RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM9 (Homo sapiens)

Ensembl gene IDs: ENSG00000116857

Ensembl transcript IDs: ENST00000367330.6, ENST00000367332.5, ENST00000367333.6, ENST00000367334.9, ENST00000414605.2, ENST00000435310.5, ENST00000455367.5, ENST00000472411.1, ENST00000485839.6, ENST00000495205.1, ENST00000497582.5

Found 422 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTGCAGGTGAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATaGCCCAGTGCGAGAAGTGCACAGGGGACAGCGAACACCAGCTTC +
Preference number: 1 (lower is better)
Translates to: SAGEGTGSRVCMGTP*PSARSAQGTANTSF
Trigger: GAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR GCA 90 bp TCGAAGACTGTCTTCCGCTGCTCCTGCACCTGCAGCTTCCACCGCTaGTGGGCACCTTCCACACGCTCCAGGACTGTGTTTGCTCGGGGT +
Preference number: 1 (lower is better)
Translates to: SKTVFRCSCTCSFHR*WAPSTRSRTVFARG
Trigger: ACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCTGCAGGTGCAGGAGCAGCGGAAGACAGTCTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497582.5
3UTR CCA 90 bp CGAGGGAAGGGAGAAGTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTaGCAGCCATGGTGTTGGGGCCTTGACCCAACCACACCAGCCCAT +
Preference number: 1 (lower is better)
Translates to: RGKGEVAPCFVQPGS*QPWCWGLDPTTPAH
Trigger: ATGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCCCTTCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR TCA 90 bp AAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTaGGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCTTCCC +
Preference number: 1 (lower is better)
Translates to: KAARVEPGETDRIHS*GRLECLHSLLACLP
Trigger: GGGAAGGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR GCA 90 bp CGGCAGCAGAGTATGCATGGGCACTCCATGCCCCAGTGCGAGAAGTaGACAGGGGACAGCGAACACCAGCTTCCAGTGCACCCTGAAGAC +
Preference number: 1 (lower is better)
Translates to: RQQSMHGHSMPQCEK*TGDSEHQLPVHPED
Trigger: GTCTTCAGGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR GCA 90 bp TTCCACACGCTCCAGGACTGTGTTTGCTCGGGGTCCCCCGAGGGATaGAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCTCCTCCTC +
Preference number: 1 (lower is better)
Translates to: FHTLQDCVCSGSPEG*SSCCHRASILILLL
Trigger: GAGGAGGAGAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497582.5
3UTR GCA 90 bp AGCATCTTGTGCCGATCGAAGACTGTCTTCCGCTGCTCCTGCACCTaGAGCTTCCACCGCTGCTGGGCACCTTCCACACGCTCCAGGACT +
Preference number: 1 (lower is better)
Translates to: SILCRSKTVFRCSCT*SFHRCWAPSTRSRT
Trigger: AGTCCTGGAGCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCTGCAGGTGCAGGAGCAGCGGAAGACAGTCTTCGATCGGCACAAGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
3UTR GCA 90 bp GGGCTGAGGCGCTGGGGCTGGGAGGGAGGTGGTGATAAGAACCACTaGAGAAAGGAACACATGCTGAATGCTGGGCCATGCTTTCCTCCC +
Preference number: 1 (lower is better)
Translates to: GLRRWGWEGGGDKNH*RKEHMLNAGPCFPP
Trigger: GGGAGGAAAGCATGGCCCAGCATTCAGCATGTGTTCCTTTCTGCAGTGGTTCTTATCACCACCTCCCTCCCAGCCCCAGCGCCTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR CCA 90 bp TACAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTaGTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCG +
Preference number: 1 (lower is better)
Translates to: YNEVQGQEATQVQGL*CSDPRSASSLMFQP
Trigger: CGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR CCA 90 bp CCAGCTTTATCTTCCAAGGGTAACAACATTCCCAAGACTCAGAGCTaGAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCAC +
Preference number: 1 (lower is better)
Translates to: PALSSKGNNIPKTQS*KAARVEPGETDRIH
Trigger: GTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTCCAGCTCTGAGTCTTGGGAATGTTGTTACCCTTGGAAGATAAAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp GGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTGTCCAGCCTGGAAGCTaGCAGCCATGGTGTTGGGGC +
Preference number: 2 (lower is better)
Translates to: GGKSGARRDRSHPLLRPPVQPGS*QPWCWG
Trigger: GCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGAC...AGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp GCCCCAGTGCGAGAAGTGCACAGGGGACAGCGAACACCAGCTTCCAGTGCACCCGATCGCATCCACTCCTaGGGCCGCCTCGAATGTCTC +
Preference number: 2 (lower is better)
Translates to: APVREVHRGQRTPASSAPDRIHS*GRLECL
