGCTGCTTCCTGGATCCAACCCCCTCACAGCCAACTTACCAACTTCTCATGGTGTGGCTCATCAGTGGTaGGATTGCGGCGCAGCGACC +
Preference number: 2 (lower is better)
Translates to: GLLPGSNPLTANLPTSHGVAHQW*DCGAAT
Trigger: GGTCGCTGCGCCGCAATCCCACCACTGATGAGCCAC...ACCATGAGAAGTTGGTAAGTTGGCTGTGAGGGGGTTGGATCCAGGAAGCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp CCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCTCCGAGGGCGGCCCATaGATGGACTGTCCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PLSPSRWFPAINSRMGCPSEGGP*MDCPPR
Trigger: TCTGGGAGGACAGTCCATCCATGGGCCGCCCTCGGA...GGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 90 bp GTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTTaGGCCAGCATTGACATGGGGCTCTCTGCCTGGAGAAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: VGIPGPVLPPILLRA*ASIDMGLSAWRRRL
Trigger: CAGCCTCCTTCTCCAGGCAGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR TCA 90 bp AAGGGAAACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACCCGCCCCATTCTGCATaGCTATGCCAGGCCCCCATG +
Preference number: 2 (lower is better)
Translates to: KGNFHLRLGSFSYGQPWHPPHSA*LCQAPM
Trigger: CATGGGGGCCTGGCATAGTCATGCAGAATGGGGCGG...GTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTTTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATCTTTGGGGCTGCCTGTaGCATCAAGCTGCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHLWGCL*HQAAPS
Trigger: GCTGGGGGCAGCTTGATGGCACAGGCAGCCCCAAAG...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATAGGGCGGCCCATGGATaGACTGTCCTCCCAGACCTC +
Preference number: 2 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHRAAHG*TVLPDL
Trigger: GAGGTCTGGGAGGACAGTCCATCCATGGGCCGCCCT...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR TCA 90 bp CCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCACTCCGCCCCATTCTGCATaGCTATGCCAGGCCCCCATG +
Preference number: 2 (lower is better)
Translates to: PGTILSVTAALLPGPYLTPPHSA*LCQAPM
Trigger: CATGGGGGCCTGGCATAGTCATGCAGAATGGGGCGG...AGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCGAGAAGGGTGGAACCTaGCACCTCCTCACCTTCCTG +
Preference number: 2 (lower is better)
Translates to: CHQVTATLGFRMATFPRAEKGGT*HLLTFL
Trigger: CAGGAAGGTGAGGAGGTGGCAGGTTCCACCCTTCTC...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp AGAGGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGATGGCCAGCATTGACATaGGGCTCTCTGCCTGGAGAA +
Preference number: 2 (lower is better)
Translates to: RGTPVGIPGPVLPPILLRWPALT*GSLPGE
Trigger: TTCTCCAGGCAGAGAGCCCCATGTCAATGCTGGCCA...TCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR TCA 90 bp ACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTAGAAGGAGGCTGGCATTaGGTGGGCTGTGGGGGCGCA +
Preference number: 2 (lower is better)
Translates to: TYAWAHSPMANPGTILSVEGGWH*VGCGGA
Trigger: TGCGCCCCCACAGCCCACTCAATGCCAGCCTCCTTC...TACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp AAGGGAAACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACGAGAAGGGTGGAACCTaGCACCTCCTCACCTTCCTG +
Preference number: 2 (lower is better)
Translates to: KGNFHLRLGSFSYGQPWHEKGGT*HLLTFL
Trigger: CAGGAAGGTGAGGAGGTGGCAGGTTCCACCCTTCTC...GTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTTTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp CTCACAGCCAACTTACCAACTTCTCATGGTAAGACAGCCAGAGAGCTGGGCTCCGGTAGGAGTGGAAGCTaGCTCAGGGCTCATCCAGTC +
Preference number: 2 (lower is better)
Translates to: LTANLPTSHGKTARELGSGRSGS*LRAHPV
Trigger: GACTGGATGAGCCCTGAGCCAGCTTCCACTCCTACC...GGAGCCCAGCTCTCTGGCTGTCTTACCATGAGAAGTTGGTAAGTTGGCTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp GTTCTACCTCCAATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTCCCAGACCTCCCAGGTaGCTCATCAGTGGTGGGATT +
Preference number: 2 (lower is better)
Translates to: VLPPILLRALASIDMGLSPRPPR*LISGGI
Trigger: AATCCCACCACTGATGAGCCACCTGGGAGGTCTGGG...AGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp CTGAGTCCCAAGGCATTGGCATTGTCCCGCCCCATTCTGCATGACTATGCCAGGCTATCAACAGCAGAATaGGCTGTCCCAGGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: LSPKALALSRPILHDYARLSTAE*AVPGLL
Trigger: AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAG...CCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR TCA 90 bp AACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCGCACTCAGCCCTGTCTaGGTCCCAAGGCATTGGCAT +
Preference number: 2 (lower is better)
Translates to: NPGTILSVTAALLPGPYLALSPV*VPRHWH
Trigger: ATGCCAATGCCTTGGGACTCAGACAGGGCTGAGTGC...GAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR TCA 90 bp TCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGAGCTTTGGCCAGCATTaGCATGGGGCTCTCTGCCTG +
Preference number: 2 (lower is better)
Translates to: SYGQPWHYIVSNCCTPSRSFGQH*HGALCL
Trigger: CAGGCAGAGAGCCCCATGTCAATGCTGGCCAAAGCT...CCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR TCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCTACCTCCAATCCTCCTaGGAGCTTTGGCCAGCATTG +
Preference number: 2 (lower is better)
Translates to: CHQVTATLGFRMATFPRAYLQSS*ELWPAL
Trigger: CAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTA...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp ACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGCGCACCCCTCAGCAGTaGCTGGGCTCACCTCTCCAC +
Preference number: 2 (lower is better)
Translates to: TQRTHMFSATPDQSLKVKRTPQQ*LGSPLH
Trigger: GTGGAGAGGTGAGCCCAGGCACTGCTGAGGGGTGCG...CTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATTCCCTAGGGCCACTCTaGTACTCCCTAGGAGGAGTT +
Preference number: 2 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHSLGPL*YSLGGV
Trigger: AACTCCTCCTAGGGAGTAGCAGAGTGGCCCTAGGGA...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp CCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCAGCCCATTCTACTGTTaGGCACCTCCAATGGTCAGC +
Preference number: 2 (lower is better)
Translates to: PLSPSRWFPAINSRMGCPSPFYC*APPMVS
Trigger: GCTGACCATTGGAGGTGCCCAACAGTAGAATGGGCT...GGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp CTCACAGCCAACTTACCAACTTCTCATGGTAAGACAGCCAGAGAGCTGGGCTCCTTGGGCGGAAGGGATTaGGAAACCCACACAAGGGAC +
Preference number: 2 (lower is better)
Translates to: LTANLPTSHGKTARELGSLGGRD*ETHTRD
Trigger: GTCCCTTGTGTGGGTTTCCCAATCCCTTCCGCCCAA...GGAGCCCAGCTCTCTGGCTGTCTTACCATGAGAAGTTGGTAAGTTGGCTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp ACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTAGCATTGAGTGGGCTGTaGGGGCGCAGTGCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: TYAWAHSPMANPGTILSVALSGL*GRSAEA
Trigger: TGCCTCTGCACTGCGCCCCCACAGCCCACTCAATGC...TACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp AAGGGAAACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACAAGAGGCACCCCTGTTaGCATACCAGGGCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: KGNFHLRLGSFSYGQPWHKRHPC*HTRASS
Trigger: AGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCTT...GTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 90 bp ACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATaGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCACTGGG +
Preference number: 2 (lower is better)
Translates to: TYAWAHSPMANPGTI*SVTAALLPGPYLTG
Trigger: CCCAGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR TCA 90 bp AACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCCTGATGCCCCCAGGATaGGCATTATTGGGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: NPGTILSVTAALLPGPYLLMPPG*ALLGEH
Trigger: GTGCTCTCCCAATAATGCTCATCCTGGGGGCATCAG...GAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp AACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTTGTCCCGCCCCATTCTaGATGACTATGCCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: NFHLRLGSFSYGQPWHYICPAPF*MTMPGP
Trigger: GGGGCCTGGCATAGTCATGCAGAATGGGGCGGGACA...AATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp ACATCTACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAACAGGTGGCTCATCAGTaGTGGGATTGCGGCGCAGCG +
Preference number: 2 (lower is better)
Translates to: TSTQRTHMFSATPDQSLKQVAHQ*WDCGAA
Trigger: CGCTGCGCCGCAATCCCACCACTGATGAGCCACCTG...TTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGTAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp GCTGGGCTCCATGTGTCCCAGGAAAGCCTTGGGCGGAAGGGATTGGGAAACCCACATTTCCAGGCTGTTTaGCACACAGAGACATCAAAA +
Preference number: 2 (lower is better)
Translates to: AGLHVSQESLGRKGLGNPHFQAV*HTETSK
Trigger: TTTTGATGTCTCTGTGTGCCAAACAGCCTGGAAATG...TGGGTTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACACATGGAGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCTTGTCTCCCAGCAGGTaGTTTCCTGCTATCAACAGC +
Preference number: 2 (lower is better)
Translates to: CHQVTATLGFRMATFPRALSPSR*FPAINS
Trigger: GCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAA...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp ACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGGCATTGAGTGGGCTGTaGGGGCGCAGTGCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: TQRTHMFSATPDQSLKVKALSGL*GRSAEA
Trigger: TGCCTCTGCACTGCGCCCCCACAGCCCACTCAATGC...CTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATATTGTCAGTAACTGCTaGACTCCTTCCAGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHIVSNC*TPSRAL
Trigger: TAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAAT...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp TGCAGTGAGTTCTCTATTCAGGTAGGAGTGGAAGCTGGCTCAGGGCTCATCCAGGTTGGGCACCTCCAATaGTCAGCATTTTCTTTCCGG +
Preference number: 2 (lower is better)
Translates to: CSEFSIQVGVEAGSGLIQVGHLQ*SAFSFR
Trigger: CCGGAAAGAAAATGCTGACCATTGGAGGTGCCCAAC...CTGGATGAGCCCTGAGCCAGCTTCCACTCCTACCTGAATAGAGAACTCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp GTTCTACCTCCAATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTGTTGGGCACCTCCAATaGTCAGCATTTTCTTTCCGG +
Preference number: 2 (lower is better)
Translates to: VLPPILLRALASIDMGLSVGHLQ*SAFSFR
Trigger: CCGGAAAGAAAATGCTGACCATTGGAGGTGCCCAAC...AGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp AACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCTGTTCCTGGCATCTTTaGGGCTGCCTGTGCCATCAA +
