RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM91 (Homo sapiens)

Ensembl gene IDs: ENSG00000142046

Ensembl transcript IDs: ENST00000342187.9, ENST00000356385.8, ENST00000392002.7, ENST00000413014.6, ENST00000436170.6, ENST00000447302.6, ENST00000535712.1, ENST00000537354.5, ENST00000539627.5, ENST00000542945.5, ENST00000544232.5, ENST00000546050.1, ENST00000546362.5, ENST00000604123.5

Found 431 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGGCAAGGTAGGCAGCCAGGGTCACCAGGGCAGCCGCATACGTaGACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCAC +
Preference number: 1 (lower is better)
Translates to: GRQGRQPGSPGQPHT*TRPARRRGPPAGRH
Trigger: GTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGACCCTGGCTGCCTACCTTGCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
3UTR GCA 90 bp CTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAG +
Preference number: 1 (lower is better)
Translates to: LLPPPQPHPPRFSTL*PQICWAAGLRVHSE
Trigger: CTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
3UTR GCA 90 bp CCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCTGTAGGGGC +
Preference number: 1 (lower is better)
Translates to: PQPHPPRFSTLCPQI*WAAGLRVHSEGCRG
Trigger: GCCCCTACAGCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
3UTR GCA 90 bp AGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCC +
Preference number: 1 (lower is better)
Translates to: RGRVPVQLAPVSRCS*RRRSLIHQDSPLSA
Trigger: GGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
3UTR GCA 90 bp CCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTC +
Preference number: 1 (lower is better)
Translates to: PGRGRVPVQLAPVSR*SCRRRSLIHQDSPL
Trigger: GAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
3UTR CCA 90 bp GGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCT +
Preference number: 1 (lower is better)
Translates to: GCLVFNLRLLPPEER*PGRGRVPVQLAPVS
Trigger: AGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
3UTR-3UTR TCA 90 bp CAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGGGAGGCGGCCCCTGCGGCAGTGGGCAGCAGTaGCCCAGGCATCCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: QPDGEDPQQEGTAGGGPCGSGQQ*PRHPLS
Trigger: ACTGAGGGGATGCCTGGGTCACTGCTGCCCACTGCC...GCAGGGGCCGCCTCCCGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR CCA 90 bp TACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGGCCTGGATGTCCCCCTTaGCCCAAGCCTTGTTGGTCT +
Preference number: 2 (lower is better)
Translates to: YVHTPSPTARTPSRKARRPGCPP*PKPCWS
Trigger: AGACCAACAAGGCTTGGGCCAAGGGGGACATCCAGG...CCGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR TCA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCGGCAGTGGGCAGCAGTaGCCCAGGCATCCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSGSGQQ*PRHPLS
Trigger: ACTGAGGGGATGCCTGGGTCACTGCTGCCCACTGCC...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR TCA 90 bp GAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCAGGCAGTGGGCAGCAGTaGCCCAGGCATCCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: EGFQSSSLPFLDAPAAAAGSGQQ*PRHPLS
Trigger: ACTGAGGGGATGCCTGGGTCACTGCTGCCCACTGCC...TGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR GCA 90 bp ACTAGGGCGGGTCTCGGGAGGCAAGGTAGGCAGCCAGGGTCACCAGGGCAGCCGTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 2 (lower is better)
Translates to: TRAGLGRQGRQPGSPGQPLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...CGGCTGCCCTGGTGACCCTGGCTGCCTACCTTGCCTCCCGAGACCCGCCCTAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR GCA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
3UTR-3UTR CCA 90 bp GGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCTGGCCCAAGCCTTGTTaGTCTGTAGAGGCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: GEGFQSSSLPFLDAPAAAWPKPC*SVEAVG
Trigger: GCCCACTGCCTCTACAGACCAACAAGGCTTGGGCCA...GGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR GCA 90 bp CAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: QGCLVFNLRLLPPEERWPAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...TGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
3UTR-3UTR GCA 90 bp GTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 2 (lower is better)
Translates to: VFNLRLLPPEERWPGRGRVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...CCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
3UTR-3UTR CCA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCTGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 2 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFCPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
3UTR-3UTR GCA 90 bp GTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 2 (lower is better)
Translates to: VFNLRLLPPEERWPGRGRTDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...CCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000546362.5
3UTR-3UTR GCA 90 bp GGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: GEGFQSSSLPFLDAPAAARFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...GGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
3UTR-3UTR CCA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCCCCGCCTCAGGTATATaGCTCTTTGTTTTTGTGGTG +
Preference number: 2 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSPASGI*LFVFVV
Trigger: CACCACAAAAACAAAGAGCCATATACCTGAGGCGGG...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR CCA 90 bp ATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGAAATCTTGCAGAGAGTaGCAGACTCAGGATTTGAGT +
Preference number: 2 (lower is better)
Translates to: IRAHAQPDGEDPQQEGTAKSCRE*QTQDLS
Trigger: ACTCAAATCCTGAGTCTGCCACTCTCTGCAAGATTT...CGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR TCA 90 bp AATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGGCAGACTCAGGATTTaGGTTCAGGTTCTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: NLRLLPPEERWPGRGRVPGRLRI*VQVLWA
Trigger: AGCCCAGAGAACCTGAACTCAAATCCTGAGTCTGCC...TGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR GCA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFRFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
3UTR-3UTR GCA 90 bp CCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: PGRGRVPVQLAPVSRCSCRFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...GCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
3UTR-3UTR CCA 90 bp CCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATCCCGCCTCAGGTATATaGCTCTTTGTTTTTGTGGTG +
Preference number: 2 (lower is better)
Translates to: PAAAAASSTKILHSLPTDPASGI*LFVFVV
Trigger: CACCACAAAAACAAAGAGCCATATACCTGAGGCGGG...ATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR CAA 90 bp ACTAGGGCGGGTCTCGGGAGGCAAGGTAGGCAGCCAGGGTCACCAGGGCAGCCGGTGTTTAATCTCAGGTaGCTGCCGCCCGAAGAGCGG +
Preference number: 3 (lower is better)
Translates to: TRAGLGRQGRQPGSPGQPVFNLR*LPPEER
Trigger: CCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC...CGGCTGCCCTGGTGACCCTGGCTGCCTACCTTGCCTCCCGAGACCCGCCCTAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356385.8
ENST00000539627.5
3UTR-3UTR CAA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGCCCTGGATGTCCCCCTaGGCCCAAGCCTTGTTGGTC +
Preference number: 3 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQPWMSP*AQALLV
Trigger: GACCAACAAGGCTTGGGCCAAGGGGGACATCCAGGG...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR CAA 90 bp ATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGGGGCAGGAGAATCACTaGAACCCAAGAGGCAGAGAT +
Preference number: 3 (lower is better)
Translates to: IRAHAQPDGEDPQQEGTAGQENH*NPRGRD
Trigger: ATCTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCC...CGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR CAA 90 bp GGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCTTGGCCCAAGCCTTGTaGGTCTGTAGAGGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: GEGFQSSSLPFLDAPAAALAQAL*VCRGSG
Trigger: CCCACTGCCTCTACAGACCAACAAGGCTTGGGCCAA...GGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR CAA 90 bp AATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCACCCTGGATGTCCCCCTaGGCCCAAGCCTTGTTGGTC +
Preference number: 3 (lower is better)
Translates to: NLRLLPPEERWPGRGRVPPWMSP*AQALLV
Trigger: GACCAACAAGGCTTGGGCCAAGGGGGACATCCAGGG...TGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR CAA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCTCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 3 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFSLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546050.1
ENST00000546362.5
3UTR GCA 72 bp CCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTT +
Preference number: 3 (lower is better)
Translates to: PPQPHPPRFSTL*PQICWAAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
3UTR GCA 72 bp GGCTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: GCKGVWCLISGC*RPKSGGQEGEG
Trigger: CCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
3UTR GCA 72 bp GTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATCCACCAAGATTCTCCA +
Preference number: 3 (lower is better)
Translates to: VPVQLAPVSRCS*RRRSLIHQDSP
Trigger: TGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
3UTR CCA 72 bp GTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCT +
Preference number: 3 (lower is better)
Translates to: VFNLRLLPPEER*PGRGRVPVQLA
Trigger: AGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
3UTR GCA 72 bp CATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGC +
Preference number: 3 (lower is better)
Translates to: HPPRFSTLCPQI*WAAGLRVHSEG
Trigger: GCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
3UTR-3UTR CAA 90 bp GTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCAGGTATATGGCTCTTaGTTTTTGTGGTGCATTTTT +
Preference number: 3 (lower is better)
Translates to: VAAARRAVARKGKGSSPAQVYGS*FLWCIF
Trigger: AAAAATGCACCACAAAAACAAAGAGCCATATACCTG...AGCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR CAA 90 bp ATGTATTCCAAAAGCAGATACGTAGCACCTACTATAGGTCAGGCACTGGGGATGCCCTGGATGTCCCCCTaGGCCCAAGCCTTGTTGGTC +
Preference number: 3 (lower is better)
Translates to: MYSKSRYVAPTIGQALGMPWMSP*AQALLV
Trigger: GACCAACAAGGCTTGGGCCAAGGGGGACATCCAGGG...CATCCCCAGTGCCTGACCTATAGTAGGTGCTACGTATCTGCTTTTGGAATACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
3UTR-3UTR CAA 90 bp GAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCACAGGTATATGGCTCTTaGTTTTTGTGGTGCATTTTT +
Preference number: 3 (lower is better)
Translates to: EGFQSSSLPFLDAPAAAAQVYGS*FLWCIF
Trigger: AAAAATGCACCACAAAAACAAAGAGCCATATACCTG...TGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp TACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGGGGGCAGCCGCATACGTaGACACGCCCAGCCCGACGG +
Preference number: 4 (lower is better)
Translates to: YVHTPSPTARTPSRKARRGQPHT*TRPARR
Trigger: CCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCC...CCGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp GCAGCCAGGGTCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGACCCCAGCTCATGCCTaGCAGGCTTCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AARVTRAAAYVHTPSPTATPAHA*QASGQG
Trigger: CCCCTGCCCAGAAGCCTGGCAGGCATGAGCTGGGGT...CGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGACCCTGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp CAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGGGAGGCGGCCCCTGCGGCTGTCCATGGCTTTaGGGAAACTCCAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QPDGEDPQQEGTAGGGPCGCPWL*GNSRRG
Trigger: ACCCCTCCTGGAGTTTCCCCAAAGCCATGGACAGCC...GCAGGGGCCGCCTCCCGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp CCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGGGAGGCGGCCCCTGTGGCCCAAGCCTTGTTaGTCTGTAGAGGCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: PARRRGPPAGRHGGRRPLWPKPC*SVEAVG
Trigger: GCCCACTGCCTCTACAGACCAACAAGGCTTGGGCCA...CAGGGGCCGCCTCCCGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp CACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: HQGSRIRAHAQPDGEDPQPPEER*PGRGRV
Trigger: AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGG...CTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCGGGCAGCCGCATACGTaGACACGCCCAGCCCGACGG +
Preference number: 4 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSGQPHT*TRPARR
Trigger: CCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCC...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp GCAGCCAGGGTCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAACATCAGGGGGCCTTaGTTCCCCCAGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: AARVTRAAAYVHTPSPTANIRGP*FPQASA
Trigger: AGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTT...CGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGACCCTGGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp CACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGAACATCAGGGGGCCTTaGTTCCCCCAGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: HQGSRIRAHAQPDGEDPQNIRGP*FPQASA
Trigger: AGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTT...CTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCGGGCAGCCGCATACGTaGACACGCCCAGCCCGACGG +
Preference number: 4 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSGQPHT*TRPARR
Trigger: CCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCC...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp AGCCAGGGTCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGCTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SQGHQGSRIRAHAQPDGELCPQI*WAAGLR
Trigger: CCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG...CTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGACCCTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp CAGGGTCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACCTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QGHQGSRIRAHAQPDGEDLCPQI*WAAGLR
Trigger: CCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG...GTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGACCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp GCAGCCAGGGTCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: AARVTRAAAYVHTPSPTAVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...CGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGACCCTGGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp GGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGATGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GQPHTCTRPARRRGPPAGCPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...TCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp GGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCACCCCAGCTCATGCCTaGCAGGCTTCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GRVPVQLAPVSRCSCRRRTPAHA*QASGQG