Trigger: GAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATC...GGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp GGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTGGAAGCTGGCAGCCATaGTGTTGGGGCCTTGACCCA +
Preference number: 2 (lower is better)
Translates to: GGKSGARRDRSHPLLRPPGSWQP*CWGLDP
Trigger: TGGGTCAAGGCCCCAACACCATGGCTGCCAGCTTCC...AGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGATGGTGTTGGGGCCTTaGCCCAACCACACCAGCCCA +
Preference number: 2 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPMVLGP*PNHTSP
Trigger: TGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCAT...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp GCCCCAGTGCGAGAAGTGCACAGGGGACAGCGAACACCAGCTTCCAGTGCACCCGGAGAAGTAGCCCCCTaGTTTGTCCAGCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: APVREVHRGQRTPASSAPGEVAP*FVQPGS
Trigger: GCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCC...GGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp GTGCAGGTGAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATGCCCCAGTGGGAGAAGTAGCCCCCTaGTTTGTCCAGCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: VQVRGPAAEYAWALHAPVGEVAP*FVQPGS
Trigger: GCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCC...CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGATGGTGTTGGGGCCTTaGCCCAACCACACCAGCCCA +
Preference number: 2 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLMVLGP*PNHTSP
Trigger: TGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCAT...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGGGGGAGAGGAGGGACTaGCCAGACCCCTCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQGERRD*PDPSSA
Trigger: TGCACTTGAGGGGTCTGGGCAGTCCCTCCTCTCCCC...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCCTGCTTTGTCCAGCCTaGAAGCTGGCAGCCATGGTG +
Preference number: 2 (lower is better)
Translates to: IASTPEAASNVSIPFWPALLCPA*KLAAMV
Trigger: CACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAG...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACCTGAGGCGCTGGGGCTaGGAGGGAGGTGGTGATAAG +
Preference number: 2 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHLRRWG*EGGGDK
Trigger: CTTATCACCACCTCCCTCCCAGCCCCAGCGCCTCAG...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTATGGTGTTGGGGCCTTaGCCCAACCACACCAGCCCA +
Preference number: 2 (lower is better)
Translates to: VFRSTLSLESHVPTDRLAMVLGP*PNHTSP
Trigger: TGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCAT...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAACCGGCAGCAGAGTATaGATGGGCACTCCATGCCCC +
Preference number: 2 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSTGSRV*MGTPCP
Trigger: GGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGT...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp AGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTGGAAGCTGGCAGCCATaGTGTTGGGGCCTTGACCCA +
Preference number: 2 (lower is better)
Translates to: RRDRSHPLLRPPRMSPFPGSWQP*CWGLDP
Trigger: TGGGTCAAGGCCCCAACACCATGGCTGCCAGCTTCC...AGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp GCCCCAGTGCGAGAAGTGCACAGGGGACAGCGAACACCAGCTTCCAGTGCACCCCAGACACTGAGTTCCTaGAGACCCAGCTTTATCTTC +
Preference number: 2 (lower is better)
Translates to: APVREVHRGQRTPASSAPQTLSS*RPSFIF
Trigger: GAAGATAAAGCTGGGTCTTCAGGAACTCAGTGTCTG...GGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp CCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGCCGATCGAAGACTGTCTTTGCAGCTTCCACCGCTaGTGGGCACCTTCCACACGC +
Preference number: 2 (lower is better)
Translates to: PTTPAHLAEHLVPIEDCLCSFHR*WAPSTR
Trigger: GCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCTGCA...AAGACAGTCTTCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
3UTR-3UTR CCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGGCAGCCATGGTGTTaGGGCCTTGACCCAACCACA +
Preference number: 2 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQWQPWC*GLDPTT
Trigger: TGTGGTTGGGTCAAGGCCCCAACACCATGGCTGCCA...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGAGTCCAGCCTGGAAGCTaGCAGCCATGGTGTTGGGGC +
Preference number: 2 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRVQPGS*QPWCWG
Trigger: GCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGAC...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCACTGCTTTGTCCAGCCTaGAAGCTGGCAGCCATGGTG +
Preference number: 2 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSLLCPA*KLAAMV