Preference number: 2 (lower is better)
Translates to: NPGTILSVTAALLPGPYLCSWHL*GCLCHQ
Trigger: TTGATGGCACAGGCAGCCCCAAAGATGCCAGGAACA...GAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp AACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGACAGTCCCTGTTCCTaGCATCTTTGGGGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: NFHLRLGSFSYGQPWHYIDSPCS*HLWGCL
Trigger: CAGGCAGCCCCAAAGATGCCAGGAACAGGGACTGTC...AATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATGGGCTCATTCTCCTATaGCCAACCCTGGCACTATAT +
Preference number: 2 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHGLILL*PTLALY
Trigger: ATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCC...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp AACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCCAGCAGGTGGTTTCCTaGTATCAACAGCAGAATGGG +
Preference number: 2 (lower is better)
Translates to: NPGTILSVTAALLPGPYLQQVVS*YQQQNG
Trigger: CCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTG...GAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp ACATCTACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGCTGTGGGGGCGCAGTaGAGAGGCAAAAATCAGGGT +
Preference number: 2 (lower is better)
Translates to: TSTQRTHMFSATPDQSLKAVGAQ*RGKNQG
Trigger: ACCCTGATTTTTGCCTCTGCACTGCGCCCCCACAGC...TTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGTAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp ACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGTGGCATCTTTGGGGCTaGCTGTGCCATCAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: TQRTHMFSATPDQSLKVKWHLWG*LCHQAA
Trigger: GGCAGCTTGATGGCACAGGCAGCCCCAAAGATGCCA...CTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp ACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGGGAAACTTCTTGGGCGGAAGGGATTaGGAAACCCACACAAGGGAC +
Preference number: 2 (lower is better)
Translates to: THMFSATPDQSLKVKGNFLGGRD*ETHTRD
Trigger: GTCCCTTGTGTGGGTTTCCCAATCCCTTCCGCCCAA...GAAGTTTCCCTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp AACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCTTGTCTCCCAGCAGGTaGTTTCCTGCTATCAACAGC +
Preference number: 2 (lower is better)
Translates to: NPGTILSVTAALLPGPYLLSPSR*FPAINS
Trigger: GCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAA...GAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp ATGAGCACTTCTGAAGGCTCATTTCTAGAAGTGGAATTGCCAGGTCACGTGCATGCTGGTAGAGAAGGGTaGAACCTGCCACCTCCTCAC +
Preference number: 2 (lower is better)
Translates to: MSTSEGSFLEVELPGHVHAGREG*NLPPPH
Trigger: GTGAGGAGGTGGCAGGTTCCACCCTTCTCTACCAGC...ATGCACGTGACCTGGCAATTCCACTTCTAGAAATGAGCCTTCAGAAGTGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp AACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTAAGAGGCACCCCTGTTaGCATACCAGGGCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: NFHLRLGSFSYGQPWHYIKRHPC*HTRASS
Trigger: AGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCTT...AATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp AACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTAGCCCATTCTACTGTTaGGCACCTCCAATGGTCAGC +
Preference number: 2 (lower is better)
Translates to: NFHLRLGSFSYGQPWHYISPFYC*APPMVS
Trigger: GCTGACCATTGGAGGTGCCCAACAGTAGAATGGGCT...AATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp ACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGGGAAACTTCAGGCAAAAATCAGGGTaGAGGCACTCAGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: THMFSATPDQSLKVKGNFRQKSG*RHSALS
Trigger: AGACAGGGCTGAGTGCCTCCACCCTGATTTTTGCCT...GAAGTTTCCCTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 90 bp ACCCCTGACCAATCCCTGAAAGTAAAGGGAAACTTCCACTTACGCTaGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGT +
Preference number: 2 (lower is better)
Translates to: TPDQSLKVKGNFHLR*GSFSYGQPWHYIVS
Trigger: ACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTTTCCCTTTACTTTCAGGGATTGGTCAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp AAGGGAAACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACCATTTCCAGGCTGTTTaGCACACAGAGACATCAAAA +
Preference number: 2 (lower is better)
Translates to: KGNFHLRLGSFSYGQPWHHFQAV*HTETSK
Trigger: TTTTGATGTCTCTGTGTGCCAAACAGCCTGGAAATG...GTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTTTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp ACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGCTATCAACAGCAGAATaGGCTGTCCCAGGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: TQRTHMFSATPDQSLKVKLSTAE*AVPGLL
Trigger: AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAG...CTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp ATGAGCACTTCTGAAGGCTCATTTCTAGAAGTGGAATTGCCAGGTCACGTGCATAGGCAAAAATCAGGGTaGAGGCACTCAGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: MSTSEGSFLEVELPGHVHRQKSG*RHSALS
Trigger: AGACAGGGCTGAGTGCCTCCACCCTGATTTTTGCCT...ATGCACGTGACCTGGCAATTCCACTTCTAGAAATGAGCCTTCAGAAGTGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp ATGAGCACTTCTGAAGGCTCATTTCTAGAAGTGGAATTGCCAGGTCACGTGCATACTTCCACTTACGCTTaGGCTCATTCTCCTATGGCC +
Preference number: 2 (lower is better)
Translates to: MSTSEGSFLEVELPGHVHTSTYA*AHSPMA
Trigger: GGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGT...ATGCACGTGACCTGGCAATTCCACTTCTAGAAATGAGCCTTCAGAAGTGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR TCA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATATCAGTAACATTCAGTaGGGACATGTGTTTATCATG +
Preference number: 2 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHISNIQ*GHVFIM
Trigger: CATGATAAACACATGTCCTCACTGAATGTTACTGAT...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR GCA 90 bp ACATCTACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAATATATTGTCAGTAACTaGTGCACTCCTTCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: TSTQRTHMFSATPDQSLKYIVSN*CTPSRA
Trigger: GGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATA...TTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CCA 90 bp ACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGGGAAACTTCCAGGATGAGCATTATTaGGAGAGCACTAAAAGAGGC +
Preference number: 2 (lower is better)
Translates to: THMFSATPDQSLKVKGNFQDEHY*ESTKRG
Trigger: GCCTCTTTTAGTGCTCTCCCAATAATGCTCATCCTG...GAAGTTTCCCTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR TCA 90 bp ACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGATCAGTAACATTCAGTaGGGACATGTGTTTATCATG +
Preference number: 2 (lower is better)
Translates to: TQRTHMFSATPDQSLKVKISNIQ*GHVFIM
Trigger: CATGATAAACACATGTCCTCACTGAATGTTACTGAT...CTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp CTGTCCTCCCAGACCTCCCAGGTGGCTCATCAGTGGTaGGATTGCGGCGCAGCGACCCCATCACCGCACCCC +
Preference number: 3 (lower is better)
Translates to: LSSQTSQVAHQW*DCGAATPSPHP
Trigger: GGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTGGGAGGTCTGGGAGGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR GCA 72 bp TCCCAGACCTCCCAGGTGGCTCATCAGTGGTGGGATTaGGGCGCAGCGACCCCATCACCGCACCCCTCAGCA +
Preference number: 3 (lower is better)
Translates to: SQTSQVAHQWWD*GAATPSPHPSA
Trigger: TGCTGAGGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTGGGAGGTCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp GGACTGTCCTCCCAGACCTCCCAGGTGGCTCATCAGTaGTGGGATTGCGGCGCAGCGACCCCATCACCGCAC +
Preference number: 3 (lower is better)
Translates to: GLSSQTSQVAHQ*WDCGAATPSPH
Trigger: GTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTGGGAGGTCTGGGAGGACAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp AACCCACACCCGGACAGTCCCTGTTCCTGGCATCTTTaGGGCTGCCTGTGCCATCAAGCTGCCCCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: NPHPDSPCSWHL*GCLCHQAAPSS
Trigger: AGAGCTGGGGGCAGCTTGATGGCACAGGCAGCCCCAAAGATGCCAGGAACAGGGACTGTCCGGGTGTGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp CTCACTGGGAACCCACACCCGGACAGTCCCTGTTCCTaGCATCTTTGGGGCTGCCTGTGCCATCAAGCTGCC +
Preference number: 3 (lower is better)
Translates to: LTGNPHPDSPCS*HLWGCLCHQAA
Trigger: GGCAGCTTGATGGCACAGGCAGCCCCAAAGATGCCAGGAACAGGGACTGTCCGGGTGTGGGTTCCCAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp TCTAGAACAAGCCTCTCTCCGAGGGCGGCCCATGGATaGACTGTCCTCCCAGACCTCCCAGGTGGCTCATCA +
Preference number: 3 (lower is better)
Translates to: SRTSLSPRAAHG*TVLPDLPGGSS
Trigger: TGATGAGCCACCTGGGAGGTCTGGGAGGACAGTCCATCCATGGGCCGCCCTCGGAGAGAGGCTTGTTCTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp GGCTGTGGGGGCGCAGTGCAGAGGCAAAAATCAGGGTaGAGGCACTCAGCCCTGTCTGAGTCCCAAGGCATT +
Preference number: 3 (lower is better)
Translates to: GCGGAVQRQKSG*RHSALSESQGI
Trigger: AATGCCTTGGGACTCAGACAGGGCTGAGTGCCTCCACCCTGATTTTTGCCTCTGCACTGCGCCCCCACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CAA 90 bp CCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCAGGGCTGCTTTCATCAGTGGTGGGATaGCGGCGCAGCGACCCCATC +
Preference number: 3 (lower is better)
Translates to: PAGGFLLSTAEWAVPGLLSSVVG*RRSDPI
Trigger: GATGGGGTCGCTGCGCCGCAATCCCACCACTGATGA...AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp CTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATaGGCTGTCCCAGGGCTGCTTCCTGGATCCAACCCC +
Preference number: 3 (lower is better)
Translates to: LPAGGFLLSTAE*AVPGLLPGSNP
Trigger: GGGGTTGGATCCAGGAAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp TCCATGTGTCCCAGGAAAGCCTTGGGCGGAAGGGATTaGGAAACCCACACAAGGGACACGCGTACCCCATTT +
Preference number: 3 (lower is better)
Translates to: SMCPRKALGGRD*ETHTRDTRTPF
Trigger: AAATGGGGTACGCGTGTCCCTTGTGTGGGTTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACACATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CAA 90 bp GTTCTACCTCCAATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTTGTCCCAGGAAAGCCTaGGGCGGAAGGGATTGGGAA +
Preference number: 3 (lower is better)
Translates to: VLPPILLRALASIDMGLSCPRKA*GGRDWE