Trigger: CCCCTGCCCAGAAGCCTGGCAGGCATGAGCTGGGGT...GCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCACCCCAGCTCATGCCTaGCAGGCTTCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSTPAHA*QASGQG
Trigger: CCCCTGCCCAGAAGCCTGGCAGGCATGAGCTGGGGT...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp GTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTACCCCAGCTCATGCCTaGCAGGCTTCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VAAARRAVARKGKGSSPATPAHA*QASGQG
Trigger: CCCCTGCCCAGAAGCCTGGCAGGCATGAGCTGGGGT...AGCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp AGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: SRIRAHAQPDGEDPQQEGTDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...GCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QVAAARRAVARKGKGSSPAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GRVPVQLAPVSRCSCRRRAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...GCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCCACTTGCCCGGACCCTaGCACCGAGGATCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: GRVPVQLAPVSRCSCRRRHLPGP*HRGSKG
Trigger: CCCCTTGGATCCTCGGTGGCAGGGTCCGGGCAAGTG...GCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR GCA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCCACTTGCCCGGACCCTaGCACCGAGGATCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSHLPGP*HRGSKG
Trigger: CCCCTTGGATCCTCGGTGGCAGGGTCCGGGCAAGTG...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR CCA 90 bp CAGGGTCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACTGCCTGCCAGGCTTCTaGGCAGGGGTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: QGHQGSRIRAHAQPDGEDCLPGF*AGVSHS
Trigger: AGAATGTGAGACCCCTGCCCAGAAGCCTGGCAGGCA...GTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSPPEER*PGRGRV
Trigger: AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGG...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGGGAGGCGGCCCCTGCCCGCCTCAGGTATATaGCTCTTTGTTTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PARRRGPPAGRHGGRRPLPASGI*LFVFVV
Trigger: CACCACAAAAACAAAGAGCCATATACCTGAGGCGGG...CAGGGGCCGCCTCCCGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR TCA 90 bp AGCCAGGGTCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGTCCAGCAGAGGCTGTTaGAGCTCACGAAGACTAGGG +
Preference number: 4 (lower is better)
Translates to: SQGHQGSRIRAHAQPDGESSRGC*SSRRLG
Trigger: CCCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGA...CTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGACCCTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR TCA 90 bp GGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCCGGCGAGGGATCCCTaGAAGCCGACGTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: GRGRVPVQLAPVSRCSCRPARDP*KPTSAS
Trigger: GGACGCTGACGTCGGCTTTCAGGGATCCCTCGCCGG...GCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS-3UTR TCA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCCCTGAACCCTCGCAATaGCACTTGCCCGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSPEPSQ*HLPGPC
Trigger: GCAGGGTCCGGGCAAGTGTCATTGCGAGGGTTCAGG...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR GCA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGACCCCAGCTCATGCCTaGCAGGCTTCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQTPAHA*QASGQG
Trigger: CCCCTGCCCAGAAGCCTGGCAGGCATGAGCTGGGGT...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp AGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCACCCCAGCTCATGCCTaGCAGGCTTCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RGRVPVQLAPVSRCSCRRTPAHA*QASGQG
Trigger: CCCCTGCCCAGAAGCCTGGCAGGCATGAGCTGGGGT...GCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCGGCGGTGACAGGAACTaGAAACCCCTCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSGGDRN*KPLRDS
Trigger: CGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCC...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp ATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGATGGTGAAAGACGGCTaGCTCCATCCCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: IRAHAQPDGEDPQQEGTAMVKDG*LHPSPS
Trigger: ACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCAT...CGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp TCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGACAGAAGGCAGCGATaGCAACGGGCCAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: SPGQPHTCTRPARRRGPPDRRQR*QRARNN
Trigger: GTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTC...TGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp GTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGGGCAGCCGCATACGTaGACACGCCCAGCCCGACGG +
Preference number: 4 (lower is better)
Translates to: VWCLISGCCRPKSGGQEGGQPHT*TRPARR
Trigger: CCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCC...CCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
CDS-3UTR GCA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCACTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QVAAARRAVARKGKGSSPLCPQI*WAAGLR
Trigger: CCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GCTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: APAAAAASSTKILHSLPTAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...TGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCAGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: EGFQSSSLPFLDAPAAAAAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...TGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTGGGGCGCTGGGACCTTaGGCTTTGCTCTACGCGGGT +
Preference number: 4 (lower is better)
Translates to: SQVAAARRAVARKGKGSSGALGP*ALLYAG
Trigger: ACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCC...ACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR GCA 90 bp GGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCCCTCGCAATGACACTTaGCCGGACCCTGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: GEGFQSSSLPFLDAPAAAPRNDT*PDPATE
Trigger: CTCGGTGGCAGGGTCCGGGCAAGTGTCATTGCGAGG...GGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR CCA 90 bp GTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTAACATCAGGGGGCCTTaGTTCCCCCAGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: VAAARRAVARKGKGSSPANIRGP*FPQASA
Trigger: AGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTT...AGCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAACATCAGGGGGCCTTaGTTCCCCCAGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSNIRGP*FPQASA
Trigger: AGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTT...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCCTAGGGCGGGTCTTCTaGGCTAGACAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSLGRVF*ARQKAA
Trigger: CGCTGCCTTCTGTCTAGCCCAGAAGACCCGCCCTAG...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413014.6
ENST00000544232.5
ENST00000604123.5
CDS-3UTR TCA 90 bp GGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCGGCAGTGGGCAGCAGTaGCCCAGGCATCCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GRGRVPVQLAPVSRCSCRGSGQQ*PRHPLS
Trigger: ACTGAGGGGATGCCTGGGTCACTGCTGCCCACTGCC...GCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR TCA 90 bp CCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGGCAGTGGGCAGCAGTaGCCCAGGCATCCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PLSAHRFAGLPASGFTVRGSGQQ*PRHPLS
Trigger: ACTGAGGGGATGCCTGGGTCACTGCTGCCCACTGCC...CCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR TCA 90 bp CCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCCGGCGAGGGATCCCTaGAAGCCGACGTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: PGRGRVPVQLAPVSRCSCPARDP*KPTSAS
Trigger: GGACGCTGACGTCGGCTTTCAGGGATCCCTCGCCGG...GCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS-3UTR TCA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGCCTGAACCCTCGCAATaGCACTTGCCCGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQPEPSQ*HLPGPC
Trigger: GCAGGGTCCGGGCAAGTGTCATTGCGAGGGTTCAGG...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR TCA 90 bp TCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCTGAACCCTCGCAATaGCACTTGCCCGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: SQVAAARRAVARKGKGSSPEPSQ*HLPGPC
Trigger: GCAGGGTCCGGGCAAGTGTCATTGCGAGGGTTCAGG...ACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR GCA 90 bp CCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATACCCCAGCTCATGCCTaGCAGGCTTCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PAAAAASSTKILHSLPTDTPAHA*QASGQG
Trigger: CCCCTGCCCAGAAGCCTGGCAGGCATGAGCTGGGGT...ATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCGGCGGTGACAGGAACTaGAAACCCCTCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSGGDRN*KPLRDS
Trigger: CGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCC...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp GGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCGGCGGTGACAGGAACTaGAAACCCCTCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: GRVPVQLAPVSRCSCRRRGGDRN*KPLRDS
Trigger: CGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCC...GCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp CTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGCTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLPPPQPHPPRFSTLCPQLCPQI*WAAGLR
Trigger: CCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG...CTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGCTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQLCPQI*WAAGLR
Trigger: CCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: LRLLPPEERWPGRGRVPVVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...GACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: QVAAARRAVARKGKGSSPVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGAGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp AATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: NLRLLPPEERWPGRGRVPAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...TGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCTGGGACCTTGCGCTTTaGTCTACGCGGGTCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GEGFQSSSLPFLDAPAAAWDLAL*STRVSA
Trigger: CGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCA...GGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
CDS-3UTR GCA 90 bp AATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGGGGCGCTGGGACCTTaGGCTTTGCTCTACGCGGGT +
Preference number: 4 (lower is better)
Translates to: NLRLLPPEERWPGRGRVPGALGP*ALLYAG
Trigger: ACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCC...TGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR GCA 90 bp ATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGACTTGCCCAAAATCTTaGAGAGAGCTGGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: IRAHAQPDGEDPQQEGTATCPKS*RELGTV
Trigger: CACGGTGCCCAGCTCTCTGCAAGATTTTGGGCAAGT...CGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp ACTAGGGCGGGTCTCGGGAGGCAAGGTAGGCAGCCAGGGTCACCAGGGCAGCCGACAGCCAAGCCGAGGTaGTCGTGGGGTAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: TRAGLGRQGRQPGSPGQPTAKPR*SWGRNG
Trigger: ACCATTTCTACCCCACGACCACCTCGGCTTGGCTGT...CGGCTGCCCTGGTGACCCTGGCTGCCTACCTTGCCTCCCGAGACCCGCCCTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp CTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCTGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LRLLPPEERWPGRGRVPVCPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...GACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: GRGRVPVQLAPVSRCSCRPPEER*PGRGRV
Trigger: AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGG...GCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCTCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LSAHRFAGLPASGFTVRAPPEER*PGRGRV
Trigger: AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGG...AGCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR CCA 90 bp CCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: PLSAHRFAGLPASGFTVRPPEER*PGRGRV
Trigger: AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGG...CCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR CCA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGACCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRPPEER*PGRGRV
Trigger: AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGG...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCGGATCCAAGGGGCGCTaGGACCTTGCGCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GRVPVQLAPVSRCSCRRRGSKGR*DLALCS
Trigger: AGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCC...GCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR CCA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCCTAGGGCGGGTCTTCTaGGCTAGACAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSLGRVF*ARQKAA
Trigger: CGCTGCCTTCTGTCTAGCCCAGAAGACCCGCCCTAG...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413014.6
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGGGAGGCGGCCCCTGAAATCTTGCAGAGAGTaGCAGACTCAGGATTTGAGT +
Preference number: 4 (lower is better)
Translates to: PARRRGPPAGRHGGRRPLKSCRE*QTQDLS
Trigger: ACTCAAATCCTGAGTCTGCCACTCTCTGCAAGATTT...CAGGGGCCGCCTCCCGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR TCA 90 bp ATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGGTCACTGTCACTGGATaGCATGTCCTCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: IRAHAQPDGEDPQQEGTAVTVTG*HVLNIR
Trigger: CCTGATGTTGAGGACATGTCATCCAGTGACAGTGAC...CGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR TCA 90 bp AGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCAGGCCGGGGCTTCCTaGACCCTCGCAATGACACTT +
Preference number: 4 (lower is better)
Translates to: RGRVPVQLAPVSRCSCRRQAGAS*TLAMTL
Trigger: AAGTGTCATTGCGAGGGTTCAGGAAGCCCCGGCCTG...GCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR TCA 90 bp GCTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACACAGGCCGGGGCTTCCTaGACCCTCGCAATGACACTT +
Preference number: 4 (lower is better)
Translates to: APAAAAASSTKILHSLPTQAGAS*TLAMTL
Trigger: AAGTGTCATTGCGAGGGTTCAGGAAGCCCCGGCCTG...TGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR TCA 90 bp CCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCCTCGTCTCCGTCTCTaGCATCTCCCCGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PGRGRVPVQLAPVSRCSCPRLRL*HLPASP
Trigger: GGGAGAGGCGGGGAGATGTCAGAGACGGAGACGAGG...GCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS-3UTR GCA 90 bp GTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGACCCCAGCTCATGCCTaGCAGGCTTCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VFNLRLLPPEERWPGRGRTPAHA*QASGQG
Trigger: CCCCTGCCCAGAAGCCTGGCAGGCATGAGCTGGGGT...CCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCATGGTGAAAGACGGCTaGCTCCATCCCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSMVKDG*LHPSPS