Trigger: CACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAG...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGCAGCAGAGTATGCATaGGCACTCCATGCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSAAEYA*ALHAPV
Trigger: CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGC...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp TGCCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGATGGTGTTGGGGCCTTaGCCCAACCACACCAGCCCA +
Preference number: 2 (lower is better)
Translates to: CLPPPFNPKDPRRQQRSEMVLGP*PNHTSP
Trigger: TGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCAT...CTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGAGACCGTCTGGCTCAGTaGCTGTGGACACTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRDRLAQ*LWTLGR
Trigger: TCTCCCCAGTGTCCACAGTCACTGAGCCAGACGGTC...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp ATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAAGCCCCTCAAGTGCAGGTaGGGGGACCGGCAGCAGAGT +
Preference number: 2 (lower is better)
Translates to: IFSPCTGTTKFRDKRQPKPLKCR*GDRQQS
Trigger: ACTCTGCTGCCGGTCCCCTCACCTGCACTTGAGGGG...CTTGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTACACATGCTGAATGCTaGGCCATGCTTTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: VFRSTLSLESHVPTDRLATHAEC*AMLSSQ
Trigger: CTGGGAGGAAAGCATGGCCCAGCATTCAGCATGTGT...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp ATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAAGACCCTGAAGACCCAGTaGGCTCAGGGGGCCCAGCTC +
Preference number: 2 (lower is better)
Translates to: IFSPCTGTTKFRDKRQPKTLKTQ*AQGAQL
Trigger: GAGCTGGGCCCCCTGAGCCCACTGGGTCTTCAGGGT...CTTGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGAAAGGAACACATGCTaGATGCTGGGCCATGCTTTC +
Preference number: 2 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSERNTC*MLGHAF
Trigger: GAAAGCATGGCCCAGCATTCAGCATGTGTTCCTTTC...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTGAAAGGAACACATGCTaGATGCTGGGCCATGCTTTC +
Preference number: 2 (lower is better)
Translates to: VFRSTLSLESHVPTDRLAERNTC*MLGHAF
Trigger: GAAAGCATGGCCCAGCATTCAGCATGTGTTCCTTTC...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp ATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAAGCTGAGGCGCTGGGGCTaGGAGGGAGGTGGTGATAAG +
Preference number: 2 (lower is better)
Translates to: IFSPCTGTTKFRDKRQPKLRRWG*EGGGDK
Trigger: CTTATCACCACCTCCCTCCCAGCCCCAGCGCCTCAG...CTTGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp GGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCTGAAGACCCAGTaGGCTCAGGGGGCCCAGCTC +
Preference number: 2 (lower is better)
Translates to: GQNFLSMHWYNEVQGQEATLKTQ*AQGAQL
Trigger: GAGCTGGGCCCCCTGAGCCCACTGGGTCTTCAGGGT...TGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCACAGACACTGAGTTCCTaGAGACCCAGCTTTATCTTC +
Preference number: 2 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSQTLSS*RPSFIF
Trigger: GAAGATAAAGCTGGGTCTTCAGGAACTCAGTGTCTG...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp ATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAAGCCCCAGTGCGAGAAGTaGACAGGGGACAGCGAACAC +
Preference number: 2 (lower is better)
Translates to: IFSPCTGTTKFRDKRQPKPQCEK*TGDSEH
Trigger: GTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGG...CTTGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp GGATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCTCCTCCTCATTGTGCAGTTGCTCAGTATATaGATCCGGCTTTCGGATCAG +
Preference number: 2 (lower is better)
Translates to: GCSSCCHRASILILLLIVQLLSI*IRLSDQ
Trigger: CTGATCCGAAAGCCGGATGCATATACTGAGCAACTG...CACAATGAGGAGGAGAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
3UTR-3UTR CCA 90 bp AAGACCCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAGTCCAGCCTGGAAGCTaGCAGCCATGGTGTTGGGGC +
Preference number: 2 (lower is better)
Translates to: KTQEDNRDQRPHPSSLIKVQPGS*QPWCWG
Trigger: GCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGAC...TTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp GACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCCAGTGCGAGAAGTaGACAGGGGACAGCGAACAC +
Preference number: 2 (lower is better)
Translates to: DKIFSPCTGTTKFRDKRQPQCEK*TGDSEH