Trigger: TTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACA...AGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CAA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATCCCAAGGCATTGGCATaGTCCCGCCCCATTCTGCAT +
Preference number: 3 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHPKALA*SRPILH
Trigger: ATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGG...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR TCA 72 bp TTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTaGGAGCTTTGGCCAGCATTGACATGGGGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: LAYQGQFYLQSS*ELWPALTWGSL
Trigger: CAGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CAA 90 bp ACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTATCATCAGTGGTGGGATaGCGGCGCAGCGACCCCATC +
Preference number: 3 (lower is better)
Translates to: TYAWAHSPMANPGTILSVSSVVG*RRSDPI
Trigger: GATGGGGTCGCTGCGCCGCAATCCCACCACTGATGA...TACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CAA 90 bp CCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCACTCCCAAGGCATTGGCATaGTCCCGCCCCATTCTGCAT +
Preference number: 3 (lower is better)
Translates to: PGTILSVTAALLPGPYLTPKALA*SRPILH
Trigger: ATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGG...AGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CAA 90 bp AACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCGAGCTTTGGCCAGCATaGACATGGGGCTCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: NPGTILSVTAALLPGPYLELWPA*TWGSLP
Trigger: AGGCAGAGAGCCCCATGTCAATGCTGGCCAAAGCTC...GAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR GCA 72 bp TATGGCCAACCCTGGCACTATATTGTCAGTAACTGCTaGACTCCTTCCAGGGCCCTATCTCACTGGGAACCC +
Preference number: 3 (lower is better)
Translates to: YGQPWHYIVSNC*TPSRALSHWEP
Trigger: GGGTTCCCAGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR GCA 72 bp TCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTaGTGCACTCCTTCCAGGGCCCTATCTCACTGGGAA +
Preference number: 3 (lower is better)
Translates to: SYGQPWHYIVSN*CTPSRALSHWE
Trigger: TTCCCAGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CAA 90 bp GGGCTGCTTCCTGGATCCAACCCCCTCACAGCCAACTTACCAACTTCTCATGGTCCATTTCCAGGCTGTTaGGCACACAGAGACATCAAA +
Preference number: 3 (lower is better)
Translates to: GLLPGSNPLTANLPTSHGPFPGC*AHRDIK
Trigger: TTTGATGTCTCTGTGTGCCAAACAGCCTGGAAATGG...ACCATGAGAAGTTGGTAAGTTGGCTGTGAGGGGGTTGGATCCAGGAAGCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CAA 90 bp ACATCTACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAACTTGGGCGGAAGGGATaGGGAAACCCACACAAGGGA +
Preference number: 3 (lower is better)
Translates to: TSTQRTHMFSATPDQSLKLGRKG*GNPHKG
Trigger: TCCCTTGTGTGGGTTTCCCAATCCCTTCCGCCCAAG...TTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGTAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR TCA 72 bp CCAAGCCCATTTCTCAACATCCTCCTGCTATCACGGTaGGGGCAACATCAGCTGCAGGACTTCTCTAATTGG +
Preference number: 3 (lower is better)
Translates to: PSPFLNILLLSR*GQHQLQDFSNW
Trigger: CCAATTAGAGAAGTCCTGCAGCTGATGTTGCCCTCACCGTGATAGCAGGAGGATGTTGAGAAATGGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp CTCACAGTAGCCCATTCTACTGTTGGGCACCTCCAATaGTCAGCATTTTCTTTCCGGCAGCCTCTTTCTTGG +
Preference number: 3 (lower is better)
Translates to: LTVAHSTVGHLQ*SAFSFRQPLSW
Trigger: CCAAGAAAGAGGCTGCCGGAAAGAAAATGCTGACCATTGGAGGTGCCCAACAGTAGAATGGGCTACTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp GCTCTTACTACCCCTCACAGTAGCCCATTCTACTGTTaGGCACCTCCAATGGTCAGCATTTTCTTTCCGGCA +
Preference number: 3 (lower is better)
Translates to: ALTTPHSSPFYC*APPMVSIFFPA
Trigger: TGCCGGAAAGAAAATGCTGACCATTGGAGGTGCCCAACAGTAGAATGGGCTACTGTGAGGGGTAGTAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp CACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTaGCACTATATTGTCAGTAACTGCTGCACTCCTTCC +
Preference number: 3 (lower is better)
Translates to: HLRLGSFSYGQP*HYIVSNCCTPS
Trigger: GGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR GCA 72 bp ACATCCTCCTGCTATCACGGTGAGGGCAACATCAGCTaGAGGACTTCTCTAATTGGAACTAGCCACATCTAC +
Preference number: 3 (lower is better)
Translates to: TSSCYHGEGNIS*RTSLIGTSHIY
Trigger: GTAGATGTGGCTAGTTCCAATTAGAGAAGTCCTGCAGCTGATGTTGCCCTCACCGTGATAGCAGGAGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CAA 90 bp ACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGAACTTCCACTTACGCTaGGGCTCATTCTCCTATGGC +
Preference number: 3 (lower is better)
Translates to: TQRTHMFSATPDQSLKVKNFHLR*GSFSYG
Trigger: GCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT...CTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CAA 90 bp ACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGCCATTTCCAGGCTGTTaGGCACACAGAGACATCAAA +
Preference number: 3 (lower is better)
Translates to: TQRTHMFSATPDQSLKVKPFPGC*AHRDIK
Trigger: TTTGATGTCTCTGTGTGCCAAACAGCCTGGAAATGG...CTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR-3UTR CAA 90 bp ACATCTACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAAACCCTGGCACTATATaGTCAGTAACTGCTGCACTC +
Preference number: 3 (lower is better)
Translates to: TSTQRTHMFSATPDQSLKNPGTI*SVTAAL
Trigger: GAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT...TTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGTAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CCA 72 bp CACAGGTATAGAAGTGCCCTGATAAAATCTCAGAGCTaGCTGTCCAGTCAAGATTTGCATACCTCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: HRYRSALIKSQS*LSSQDLHTSRN
Trigger: ATTTCTGGAGGTATGCAAATCTTGACTGGACAGCCAGCTCTGAGATTTTATCAGGGCACTTCTATACCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 72 bp CTCCCAGACCTCCCAGGTGGCTCATCAGTGGTGGGATaGCGGCGCAGCGACCCCATCACCGCACCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LPDLPGGSSVVG*RRSDPITAPLS
Trigger: GCTGAGGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTGGGAGGTCTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CAGGTGGCTCATCAGTGGTGGGATTGCGGCGCAGCGACCCCATCACCGCACCCCTGGCTCTGTGGGAGTTaGGCCCAGGCTGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QVAHQWWDCGAATPSPHPWLCGS*AQAGLQ
Trigger: CTGAAGCCCAGCCTGGGCCCAACTCCCACAGAGCCA...GGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp CAGGTGGCTCATCAGTGGTGGGATTGCGGCGCAGCGACCCCATCACCGCACCCCCACTCCCACCAAGGATaGCCAGAAGAGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: QVAHQWWDCGAATPSPHPHSHQG*PEEPQR
Trigger: CCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTG...GGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 72 bp GAACCCACACCCGGACAGTCCCTGTTCCTGGCATCTTaGGGGCTGCCTGTGCCATCAAGCTGCCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EPTPGQSLFLAS*GLPVPSSCPQL
Trigger: GAGCTGGGGGCAGCTTGATGGCACAGGCAGCCCCAAAGATGCCAGGAACAGGGACTGTCCGGGTGTGGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp CAGGTGGCTCATCAGTGGTGGGATTGCGGCGCAGCGACCCCATCACCGCACCCCTGGGGCAGGCAAGGATaGGACCACATTTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: QVAHQWWDCGAATPSPHPWGRQG*DHIWLQ
Trigger: TTGCAGCCAAATGTGGTCTCATCCTTGCCTGCCCCA...GGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CAGGTGGCTCATCAGTGGTGGGATTGCGGCGCAGCGACCCCATCACCGCACCCCTTGGGCGGAAGGGATTaGGAAACCCACACAAGGGAC +
Preference number: 4 (lower is better)
Translates to: QVAHQWWDCGAATPSPHPLGGRD*ETHTRD
Trigger: GTCCCTTGTGTGGGTTTCCCAATCCCTTCCGCCCAA...GGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCAGGGCTGCTTCCCCCGGCAATCCACTaGGCTGTCTGGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PAGGFLLSTAEWAVPGLLPPAIH*AVWLRL
Trigger: GAGCCGGAGCCAGACAGCCCAGTGGATTGCCGGGGG...AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GCTGGGCTCCATGTGTCCCAGGAAAGCCTTGGGCGGAAGGGATTGGGAAACCCAGCATTGAGTGGGCTGTaGGGGCGCAGTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AGLHVSQESLGRKGLGNPALSGL*GRSAEA
Trigger: TGCCTCTGCACTGCGCCCCCACAGCCCACTCAATGC...TGGGTTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACACATGGAGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCCCCAGCTCTGCCACCTaGCTGCGTCCTGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: CHQVTATLGFRMATFPRAPSSAT*LRPDAP
Trigger: GGGGGCATCAGGACGCAGGCAGGTGGCAGAGCTGGG...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CAGGTGGCTCATCAGTGGTGGGATTGCGGCGCAGCGACCCCATCACCGCACCCCGTTGGGCACCTCCAATaGTCAGCATTTTCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: QVAHQWWDCGAATPSPHPVGHLQ*SAFSFR
Trigger: CCGGAAAGAAAATGCTGACCATTGGAGGTGCCCAAC...GGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CTGAGTCCCAAGGCATTGGCATTGTCCCGCCCCATTCTGCATGACTATGCCAGGCCCCTCAGCAGTGCCTaGGCTCACCTCTCCACCCAC +
Preference number: 4 (lower is better)
Translates to: LSPKALALSRPILHDYARPLSSA*AHLSTH
Trigger: GTGGGTGGAGAGGTGAGCCCAGGCACTGCTGAGGGG...CCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTGTGGCTCATCAGTGGTaGGATTGCGGCGCAGCGACC +
Preference number: 4 (lower is better)
Translates to: GTPVGIPGPVLPPILLRAVAHQW*DCGAAT
Trigger: GGTCGCTGCGCCGCAATCCCACCACTGATGAGCCAC...AGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CTGAGTCCCAAGGCATTGGCATTGTCCCGCCCCATTCTGCATGACTATGCCAGGGAGGCTGGCATTGAGTaGGCTGTGGGGGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LSPKALALSRPILHDYAREAGIE*AVGAQC
Trigger: GCACTGCGCCCCCACAGCCCACTCAATGCCAGCCTC...CCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 72 bp GGCACTCAGCCCTGTCTGAGTCCCAAGGCATTGGCATaGTCCCGCCCCATTCTGCATGACTATGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GTQPCLSPKALA*SRPILHDYARP
Trigger: GGGCCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAGACAGGGCTGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp CAGGTGGCTCATCAGTGGTGGGATTGCGGCGCAGCGACCCCATCACCGCACCCCTTGTCAATGCCCCTCTaGTCCCCGGTATATTCTTCA +
Preference number: 4 (lower is better)
Translates to: QVAHQWWDCGAATPSPHPLSMPL*SPVYSS
Trigger: TGAAGAATATACCGGGGATCAGAGGGGCATTGACAA...GGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp GCTGGGCTCCATGTGTCCCAGGAAAGCCTTGGGCGGAAGGGATTGGGAAACCCAGCACTCAGCCCTGTCTaGGTCCCAAGGCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: AGLHVSQESLGRKGLGNPALSPV*VPRHWH