Trigger: ACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCAT...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCGACAGAAGGCAGCGATaGCAACGGGCCAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSDRRQR*QRARNN
Trigger: GTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTC...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSTDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: GEGFQSSSLPFLDAPAAATDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...GGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCCTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: EGEGFQSSSLPFLDAPAALCPQI*WAAGLR
Trigger: CCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG...GGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGACTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRLCPQI*WAAGLR
Trigger: CCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GCTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: APAAAAASSTKILHSLPTVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...TGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRGRVPVQLAPVSRCSCAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...GCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TCCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: STLCPQICWAAGLRVHSEAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...CTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR GCA 90 bp GGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GRVPVQLAPVSRCSCRRRLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...GCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTGGGGCGCTGGGACCTTaGGCTTTGCTCTACGCGGGT +
Preference number: 4 (lower is better)
Translates to: LPPPQPHPPRFSTLCPQIGALGP*ALLYAG
Trigger: ACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCC...AATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR GCA 90 bp TCTCCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGCACTTGCCCGGACCCTaGCACCGAGGATCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: SPLSAHRFAGLPASGFTVHLPGP*HRGSKG
Trigger: CCCCTTGGATCCTCGGTGGCAGGGTCCGGGCAAGTG...CACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000542945.5
CDS-3UTR GCA 90 bp GGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGACACTTGCCCGGACCCTaGCACCGAGGATCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: GCLVFNLRLLPPEERWPGHLPGP*HRGSKG
Trigger: CCCCTTGGATCCTCGGTGGCAGGGTCCGGGCAAGTG...TCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR GCA 90 bp CTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCTGTCCTCGCAATGACACTTaGCCGGACCCTGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: LCPQICWAAGLRVHSEGCPRNDT*PDPATE
Trigger: CTCGGTGGCAGGGTCCGGGCAAGTGTCATTGCGAGG...ACAGCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000542945.5
CDS-3UTR CCA 90 bp GGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCTGCCTGCCAGGCTTCTaGGCAGGGGTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: GEGFQSSSLPFLDAPAAACLPGF*AGVSHS
Trigger: AGAATGTGAGACCCCTGCCCAGAAGCCTGGCAGGCA...GGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CCA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCATGCCTGCCAGGCTTCTaGGCAGGGGTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: QVAAARRAVARKGKGSSPCLPGF*AGVSHS
Trigger: AGAATGTGAGACCCCTGCCCAGAAGCCTGGCAGGCA...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CCA 90 bp GAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCAACATCAGGGGGCCTTaGTTCCCCCAGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: EGEGFQSSSLPFLDAPAANIRGP*FPQASA
Trigger: AGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTT...GGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp AATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAAACATCAGGGGGCCTTaGTTCCCCCAGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: NLRLLPPEERWPGRGRVPNIRGP*FPQASA
Trigger: AGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTT...TGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATAACATCAGGGGGCCTTaGTTCCCCCAGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: PAAAAASSTKILHSLPTDNIRGP*FPQASA
Trigger: AGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTT...ATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GCAGCCAGGGTCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGCCGAGTCACTGTCACTaGATGACATGTCCTCAACAT +
Preference number: 4 (lower is better)
Translates to: AARVTRAAAYVHTPSPTAPSHCH*MTCPQH
Trigger: ATGTTGAGGACATGTCATCCAGTGACAGTGACTCGG...CGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGACCCTGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp GTGAGGGCTGTAGGGGCAACTAGGGCGGGTCTCGGGAGGCAAGGTAGGCAGCCATGGCCCAAGCCTTGTTaGTCTGTAGAGGCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VRAVGATRAGLGRQGRQPWPKPC*SVEAVG
Trigger: GCCCACTGCCTCTACAGACCAACAAGGCTTGGGCCA...TGGCTGCCTACCTTGCCTCCCGAGACCCGCCCTAGTTGCCCCTACAGCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCACCTGGATGTCCCCCTTaGCCCAAGCCTTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: QVAAARRAVARKGKGSSPPGCPP*PKPCWS
Trigger: AGACCAACAAGGCTTGGGCCAAGGGGGACATCCAGG...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp GAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCATGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: EGFQSSSLPFLDAPAAAACPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...TGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GCTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACATGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: APAAAAASSTKILHSLPTCPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...TGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGTGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LLPPPQPHPPRFSTLCPQCPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...CTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: GQEGEGFQSSSLPFLDAPPPEER*PGRGRV
Trigger: AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGG...AGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: QEGEGFQSSSLPFLDAPAPPEER*PGRGRV
Trigger: AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGG...GGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: VWCLISGCCRPKSGGQEGPPEER*PGRGRV
Trigger: AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGG...CCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR TCA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCATCCAGCAGAGGCTGTTaGAGCTCACGAAGACTAGGG +
Preference number: 4 (lower is better)
Translates to: QVAAARRAVARKGKGSSPSSRGC*SSRRLG
Trigger: CCCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGA...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR TCA 90 bp GGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCTCCAGCAGAGGCTGTTaGAGCTCACGAAGACTAGGG +
Preference number: 4 (lower is better)
Translates to: GRVPVQLAPVSRCSCRRRSSRGC*SSRRLG
Trigger: CCCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGA...GCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR TCA 90 bp AAGCCTTGTTGGTCTGTAGAGGCAGTGGGCAGCAGTGACCCAGGCATCCCCTCAGGCAGTGGGCAGCAGTaGCCCAGGCATCCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: KPCWSVEAVGSSDPGIPSGSGQQ*PRHPLS
Trigger: ACTGAGGGGATGCCTGGGTCACTGCTGCCCACTGCC...TGAGGGGATGCCTGGGTCACTGCTGCCCACTGCCTCTACAGACCAACAAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR TCA 90 bp CAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCCCTGAACCCTCGCAATaGCACTTGCCCGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: QEGEGFQSSSLPFLDAPAPEPSQ*HLPGPC
Trigger: GCAGGGTCCGGGCAAGTGTCATTGCGAGGGTTCAGG...GGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR TCA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGACAGGCCGGGGCTTCCTaGACCCTCGCAATGACACTT +
Preference number: 4 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRQAGAS*TLAMTL
Trigger: AAGTGTCATTGCGAGGGTTCAGGAAGCCCCGGCCTG...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR TCA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCGTCCCACACACAGACTaGCCTTCTGGGCTAGACAGA +
Preference number: 4 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSVPHTD*PSGLDR
Trigger: TCTGTCTAGCCCAGAAGGTCAGTCTGTGTGTGGGAC...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGGGTCTCACATTCTGTaGCCTCCAGCAGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QVAAARRAVARKGKGSSPGSHIL*PPAEAV
Trigger: AACAGCCTCTGCTGGAGGGCACAGAATGTGAGACCC...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGCTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTACCCCAGCTCATGCCTaGCAGGCTTCTGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GCKGVWCLISGCCRPKSGTPAHA*QASGQG
Trigger: CCCCTGCCCAGAAGCCTGGCAGGCATGAGCTGGGGT...ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp GAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGGCGGTGACAGGAACTaGAAACCCCTCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: EGEGFQSSSLPFLDAPAAGGDRN*KPLRDS
Trigger: CGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCC...GGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGAGGCGGTGACAGGAACTaGAAACCCCTCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRGGDRN*KPLRDS
Trigger: CGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCC...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp GGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCATGGTGAAAGACGGCTaGCTCCATCCCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GRVPVQLAPVSRCSCRRRMVKDG*LHPSPS
Trigger: ACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCAT...GCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGACAGAAGGCAGCGATaGCAACGGGCCAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: QVAAARRAVARKGKGSSPDRRQR*QRARNN
Trigger: GTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTC...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQTDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTCTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GQEGEGFQSSSLPFLDAPLCPQI*WAAGLR
Trigger: CCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG...AGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGGCAACTAGGGCGGGTCTCGGGAGGCAAGGTAGGCAGCCAGGGTCACCAGGGCAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GQLGRVSGGKVGSQGHQGRFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...GCCCTGGTGACCCTGGCTGCCTACCTTGCCTCCCGAGACCCGCCCTAGTTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp CCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: PAAAAASSTKILHSLPTDVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...ATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: PLSAHRFAGLPASGFTVRVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...CCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR GCA 90 bp GGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: GRGRVPVQLAPVSRCSCRVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...GCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGCTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGCTCCCGTTTCTAGATaGTCCTGCCGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GCKGVWCLISGCCRPKSGAPVSR*SCRRRS
Trigger: GCTGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGC...ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATGGGACCTTGCGCTTTaGTCTACGCGGGTCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRWDLAL*STRVSA
Trigger: CGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCA...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
CDS-3UTR GCA 90 bp CAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGGGCGCTGGGACCTTaGGCTTTGCTCTACGCGGGT +
Preference number: 4 (lower is better)
Translates to: QGCLVFNLRLLPPEERWPGALGP*ALLYAG
Trigger: ACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCC...TGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR GCA 90 bp GGCTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTCACTTGCCCGGACCCTaGCACCGAGGATCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: GCKGVWCLISGCCRPKSGHLPGP*HRGSKG
Trigger: CCCCTTGGATCCTCGGTGGCAGGGTCCGGGCAAGTG...ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR GCA 90 bp GTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGCCTCGCAATGACACTTaGCCGGACCCTGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: VWCLISGCCRPKSGGQEGPRNDT*PDPATE
Trigger: CTCGGTGGCAGGGTCCGGGCAAGTGTCATTGCGAGG...CCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR GCA 90 bp CTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGACCTCGCAATGACACTTaGCCGGACCCTGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: LVFNLRLLPPEERWPGRGPRNDT*PDPATE
Trigger: CTCGGTGGCAGGGTCCGGGCAAGTGTCATTGCGAGG...TCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR GCA 90 bp TGGCCCAAGCCTTGTTGGTCTGTAGAGGCAGTGGGCAGCAGTGACCCAGGCATCCCTCGCAATGACACTTaGCCGGACCCTGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: WPKPCWSVEAVGSSDPGIPRNDT*PDPATE
Trigger: CTCGGTGGCAGGGTCCGGGCAAGTGTCATTGCGAGG...GATGCCTGGGTCACTGCTGCCCACTGCCTCTACAGACCAACAAGGCTTGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542945.5
CDS-3UTR CCA 90 bp TCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTTGCCTGCCAGGCTTCTaGGCAGGGGTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: SQVAAARRAVARKGKGSSCLPGF*AGVSHS
Trigger: AGAATGTGAGACCCCTGCCCAGAAGCCTGGCAGGCA...ACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CCA 90 bp AGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCTGCCTGCCAGGCTTCTaGGCAGGGGTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: RGRVPVQLAPVSRCSCRRCLPGF*AGVSHS
Trigger: AGAATGTGAGACCCCTGCCCAGAAGCCTGGCAGGCA...GCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CCA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTGCCTGCCAGGCTTCTaGGCAGGGGTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQCLPGF*AGVSHS
Trigger: AGAATGTGAGACCCCTGCCCAGAAGCCTGGCAGGCA...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CCA 90 bp GGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAACATCAGGGGGCCTTaGTTCCCCCAGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GCLVFNLRLLPPEERWPGNIRGP*FPQASA
Trigger: AGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTT...TCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTAACATCAGGGGGCCTTaGTTCCCCCAGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GQEGEGFQSSSLPFLDAPNIRGP*FPQASA
Trigger: AGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTT...AGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCACAGCCAAGCCGAGGTaGTCGTGGGGTAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: GRVPVQLAPVSRCSCRRRTAKPR*SWGRNG