Trigger: GTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGG...TTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp GGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCATGGCAGCCATGGTGTTaGGGCCTTGACCCAACCACA +
Preference number: 2 (lower is better)
Translates to: GQNFLSMHWYNEVQGQEAWQPWC*GLDPTT
Trigger: TGTGGTTGGGTCAAGGCCCCAACACCATGGCTGCCA...TGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGTCCAGCCTGGAAGCTaGCAGCCATGGTGTTGGGGC +
Preference number: 2 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQVQPGS*QPWCWG
Trigger: GCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGAC...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp AAGACCCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAGGAGAAGTAGCCCCCTaGTTTGTCCAGCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: KTQEDNRDQRPHPSSLIKGEVAP*FVQPGS
Trigger: GCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCC...TTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGGGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCGGAGAAGTAGCCCCCTaGTTTGTCCAGCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIAGEVAP*FVQPGS
Trigger: GCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCC...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGGAAGCTGGCAGCCATaGTGTTGGGGCCTTGACCCA +
Preference number: 2 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQGSWQP*CWGLDP
Trigger: TGGGTCAAGGCCCCAACACCATGGCTGCCAGCTTCC...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp ATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAAGACACATGCTGAATGCTaGGCCATGCTTTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: IFSPCTGTTKFRDKRQPKTHAEC*AMLSSQ
Trigger: CTGGGAGGAAAGCATGGCCCAGCATTCAGCATGTGT...CTTGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAAGTGACTGTGGACACTaGGGAGAGGAGGGACTGCCC +
Preference number: 2 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQSDCGH*GEEGLP
Trigger: GGGCAGTCCCTCCTCTCCCCAGTGTCCACAGTCACT...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR TCA 90 bp ATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAAGGAAAGGAACACATGCTaGATGCTGGGCCATGCTTTC +
Preference number: 2 (lower is better)
Translates to: IFSPCTGTTKFRDKRQPKERNTC*MLGHAF
Trigger: GAAAGCATGGCCCAGCATTCAGCATGTGTTCCTTTC...CTTGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CCA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAACACATGCTGAATGCTaGGCCATGCTTTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPTHAEC*AMLSSQ
Trigger: CTGGGAGGAAAGCATGGCCCAGCATTCAGCATGTGT...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp GACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAAGGAACACATGCTGAATaGTGGGCCATGCTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: DKIFSPCTGTTKFRDKRQGTHAE*WAMLSS
Trigger: GGAGGAAAGCATGGCCCAGCATTCAGCATGTGTTCC...TTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR GCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAAACACCAGCTTCCAGTaGACCCTGAAGACCCAGTGG +
Preference number: 2 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQNTSFQ*TLKTQW
Trigger: CCACTGGGTCTTCAGGGTGCACTGGAAGCTGGTGTT...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR TCA 72 bp GGAGAGGAGGGACTGCCCAGACCCCTCAAGTGCAGGTaGGGGGACCGGCAGCAGAGTATGCATGGGCACTCC +
Preference number: 3 (lower is better)
Translates to: GEEGLPRPLKCR*GDRQQSMHGHS
Trigger: GGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCACTTGAGGGGTCTGGGCAGTCCCTCCTCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR GCA 72 bp AGAAGTGCACAGGGGACAGCGAACACCAGCTTCCAGTaGACCCTGAAGACCCAGTGGGCTCAGGGGGCCCAG +
Preference number: 3 (lower is better)
Translates to: RSAQGTANTSFQ*TLKTQWAQGAQ
Trigger: CTGGGCCCCCTGAGCCCACTGGGTCTTCAGGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR GCA 72 bp GAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATaGCCCAGTGCGAGAAGTGCACAGGGGACAGCGAAC +
Preference number: 3 (lower is better)
Translates to: EGTGSRVCMGTP*PSARSAQGTAN
Trigger: GTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR TCA 72 bp CTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTaGCTGTGGACACTGGGGAGAGGAGGGACTGCCCAG +
Preference number: 3 (lower is better)
Translates to: LESHVPTDRLAQ*LWTLGRGGTAQ