Trigger: ATGCCAATGCCTTGGGACTCAGACAGGGCTGAGTGC...TGGGTTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACACATGGAGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCGAAGGAGGCTGGCATTaGGTGGGCTGTGGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: CHQVTATLGFRMATFPRAEGGWH*VGCGGA
Trigger: TGCGCCCCCACAGCCCACTCAATGCCAGCCTCCTTC...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCCGCACCCCTCAGCAGTaGCTGGGCTCACCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PLSPSRWFPAINSRMGCPRTPQQ*LGSPLH
Trigger: GTGGAGAGGTGAGCCCAGGCACTGCTGAGGGGTGCG...GGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp ATTCCAGGGTGGGGCCGTTCAAGGTCTCCTAAAGCCCCACTCCACGGATGCCCATTGGCTGCAATCTTTTaGGGGCCAGCCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: IPGWGRSRSPKAPLHGCPLAAIF*GPASRL
Trigger: CAGCCTGCTGGCTGGCCCCCAAAAGATTGCAGCCAA...TGGGCATCCGTGGAGTGGGGCTTTAGGAGACCTTGAACGGCCCCACCCTGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp ATTCCAGGGTGGGGCCGTTCAAGGTCTCCTAAAGCCCCACTCCACGGATGCCCAATCCACTGGGCTGTCTaGCTCCGGCTCTCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: IPGWGRSRSPKAPLHGCPIHWAV*LRLSAV
Trigger: AACTGCAGAGAGCCGGAGCCAGACAGCCCAGTGGAT...TGGGCATCCGTGGAGTGGGGCTTTAGGAGACCTTGAACGGCCCCACCCTGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp AGAGGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGTGGCTCATCAGTGGTaGGATTGCGGCGCAGCGACC +
Preference number: 4 (lower is better)
Translates to: RGTPVGIPGPVLPPILLRVAHQW*DCGAAT
Trigger: GGTCGCTGCGCCGCAATCCCACCACTGATGAGCCAC...TCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GCTGGGCTCCATGTGTCCCAGGAAAGCCTTGGGCGGAAGGGATTGGGAAACCCACCCAGACCTCCCAGGTaGCTCATCAGTGGTGGGATT +
Preference number: 4 (lower is better)
Translates to: AGLHVSQESLGRKGLGNPPRPPR*LISGGI
Trigger: AATCCCACCACTGATGAGCCACCTGGGAGGTCTGGG...TGGGTTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACACATGGAGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GGAAACCCACACAAGGGACACGCGTACCCCATTTCCAGGCTGTTTGGCACACAGAGGGCGGCCCATGGATaGACTGTCCTCCCAGACCTC +
Preference number: 4 (lower is better)
Translates to: GNPHKGHAYPISRLFGTQRAAHG*TVLPDL
Trigger: GAGGTCTGGGAGGACAGTCCATCCATGGGCCGCCCT...CTGTGTGCCAAACAGCCTGGAAATGGGGTACGCGTGTCCCTTGTGTGGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp CCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCCCGCCCCATTCTGCATaGCTATGCCAGGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: PLSPSRWFPAINSRMGCPPPHSA*LCQAPM
Trigger: CATGGGGGCCTGGCATAGTCATGCAGAATGGGGCGG...GGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp TATTCAGGTAGGAGTGGAAGCTGGCTCAGGGCTCATCCAGTCCAATGTCCCACAGAAGGAGGCTGGCATTaGGTGGGCTGTGGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: YSGRSGSWLRAHPVQCPTEGGWH*VGCGGA
Trigger: TGCGCCCCCACAGCCCACTCAATGCCAGCCTCCTTC...TGTGGGACATTGGACTGGATGAGCCCTGAGCCAGCTTCCACTCCTACCTGAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp GCTGGGCTCCATGTGTCCCAGGAAAGCCTTGGGCGGAAGGGATTGGGAAACCCACTGATGCCCCCAGGATaGGCATTATTGGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: AGLHVSQESLGRKGLGNPLMPPG*ALLGEH
Trigger: GTGCTCTCCCAATAATGCTCATCCTGGGGGCATCAG...TGGGTTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACACATGGAGCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp GGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTGAGAAGGGTGGAACCTaGCACCTCCTCACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GTPVGIPGPVLPPILLRAEKGGT*HLLTFL
Trigger: CAGGAAGGTGAGGAGGTGGCAGGTTCCACCCTTCTC...AGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GCTGGGCTCCATGTGTCCCAGGAAAGCCTTGGGCGGAAGGGATTGGGAAACCCAAAGAGGCACCCCTGTTaGCATACCAGGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AGLHVSQESLGRKGLGNPKRHPC*HTRASS
Trigger: AGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCTT...TGGGTTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACACATGGAGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTGACAGTCCCTGTTCCTaGCATCTTTGGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GTPVGIPGPVLPPILLRADSPCS*HLWGCL
Trigger: CAGGCAGCCCCAAAGATGCCAGGAACAGGGACTGTC...AGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp CCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCAGGGCTGCTTTGGGTCGAACCCCAGTaGAGACTCTTCTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: PAGGFLLSTAEWAVPGLLWVEPQ*RLFSPR
Trigger: CCTAGGGGAGAAGAGTCTTCACTGGGGTTCGACCCA...AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp TATTCAGGTAGGAGTGGAAGCTGGCTCAGGGCTCATCCAGTCCAATGTCCCACACCGCCCCATTCTGCATaGCTATGCCAGGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: YSGRSGSWLRAHPVQCPTPPHSA*LCQAPM
Trigger: CATGGGGGCCTGGCATAGTCATGCAGAATGGGGCGG...TGTGGGACATTGGACTGGATGAGCCCTGAGCCAGCTTCCACTCCTACCTGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp CTGAGTCCCAAGGCATTGGCATTGTCCCGCCCCATTCTGCATGACTATGCCAGGAGCTTTGGCCAGCATTaGCATGGGGCTCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSPKALALSRPILHDYARSFGQH*HGALCL
Trigger: CAGGCAGAGAGCCCCATGTCAATGCTGGCCAAAGCT...CCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp AGAGGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAAGCTTTGGCCAGCATTaGCATGGGGCTCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RGTPVGIPGPVLPPILLRSFGQH*HGALCL
Trigger: CAGGCAGAGAGCCCCATGTCAATGCTGGCCAAAGCT...TCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp AGAGGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGACTGGCTCCGGCTCTCTaGAGTTGCGACAGAAGCACT +
Preference number: 4 (lower is better)
Translates to: RGTPVGIPGPVLPPILLRLAPAL*SCDRST
Trigger: AGTGCTTCTGTCGCAACTGCAGAGAGCCGGAGCCAG...TCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCCATCAGTGGTGGGATTaGGGCGCAGCGACCCCATCA +
Preference number: 4 (lower is better)
Translates to: CHQVTATLGFRMATFPRAHQWWD*GAATPS
Trigger: TGATGGGGTCGCTGCGCCGCAATCCCACCACTGATG...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp GGGCTGCTTCCTGGATCCAACCCCCTCACAGCCAACTTACCAACTTCTCATGGTTGTCCCGCCCCATTCTaGATGACTATGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GLLPGSNPLTANLPTSHGCPAPF*MTMPGP
Trigger: GGGGCCTGGCATAGTCATGCAGAATGGGGCGGGACA...ACCATGAGAAGTTGGTAAGTTGGCTGTGAGGGGGTTGGATCCAGGAAGCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp AGAGGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTGTGGGGGCGCAGTaGAGAGGCAAAAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: RGTPVGIPGPVLPPILLRAVGAQ*RGKNQG
Trigger: ACCCTGATTTTTGCCTCTGCACTGCGCCCCCACAGC...TCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp TATTCAGGTAGGAGTGGAAGCTGGCTCAGGGCTCATCCAGTCCAATGTCCCACACTTTGGGGCTGCCTGTaGCATCAAGCTGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: YSGRSGSWLRAHPVQCPTLWGCL*HQAAPS
Trigger: GCTGGGGGCAGCTTGATGGCACAGGCAGCCCCAAAG...TGTGGGACATTGGACTGGATGAGCCCTGAGCCAGCTTCCACTCCTACCTGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCACTCCGGGGACCCAAGCTTaGGACATCCTGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PGTILSVTAALLPGPYLTPGTQA*DILAWG
Trigger: CCCCCAAGCCAGGATGTCCCAAGCTTGGGTCCCCGG...AGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CTGAGTCCCAAGGCATTGGCATTGTCCCGCCCCATTCTGCATGACTATGCCAGGGAGTTGGGCCCAGGCTaGGCTTCAGAATCACCTCAC +
Preference number: 4 (lower is better)
Translates to: LSPKALALSRPILHDYARELGPG*ASESPH
Trigger: GTGAGGTGATTCTGAAGCCCAGCCTGGGCCCAACTC...CCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp TATTCAGGTAGGAGTGGAAGCTGGCTCAGGGCTCATCCAGTCCAATGTCCCACATGGCTCTGTGGGAGTTaGGCCCAGGCTGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: YSGRSGSWLRAHPVQCPTWLCGS*AQAGLQ
Trigger: CTGAAGCCCAGCCTGGGCCCAACTCCCACAGAGCCA...TGTGGGACATTGGACTGGATGAGCCCTGAGCCAGCTTCCACTCCTACCTGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CTCACAGCCAACTTACCAACTTCTCATGGTAAGACAGCCAGAGAGCTGGGCTCCCAGGTGGCTCATCAGTaGTGGGATTGCGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: LTANLPTSHGKTARELGSQVAHQ*WDCGAA
Trigger: CGCTGCGCCGCAATCCCACCACTGATGAGCCACCTG...GGAGCCCAGCTCTCTGGCTGTCTTACCATGAGAAGTTGGTAAGTTGGCTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CTGAGTCCCAAGGCATTGGCATTGTCCCGCCCCATTCTGCATGACTATGCCAGGCCCAGACCTCCCAGGTaGCTCATCAGTGGTGGGATT +
Preference number: 4 (lower is better)
Translates to: LSPKALALSRPILHDYARPRPPR*LISGGI
Trigger: AATCCCACCACTGATGAGCCACCTGGGAGGTCTGGG...CCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp TATTCAGGTAGGAGTGGAAGCTGGCTCAGGGCTCATCCAGTCCAATGTCCCACATCCGAGGGCGGCCCATaGATGGACTGTCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: YSGRSGSWLRAHPVQCPTSEGGP*MDCPPR
Trigger: TCTGGGAGGACAGTCCATCCATGGGCCGCCCTCGGA...TGTGGGACATTGGACTGGATGAGCCCTGAGCCAGCTTCCACTCCTACCTGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp ATTCCAGGGTGGGGCCGTTCAAGGTCTCCTAAAGCCCCACTCCACGGATGCCCACTATCAACAGCAGAATaGGCTGTCCCAGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: IPGWGRSRSPKAPLHGCPLSTAE*AVPGLL
Trigger: AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAG...TGGGCATCCGTGGAGTGGGGCTTTAGGAGACCTTGAACGGCCCCACCCTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCAGGGCTGCTTGCTGGTAGAGAAGGGTaGAACCTGCCACCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PAGGFLLSTAEWAVPGLLAGREG*NLPPPH
Trigger: GTGAGGAGGTGGCAGGTTCCACCCTTCTCTACCAGC...AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp TGCAGTGAGTTCTCTATTCAGGTAGGAGTGGAAGCTGGCTCAGGGCTCATCCAGGCATTGAGTGGGCTGTaGGGGCGCAGTGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: CSEFSIQVGVEAGSGLIQALSGL*GRSAEA
Trigger: TGCCTCTGCACTGCGCCCCCACAGCCCACTCAATGC...CTGGATGAGCCCTGAGCCAGCTTCCACTCCTACCTGAATAGAGAACTCACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCAGGGCCCTATCTCACTaGGAACCCACACCCGGACAG +
Preference number: 4 (lower is better)
Translates to: CHQVTATLGFRMATFPRARALSH*EPTPGQ
Trigger: CTGTCCGGGTGTGGGTTCCCAGTGAGATAGGGCCCT...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTAAGGAAGGCAACGTCTaGGCCGAGGGTAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: GTPVGIPGPVLPPILLRAKEGNV*AEGNFS