Trigger: ACCATTTCTACCCCACGACCACCTCGGCTTGGCTGT...GCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GCTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACATGGCCCAAGCCTTGTTaGTCTGTAGAGGCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: APAAAAASSTKILHSLPTWPKPC*SVEAVG
Trigger: GCCCACTGCCTCTACAGACCAACAAGGCTTGGGCCA...TGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGCCTGGATGTCCCCCTTaGCCCAAGCCTTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQPGCPP*PKPCWS
Trigger: AGACCAACAAGGCTTGGGCCAAGGGGGACATCCAGG...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp GCTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACACCTGGATGTCCCCCTTaGCCCAAGCCTTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: APAAAAASSTKILHSLPTPGCPP*PKPCWS
Trigger: AGACCAACAAGGCTTGGGCCAAGGGGGACATCCAGG...TGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp AATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCATGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: NLRLLPPEERWPGRGRVPCPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...TGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GGCTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: GCKGVWCLISGCCRPKSGPPEER*PGRGRV
Trigger: AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGG...ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CCA 90 bp TTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCGCCCGAAGAGCGGTaGCCAGGAAGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: FNLRLLPPEERWPGRGRVPPEER*PGRGRV
Trigger: AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGG...AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp TGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTCGACTCCCGGGGGTCTaGGAGCAGGCGGGAATCCTT +
Preference number: 4 (lower is better)
Translates to: CRRRSLIHQDSPLSAHRFRLPGV*EQAGIL
Trigger: AAGGATTCCCGCCTGCTCCCAGACCCCCGGGAGTCG...AAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS-3UTR CCA 90 bp GGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCGGATCCAAGGGGCGCTaGGACCTTGCGCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GRGRVPVQLAPVSRCSCRGSKGR*DLALCS
Trigger: AGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCC...GCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR CCA 90 bp GAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGGATCCAAGGGGCGCTaGGACCTTGCGCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: EGEGFQSSSLPFLDAPAAGSKGR*DLALCS
Trigger: AGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCC...GGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR CCA 90 bp CCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATCTAGGGCGGGTCTTCTaGGCTAGACAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PAAAAASSTKILHSLPTDLGRVF*ARQKAA
Trigger: CGCTGCCTTCTGTCTAGCCCAGAAGACCCGCCCTAG...ATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413014.6
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CCA 90 bp TCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCACTTTCTGTCCACGCATaGGTCTCCTGGTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SPGQPHTCTRPARRRGPPLSVHA*VSWFLS
Trigger: AGACAAAAACCAGGAGACCCATGCGTGGACAGAAAG...TGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS-3UTR TCA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCGTCACTGTCACTGGATaGCATGTCCTCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSVTVTG*HVLNIR
Trigger: CCTGATGTTGAGGACATGTCATCCAGTGACAGTGAC...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GCTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGGGTCTCACATTCTGTaGCCTCCAGCAGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: APAAAAASSTKILHSLPTGSHIL*PPAEAV
Trigger: AACAGCCTCTGCTGGAGGGCACAGAATGTGAGACCC...TGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTGGCGGTGACAGGAACTaGAAACCCCTCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: LPPPQPHPPRFSTLCPQIGGDRN*KPLRDS
Trigger: CGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCC...AATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp GTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGGCGGTGACAGGAACTaGAAACCCCTCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: VWCLISGCCRPKSGGQEGGGDRN*KPLRDS
Trigger: CGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCC...CCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp GAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCAGACAGAAGGCAGCGATaGCAACGGGCCAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: EGFQSSSLPFLDAPAAAADRRQR*QRARNN
Trigger: GTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTC...TGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: PAAAAASSTKILHSLPTDTDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...ATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LQGCLVFNLRLLPPEERWLCPQI*WAAGLR
Trigger: CCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG...CCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp GGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: GCLVFNLRLLPPEERWPGVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...TCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: AAAAASSTKILHSLPTDLVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...CAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GRGRVPVQLAPVSRCSCRLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...GCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCTGTTTAATCTCAGGTTaGTGCCGCCCGAAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: GEGFQSSSLPFLDAPAAACLISG*CRPKSG
Trigger: ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACA...GGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCATGTTTAATCTCAGGTTaGTGCCGCCCGAAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: QVAAARRAVARKGKGSSPCLISG*CRPKSG
Trigger: ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACA...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTTGTTTAATCTCAGGTTaGTGCCGCCCGAAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: VAAARRAVARKGKGSSPACLISG*CRPKSG
Trigger: ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACA...AGCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGTGGGACCTTGCGCTTTaGTCTACGCGGGTCTCAGCG +
Preference number: 4 (lower is better)
Translates to: VFNLRLLPPEERWPGRGRWDLAL*STRVSA
Trigger: CGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCA...CCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
CDS-3UTR GCA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCCTCCACGGTCCTGTTaGCTCGTCTCCGTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFPPRSC*LVSVSD
Trigger: GTCAGAGACGGAGACGAGGCAACAGGACCGTGGAGG...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS-3UTR CCA 90 bp AATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGGCTGTCCATGGCTTTaGGGAAACTCCAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NLRLLPPEERWPGRGRVPGCPWL*GNSRRG
Trigger: ACCCCTCCTGGAGTTTCCCCAAAGCCATGGACAGCC...TGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATGGCTGTCCATGGCTTTaGGGAAACTCCAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PAAAAASSTKILHSLPTDGCPWL*GNSRRG
Trigger: ACCCCTCCTGGAGTTTCCCCAAAGCCATGGACAGCC...ATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTGCCTGCCAGGCTTCTaGGCAGGGGTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: PAAAAASSTKILHSLPTDCLPGF*AGVSHS
Trigger: AGAATGTGAGACCCCTGCCCAGAAGCCTGGCAGGCA...ATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CCA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATGCCTGCCAGGCTTCTaGGCAGGGGTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRCLPGF*AGVSHS
Trigger: AGAATGTGAGACCCCTGCCCAGAAGCCTGGCAGGCA...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CCA 90 bp TGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAAACATCAGGGGGCCTTaGTTCCCCCAGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: WCLISGCCRPKSGGQEGENIRGP*FPQASA
Trigger: AGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTT...TTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp AAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGAACATCAGGGGGCCTTaGTTCCCCCAGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: KGVWCLISGCCRPKSGGQNIRGP*FPQASA
Trigger: AGCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTT...CTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp TCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTACAGCCAAGCCGAGGTaGTCGTGGGGTAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: SQVAAARRAVARKGKGSSTAKPR*SWGRNG
Trigger: ACCATTTCTACCCCACGACCACCTCGGCTTGGCTGT...ACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGTGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: AAAAASSTKILHSLPTDLCPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...CAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGTGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: VWCLISGCCRPKSGGQEGCPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...CCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp TCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCTGTATGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SAHRFAGLPASGFTVRAVCPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...TACAGCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR CCA 90 bp TCCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGCAGGCGGGAATCCTTaGAGAACTGCAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: STLCPQICWAAGLRVHSEAGGNP*RTAAPS
Trigger: GGAAGGGGCTGCAGTTCTCCAAGGATTCCCGCCTGC...CTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS-3UTR CCA 90 bp AGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCGCCTTGTTGGTCTTCTaGGCTAGACAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RGRVPVQLAPVSRCSCRRALLVF*ARQKAA
Trigger: CGCTGCCTTCTGTCTAGCCCAGAAGACCAACAAGGC...GCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS-3UTR TCA 90 bp CCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTCCAGCAGAGGCTGTTaGAGCTCACGAAGACTAGGG +
Preference number: 4 (lower is better)
Translates to: PAAAAASSTKILHSLPTDSSRGC*SSRRLG
Trigger: CCCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGA...ATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR TCA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGTCACTGTCACTGGATaGCATGTCCTCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: QVAAARRAVARKGKGSSPVTVTG*HVLNIR
Trigger: CCTGATGTTGAGGACATGTCATCCAGTGACAGTGAC...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR TCA 90 bp TTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCAGGCCGGGGCTTCCTaGACCCTCGCAATGACACTT +
Preference number: 4 (lower is better)
Translates to: FNLRLLPPEERWPGRGRVQAGAS*TLAMTL
Trigger: AAGTGTCATTGCGAGGGTTCAGGAAGCCCCGGCCTG...AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR TCA 90 bp TGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAACAGGCCGGGGCTTCCTaGACCCTCGCAATGACACTT +
Preference number: 4 (lower is better)
Translates to: WCLISGCCRPKSGGQEGEQAGAS*TLAMTL
Trigger: AAGTGTCATTGCGAGGGTTCAGGAAGCCCCGGCCTG...TTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR GCA 90 bp AATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGGGTCTCACATTCTGTaGCCTCCAGCAGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: NLRLLPPEERWPGRGRVPGSHIL*PPAEAV
Trigger: AACAGCCTCTGCTGGAGGGCACAGAATGTGAGACCC...TGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR GCA 90 bp AAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGGCGGTGACAGGAACTaGAAACCCCTCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: KGVWCLISGCCRPKSGGQGGDRN*KPLRDS
Trigger: CGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCC...CTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp TGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGCGGTGACAGGAACTaGAAACCCCTCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: WCLISGCCRPKSGGQEGEGGDRN*KPLRDS
Trigger: CGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCC...TTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp TGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGGCGGTGACAGGAACTaGAAACCCCTCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: CRRRSLIHQDSPLSAHRFGGDRN*KPLRDS
Trigger: CGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCC...AAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp CTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCTATGGTGAAAGACGGCTaGCTCCATCCCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LSAHRFAGLPASGFTVRAMVKDG*LHPSPS
Trigger: ACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCAT...AGCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR GCA 90 bp CTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: LPPPQPHPPRFSTLCPQITDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...AATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: AAAAASSTKILHSLPTDLTDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...CAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: GQEGEGFQSSSLPFLDAPTDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...AGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: WCLISGCCRPKSGGQEGEVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...TTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGTTTCTAGATGCTCCTaGCGCCGCCGCAGCCTCATC +
Preference number: 4 (lower is better)
Translates to: CRRRSLIHQDSPLSAHRFVSRCS*RRRSLI
Trigger: GATGAGGCTGCGGCGGCGGCAGGAGCATCTAGAAAC...AAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGRGRVPVQLAPVSRCSCLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...GCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GQEGEGFQSSSLPFLDAPLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...AGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGAATCCTTGGAGAACTaGAGCCCCTTCCTCGTGAGC +
Preference number: 4 (lower is better)
Translates to: EGEGFQSSSLPFLDAPAAESLEN*SPFLVS
Trigger: GCTCACGAGGAAGGGGCTGCAGTTCTCCAAGGATTC...GGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS-3UTR CCA 90 bp TCTCCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGGGCTGTCCATGGCTTTaGGGAAACTCCAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SPLSAHRFAGLPASGFTVGCPWL*GNSRRG
Trigger: ACCCCTCCTGGAGTTTCCCCAAAGCCATGGACAGCC...CACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCCCGAGTCACTGTCACTaGATGACATGTCCTCAACAT +
Preference number: 4 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSPSHCH*MTCPQH
Trigger: ATGTTGAGGACATGTCATCCAGTGACAGTGACTCGG...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCAAGCCGAGGTGGTCGTaGGGTAGAAATGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GEGFQSSSLPFLDAPAAAKPRWS*GRNGER