Trigger: GGAGAAGTTACCCTCGGCCCAGACGTTGCCTTCCTT...AGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 72 bp CTCCATGTGTCCCAGGAAAGCCTTGGGCGGAAGGGATaGGGAAACCCACACAAGGGACACGCGTACCCCATT +
Preference number: 4 (lower is better)
Translates to: LHVSQESLGRKG*GNPHKGHAYPI
Trigger: AATGGGGTACGCGTGTCCCTTGTGTGGGTTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACACATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 72 bp CCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTTaGGCCAGCATTGACATGGGGCTCTCTGCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PGPVLPPILLRA*ASIDMGLSAWR
Trigger: TCTCCAGGCAGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp GGAAACCCACACAAGGGACACGCGTACCCCATTTCCAGGCTGTTTGGCACACAGTGGGGCAGGCAAGGATaGGACCACATTTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: GNPHKGHAYPISRLFGTQWGRQG*DHIWLQ
Trigger: TTGCAGCCAAATGTGGTCTCATCCTTGCCTGCCCCA...CTGTGTGCCAAACAGCCTGGAAATGGGGTACGCGTGTCCCTTGTGTGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCGCACTCAGCCCTGTCTaGGTCCCAAGGCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: CHQVTATLGFRMATFPRAALSPV*VPRHWH
Trigger: ATGCCAATGCCTTGGGACTCAGACAGGGCTGAGTGC...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp GGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTTACCTCCAATCCTCCTaGGAGCTTTGGCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: GTPVGIPGPVLPPILLRAYLQSS*ELWPAL
Trigger: CAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTA...AGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp GGAAACCCACACAAGGGACACGCGTACCCCATTTCCAGGCTGTTTGGCACACAGCTGATGCCCCCAGGATaGGCATTATTGGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GNPHKGHAYPISRLFGTQLMPPG*ALLGEH
Trigger: GTGCTCTCCCAATAATGCTCATCCTGGGGGCATCAG...CTGTGTGCCAAACAGCCTGGAAATGGGGTACGCGTGTCCCTTGTGTGGGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCCTCCTGCTATCACGGTaGGGGCAACATCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: CHQVTATLGFRMATFPRALLLSR*GQHQLQ
Trigger: CTGCAGCTGATGTTGCCCTCACCGTGATAGCAGGAG...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp GGGCTGCTTCCTGGATCCAACCCCCTCACAGCCAACTTACCAACTTCTCATGGTGGCCCTCTAGAAAGGTaGCACCATTCCCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: GLLPGSNPLTANLPTSHGGPLER*HHSHSH
Trigger: GTGGGAGTGGGAATGGTGTCACCTTTCTAGAGGGCC...ACCATGAGAAGTTGGTAAGTTGGCTGTGAGGGGGTTGGATCCAGGAAGCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCCTGGCTCCGGCTCTCTaGAGTTGCGACAGAAGCACT +
Preference number: 4 (lower is better)
Translates to: PLSPSRWFPAINSRMGCPLAPAL*SCDRST
Trigger: AGTGCTTCTGTCGCAACTGCAGAGAGCCGGAGCCAG...GGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp ACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGGGAAACTTCCCCAGCTCTGCCACCTaGCTGCGTCCTGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: THMFSATPDQSLKVKGNFPSSAT*LRPDAP
Trigger: GGGGGCATCAGGACGCAGGCAGGTGGCAGAGCTGGG...GAAGTTTCCCTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCCCCGGCAATCCACTaGGCTGTCTGGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: HSPMANPGTILSVTAALLPPAIH*AVWLRL
Trigger: GAGCCGGAGCCAGACAGCCCAGTGGATTGCCGGGGG...AAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp AACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCTCCGAGGGCGGCCCATaGATGGACTGTCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: NPGTILSVTAALLPGPYLSEGGP*MDCPPR
Trigger: TCTGGGAGGACAGTCCATCCATGGGCCGCCCTCGGA...GAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp CTGAGTCCCAAGGCATTGGCATTGTCCCGCCCCATTCTGCATGACTATGCCAGGTACCTCCAATCCTCCTaGGAGCTTTGGCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: LSPKALALSRPILHDYARYLQSS*ELWPAL
Trigger: CAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTA...CCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp GTTCTACCTCCAATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTCTCCTGCTATCACGGTaGGGGCAACATCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VLPPILLRALASIDMGLSLLLSR*GQHQLQ
Trigger: CTGCAGCTGATGTTGCCCTCACCGTGATAGCAGGAG...AGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATGGCCCTCTAGAAAGGTaGCACCATTCCCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHGPLER*HHSHSH
Trigger: GTGGGAGTGGGAATGGTGTCACCTTTCTAGAGGGCC...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp AACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTCGCACCCCTCAGCAGTaGCTGGGCTCACCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: NFHLRLGSFSYGQPWHYIRTPQQ*LGSPLH
Trigger: GTGGAGAGGTGAGCCCAGGCACTGCTGAGGGGTGCG...AATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CCAATGTCCCACAGGTATAGAAGTGCCCTGATAAAATCTCAGAGCTGGCTGTCCCTTTGGGGCTGCCTGTaGCATCAAGCTGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PMSHRYRSALIKSQSWLSLWGCL*HQAAPS
Trigger: GCTGGGGGCAGCTTGATGGCACAGGCAGCCCCAAAG...GGACAGCCAGCTCTGAGATTTTATCAGGGCACTTCTATACCTGTGGGACATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp GGGCTGCTTCCTGGATCCAACCCCCTCACAGCCAACTTACCAACTTCTCATGGTTCCCTAGGGCCACTCTaGTACTCCCTAGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GLLPGSNPLTANLPTSHGSLGPL*YSLGGV
Trigger: AACTCCTCCTAGGGAGTAGCAGAGTGGCCCTAGGGA...ACCATGAGAAGTTGGTAAGTTGGCTGTGAGGGGGTTGGATCCAGGAAGCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp ACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTACCGGGGACCCAAGCTTaGGACATCCTGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TYAWAHSPMANPGTILSVPGTQA*DILAWG
Trigger: CCCCCAAGCCAGGATGTCCCAAGCTTGGGTCCCCGG...TACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp TGCAGTGAGTTCTCTATTCAGGTAGGAGTGGAAGCTGGCTCAGGGCTCATCCAGGAGTTGGGCCCAGGCTaGGCTTCAGAATCACCTCAC +
Preference number: 4 (lower is better)
Translates to: CSEFSIQVGVEAGSGLIQELGPG*ASESPH
Trigger: GTGAGGTGATTCTGAAGCCCAGCCTGGGCCCAACTC...CTGGATGAGCCCTGAGCCAGCTTCCACTCCTACCTGAATAGAGAACTCACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTGTTGGGCACCTCCAATaGTCAGCATTTTCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: GTPVGIPGPVLPPILLRAVGHLQ*SAFSFR
Trigger: CCGGAAAGAAAATGCTGACCATTGGAGGTGCCCAAC...AGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CTGAGTCCCAAGGCATTGGCATTGTCCCGCCCCATTCTGCATGACTATGCCAGGAGCCCATTCTACTGTTaGGCACCTCCAATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LSPKALALSRPILHDYARSPFYC*APPMVS
Trigger: GCTGACCATTGGAGGTGCCCAACAGTAGAATGGGCT...CCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATGGTAGGAGTGGAAGCTaGCTCAGGGCTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHGRSGS*LRAHPV
Trigger: GACTGGATGAGCCCTGAGCCAGCTTCCACTCCTACC...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GTTCTACCTCCAATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTGGTAGGAGTGGAAGCTaGCTCAGGGCTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: VLPPILLRALASIDMGLSGRSGS*LRAHPV
Trigger: GACTGGATGAGCCCTGAGCCAGCTTCCACTCCTACC...AGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp AGAGGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGACTATCAACAGCAGAATaGGCTGTCCCAGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGTPVGIPGPVLPPILLRLSTAE*AVPGLL
Trigger: AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAG...TCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CTCACAGCCAACTTACCAACTTCTCATGGTAAGACAGCCAGAGAGCTGGGCTCCGCTGGTAGAGAAGGGTaGAACCTGCCACCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LTANLPTSHGKTARELGSAGREG*NLPPPH
Trigger: GTGAGGAGGTGGCAGGTTCCACCCTTCTCTACCAGC...GGAGCCCAGCTCTCTGGCTGTCTTACCATGAGAAGTTGGTAAGTTGGCTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GGAAACCCACACAAGGGACACGCGTACCCCATTTCCAGGCTGTTTGGCACACAGAGGCAAAAATCAGGGTaGAGGCACTCAGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GNPHKGHAYPISRLFGTQRQKSG*RHSALS
Trigger: AGACAGGGCTGAGTGCCTCCACCCTGATTTTTGCCT...CTGTGTGCCAAACAGCCTGGAAATGGGGTACGCGTGTCCCTTGTGTGGGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp AACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGAGGCTGGCATTGAGTaGGCTGTGGGGGCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NFHLRLGSFSYGQPWHYIEAGIE*AVGAQC
Trigger: GCACTGCGCCCCCACAGCCCACTCAATGCCAGCCTC...AATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCTGGCCAGCATTGACATaGGGCTCTCTGCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PLSPSRWFPAINSRMGCPWPALT*GSLPGE
Trigger: TTCTCCAGGCAGAGAGCCCCATGTCAATGCTGGCCA...GGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCCCACCCCCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGTGTTCCTGGCATCTTTaGGGCTGCCTGTGCCATCAA +
Preference number: 4 (lower is better)
Translates to: PHPHCLPAGGFLLSTAEWCSWHL*GCLCHQ
Trigger: TTGATGGCACAGGCAGCCCCAAAGATGCCAGGAACA...CCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGGGGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGCTGGGCTCATTCTCCTATaGCCAACCCTGGCACTATAT +
Preference number: 4 (lower is better)
Translates to: GTPVGIPGPVLPPILLRAGLILL*PTLALY
Trigger: ATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCC...AGCTCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CCAATGTCCCACAGGTATAGAAGTGCCCTGATAAAATCTCAGAGCTGGCTGTCCCATCAGTGGTGGGATTaGGGCGCAGCGACCCCATCA +
Preference number: 4 (lower is better)
Translates to: PMSHRYRSALIKSQSWLSHQWWD*GAATPS
Trigger: TGATGGGGTCGCTGCGCCGCAATCCCACCACTGATG...GGACAGCCAGCTCTGAGATTTTATCAGGGCACTTCTATACCTGTGGGACATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCACTGCTGTGGGGGCGCAGTaGAGAGGCAAAAATCAGGGT +
Preference number: 4 (lower is better)
Translates to: PGTILSVTAALLPGPYLTAVGAQ*RGKNQG
Trigger: ACCCTGATTTTTGCCTCTGCACTGCGCCCCCACAGC...AGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCACTTGGCATCTTTGGGGCTaGCTGTGCCATCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PGTILSVTAALLPGPYLTWHLWG*LCHQAA
Trigger: GGCAGCTTGATGGCACAGGCAGCCCCAAAGATGCCA...AGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CTCACAGCCAACTTACCAACTTCTCATGGTAAGACAGCCAGAGAGCTGGGCTCCTCCCTAGGGCCACTCTaGTACTCCCTAGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LTANLPTSHGKTARELGSSLGPL*YSLGGV