Trigger: TCTTTCACCATTTCTACCCCACGACCACCTCGGCTT...GGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTAAGCCGAGGTGGTCGTaGGGTAGAAATGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: VAAARRAVARKGKGSSPAKPRWS*GRNGER
Trigger: TCTTTCACCATTTCTACCCCACGACCACCTCGGCTT...AGCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGACAGCCAAGCCGAGGTaGTCGTGGGGTAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: PLSAHRFAGLPASGFTVRTAKPR*SWGRNG
Trigger: ACCATTTCTACCCCACGACCACCTCGGCTTGGCTGT...CCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR CCA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGAACAGCCAAGCCGAGGTaGTCGTGGGGTAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRTAKPR*SWGRNG
Trigger: ACCATTTCTACCCCACGACCACCTCGGCTTGGCTGT...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp AATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAACAGCCAAGCCGAGGTaGTCGTGGGGTAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: NLRLLPPEERWPGRGRVPTAKPR*SWGRNG
Trigger: ACCATTTCTACCCCACGACCACCTCGGCTTGGCTGT...TGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp TCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCTGTACACTGGGGATGCTTCTaGGCTAGACAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SAHRFAGLPASGFTVRAVHWGCF*ARQKAA
Trigger: CGCTGCCTTCTGTCTAGCCCAGAAGCATCCCCAGTG...TACAGCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000535712.1
ENST00000546362.5
CDS-3UTR CCA 90 bp CTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTCACTGGGGATGCTTCTaGGCTAGACAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LPPPQPHPPRFSTLCPQIHWGCF*ARQKAA
Trigger: CGCTGCCTTCTGTCTAGCCCAGAAGCATCCCCAGTG...AATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000535712.1
ENST00000546362.5
CDS-3UTR CCA 90 bp GCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGCACTGGGGATGCTTCTaGGCTAGACAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: AAAAASSTKILHSLPTDLHWGCF*ARQKAA
Trigger: CGCTGCCTTCTGTCTAGCCCAGAAGCATCCCCAGTG...CAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000535712.1
ENST00000546362.5
CDS-3UTR CCA 90 bp CTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGACCTGGATGTCCCCCTTaGCCCAAGCCTTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LVFNLRLLPPEERWPGRGPGCPP*PKPCWS
Trigger: AGACCAACAAGGCTTGGGCCAAGGGGGACATCCAGG...TCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
CDS-3UTR CCA 90 bp CAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCATGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: QGCLVFNLRLLPPEERWPCPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...TGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp AAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGTGCCCACAGATTTGCTaGGCTGCCGGCCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: KGVWCLISGCCRPKSGGQCPQIC*AAGLRV
Trigger: AACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCA...CTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp TTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTGGATCCAAGGGGCGCTaGGACCTTGCGCTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: FNLRLLPPEERWPGRGRVGSKGR*DLALCS
Trigger: AGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCC...AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR CCA 90 bp GAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCATGGCCCAAGCCTTGTTaGTCTTCTGGGCTAGACAGA +
Preference number: 4 (lower is better)
Translates to: EGFQSSSLPFLDAPAAAAWPKPC*SSGLDR
Trigger: TCTGTCTAGCCCAGAAGACCAACAAGGCTTGGGCCA...TGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS-3UTR CCA 90 bp CTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTCACAGTGAGGGCTTCTaGGCTAGACAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LPPPQPHPPRFSTLCPQIHSEGF*ARQKAA
Trigger: CGCTGCCTTCTGTCTAGCCCAGAAGCCCTCACTGTG...AATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436170.6
CDS-3UTR CCA 90 bp TGGCCCAAGCCTTGTTGGTCTGTAGAGGCAGTGGGCAGCAGTGACCCAGGCATCAATCTTGCAGAGAGCTaGGCACCGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: WPKPCWSVEAVGSSDPGINLAES*APWLTP
Trigger: AGGCGTGAGCCACGGTGCCCAGCTCTCTGCAAGATT...GATGCCTGGGTCACTGCTGCCCACTGCCTCTACAGACCAACAAGGCTTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR TCA 90 bp CAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGTCCCACACACAGACTaGCCTTCTGGGCTAGACAGA +
Preference number: 4 (lower is better)
Translates to: QEGEGFQSSSLPFLDAPAVPHTD*PSGLDR
Trigger: TCTGTCTAGCCCAGAAGGTCAGTCTGTGTGTGGGAC...GGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR TCA 90 bp ACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCGGCAGACTCAGGATTTaGGTTCAGGTTCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TLCPQICWAAGLRVHSEGGRLRI*VQVLWA
Trigger: AGCCCAGAGAACCTGAACTCAAATCCTGAGTCTGCC...GCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp GTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGGGTCTCACATTCTGTaGCCTCCAGCAGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: VWCLISGCCRPKSGGQEGGSHIL*PPAEAV
Trigger: AACAGCCTCTGCTGGAGGGCACAGAATGTGAGACCC...CCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAATGGTGAAAGACGGCTaGCTCCATCCCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LVFNLRLLPPEERWPGRGMVKDG*LHPSPS
Trigger: ACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCAT...TCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTATGGTGAAAGACGGCTaGCTCCATCCCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LPPPQPHPPRFSTLCPQIMVKDG*LHPSPS
Trigger: ACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCAT...AATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGATGGTGAAAGACGGCTaGCTCCATCCCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: VFNLRLLPPEERWPGRGRMVKDG*LHPSPS
Trigger: ACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCAT...CCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCATGGTGAAAGACGGCTaGCTCCATCCCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFMVKDG*LHPSPS
Trigger: ACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCAT...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TCCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGACAGAAGGCAGCGATaGCAACGGGCCAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: STLCPQICWAAGLRVHSEDRRQR*QRARNN
Trigger: GTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTC...CTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR GCA 90 bp GTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGACAGAAGGCAGCGATaGCAACGGGCCAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: VWCLISGCCRPKSGGQEGDRRQR*QRARNN
Trigger: GTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTC...CCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCGACAGAAGGCAGCGATaGCAACGGGCCAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFDRRQR*QRARNN
Trigger: GTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTC...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGACAGAAGGCAGCGATaGCAACGGGCCAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: QEGEGFQSSSLPFLDAPADRRQR*QRARNN
Trigger: GTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTC...GGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: CRRRSLIHQDSPLSAHRFTDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...AAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: LQGCLVFNLRLLPPEERWTDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...CCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR GCA 90 bp AAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGACAGATTTGCTGGGCTaGCGGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: KGVWCLISGCCRPKSGGQTDLLG*RPQGSQ
Trigger: CTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGT...CTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp AGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RGRVPVQLAPVSRCSCRRRFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...GCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCAAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EGFQSSSLPFLDAPAAAARFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...TGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCATTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: QGCLVFNLRLLPPEERWPLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...TGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: FNLRLLPPEERWPGRGRVLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp AAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: KGVWCLISGCCRPKSGGQLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...CTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: CRRRSLIHQDSPLSAHRFLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...AAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATGTTTAATCTCAGGTTaGTGCCGCCCGAAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRCLISG*CRPKSG
Trigger: ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACA...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCTGTTTAATCTCAGGTTaGTGCCGCCCGAAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: GRGRVPVQLAPVSRCSCRCLISG*CRPKSG
Trigger: ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACA...GCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp ACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCACTTGCCCAAAATCTTaGAGAGAGCTGGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: TLCPQICWAAGLRVHSEGTCPKS*RELGTV
Trigger: CACGGTGCCCAGCTCTCTGCAAGATTTTGGGCAAGT...GCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp CTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGGGCTGTCCATGGCTTTaGGGAAACTCCAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LQGCLVFNLRLLPPEERWGCPWL*GNSRRG
Trigger: ACCCCTCCTGGAGTTTCCCCAAAGCCATGGACAGCC...CCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GGCTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTTGCCTGCCAGGCTTCTaGGCAGGGGTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: GCKGVWCLISGCCRPKSGCLPGF*AGVSHS
Trigger: AGAATGTGAGACCCCTGCCCAGAAGCCTGGCAGGCA...ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CCA 90 bp AAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGTGCCTGCCAGGCTTCTaGGCAGGGGTCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: KGVWCLISGCCRPKSGGQCLPGF*AGVSHS
Trigger: AGAATGTGAGACCCCTGCCCAGAAGCCTGGCAGGCA...CTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CCA 90 bp GTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCCGAGTCACTGTCACTaGATGACATGTCCTCAACAT +
Preference number: 4 (lower is better)
Translates to: VAAARRAVARKGKGSSPAPSHCH*MTCPQH
Trigger: ATGTTGAGGACATGTCATCCAGTGACAGTGACTCGG...AGCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCAAAGCCGAGGTGGTCGTaGGGTAGAAATGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: EGFQSSSLPFLDAPAAAAKPRWS*GRNGER
Trigger: TCTTTCACCATTTCTACCCCACGACCACCTCGGCTT...TGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGAAGCCGAGGTGGTCGTaGGGTAGAAATGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: LLPPPQPHPPRFSTLCPQKPRWS*GRNGER
Trigger: TCTTTCACCATTTCTACCCCACGACCACCTCGGCTT...CTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp GCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGACAGCCAAGCCGAGGTaGTCGTGGGGTAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: AAAAASSTKILHSLPTDLTAKPR*SWGRNG
Trigger: ACCATTTCTACCCCACGACCACCTCGGCTTGGCTGT...CAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCACAGCCAAGCCGAGGTaGTCGTGGGGTAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: QEGEGFQSSSLPFLDAPATAKPR*SWGRNG
Trigger: ACCATTTCTACCCCACGACCACCTCGGCTTGGCTGT...GGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCTGTAGGGGCAACTTCTaGGCTAGACAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFCRGNF*ARQKAA
Trigger: CGCTGCCTTCTGTCTAGCCCAGAAGTTGCCCCTACA...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447302.6
CDS-3UTR CCA 90 bp GTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGCACAGACTGACCTTCTaGGCTAGACAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VFNLRLLPPEERWPGRGRHRLTF*ARQKAA
Trigger: CGCTGCCTTCTGTCTAGCCCAGAAGGTCAGTCTGTG...CCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS-3UTR CCA 90 bp GGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTCACAGACTGACCTTCTaGGCTAGACAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GQEGEGFQSSSLPFLDAPHRLTF*ARQKAA
Trigger: CGCTGCCTTCTGTCTAGCCCAGAAGGTCAGTCTGTG...AGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR TCA 90 bp CAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCATCCAGCAGAGGCTGTTaGAGCTCACGAAGACTAGGG +
Preference number: 4 (lower is better)
Translates to: QGCLVFNLRLLPPEERWPSSRGC*SSRRLG
Trigger: CCCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGA...TGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR TCA 90 bp CCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATGTCACTGTCACTGGATaGCATGTCCTCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: PAAAAASSTKILHSLPTDVTVTG*HVLNIR
Trigger: CCTGATGTTGAGGACATGTCATCCAGTGACAGTGAC...ATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR TCA 90 bp GGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCGTCACTGTCACTGGATaGCATGTCCTCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: GRGRVPVQLAPVSRCSCRVTVTG*HVLNIR
Trigger: CCTGATGTTGAGGACATGTCATCCAGTGACAGTGAC...GCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR TCA 90 bp GGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGGCAGACTCAGGATTTaGGTTCAGGTTCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GQEGEGFQSSSLPFLDAPGRLRI*VQVLWA
Trigger: AGCCCAGAGAACCTGAACTCAAATCCTGAGTCTGCC...AGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp CTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGGGGTCTCACATTCTGTaGCCTCCAGCAGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LQGCLVFNLRLLPPEERWGSHIL*PPAEAV
Trigger: AACAGCCTCTGCTGGAGGGCACAGAATGTGAGACCC...CCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAATGGTGAAAGACGGCTaGCTCCATCCCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: WCLISGCCRPKSGGQEGEMVKDG*LHPSPS
Trigger: ACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCAT...TTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGGACAGAAGGCAGCGATaGCAACGGGCCAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: LQGCLVFNLRLLPPEERWDRRQR*QRARNN
Trigger: GTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTC...CCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCTAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSAHRFAGLPASGFTVRARFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...AGCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR GCA 90 bp CTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCTGTAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LCPQICWAAGLRVHSEGCRFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...ACAGCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR GCA 90 bp GAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EGEGFQSSSLPFLDAPAARFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...GGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp AATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NLRLLPPEERWPGRGRVPRFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...TGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCTGTTTAATCTCAGGTTaGTGCCGCCCGAAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFCLISG*CRPKSG
Trigger: ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACA...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp CTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGATGTTTAATCTCAGGTTaGTGCCGCCCGAAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: LVFNLRLLPPEERWPGRGCLISG*CRPKSG
Trigger: ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACA...TCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TCTCCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGTGTTTAATCTCAGGTTaGTGCCGCCCGAAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: SPLSAHRFAGLPASGFTVCLISG*CRPKSG
Trigger: ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACA...CACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000546362.5
CDS-3UTR GCA 90 bp TCCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGTGTTTAATCTCAGGTTaGTGCCGCCCGAAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: STLCPQICWAAGLRVHSECLISG*CRPKSG
Trigger: ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACA...CTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000546362.5
CDS-3UTR GCA 90 bp GGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTTGTTTAATCTCAGGTTaGTGCCGCCCGAAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: GQEGEGFQSSSLPFLDAPCLISG*CRPKSG
Trigger: ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACA...AGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGAAAGCCGAGGTGGTCGTaGGGTAGAAATGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRKPRWS*GRNGER
Trigger: TCTTTCACCATTTCTACCCCACGACCACCTCGGCTT...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp TGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAACAGCCAAGCCGAGGTaGTCGTGGGGTAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: WCLISGCCRPKSGGQEGETAKPR*SWGRNG
Trigger: ACCATTTCTACCCCACGACCACCTCGGCTTGGCTGT...TTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp TCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCCGCCTCAGGTATATaGCTCTTTGTTTTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SQVAAARRAVARKGKGSSPASGI*LFVFVV
Trigger: CACCACAAAAACAAAGAGCCATATACCTGAGGCGGG...ACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR TCA 90 bp CAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGTCACTGTCACTGGATaGCATGTCCTCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: QEGEGFQSSSLPFLDAPAVTVTG*HVLNIR
Trigger: CCTGATGTTGAGGACATGTCATCCAGTGACAGTGAC...GGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR TCA 90 bp GCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGGTCACTGTCACTGGATaGCATGTCCTCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: AAAAASSTKILHSLPTDLVTVTG*HVLNIR
Trigger: CCTGATGTTGAGGACATGTCATCCAGTGACAGTGAC...CAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR TCA 90 bp CTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAGTCACTGTCACTGGATaGCATGTCCTCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: LVFNLRLLPPEERWPGRGVTVTG*HVLNIR
Trigger: CCTGATGTTGAGGACATGTCATCCAGTGACAGTGAC...TCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR TCA 90 bp TCTCCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGGTCACTGTCACTGGATaGCATGTCCTCAACATCAGG +
Preference number: 4 (lower is better)
Translates to: SPLSAHRFAGLPASGFTVVTVTG*HVLNIR
Trigger: CCTGATGTTGAGGACATGTCATCCAGTGACAGTGAC...CACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR TCA 90 bp CAAAAGCAGATACGTAGCACCTACTATAGGTCAGGCACTGGGGATGCTGAGTGGCCTGAACCCTCGCAATaGCACTTGCCCGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: QKQIRSTYYRSGTGDAEWPEPSQ*HLPGPC
Trigger: GCAGGGTCCGGGCAAGTGTCATTGCGAGGGTTCAGG...CCACTCAGCATCCCCAGTGCCTGACCTATAGTAGGTGCTACGTATCTGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542945.5
CDS-3UTR GCA 90 bp GTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VWCLISGCCRPKSGGQEGRFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...CCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GQEGEGFQSSSLPFLDAPRFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...AGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGAGATTCTCCACTCTCTaGCCACAGATTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AAAAASSTKILHSLPTDLRFSTL*PQICWA
Trigger: AGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCT...CAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp TGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAATGTTTAATCTCAGGTTaGTGCCGCCCGAAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: WCLISGCCRPKSGGQEGECLISG*CRPKSG
Trigger: ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACA...TTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR GCA 90 bp GTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGCTTCTCCCCAACAAATaGACATGTGTCTCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: VWCLISGCCRPKSGGQEGLLPNK*TCVSSR
Trigger: GCGAGACGAGACACATGTGCATTTGTTGGGGAGAAG...CCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS-3UTR CCA 90 bp CTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCTGTCCGAGTCACTGTCACTaGATGACATGTCCTCAACAT +
Preference number: 4 (lower is better)
Translates to: LCPQICWAAGLRVHSEGCPSHCH*MTCPQH
Trigger: ATGTTGAGGACATGTCATCCAGTGACAGTGACTCGG...ACAGCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
ENST00000542945.5
ENST00000546362.5
CDS-3UTR CCA 90 bp GGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTAAGCCGAGGTGGTCGTaGGGTAGAAATGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GQEGEGFQSSSLPFLDAPKPRWS*GRNGER
Trigger: TCTTTCACCATTTCTACCCCACGACCACCTCGGCTT...AGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CCTTGTTGGTCTGTAGAGGCAGTGGGCAGCAGTGACCCAGGCATCCCCTCAGTCCACGCATGGGTCTCCTaGTTTTTGTCTCTCCGACTA +
Preference number: 4 (lower is better)
Translates to: PCWSVEAVGSSDPGIPSVHAWVS*FLSLRL
Trigger: TAGTCGGAGAGACAAAAACCAGGAGACCCATGCGTG...GACTGAGGGGATGCCTGGGTCACTGCTGCCCACTGCCTCTACAGACCAACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS-3UTR TCA 90 bp GGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCACAGGGAAGTTAAGTaGCTTGCCCAAAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: GRGRVPVQLAPVSRCSCRHREVK*LAQNLA
Trigger: TGCAAGATTTTGGGCAAGTCACTTAACTTCCCTGTG...GCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp AAGCCTTGTTGGTCTGTAGAGGCAGTGGGCAGCAGTGACCCAGGCATCCCCTCAACGTGTCTCCCCATCTaGCTCTTTCTTTTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: KPCWSVEAVGSSDPGIPSTCLPI*LFLFVS
Trigger: GGAGACGAAAAGAAAGAGGCAGATGGGGAGACACGT...TGAGGGGATGCCTGGGTCACTGCTGCCCACTGCCTCTACAGACCAACAAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS-3UTR CCA 90 bp GGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTCCGAGTCACTGTCACTaGATGACATGTCCTCAACAT +
Preference number: 4 (lower is better)
Translates to: GQEGEGFQSSSLPFLDAPPSHCH*MTCPQH
Trigger: ATGTTGAGGACATGTCATCCAGTGACAGTGACTCGG...AGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCCCGAGTCACTGTCACTaGATGACATGTCCTCAACAT +
Preference number: 4 (lower is better)
Translates to: QEGEGFQSSSLPFLDAPAPSHCH*MTCPQH
Trigger: ATGTTGAGGACATGTCATCCAGTGACAGTGACTCGG...GGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAAAGCCGAGGTGGTCGTaGGGTAGAAATGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: QGCLVFNLRLLPPEERWPKPRWS*GRNGER
Trigger: TCTTTCACCATTTCTACCCCACGACCACCTCGGCTT...TGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR TCA 90 bp CTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTCACAGGGAAGTTAAGTaGCTTGCCCAAAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: LPPPQPHPPRFSTLCPQIHREVK*LAQNLA
Trigger: TGCAAGATTTTGGGCAAGTCACTTAACTTCCCTGTG...AATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp CAAAAGCAGATACGTAGCACCTACTATAGGTCAGGCACTGGGGATGCTGAGTGGTTAATCTCAGGTTGCTaGCGCCCGAAGAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: QKQIRSTYYRSGTGDAEWLISGC*RPKSGG
Trigger: GCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA...CCACTCAGCATCCCCAGTGCCTGACCTATAGTAGGTGCTACGTATCTGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp TGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTCCGAGTCACTGTCACTaGATGACATGTCCTCAACAT +
Preference number: 4 (lower is better)
Translates to: CRRRSLIHQDSPLSAHRFPSHCH*MTCPQH
Trigger: ATGTTGAGGACATGTCATCCAGTGACAGTGACTCGG...AAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CCA 90 bp CAGACTCAGGATTTGAGTTCAGGTTCTCTGGGCTACCTTCCACCTTCCCGCCTCAAGCCGAGGTGGTCGTaGGGTAGAAATGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: QTQDLSSGSLGYLPPSRLKPRWS*GRNGER
Trigger: TCTTTCACCATTTCTACCCCACGACCACCTCGGCTT...GAGGCGGGAAGGTGGAAGGTAGCCCAGAGAACCTGAACTCAAATCCTGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp CCTTGTTGGTCTGTAGAGGCAGTGGGCAGCAGTGACCCAGGCATCCCCTCAGTCAAATCTTGCAGAGAGTaGCAGACTCAGGATTTGAGT +
Preference number: 4 (lower is better)
Translates to: PCWSVEAVGSSDPGIPSVKSCRE*QTQDLS
Trigger: ACTCAAATCCTGAGTCTGCCACTCTCTGCAAGATTT...GACTGAGGGGATGCCTGGGTCACTGCTGCCCACTGCCTCTACAGACCAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR GCA 90 bp ATGTATTCCAAAAGCAGATACGTAGCACCTACTATAGGTCAGGCACTGGGGATGCCGCCTCTCCCTCTCTaGATCACCCTCCAACCCTTC +
Preference number: 4 (lower is better)
Translates to: MYSKSRYVAPTIGQALGMPPLPL*ITLQPF
Trigger: GAAGGGTTGGAGGGTGATGCAGAGAGGGAGAGGCGG...CATCCCCAGTGCCTGACCTATAGTAGGTGCTACGTATCTGCTTTTGGAATACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS-3UTR CCA 90 bp TTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTTTTCCTTATCTTCCGTaGCTTCACCTTCGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: FNLRLLPPEERWPGRGRVFPYLP*LHLRCR
Trigger: TCTACAACGAAGGTGAAGCCACGGAAGATAAGGAAA...AACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS-3UTR CCA 90 bp CAAAAGCAGATACGTAGCACCTACTATAGGTCAGGCACTGGGGATGCTGAGTGGAAGCCGAGGTGGTCGTaGGGTAGAAATGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: QKQIRSTYYRSGTGDAEWKPRWS*GRNGER
Trigger: TCTTTCACCATTTCTACCCCACGACCACCTCGGCTT...CCACTCAGCATCCCCAGTGCCTGACCTATAGTAGGTGCTACGTATCTGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CCA 90 bp ATGTATTCCAAAAGCAGATACGTAGCACCTACTATAGGTCAGGCACTGGGGATGAATCTTGCAGAGAGCTaGGCACCGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: MYSKSRYVAPTIGQALGMNLAES*APWLTP
Trigger: AGGCGTGAGCCACGGTGCCCAGCTCTCTGCAAGATT...CATCCCCAGTGCCTGACCTATAGTAGGTGCTACGTATCTGCTTTTGGAATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS GCA 90 bp GGACCCTGCCACCGAGGATCCAAGGGGCGCTGGGACCTTGCGCTTTaGTCTACGCGGGTCTCAGCGCCCCGGGCCCGCTGCGCGCGGGGG +
Preference number: 5 (lower is better)
Translates to: GPCHRGSKGRWDLAL*STRVSAPRARCARG
Trigger: CCCCCGCGCGCAGCGGGCCCGGGGCGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCCTCGGTGGCAGGGTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS GCA 90 bp CTTGCCCGGACCCTGCCACCGAGGATCCAAGGGGCGCTGGGACCTTaGGCTTTGCTCTACGCGGGTCTCAGCGCCCCGGGCCCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: LARTLPPRIQGALGP*ALLYAGLSAPGPLR
Trigger: GCGCAGCGGGCCCGGGGCGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCCTCGGTGGCAGGGTCCGGGCAAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS-3UTR CAA 90 bp CCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACCAACATCAGGGGGCCTaGGTTCCCCCAGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: PHTCTRPARRRGPPAGRHQHQGA*VPPGQR
Trigger: GCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTTG...GTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp ATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGCAACATCAGGGGGCCTaGGTTCCCCCAGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: IRAHAQPDGEDPQQEGTAQHQGA*VPPGQR
Trigger: GCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTTG...CGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp CAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGCGGGAGGCGGCCCCTGCCCCTTGGCCCAAGCCTaGTTGGTCTGTAGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: QPDGEDPQQEGTAGGGPCPLAQA*LVCRGS
Trigger: ACTGCCTCTACAGACCAACAAGGCTTGGGCCAAGGG...GCAGGGGCCGCCTCCCGCCGTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS TCA 90 bp GGCTTCCCAGGCTCTGTCCCTCCGCGGCGTCCGGCGAGGGATCCCTaGAAGCCGACGTCAGCGTCCAGGAACGGGTTCCTACGACTCCCG +
Preference number: 5 (lower is better)
Translates to: GFPGSVPPRRPARDP*KPTSASRNGFLRLP
Trigger: CGGGAGTCGTAGGAACCCGTTCCTGGACGCTGACGTCGGCTTTCAGGGATCCCTCGCCGGACGCCGCGGAGGGACAGAGCCTGGGAAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS-3UTR CAA 90 bp TCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCACCCTGGATGTCCCCCTaGGCCCAAGCCTTGTTGGTC +
Preference number: 5 (lower is better)
Translates to: SPGQPHTCTRPARRRGPPPWMSP*AQALLV
Trigger: GACCAACAAGGCTTGGGCCAAGGGGGACATCCAGGG...TGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp GGGCAACTAGGGCGGGTCTCGGGAGGCAAGGTAGGCAGCCAGGGTCACCAGGGCTCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GQLGRVSGGKVGSQGHQGSLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...GCCCTGGTGACCCTGGCTGCCTACCTTGCCTCCCGAGACCCGCCCTAGTTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCGGGCTGTCCATGGCTTaGGGGAAACTCCAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSGLSMA*GKLQEG
Trigger: CCCCTCCTGGAGTTTCCCCAAAGCCATGGACAGCCC...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGACTCCAGCAGAGGCTGTaGAAGCTCACGAAGACTAGG +
Preference number: 5 (lower is better)
Translates to: GQPHTCTRPARRRGPPAGLQQRL*KLTKTR
Trigger: CCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGAG...TCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp CTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGCAACATCAGGGGGCCTaGGTTCCCCCAGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: LLPPPQPHPPRFSTLCPQQHQGA*VPPGQR
Trigger: GCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTTG...CTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGCAACATCAGGGGGCCTaGGTTCCCCCAGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQQHQGA*VPPGQR
Trigger: GCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTTG...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCACAACATCAGGGGGCCTaGGTTCCCCCAGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: EGFQSSSLPFLDAPAAAAQHQGA*VPPGQR