Trigger: AACTCCTCCTAGGGAGTAGCAGAGTGGCCCTAGGGA...GGAGCCCAGCTCTCTGGCTGTCTTACCATGAGAAGTTGGTAAGTTGGCTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp TCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGATCCACTGGGCTGTCTaGCTCCGGCTCTCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SYGQPWHYIVSNCCTPSRIHWAV*LRLSAV
Trigger: AACTGCAGAGAGCCGGAGCCAGACAGCCCAGTGGAT...CCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp ACATCTACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAACCCCTCAGCAGTGCCTaGGCTCACCTCTCCACCCAC +
Preference number: 4 (lower is better)
Translates to: TSTQRTHMFSATPDQSLKPLSSA*AHLSTH
Trigger: GTGGGTGGAGAGGTGAGCCCAGGCACTGCTGAGGGG...TTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGTAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CTCACAGCCAACTTACCAACTTCTCATGGTAAGACAGCCAGAGAGCTGGGCTCCGTCCCAGGAAAGCCTTaGGCGGAAGGGATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LTANLPTSHGKTARELGSVPGKP*AEGIGK
Trigger: TTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGAC...GGAGCCCAGCTCTCTGGCTGTCTTACCATGAGAAGTTGGTAAGTTGGCTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CTGAGTCCCAAGGCATTGGCATTGTCCCGCCCCATTCTGCATGACTATGCCAGGTTGTCTCCCAGCAGGTaGTTTCCTGCTATCAACAGC +
Preference number: 4 (lower is better)
Translates to: LSPKALALSRPILHDYARLSPSR*FPAINS
Trigger: GCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAA...CCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp AAGGGAAACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTGGCCAGCATTGACATaGGGCTCTCTGCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: KGNFHLRLGSFSYGQPWHWPALT*GSLPGE
Trigger: TTCTCCAGGCAGAGAGCCCCATGTCAATGCTGGCCA...GTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GCTGGGCTCCATGTGTCCCAGGAAAGCCTTGGGCGGAAGGGATTGGGAAACCCACAGGATGAGCATTATTaGGAGAGCACTAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGLHVSQESLGRKGLGNPQDEHY*ESTKRG
Trigger: GCCTCTTTTAGTGCTCTCCCAATAATGCTCATCCTG...TGGGTTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACACATGGAGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp AACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCGACAGTCCCTGTTCCTaGCATCTTTGGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NPGTILSVTAALLPGPYLDSPCS*HLWGCL
Trigger: CAGGCAGCCCCAAAGATGCCAGGAACAGGGACTGTC...GAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCAATGTCCCACAGGTATAGAAGTGCCCTGATAAAATCTCAGAGCTGGCTGTCCAGGGCCCTATCTCACTaGGAACCCACACCCGGACAG +
Preference number: 4 (lower is better)
Translates to: PMSHRYRSALIKSQSWLSRALSH*EPTPGQ
Trigger: CTGTCCGGGTGTGGGTTCCCAGTGAGATAGGGCCCT...GGACAGCCAGCTCTGAGATTTTATCAGGGCACTTCTATACCTGTGGGACATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCCCACCCCCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGGGCTCATTCTCCTATaGCCAACCCTGGCACTATAT +
Preference number: 4 (lower is better)
Translates to: PHPHCLPAGGFLLSTAEWGLILL*PTLALY
Trigger: ATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCC...CCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGGGGGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp AAGGGAAACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACAAGGAAGGCAACGTCTaGGCCGAGGGTAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: KGNFHLRLGSFSYGQPWHKEGNV*AEGNFS
Trigger: GGAGAAGTTACCCTCGGCCCAGACGTTGCCTTCCTT...GTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCCAGCAGGTGGTTTCCTaGTATCAACAGCAGAATGGG +
Preference number: 4 (lower is better)
Translates to: CHQVTATLGFRMATFPRAQQVVS*YQQQNG
Trigger: CCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTG...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp GGGCTGCTTCCTGGATCCAACCCCCTCACAGCCAACTTACCAACTTCTCATGGTATTGTCAGTAACTGCTaGACTCCTTCCAGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: GLLPGSNPLTANLPTSHGIVSNC*TPSRAL
Trigger: TAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAAT...ACCATGAGAAGTTGGTAAGTTGGCTGTGAGGGGGTTGGATCCAGGAAGCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp GGAAACCCACACAAGGGACACGCGTACCCCATTTCCAGGCTGTTTGGCACACAGTATATTGTCAGTAACTaGTGCACTCCTTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GNPHKGHAYPISRLFGTQYIVSN*CTPSRA
Trigger: GGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATA...CTGTGTGCCAAACAGCCTGGAAATGGGGTACGCGTGTCCCTTGTGTGGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCTTCTCAACATCCTCCTaGTATCACGGTGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: CHQVTATLGFRMATFPRAFSTSS*YHGEGN
Trigger: GTTGCCCTCACCGTGATAGCAGGAGGATGTTGAGAA...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCAATGTCCCACAGGTATAGAAGTGCCCTGATAAAATCTCAGAGCTGGCTGTCCTGGGACATCCTGGCTTaGGGGCCACTGAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PMSHRYRSALIKSQSWLSWDILA*GPLSFP
Trigger: AGGAAAGCTCAGTGGCCCCCAAGCCAGGATGTCCCA...GGACAGCCAGCTCTGAGATTTTATCAGGGCACTTCTATACCTGTGGGACATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp ACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGCAGGTGGCTCATCAGTaGTGGGATTGCGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: TQRTHMFSATPDQSLKVKQVAHQ*WDCGAA
Trigger: CGCTGCGCCGCAATCCCACCACTGATGAGCCACCTG...CTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp TCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGTCCCAGGAAAGCCTTaGGCGGAAGGGATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SYGQPWHYIVSNCCTPSRVPGKP*AEGIGK
Trigger: TTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGAC...CCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCTTGTCTCCCAGCAGGTaGTTTCCTGCTATCAACAGC +
Preference number: 4 (lower is better)
Translates to: PLSPSRWFPAINSRMGCPLSPSR*FPAINS
Trigger: GCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAA...GGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CTCACAGCCAACTTACCAACTTCTCATGGTAAGACAGCCAGAGAGCTGGGCTCCAGGCAAAAATCAGGGTaGAGGCACTCAGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LTANLPTSHGKTARELGSRQKSG*RHSALS
Trigger: AGACAGGGCTGAGTGCCTCCACCCTGATTTTTGCCT...GGAGCCCAGCTCTCTGGCTGTCTTACCATGAGAAGTTGGTAAGTTGGCTGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCAGGGCTGCTTCTGCATAGGGAGCTCTaGTGGCACAATGAATTAGTG +
Preference number: 4 (lower is better)
Translates to: PAGGFLLSTAEWAVPGLLLHREL*WHNELV
Trigger: CACTAATTCATTGTGCCACCAGAGCTCCCTATGCAG...AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 72 bp AGCATTATTGGGAGAGCACTAAAAGAGGCACCCCTGTaGGCATACCAGGGCCAGTTCTACCTCCAATCCTCC +
Preference number: 4 (lower is better)
Translates to: SIIGRALKEAPL*AYQGQFYLQSS
Trigger: GGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCTTTTAGTGCTCTCCCAATAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 72 bp TGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATaGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTAT +
Preference number: 4 (lower is better)
Translates to: WAHSPMANPGTI*SVTAALLPGPY
Trigger: ATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCTTGTCAATGCCCCTCTaGTCCCCGGTATATTCTTCA +
Preference number: 4 (lower is better)
Translates to: CHQVTATLGFRMATFPRALSMPL*SPVYSS
Trigger: TGAAGAATATACCGGGGATCAGAGGGGCATTGACAA...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp ACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGGGAAACTTCTGGGTCGAACCCCAGTaGAGACTCTTCTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: THMFSATPDQSLKVKGNFWVEPQ*RLFSPR
Trigger: CCTAGGGGAGAAGAGTCTTCACTGGGGTTCGACCCA...GAAGTTTCCCTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATCTAGGAGTTCAAGGCTaGAGTGAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHLGVQG*SELRSH
Trigger: GTGTGATCTCAGCTCACTGCAGCCTTGAACTCCTAG...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300433.7
CDS-3UTR GCA 90 bp AAGGGAAACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACCAGCAGGTGGTTTCCTaGTATCAACAGCAGAATGGG +
Preference number: 4 (lower is better)
Translates to: KGNFHLRLGSFSYGQPWHQQVVS*YQQQNG
Trigger: CCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTG...GTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTTTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp AACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGAGAAGGGTGGAACCTaGCACCTCCTCACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NFHLRLGSFSYGQPWHYIEKGGT*HLLTFL
Trigger: CAGGAAGGTGAGGAGGTGGCAGGTTCCACCCTTCTC...AATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp ACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTATGGCATCTTTGGGGCTaGCTGTGCCATCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TYAWAHSPMANPGTILSVWHLWG*LCHQAA
Trigger: GGCAGCTTGATGGCACAGGCAGCCCCAAAGATGCCA...TACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCAGGGCTGCTTATTCTTTTAAAAGGCTaGATAGGGAGCTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PAGGFLLSTAEWAVPGLLILLKG*IGSSGG
Trigger: GCCACCAGAGCTCCCTATGCAGCCTTTTAAAAGAAT...AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp AACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTTGGGACATCCTGGCTTaGGGGCCACTGAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: NFHLRLGSFSYGQPWHYIWDILA*GPLSFP
Trigger: AGGAAAGCTCAGTGGCCCCCAAGCCAGGATGTCCCA...AATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCACTTGTTCCTGGCATCTTTaGGGCTGCCTGTGCCATCAA +
Preference number: 4 (lower is better)
Translates to: PGTILSVTAALLPGPYLTCSWHL*GCLCHQ
Trigger: TTGATGGCACAGGCAGCCCCAAAGATGCCAGGAACA...AGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCAGGGCTGCTTTCCTATGGCCAACCCTaGCACTATATTGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: PAGGFLLSTAEWAVPGLLSYGQP*HYIVSN
Trigger: GTTACTGACAATATAGTGCCAGGGTTGGCCATAGGA...AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GTTCTACCTCCAATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTACTTCCACTTACGCTTaGGCTCATTCTCCTATGGCC +
Preference number: 4 (lower is better)
Translates to: VLPPILLRALASIDMGLSTSTYA*AHSPMA
Trigger: GGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGT...AGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp ATGAGCACTTCTGAAGGCTCATTTCTAGAAGTGGAATTGCCAGGTCACGTGCATCACTCCCACCAAGGATaGCCAGAAGAGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: MSTSEGSFLEVELPGHVHHSHQG*PEEPQR