Trigger: GCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTTG...TGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp AGCCAGGGTCACCAGGGCAGCCGCATACGTGCACACGCCCAGCCCGACGGCGAGCCCTTGGCCCAAGCCTaGTTGGTCTGTAGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SQGHQGSRIRAHAQPDGEPLAQA*LVCRGS
Trigger: ACTGCCTCTACAGACCAACAAGGCTTGGGCCAAGGG...CTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGGCTGCCCTGGTGACCCTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCTCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSSLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GCTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAAGGGGCGCTGGGACCTaGCGCTTTGCTCTACGCGGG +
Preference number: 5 (lower is better)
Translates to: APAAAAASSTKILHSLPTRGAGT*RFALRG
Trigger: CCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCT...TGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR CAA 90 bp GAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCAAGGGGCGCTGGGACCTaGCGCTTTGCTCTACGCGGG +
Preference number: 5 (lower is better)
Translates to: EGFQSSSLPFLDAPAAAARGAGT*RFALRG
Trigger: CCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCT...TGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS GCA 90 bp CTCACGATCACAGGCCGGGGCTTCCTGAACCCTCGCAATGACACTTaGCCGGACCCTGCCACCGAGGATCCAAGGGGCGCTGGGACCTTG +
Preference number: 5 (lower is better)
Translates to: LTITGRGFLNPRNDT*PDPATEDPRGAGTL
Trigger: CAAGGTCCCAGCGCCCCTTGGATCCTCGGTGGCAGGGTCCGGGCAAGTGTCATTGCGAGGGTTCAGGAAGCCCCGGCCTGTGATCGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS CCA 90 bp CCGACGTCAGCGTCCAGGAACGGGTTCCTACGACTCCCGGGGGTCTaGGAGCAGGCGGGAATCCTTGGAGAACTGCAGCCCCTTCCTCGT +
Preference number: 5 (lower is better)
Translates to: PTSASRNGFLRLPGV*EQAGILGELQPLPR
Trigger: ACGAGGAAGGGGCTGCAGTTCTCCAAGGATTCCCGCCTGCTCCCAGACCCCCGGGAGTCGTAGGAACCCGTTCCTGGACGCTGACGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS-3UTR CAA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCGGGCTGTCCATGGCTTaGGGGAAACTCCAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSGLSMA*GKLQEG
Trigger: CCCCTCCTGGAGTTTCCCCAAAGCCATGGACAGCCC...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCGGGCTGTCCATGGCTTaGGGGAAACTCCAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: GRVPVQLAPVSRCSCRRRGLSMA*GKLQEG
Trigger: CCCCTCCTGGAGTTTCCCCAAAGCCATGGACAGCCC...GCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CAA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGGGCTGTCCATGGCTTaGGGGAAACTCCAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: QVAAARRAVARKGKGSSPGLSMA*GKLQEG
Trigger: CCCCTCCTGGAGTTTCCCCAAAGCCATGGACAGCCC...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCCAACATCAGGGGGCCTaGGTTCCCCCAGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: EGEGFQSSSLPFLDAPAAQHQGA*VPPGQR
Trigger: GCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTTG...GGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCCCCTGGATGTCCCCCTaGGCCCAAGCCTTGTTGGTC +
Preference number: 5 (lower is better)
Translates to: GEGFQSSSLPFLDAPAAAPWMSP*AQALLV
Trigger: GACCAACAAGGCTTGGGCCAAGGGGGACATCCAGGG...GGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp CTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCTCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LRLLPPEERWPGRGRVPVSLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...GACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCCTGGGACCTTGCGCTTaGCTCTACGCGGGTCTCAGC +
Preference number: 5 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSLGPCA*LYAGLS
Trigger: GCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCAG...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
CDS-3UTR CAA 90 bp TCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTGGGCTGTCCATGGCTTaGGGGAAACTCCAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: SQVAAARRAVARKGKGSSGLSMA*GKLQEG
Trigger: CCCCTCCTGGAGTTTCCCCAAAGCCATGGACAGCCC...ACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGCAACATCAGGGGGCCTaGGTTCCCCCAGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: VWCLISGCCRPKSGGQEGQHQGA*VPPGQR
Trigger: GCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTTG...CCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGCAACATCAGGGGGCCTaGGTTCCCCCAGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: AAAAASSTKILHSLPTDLQHQGA*VPPGQR
Trigger: GCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTTG...CAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp CCAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCAACATCAGGGGGCCTaGGTTCCCCCAGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: PGRGRVPVQLAPVSRCSCQHQGA*VPPGQR
Trigger: GCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTTG...GCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQSLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCCGCATCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: EGFQSSSLPFLDAPAAAASLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...TGCGGCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp CTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGTCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LLPPPQPHPPRFSTLCPQSLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...CTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGCGCTGGGACCTaGCGCTTTGCTCTACGCGGG +
Preference number: 5 (lower is better)
Translates to: GCLVFNLRLLPPEERWPGRGAGT*RFALRG
Trigger: CCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCT...TCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS-3UTR CAA 90 bp CCGCATACGTGCACACGCCCAGCCCGACGGCGAGGACCCCCAGCAGGAAGGCACGGGCAGGAGAATCACTaGAACCCAAGAGGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: PHTCTRPARRRGPPAGRHGQENH*NPRGRD
Trigger: ATCTCTGCCTCTTGGGTTCAAGTGATTCTCCTGCCC...GTGCCTTCCTGCTGGGGGTCCTCGCCGTCGGGCTGGGCGTGTGCACGTATGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS TCA 90 bp AACTCCAGGAGGGGTTTCCGCTCACGATCACAGGCCGGGGCTTCCTaGACCCTCGCAATGACACTTGCCCGGACCCTGCCACCGAGGATC +
Preference number: 5 (lower is better)
Translates to: NSRRGFRSRSQAGAS*TLAMTLARTLPPRI
Trigger: GATCCTCGGTGGCAGGGTCCGGGCAAGTGTCATTGCGAGGGTTCAGGAAGCCCCGGCCTGTGATCGTGAGCGGAAACCCCTCCTGGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS-3UTR CAA 90 bp CTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCAACATCAGGGGGCCTaGGTTCCCCCAGGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: LQGCLVFNLRLLPPEERWQHQGA*VPPGQR
Trigger: GCGCTGGCCTGGGGGAACCAAGGCCCCCTGATGTTG...CCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CAA 90 bp GGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCTCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GRGRVPVQLAPVSRCSCRSLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...GCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp CTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCGTGTTTAATCTCAGGTaGCTGCCGCCCGAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: LRLLPPEERWPGRGRVPVVFNLR*LPPEER
Trigger: CCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC...GACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp TCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCGTGTTTAATCTCAGGTaGCTGCCGCCCGAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: SGCCRPKSGGQEGEGFQSVFNLR*LPPEER
Trigger: CCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC...GGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp TCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTAGCAGGCGGGAATCCTaGGAGAACTGCAGCCCCTTC +
Preference number: 5 (lower is better)
Translates to: SQVAAARRAVARKGKGSSSRRES*ENCSPF
Trigger: GAAGGGGCTGCAGTTCTCCAAGGATTCCCGCCTGCT...ACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS-3UTR CAA 90 bp GGCTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTAGGGGCGCTGGGACCTaGCGCTTTGCTCTACGCGGG +
Preference number: 5 (lower is better)
Translates to: GCKGVWCLISGCCRPKSGRGAGT*RFALRG
Trigger: CCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCT...ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000544232.5
CDS GCA 90 bp TCCCCCAGGCCAGCGCTCACGGAGGGAAGAGGCGGTGACAGGAACTaGAAACCCCTCAGGGACTCGGCAAAGGCTATCTCTCTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: SPRPALTEGRGGDRN*KPLRDSAKAISLKG
Trigger: CCCCTTAAGAGAGATAGCCTTTGCCGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCCTCTTCCCTCCGTGAGCGCTGGCCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000342187.9
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000537354.5
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CAA 90 bp CAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCACTCCAGCAGAGGCTGTaGAAGCTCACGAAGACTAGG +
Preference number: 5 (lower is better)
Translates to: QVAAARRAVARKGKGSSPLQQRL*KLTKTR
Trigger: CCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGAG...TGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CAA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTTGGCCCAAGCCTTGTaGGTCTGTAGAGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQLAQAL*VCRGSG
Trigger: CCCACTGCCTCTACAGACCAACAAGGCTTGGGCCAA...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp GCTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACATTGGCCCAAGCCTTGTaGGTCTGTAGAGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: APAAAAASSTKILHSLPTLAQAL*VCRGSG
Trigger: CCCACTGCCTCTACAGACCAACAAGGCTTGGGCCAA...TGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp TCCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGCCCTGGATGTCCCCCTaGGCCCAAGCCTTGTTGGTC +
Preference number: 5 (lower is better)
Translates to: STLCPQICWAAGLRVHSEPWMSP*AQALLV
Trigger: GACCAACAAGGCTTGGGCCAAGGGGGACATCCAGGG...CTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp CAGGAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCTCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: QEGEGFQSSSLPFLDAPASLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...GGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGATCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GCLVFNLRLLPPEERWPGSLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...TCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp ATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGGTGTTTAATCTCAGGTaGCTGCCGCCCGAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: ISGCCRPKSGGQEGEGFQVFNLR*LPPEER
Trigger: CCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC...CTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GCTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGTGTTTAATCTCAGGTaGCTGCCGCCCGAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: APAAAAASSTKILHSLPTVFNLR*LPPEER
Trigger: CCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC...TGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCTGGGACCTTGCGCTTaGCTCTACGCGGGTCTCAGC +
Preference number: 5 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFLGPCA*LYAGLS
Trigger: GCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCAG...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
CDS GCA 90 bp CCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTaGTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PQPHPPRFSTLCPQI*WAAGLRVHSEGFWA
Trigger: AGCCCAGAAGCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436170.6
CDS-3UTR CAA 90 bp GCTCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACACTCCAGCAGAGGCTGTaGAAGCTCACGAAGACTAGG +
Preference number: 5 (lower is better)
Translates to: APAAAAASSTKILHSLPTLQQRL*KLTKTR
Trigger: CCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGAG...TGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CAA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGACCCTTGGCCCAAGCCTaGTTGGTCTGTAGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRPLAQA*LVCRGS
Trigger: ACTGCCTCTACAGACCAACAAGGCTTGGGCCAAGGG...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356385.8
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp CAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCATCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: QGCLVFNLRLLPPEERWPSLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...TGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp AATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTGTTTAATCTCAGGTaGCTGCCGCCCGAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: NLRLLPPEERWPGRGRVPVFNLR*LPPEER
Trigger: CCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC...TGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGTGTTTAATCTCAGGTaGCTGCCGCCCGAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: EGEGFQSSSLPFLDAPAAVFNLR*LPPEER
Trigger: CCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC...GGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp AGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCGCTTGGCCCAAGCCTTGTaGGTCTTCTGGGCTAGACAG +
Preference number: 5 (lower is better)
Translates to: RGRVPVQLAPVSRCSCRRLAQAL*VFWARQ
Trigger: CTGTCTAGCCCAGAAGACCAACAAGGCTTGGGCCAA...GCGGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS-3UTR CAA 90 bp TCCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGACCAGGAGGGGTTTCCTaGTTTCCCAGCCTGACTCTC +
Preference number: 5 (lower is better)
Translates to: SCRRRSLIHQDSPLSAHRPGGVS*FPSLTL
Trigger: GAGAGTCAGGCTGGGAAACAAGGAAACCCCTCCTGG...TCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604123.5
CDS-3UTR CAA 90 bp GAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCCTCCAGCAGAGGCTGTaGAAGCTCACGAAGACTAGG +
Preference number: 5 (lower is better)
Translates to: EGEGFQSSSLPFLDAPAALQQRL*KLTKTR
Trigger: CCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGAG...GGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CAA 90 bp TCCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGTGTTTAATCTCAGGTaGCTGCCGCCCGAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: STLCPQICWAAGLRVHSEVFNLR*LPPEER
Trigger: CCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC...CTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000535712.1
ENST00000539627.5
ENST00000546362.5
CDS-3UTR CAA 90 bp GCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGCCCTTGGCCCAAGCCTaGTTGGTCTTCTGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: AAAAASSTKILHSLPTDLPLAQA*LVFWAR
Trigger: TCTAGCCCAGAAGACCAACAAGGCTTGGGCCAAGGG...CAAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS-3UTR CAA 90 bp GTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGCTCCAGCAGAGGCTGTaGAAGCTCACGAAGACTAGG +
Preference number: 5 (lower is better)
Translates to: VWCLISGCCRPKSGGQEGLQQRL*KLTKTR
Trigger: CCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGAG...CCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CAA 90 bp TTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCTCCAGCAGAGGCTGTaGAAGCTCACGAAGACTAGG +
Preference number: 5 (lower is better)
Translates to: LISGCCRPKSGGQEGEGFLQQRL*KLTKTR
Trigger: CCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGAG...GAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CAA 90 bp CTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGGTGTTTAATCTCAGGTaGCTGCCGCCCGAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: LQGCLVFNLRLLPPEERWVFNLR*LPPEER
Trigger: CCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC...CCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000604123.5
CDS-3UTR CAA 90 bp TGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGTGTTTAATCTCAGGTaGCTGCCGCCCGAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: CRRRSLIHQDSPLSAHRFVFNLR*LPPEER
Trigger: CCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACAC...AAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000544232.5
ENST00000546050.1
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp CCTTGTTGGTCTGTAGAGGCAGTGGGCAGCAGTGACCCAGGCATCCCCTCAGTCGACTTGCCCAAAATCTaGCAGAGAGCTGGGCACCGT +
Preference number: 5 (lower is better)
Translates to: PCWSVEAVGSSDPGIPSVDLPKI*QRAGHR
Trigger: ACGGTGCCCAGCTCTCTGCAAGATTTTGGGCAAGTC...GACTGAGGGGATGCCTGGGTCACTGCTGCCCACTGCCTCTACAGACCAACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS GCA 90 bp CAGCCAAGCCGAGGTGGTCGTGGGGTAGAAATGGTGAAAGACGGCTaGCTCCATCCCAGTCCGAGTCACTGTCACTGGATGACATGTCCT +
Preference number: 5 (lower is better)
Translates to: QPSRGGRGVEMVKDG*LHPSPSHCHWMTCP
Trigger: AGGACATGTCATCCAGTGACAGTGACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCATTTCTACCCCACGACCACCTCGGCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342187.9
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000537354.5
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp GGCTGCAAGGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTCTCCAGCAGAGGCTGTaGAAGCTCACGAAGACTAGG +
Preference number: 5 (lower is better)
Translates to: GCKGVWCLISGCCRPKSGLQQRL*KLTKTR
Trigger: CCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGAG...ACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCCTTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000539627.5
ENST00000544232.5
ENST00000604123.5
CDS-3UTR CAA 90 bp TCTCCACTCTCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGTGGCAGACTCAGGATTaGAGTTCAGGTTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: SPLSAHRFAGLPASGFTVWQTQD*SSGSLG
Trigger: GCCCAGAGAACCTGAACTCAAATCCTGAGTCTGCCA...CACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGAGTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp TCTGCCCACAGATTTGCTGGGCTGCCGGCCTCAGGGTTCACAGTGAGGGCTGTATGGCAGACTCAGGATTaGAGTTCAGGTTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: SAHRFAGLPASGFTVRAVWQTQD*SSGSLG
Trigger: GCCCAGAGAACCTGAACTCAAATCCTGAGTCTGCCA...TACAGCCCTCACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp TGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATTTGACTTGCCCAAAATCTaGCAGAGAGCTGGGCACCGT +
Preference number: 5 (lower is better)
Translates to: CRRRSLIHQDSPLSAHRFDLPKI*QRAGHR
Trigger: ACGGTGCCCAGCTCTCTGCAAGATTTTGGGCAAGTC...AAATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp CTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCGGGAAGTTAAGTGACTaGCCCAAAATCTTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LRLLPPEERWPGRGRVPVGKLSD*PKILQR
Trigger: TCTCTGCAAGATTTTGGGCAAGTCACTTAACTTCCC...GACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS TCA 90 bp TTCTGGGCAGGGGTCTCACATTCTGTGCCCTCCAGCAGAGGCTGTTaGAGCTCACGAAGACTAGGGCTGTCCATGGCTTTGGGGAAACTC +
Preference number: 5 (lower is better)
Translates to: FWAGVSHSVPSSRGC*SSRRLGLSMALGKL
Trigger: GAGTTTCCCCAAAGCCATGGACAGCCCTAGTCTTCGTGAGCTTCAACAGCCTCTGCTGGAGGGCACAGAATGTGAGACCCCTGCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000342187.9
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000537354.5
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000604123.5
CDS CCA 90 bp CTAGACAGAAGGCAGCGATGCCAACGGGCCAGAAACAACACAGCATaGAGAAGACAGCCAAGCCGAGGTGGTCGTGGGGTAGAAATGGTG +
Preference number: 5 (lower is better)
Translates to: LDRRQRCQRARNNTA*RRQPSRGGRGVEMV
Trigger: CACCATTTCTACCCCACGACCACCTCGGCTTGGCTGTCTTCTCCATGCTGTGTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342187.9
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS-3UTR CAA 90 bp CAAAAGCAGATACGTAGCACCTACTATAGGTCAGGCACTGGGGATGCTGAGTGGTCTCTGCCCACAGATTaGCTGGGCTGCCGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: QKQIRSTYYRSGTGDAEWSLPTD*LGCRPQ
Trigger: CTGAGGCCGGCAGCCCAGCAAATCTGTGGGCAGAGA...CCACTCAGCATCCCCAGTGCCTGACCTATAGTAGGTGCTACGTATCTGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS TCA 90 bp TTTCTATTTTTCTCCTCCACGGTCCTGTTGCCTCGTCTCCGTCTCTaGCATCTCCCCGCCTCTCCCTCTCTGCATCACCCTCCAACCCTT +
Preference number: 5 (lower is better)
Translates to: FLFFSSTVLLPRLRL*HLPASPSLHHPPTL
Trigger: AAGGGTTGGAGGGTGATGCAGAGAGGGAGAGGCGGGGAGATGTCAGAGACGGAGACGAGGCAACAGGACCGTGGAGGAGAAAAATAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS CCA 90 bp TTTTATGCCCAGTCCCCTCCAAGTCCCACACACAGACTGACCTTCTaGGCTAGACAGAAGGCAGCGATGCCAACGGGCCAGAAACAACAC +
Preference number: 5 (lower is better)
Translates to: FYAQSPPSPTHRLTF*ARQKAAMPTGQKQH
Trigger: GTGTTGTTTCTGGCCCGTTGGCATCGCTGCCTTCTGTCTAGCCCAGAAGGTCAGTCTGTGTGTGGGACTTGGAGGGGACTGGGCATAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp GAAGGGGAAGGGTTCCAGTCCAGCTCGCTCCCGTTTCTAGATGCTCCTGCCGCCTGGGTCTCCTGGTTTTaGTCTCTCCGACTATTTTCT +
Preference number: 5 (lower is better)
Translates to: EGEGFQSSSLPFLDAPAAWVSWF*SLRLFS
Trigger: AGAAAATAGTCGGAGAGACAAAAACCAGGAGACCCA...GGCGGCAGGAGCATCTAGAAACGGGAGCGAGCTGGACTGGAACCCTTCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS-3UTR CAA 90 bp GGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAAGGGGAAGGGTTCCAGTCCAGCACTATTCTAACTCATTaGATTCTCACATTGACCCAG +
Preference number: 5 (lower is better)
Translates to: GCCRPKSGGQEGEGFQSSTILTH*ILTLTQ
Trigger: CTGGGTCAATGTGAGAATCAAATGAGTTAGAATAGT...GCTGGACTGGAACCCTTCCCCTTCCTGGCCACCGCTCTTCGGGCGGCAGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp GGGTGTCTGGTGTTTAATCTCAGGTTGCTGCCGCCCGAAGAGCGGTGGCCAGGAGGGAAGTTAAGTGACTaGCCCAAAATCTTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: GCLVFNLRLLPPEERWPGGKLSD*PKILQR
Trigger: TCTCTGCAAGATTTTGGGCAAGTCACTTAACTTCCC...TCCTGGCCACCGCTCTTCGGGCGGCAGCAACCTGAGATTAAACACCAGACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS GCA 90 bp CCCAACAAATGCACATGTGTCTCGTCTCGCACGTGTCTCCCCATCTaGCTCTTTCTTTTCGTCTCCGTTAGTCTTTCTGTCCACGCATGG +
Preference number: 5 (lower is better)
Translates to: PNKCTCVSSRTCLPI*LFLFVSVSLSVHAW
Trigger: CCATGCGTGGACAGAAAGACTAACGGAGACGAAAAGAAAGAGGCAGATGGGGAGACACGTGCGAGACGAGACACATGTGCATTTGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS-3UTR CAA 90 bp CCTGCCGCCGCCGCAGCCTCATCCACCAAGATTCTCCACTCTCTGCCCACAGATCAGGTATATGGCTCTTaGTTTTTGTGGTGCATTTTT +
Preference number: 5 (lower is better)
Translates to: PAAAAASSTKILHSLPTDQVYGS*FLWCIF
Trigger: AAAAATGCACCACAAAAACAAAGAGCCATATACCTG...ATCTGTGGGCAGAGAGTGGAGAATCTTGGTGGATGAGGCTGCGGCGGCGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp CCTTGTTGGTCTGTAGAGGCAGTGGGCAGCAGTGACCCAGGCATCCCCTCAGTCCAGGTATATGGCTCTTaGTTTTTGTGGTGCATTTTT +
Preference number: 5 (lower is better)
Translates to: PCWSVEAVGSSDPGIPSVQVYGS*FLWCIF
Trigger: AAAAATGCACCACAAAAACAAAGAGCCATATACCTG...GACTGAGGGGATGCCTGGGTCACTGCTGCCCACTGCCTCTACAGACCAACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS-3UTR CAA 90 bp ATGTATTCCAAAAGCAGATACGTAGCACCTACTATAGGTCAGGCACTGGGGATGACTATTCTAACTCATTaGATTCTCACATTGACCCAG +
Preference number: 5 (lower is better)
Translates to: MYSKSRYVAPTIGQALGMTILTH*ILTLTQ
Trigger: CTGGGTCAATGTGAGAATCAAATGAGTTAGAATAGT...CATCCCCAGTGCCTGACCTATAGTAGGTGCTACGTATCTGCTTTTGGAATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539627.5
ENST00000542945.5
CDS CAA 90 bp CGGACCCTGCCACCGAGGATCCAAGGGGCGCTGGGACCTTGCGCTTaGCTCTACGCGGGTCTCAGCGCCCCGGGCCCGCTGCGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: RTLPPRIQGALGPCA*LYAGLSAPGPLRAG
Trigger: CCCCGCGCGCAGCGGGCCCGGGGCGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCCTCGGTGGCAGGGTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS CAA 90 bp ACTTGCCCGGACCCTGCCACCGAGGATCCAAGGGGCGCTGGGACCTaGCGCTTTGCTCTACGCGGGTCTCAGCGCCCCGGGCCCGCTGCG +
Preference number: 6 (lower is better)
Translates to: TCPDPATEDPRGAGT*RFALRGSQRPGPAA
Trigger: CGCAGCGGGCCCGGGGCGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCCTCGGTGGCAGGGTCCGGGCAAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS GCA 72 bp CACCGAGGATCCAAGGGGCGCTGGGACCTTGCGCTTTaGTCTACGCGGGTCTCAGCGCCCCGGGCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: HRGSKGRWDLAL*STRVSAPRARC
Trigger: GCAGCGGGCCCGGGGCGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCCTCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS CAA 72 bp CCACCGAGGATCCAAGGGGCGCTGGGACCTTGCGCTTaGCTCTACGCGGGTCTCAGCGCCCCGGGCCCGCTG +
Preference number: 6 (lower is better)
Translates to: PPRIQGALGPCA*LYAGLSAPGPL
Trigger: CAGCGGGCCCGGGGCGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCCTCGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS GCA 72 bp ACCCTGCCACCGAGGATCCAAGGGGCGCTGGGACCTTaGGCTTTGCTCTACGCGGGTCTCAGCGCCCCGGGC +
Preference number: 6 (lower is better)
Translates to: TLPPRIQGALGP*ALLYAGLSAPG
Trigger: GCCCGGGGCGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCCTCGGTGGCAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS CAA 72 bp GACCCTGCCACCGAGGATCCAAGGGGCGCTGGGACCTaGCGCTTTGCTCTACGCGGGTCTCAGCGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: DPATEDPRGAGT*RFALRGSQRPG
Trigger: CCCGGGGCGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCCTCGGTGGCAGGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS TCA 72 bp GGCTCTGTCCCTCCGCGGCGTCCGGCGAGGGATCCCTaGAAGCCGACGTCAGCGTCCAGGAACGGGTTCCTA +
Preference number: 6 (lower is better)
Translates to: GSVPPRRPARDP*KPTSASRNGFL
Trigger: TAGGAACCCGTTCCTGGACGCTGACGTCGGCTTTCAGGGATCCCTCGCCGGACGCCGCGGAGGGACAGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392002.7
ENST00000436170.6
CDS CCA 72 bp TTGCCCGGACCCTGCCACCGAGGATCCAAGGGGCGCTaGGACCTTGCGCTTTGCTCTACGCGGGTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: LPGPCHRGSKGR*DLALCSTRVSA
Trigger: CGCTGAGACCCGCGTAGAGCAAAGCGCAAGGTCCCAGCGCCCCTTGGATCCTCGGTGGCAGGGTCCGGGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
CDS GCA 72 bp CGGGGGTCTGGGAGCAGGCGGGAATCCTTGGAGAACTaGAGCCCCTTCCTCGTGAGCCCAGGCCCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: RGSGSRRESLEN*SPFLVSPGPSS
Trigger: AGAGCTTGGGCCTGGGCTCACGAGGAAGGGGCTGCAGTTCTCCAAGGATTCCCGCCTGCTCCCAGACCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS CCA 72 bp GCGTCCAGGAACGGGTTCCTACGACTCCCGGGGGTCTaGGAGCAGGCGGGAATCCTTGGAGAACTGCAGCCC +
Preference number: 6 (lower is better)
Translates to: ASRNGFLRLPGV*EQAGILGELQP
Trigger: GGGCTGCAGTTCTCCAAGGATTCCCGCCTGCTCCCAGACCCCCGGGAGTCGTAGGAACCCGTTCCTGGACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS CAA 72 bp TACGACTCCCGGGGGTCTGGGAGCAGGCGGGAATCCTaGGAGAACTGCAGCCCCTTCCTCGTGAGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: YDSRGSGSRRES*ENCSPFLVSPG
Trigger: GCCTGGGCTCACGAGGAAGGGGCTGCAGTTCTCCAAGGATTCCCGCCTGCTCCCAGACCCCCGGGAGTCGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS CAA 90 bp ACGGGTTCCTACGACTCCCGGGGGTCTGGGAGCAGGCGGGAATCCTaGGAGAACTGCAGCCCCTTCCTCGTGAGCCCAGGCCCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: TGSYDSRGSGSRRES*ENCSPFLVSPGPSS
Trigger: AGAGCTTGGGCCTGGGCTCACGAGGAAGGGGCTGCAGTTCTCCAAGGATTCCCGCCTGCTCCCAGACCCCCGGGAGTCGTAGGAACCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392002.7
CDS TCA 72 bp AGGGGTTTCCGCTCACGATCACAGGCCGGGGCTTCCTaGACCCTCGCAATGACACTTGCCCGGACCCTGCCA +
Preference number: 6 (lower is better)
Translates to: RGFRSRSQAGAS*TLAMTLARTLP
Trigger: TGGCAGGGTCCGGGCAAGTGTCATTGCGAGGGTTCAGGAAGCCCCGGCCTGTGATCGTGAGCGGAAACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392002.7
ENST00000436170.6
ENST00000447302.6
ENST00000542945.5
ENST00000544232.5
CDS GCA 72 bp CGAGGTGGTCGTGGGGTAGAAATGGTGAAAGACGGCTaGCTCCATCCCAGTCCGAGTCACTGTCACTGGATG +
Preference number: 6 (lower is better)
Translates to: RGGRGVEMVKDG*LHPSPSHCHWM
Trigger: CATCCAGTGACAGTGACTCGGACTGGGATGGAGGCAGCCGTCTTTCACCATTTCTACCCCACGACCACCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000342187.9
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000537354.5
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS CCA 72 bp GACGGCTGCCTCCATCCCAGTCCGAGTCACTGTCACTaGATGACATGTCCTCAACATCAGGGGGCCTTGGTT +
Preference number: 6 (lower is better)
Translates to: DGCLHPSPSHCH*MTCPQHQGALV
Trigger: AACCAAGGCCCCCTGATGTTGAGGACATGTCATCCAGTGACAGTGACTCGGACTGGGATGGAGGCAGCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000342187.9
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000537354.5
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS CCA 72 bp AAACAACACAGCATGGAGAAGACAGCCAAGCCGAGGTaGTCGTGGGGTAGAAATGGTGAAAGACGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: KQHSMEKTAKPR*SWGRNGERRLP
Trigger: AGGCAGCCGTCTTTCACCATTTCTACCCCACGACCACCTCGGCTTGGCTGTCTTCTCCATGCTGTGTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000342187.9
ENST00000356385.8
ENST00000392002.7
ENST00000413014.6
ENST00000436170.6
ENST00000447302.6
ENST00000535712.1
ENST00000537354.5
ENST00000539627.5
ENST00000542945.5
ENST00000544232.5
ENST00000546362.5
ENST00000604123.5
CDS TCA 72 bp GGGAAACTCCAGGAGGGGTTTCACATTTATCCCAATTaGCTCCGTGCACAACCCTACTCCCCACTGCATCAC +
Preference number: 6 (lower is better)
Translates to: GKLQEGFHIYPN*LRAQPYSPLHH
Trigger: GTGATGCAGTGGGGAGTAGGGTTGTGCACGGAGTCAATTGGGATAAATGTGAAACCCCTCCTGGAGTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342187.9
CDS CCA 72 bp GTCTCCGTTAGTCTTTCTGTCCACGCATGGGTCTCCTaGTTTTTGTCTCTCCGACTATTTTCTCTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: VSVSLSVHAWVS*FLSLRLFSLPF
Trigger: GAAAGGGAGAGAAAATAGTCGGAGAGACAAAAACCAGGAGACCCATGCGTGGACAGAAAGACTAACGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539627.5
CDS CAA 72 bp GTTAGTCTTTCTGTCCACGCATGGGTCTCCTGGTTTTaGTCTCTCCGACTATTTTCTCTCCCTTTCTATTTT +
Preference number: 6 (lower is better)
Translates to: VSLSVHAWVSWF*SLRLFSLPFYF
Trigger: AAAATAGAAAGGGAGAGAAAATAGTCGGAGAGACAAAAACCAGGAGACCCATGCGTGGACAGAAAGACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539627.5