Trigger: CCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTG...ATGCACGTGACCTGGCAATTCCACTTCTAGAAATGAGCCTTCAGAAGTGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CTCACAGCCAACTTACCAACTTCTCATGGTAAGACAGCCAGAGAGCTGGGCTCCTATATTGTCAGTAACTaGTGCACTCCTTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LTANLPTSHGKTARELGSYIVSN*CTPSRA
Trigger: GGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATA...GGAGCCCAGCTCTCTGGCTGTCTTACCATGAGAAGTTGGTAAGTTGGCTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp ACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTAAAGAGGCACCCCTGTTaGCATACCAGGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TYAWAHSPMANPGTILSVKRHPC*HTRASS
Trigger: AGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCTT...TACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GTTCTACCTCCAATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTCTGCATAGGGAGCTCTaGTGGCACAATGAATTAGTG +
Preference number: 4 (lower is better)
Translates to: VLPPILLRALASIDMGLSLHREL*WHNELV
Trigger: CACTAATTCATTGTGCCACCAGAGCTCCCTATGCAG...AGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp AGAGGCACCCCTGTTGGCATACCAGGGCCAGTTCTACCTCCAATCCTCCTGAGAGTGCATGATACTTATTaGGCTCTTTTGTATGAGCAC +
Preference number: 4 (lower is better)
Translates to: RGTPVGIPGPVLPPILLRVHDTY*ALLYEH
Trigger: GTGCTCATACAAAAGAGCTCAATAAGTATCATGCAC...TCTCAGGAGGATTGGAGGTAGAACTGGCCCTGGTATGCCAACAGGGGTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp AACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCGAGGGCAACATCAGCTaGAGGACTTCTCTAATTGGA +
Preference number: 4 (lower is better)
Translates to: NPGTILSVTAALLPGPYLEGNIS*RTSLIG
Trigger: TCCAATTAGAGAAGTCCTGCAGCTGATGTTGCCCTC...GAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp GCTGGGCTCCATGTGTCCCAGGAAAGCCTTGGGCGGAAGGGATTGGGAAACCCAAATTGCCAGGTCACGTaGATTTTACATTTTAATGGA +
Preference number: 4 (lower is better)
Translates to: AGLHVSQESLGRKGLGNPNCQVT*ILHFNG
Trigger: TCCATTAAAATGTAAAATGCACGTGACCTGGCAATT...TGGGTTTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACACATGGAGCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATTCCTATGGCCAACCCTaGCACTATATTGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHSYGQP*HYIVSN
Trigger: GTTACTGACAATATAGTGCCAGGGTTGGCCATAGGA...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp TGCAGTGAGTTCTCTATTCAGGTAGGAGTGGAAGCTGGCTCAGGGCTCATCCAGCATAGGGAGCTCTGGTaGCACAATGAATTAGTGCAT +
Preference number: 4 (lower is better)
Translates to: CSEFSIQVGVEAGSGLIQHRELW*HNELVH
Trigger: ATGCACTAATTCATTGTGCCACCAGAGCTCCCTATG...CTGGATGAGCCCTGAGCCAGCTTCCACTCCTACCTGAATAGAGAACTCACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp CCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCTTGTATGAGCACTTCTaGAGGCTCATTTCTAGAAGT +
Preference number: 4 (lower is better)
Translates to: PLSPSRWFPAINSRMGCPLYEHF*RLISRS
Trigger: ACTTCTAGAAATGAGCCTTCAGAAGTGCTCATACAA...GGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp GACACCATTCCCACTCCCACCAAGGATGACCAGAAGAGCCACAGAGGTTTCCATTTGAGCTCTTTTGTATaGGCACTTCTGAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: DTIPTPTKDDQKSHRGFHLSSFV*ALLKAH
Trigger: ATGAGCCTTCAGAAGTGCTCATACAAAAGAGCTCAA...ATGGAAACCTCTGTGGCTCTTCTGGTCATCCTTGGTGGGAGTGGGAATGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp GTTCTACCTCCAATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTTTGAGCTCTTTTGTATaGGCACTTCTGAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: VLPPILLRALASIDMGLSLSSFV*ALLKAH
Trigger: ATGAGCCTTCAGAAGTGCTCATACAAAAGAGCTCAA...AGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp CCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCGTGCATGATACTTATTaGGCTCTTTTGTATGAGCAC +
Preference number: 4 (lower is better)
Translates to: PLSPSRWFPAINSRMGCPVHDTY*ALLYEH
Trigger: GTGCTCATACAAAAGAGCTCAATAAGTATCATGCAC...GGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp AACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTATTGTCAGTAACTGCTaGACTCCTTCCAGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: NFHLRLGSFSYGQPWHYIIVSNC*TPSRAL
Trigger: TAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAAT...AATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp AACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTTTCTCAACATCCTCCTaGTATCACGGTGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: NFHLRLGSFSYGQPWHYIFSTSS*YHGEGN
Trigger: GTTGCCCTCACCGTGATAGCAGGAGGATGTTGAGAA...AATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp ACATCTACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAAGCCCATTCTACTGTTaGGCACCTCCAATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TSTQRTHMFSATPDQSLKSPFYC*APPMVS
Trigger: GCTGACCATTGGAGGTGCCCAACAGTAGAATGGGCT...TTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGTAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp AACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCCATAGGGAGCTCTGGTaGCACAATGAATTAGTGCAT +
Preference number: 4 (lower is better)
Translates to: NPGTILSVTAALLPGPYLHRELW*HNELVH
Trigger: ATGCACTAATTCATTGTGCCACCAGAGCTCCCTATG...GAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
3UTR CAA 72 bp CAATCCCTGAAAGTAAAGGGAAACTTCCACTTACGCTaGGGCTCATTCTCCTATGGCCAACCCTGGCACTAT +
Preference number: 4 (lower is better)
Translates to: QSLKVKGNFHLR*GSFSYGQPWHY
Trigger: ATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTTTCCCTTTACTTTCAGGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTGAGGGCAACATCAGCTaGAGGACTTCTCTAATTGGA +
Preference number: 4 (lower is better)
Translates to: HSPMANPGTILSVTAALLEGNIS*RTSLIG
Trigger: TCCAATTAGAGAAGTCCTGCAGCTGATGTTGCCCTC...AAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CCCCACCCCCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGAATTGCCAGGTCACGTaGATTTTACATTTTAATGGA +
Preference number: 4 (lower is better)
Translates to: PHPHCLPAGGFLLSTAEWNCQVT*ILHFNG
Trigger: TCCATTAAAATGTAAAATGCACGTGACCTGGCAATT...CCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGGGGGTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp ACATCTACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAACTTCCACTTACGCTTaGGCTCATTCTCCTATGGCC +
Preference number: 4 (lower is better)
Translates to: TSTQRTHMFSATPDQSLKTSTYA*AHSPMA
Trigger: GGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGT...TTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp GTTCTACCTCCAATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTATCAGTAACATTCAGTaGGGACATGTGTTTATCATG +
Preference number: 4 (lower is better)
Translates to: VLPPILLRALASIDMGLSISNIQ*GHVFIM
Trigger: CATGATAAACACATGTCCTCACTGAATGTTACTGAT...AGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR GCA 90 bp CATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTATTCTTTTAAAAGGCTaGATAGGGAGCTCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: HSPMANPGTILSVTAALLILLKG*IGSSGG
Trigger: GCCACCAGAGCTCCCTATGCAGCCTTTTAAAAGAAT...AAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp CCAATGTCCCACAGGTATAGAAGTGCCCTGATAAAATCTCAGAGCTGGCTGTCCCATTTCCAGGCTGTTTaGCACACAGAGACATCAAAA +
Preference number: 4 (lower is better)
Translates to: PMSHRYRSALIKSQSWLSHFQAV*HTETSK
Trigger: TTTTGATGTCTCTGTGTGCCAAACAGCCTGGAAATG...GGACAGCCAGCTCTGAGATTTTATCAGGGCACTTCTATACCTGTGGGACATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp ACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTACAGGATGAGCATTATTaGGAGAGCACTAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: TYAWAHSPMANPGTILSVQDEHY*ESTKRG
Trigger: GCCTCTTTTAGTGCTCTCCCAATAATGCTCATCCTG...TACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR TCA 90 bp AACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTTTGTATGAGCACTTCTaGAGGCTCATTTCTAGAAGT +
Preference number: 4 (lower is better)
Translates to: NFHLRLGSFSYGQPWHYILYEHF*RLISRS
Trigger: ACTTCTAGAAATGAGCCTTCAGAAGTGCTCATACAA...AATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CCA 90 bp ATGAGCACTTCTGAAGGCTCATTTCTAGAAGTGGAATTGCCAGGTCACGTGCATCATTTCCAGGCTGTTTaGCACACAGAGACATCAAAA +
Preference number: 4 (lower is better)
Translates to: MSTSEGSFLEVELPGHVHHFQAV*HTETSK
Trigger: TTTTGATGTCTCTGTGTGCCAAACAGCCTGGAAATG...ATGCACGTGACCTGGCAATTCCACTTCTAGAAATGAGCCTTCAGAAGTGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS CCA 90 bp AAGGTGGGCGCGAGGCCGGGGACCCAAGCTTGGGACATCCTGGCTTaGGGGCCACTGAGCTTTCCTGTAGTCCCAGTTACTCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: KVGARPGTQAWDILA*GPLSFPVVPVTLEV
Trigger: AACCTCCAGAGTAACTGGGACTACAGGAAAGCTCAGTGGCCCCCAAGCCAGGATGTCCCAAGCTTGGGTCCCCGGCCTCGCGCCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300433.7
CDS-3UTR CAA 90 bp GGGCTGCTTCCTGGATCCAACCCCCTCACAGCCAACTTACCAACTTCTCATGGTGCCGGGGACCCAAGCTaGGGACATCCTGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: GLLPGSNPLTANLPTSHGAGDPS*GHPGLG
Trigger: CCCCAAGCCAGGATGTCCCAAGCTTGGGTCCCCGGC...ACCATGAGAAGTTGGTAAGTTGGCTGTGAGGGGGTTGGATCCAGGAAGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CAGGTGGCTCATCAGTGGTGGGATTGCGGCGCAGCGACCCCATCACCGCACCCCAACTTCCACTTACGCTaGGGCTCATTCTCCTATGGC +
Preference number: 5 (lower is better)
Translates to: QVAHQWWDCGAATPSPHPNFHLR*GSFSYG
Trigger: GCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT...GGGGTGCGGTGATGGGGTCGCTGCGCCGCAATCCCACCACTGATGAGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp TATTCAGGTAGGAGTGGAAGCTGGCTCAGGGCTCATCCAGTCCAATGTCCCACAGCCGGGGACCCAAGCTaGGGACATCCTGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: YSGRSGSWLRAHPVQCPTAGDPS*GHPGLG
Trigger: CCCCAAGCCAGGATGTCCCAAGCTTGGGTCCCCGGC...TGTGGGACATTGGACTGGATGAGCCCTGAGCCAGCTTCCACTCCTACCTGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CCCCACCCCCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGTTGGGACATCCTGGCTaGGGGGCCACTGAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: PHPHCLPAGGFLLSTAEWLGHPG*GATELS
Trigger: GGAAAGCTCAGTGGCCCCCAAGCCAGGATGTCCCAA...CCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGGGGGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CCCCACCCCCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGCCCAAGGCATTGGCATaGTCCCGCCCCATTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PHPHCLPAGGFLLSTAEWPKALA*SRPILH
Trigger: ATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGG...CCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGGGGGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp GGAAACCCACACAAGGGACACGCGTACCCCATTTCCAGGCTGTTTGGCACACAGGAGCTTTGGCCAGCATaGACATGGGGCTCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: GNPHKGHAYPISRLFGTQELWPA*TWGSLP
Trigger: AGGCAGAGAGCCCCATGTCAATGCTGGCCAAAGCTC...CTGTGTGCCAAACAGCCTGGAAATGGGGTACGCGTGTCCCTTGTGTGGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CTGAGTCCCAAGGCATTGGCATTGTCCCGCCCCATTCTGCATGACTATGCCAGGAAAGAGGCACCCCTGTaGGCATACCAGGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LSPKALALSRPILHDYARKEAPL*AYQGQF
Trigger: GAACTGGCCCTGGTATGCCAACAGGGGTGCCTCTTT...CCTGGCATAGTCATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp GTTCTACCTCCAATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTTTGGGACATCCTGGCTaGGGGGCCACTGAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: VLPPILLRALASIDMGLSLGHPG*GATELS
Trigger: GGAAAGCTCAGTGGCCCCCAAGCCAGGATGTCCCAA...AGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp GGGCTGCTTCCTGGATCCAACCCCCTCACAGCCAACTTACCAACTTCTCATGGTTTTGGCTGCAATCTTTaGGGGGCCAGCCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GLLPGSNPLTANLPTSHGFGCNL*GASQQA
Trigger: AGCCTGCTGGCTGGCCCCCAAAAGATTGCAGCCAAA...ACCATGAGAAGTTGGTAAGTTGGCTGTGAGGGGGTTGGATCCAGGAAGCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCTCCGGCTCTCTGCAGTaGCGACAGAAGCACTTAGCC +
Preference number: 5 (lower is better)
Translates to: CHQVTATLGFRMATFPRASGSLQ*RQKHLA
Trigger: GGCTAAGTGCTTCTGTCGCAACTGCAGAGAGCCGGA...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCACTTCATCAGTGGTGGGATaGCGGCGCAGCGACCCCATC +
Preference number: 5 (lower is better)
Translates to: PGTILSVTAALLPGPYLTSSVVG*RRSDPI
Trigger: GATGGGGTCGCTGCGCCGCAATCCCACCACTGATGA...AGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp TGTCACCAGGTCACAGCAACACTAGGTTTCAGGATGGCCACTTTCCCTAGGGCCAAAGAGGCACCCCTGTaGGCATACCAGGGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: CHQVTATLGFRMATFPRAKEAPL*AYQGQF
Trigger: GAACTGGCCCTGGTATGCCAACAGGGGTGCCTCTTT...GGCCCTAGGGAAAGTGGCCATCCTGAAACCTAGTGTTGCTGTGACCTGGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp GTTCTACCTCCAATCCTCCTGAGAGCTTTGGCCAGCATTGACATGGGGCTCTCTCTTGGGCGGAAGGGATaGGGAAACCCACACAAGGGA +
Preference number: 5 (lower is better)
Translates to: VLPPILLRALASIDMGLSLGRKG*GNPHKG
Trigger: TCCCTTGTGTGGGTTTCCCAATCCCTTCCGCCCAAG...AGAGAGCCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGATTGGAGGTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CTCACAGCCAACTTACCAACTTCTCATGGTAAGACAGCCAGAGAGCTGGGCTCCCTGTTCCTGGCATCTTaGGGGCTGCCTGTGCCATCA +
Preference number: 5 (lower is better)
Translates to: LTANLPTSHGKTARELGSLFLAS*GLPVPS
Trigger: TGATGGCACAGGCAGCCCCAAAGATGCCAGGAACAG...GGAGCCCAGCTCTCTGGCTGTCTTACCATGAGAAGTTGGTAAGTTGGCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTCCAGGGCCCTATCTCACTTGTCCCAGGAAAGCCTaGGGCGGAAGGGATTGGGAA +
Preference number: 5 (lower is better)
Translates to: PGTILSVTAALLPGPYLTCPRKA*GGRDWE
Trigger: TTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACA...AGTGAGATAGGGCCCTGGAAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp ACATCTACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAATCATCAGTGGTGGGATaGCGGCGCAGCGACCCCATC +
Preference number: 5 (lower is better)
Translates to: TSTQRTHMFSATPDQSLKSSVVG*RRSDPI
Trigger: GATGGGGTCGCTGCGCCGCAATCCCACCACTGATGA...TTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGTAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CCCCACCCCCATTGTCTCCCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGCCATTTCCAGGCTGTTaGGCACACAGAGACATCAAA +
Preference number: 5 (lower is better)
Translates to: PHPHCLPAGGFLLSTAEWPFPGC*AHRDIK
Trigger: TTTGATGTCTCTGTGTGCCAAACAGCCTGGAAATGG...CCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGGGAGACAATGGGGGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CCAGCAGGTGGTTTCCTGCTATCAACAGCAGAATGGGCTGTCCCAGGGCTGCTTAACCCTGGCACTATATaGTCAGTAACTGCTGCACTC +
Preference number: 5 (lower is better)
Translates to: PAGGFLLSTAEWAVPGLLNPGTI*SVTAAL
Trigger: GAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT...AAGCAGCCCTGGGACAGCCCATTCTGCTGTTGATAGCAGGAAACCACCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTTCCGGCTCTCTGCAGTaGCGACAGAAGCACTTAGCC +
Preference number: 5 (lower is better)
Translates to: HSPMANPGTILSVTAALLSGSLQ*RQKHLA
Trigger: GGCTAAGTGCTTCTGTCGCAACTGCAGAGAGCCGGA...AAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp ACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGGGAAACTTCCTTGGGCGGAAGGGATaGGGAAACCCACACAAGGGA +
Preference number: 5 (lower is better)
Translates to: THMFSATPDQSLKVKGNFLGRKG*GNPHKG
Trigger: TCCCTTGTGTGGGTTTCCCAATCCCTTCCGCCCAAG...GAAGTTTCCCTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp ACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTACTGTTCCTGGCATCTTaGGGGCTGCCTGTGCCATCA +
Preference number: 5 (lower is better)
Translates to: TYAWAHSPMANPGTILSVLFLAS*GLPVPS
Trigger: TGATGGCACAGGCAGCCCCAAAGATGCCAGGAACAG...TACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp ATGAGCACTTCTGAAGGCTCATTTCTAGAAGTGGAATTGCCAGGTCACGTGCATTGTCCCAGGAAAGCCTaGGGCGGAAGGGATTGGGAA +
Preference number: 5 (lower is better)
Translates to: MSTSEGSFLEVELPGHVHCPRKA*GGRDWE
Trigger: TTCCCAATCCCTTCCGCCCAAGGCTTTCCTGGGACA...ATGCACGTGACCTGGCAATTCCACTTCTAGAAATGAGCCTTCAGAAGTGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp ATGAGCACTTCTGAAGGCTCATTTCTAGAAGTGGAATTGCCAGGTCACGTGCATCCCAAGGCATTGGCATaGTCCCGCCCCATTCTGCAT +
Preference number: 5 (lower is better)
Translates to: MSTSEGSFLEVELPGHVHPKALA*SRPILH
Trigger: ATGCAGAATGGGGCGGGACAATGCCAATGCCTTGGG...ATGCACGTGACCTGGCAATTCCACTTCTAGAAATGAGCCTTCAGAAGTGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp ACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAAGTAAAGGGAAACTTCATCCTCCTGAGAGCTTaGGCCAGCATTGACATGGGG +
Preference number: 5 (lower is better)
Translates to: THMFSATPDQSLKVKGNFILLRA*ASIDMG
Trigger: CCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGAT...GAAGTTTCCCTTTACTTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTATCCTCCTGAGAGCTTaGGCCAGCATTGACATGGGG +
Preference number: 5 (lower is better)
Translates to: HSPMANPGTILSVTAALLILLRA*ASIDMG
Trigger: CCCCATGTCAATGCTGGCCAAAGCTCTCAGGAGGAT...AAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp AAGGGAAACTTCCACTTACGCTTGGGCTCATTCTCCTATGGCCAACCCTGGCACAACCCTGGCACTATATaGTCAGTAACTGCTGCACTC +
Preference number: 5 (lower is better)
Translates to: KGNFHLRLGSFSYGQPWHNPGTI*SVTAAL
Trigger: GAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTT...GTGCCAGGGTTGGCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp GGGCTGCTTCCTGGATCCAACCCCCTCACAGCCAACTTACCAACTTCTCATGGTTTTCTAGAAGTGGAATaGCCAGGTCACGTGCATTTT +
Preference number: 5 (lower is better)
Translates to: GLLPGSNPLTANLPTSHGFLEVE*PGHVHF
Trigger: AAAATGCACGTGACCTGGCAATTCCACTTCTAGAAA...ACCATGAGAAGTTGGTAAGTTGGCTGTGAGGGGGTTGGATCCAGGAAGCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CCAATGTCCCACAGGTATAGAAGTGCCCTGATAAAATCTCAGAGCTGGCTGTCCCCATTTCCAGGCTGTTaGGCACACAGAGACATCAAA +
Preference number: 5 (lower is better)
Translates to: PMSHRYRSALIKSQSWLSPFPGC*AHRDIK
Trigger: TTTGATGTCTCTGTGTGCCAAACAGCCTGGAAATGG...GGACAGCCAGCTCTGAGATTTTATCAGGGCACTTCTATACCTGTGGGACATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp CATTCTCCTATGGCCAACCCTGGCACTATATTGTCAGTAACTGCTGCACTCCTTAACTTCCACTTACGCTaGGGCTCATTCTCCTATGGC +
Preference number: 5 (lower is better)
Translates to: HSPMANPGTILSVTAALLNFHLR*GSFSYG
Trigger: GCCATAGGAGAATGAGCCCAAGCGTAAGTGGAAGTT...AAGGAGTGCAGCAGTTACTGACAATATAGTGCCAGGGTTGGCCATAGGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS-3UTR CAA 90 bp ACATCTACACAAAGAACCCACATGTTTTCTGCCACCCCTGACCAATCCCTGAAATTTCTAGAAGTGGAATaGCCAGGTCACGTGCATTTT +
Preference number: 5 (lower is better)
Translates to: TSTQRTHMFSATPDQSLKFLEVE*PGHVHF
Trigger: AAAATGCACGTGACCTGGCAATTCCACTTCTAGAAA...TTTCAGGGATTGGTCAGGGGTGGCAGAAAACATGTGGGTTCTTTGTGTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300433.7
ENST00000507382.2
CDS GCA 72 bp ACCAGGGAGAGGGGTGACCCAATGCTGGGTGCAGAGTaGCCTCCAGGATCGAAGGGCCCTCCACTGTCTCTG +
Preference number: 6 (lower is better)
Translates to: TRERGDPMLGAE*PPGSKGPPLSL
Trigger: CAGAGACAGTGGAGGGCCCTTCGATCCTGGAGGGCACTCTGCACCCAGCATTGGGTCACCCCTCTCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511882.1
CDS CAA 72 bp CGCGAGGCCGGGGACCCAAGCTTGGGACATCCTGGCTaGGGGGCCACTGAGCTTTCCTGTAGTCCCAGTTAC +
Preference number: 6 (lower is better)
Translates to: REAGDPSLGHPG*GATELSCSPSY
Trigger: GTAACTGGGACTACAGGAAAGCTCAGTGGCCCCCAAGCCAGGATGTCCCAAGCTTGGGTCCCCGGCCTCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300433.7
CDS CAA 90 bp CAAGGTGGGCGCGAGGCCGGGGACCCAAGCTTGGGACATCCTGGCTaGGGGGCCACTGAGCTTTCCTGTAGTCCCAGTTACTCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: QGGREAGDPSLGHPG*GATELSCSPSYSGG
Trigger: ACCTCCAGAGTAACTGGGACTACAGGAAAGCTCAGTGGCCCCCAAGCCAGGATGTCCCAAGCTTGGGTCCCCGGCCTCGCGCCCACCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300433.7
CDS CCA 72 bp GCGAGGCCGGGGACCCAAGCTTGGGACATCCTGGCTTaGGGGCCACTGAGCTTTCCTGTAGTCCCAGTTACT +
Preference number: 6 (lower is better)
Translates to: ARPGTQAWDILA*GPLSFPVVPVT
Trigger: AGTAACTGGGACTACAGGAAAGCTCAGTGGCCCCCAAGCCAGGATGTCCCAAGCTTGGGTCCCCGGCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300433.7