Trigger: CTGGGCAGTCCCTCCTCTCCCCAGTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR GCA 72 bp CTGAGCATCTTGTGCCGATCGAAGACTGTCTTCCGCTaGTCCTGCACCTGCAGCTTCCACCGCTGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: LSILCRSKTVFR*SCTCSFHRCWA
Trigger: TGCCCAGCAGCGGTGGAAGCTGCAGGTGCAGGAGCAGCGGAAGACAGTCTTCGATCGGCACAAGATGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
3UTR-3UTR CAA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGCATGGTGTTGGGGCCTaGACCCAACCACACCAGCCC +
Preference number: 3 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQHGVGA*TQPHQP
Trigger: GGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCATG...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR TCA 72 bp AGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTaGGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCC +
Preference number: 3 (lower is better)
Translates to: RVEPGETDRIHS*GRLECLHSLLA
Trigger: GGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR CCA 72 bp GTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTaGTGTTCAGATCCACGCTCAGCCTCGAGTCTCATG +
Preference number: 3 (lower is better)
Translates to: VQGQEATQVQGL*CSDPRSASSLM
Trigger: CATGAGACTCGAGGCTGAGCGTGGATCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CAA 90 bp ATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAAGCATGGTGTTGGGGCCTaGACCCAACCACACCAGCCC +
Preference number: 3 (lower is better)
Translates to: IFSPCTGTTKFRDKRQPKHGVGA*TQPHQP
Trigger: GGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCATG...CTTGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR-3UTR CAA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCACATGGTGTTGGGGCCTaGACCCAACCACACCAGCCC +
Preference number: 3 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPHGVGA*TQPHQP
Trigger: GGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCATG...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR CCA 72 bp TCTTCCAAGGGTAACAACATTCCCAAGACTCAGAGCTaGAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGAT +
Preference number: 3 (lower is better)
Translates to: SSKGNNIPKTQS*KAARVEPGETD
Trigger: ATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTCCAGCTCTGAGTCTTGGGAATGTTGTTACCCTTGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR GCA 72 bp GCCATAGAGCGAGCATCCTCATTCTCCTCCTCATTGTaGAGTTGCTCAGTATATGCATCCGGCTTTCGGATC +
Preference number: 3 (lower is better)
Translates to: AIERASSFSSSL*SCSVYASGFRI
Trigger: GATCCGAAAGCCGGATGCATATACTGAGCAACTGCACAATGAGGAGGAGAATGAGGATGCTCGCTCTATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR TCA 90 bp GGTCCCCCGAGGGATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCTCCCCGCCAGCCACCTGGTaGGCCCGGCAGAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GPPRDAAAAAIERASSFSPPATW*ARQRGP
Trigger: AGGACCCCTCTGCCGGGCTCACCAGGTGGCTGGCGG...GGAGAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTCGGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp CCCCCGAGGGATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCTCCTCCCGAGTCTGGGACCCCTaGTCCGACGGCGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PPRDAAAAAIERASSFSSRVWDP*SDGEGR
Trigger: CCGGCCTTCGCCGTCGGAGCAGGGGTCCCAGACTCG...GGAGGAGAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497582.5
3UTR CAA 72 bp GCTGCTGGGCACCTTCCACACGCTCCAGGACTGTGTTaGCTCGGGGTCCCCCGAGGGATGCAGCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AAGHLPHAPGLC*LGVPRGMQQLL
Trigger: CAGCAGCTGCTGCATCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAAGGTGCCCAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR TCA 90 bp GCTGGGCACCTTCCACACGCTCCAGGACTGTGTTTGCTCGGGGTCCCCCGAGGGATGGTGTTGGGGCCTTaGCCCAACCACACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AGHLPHAPGLCLLGVPRGMVLGP*PNHTSP
Trigger: TGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCAT...CCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAAGGTGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp GGCACCTTCCACACGCTCCAGGACTGTGTTTGCTCGGGGTCCCCCGAGGGATGCGTCTTCCGCTGCTCCTaGACCTGCAGCTTCCACCGC +
Preference number: 4 (lower is better)
Translates to: GTFHTLQDCVCSGSPEGCVFRCS*TCSFHR
Trigger: GCGGTGGAAGCTGCAGGTGCAGGAGCAGCGGAAGAC...GCATCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAAGGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp GGGCACCTTCCACACGCTCCAGGACTGTGTTTGCTCGGGGTCCCCCGAGGGATGCTGGTCGCCAAACCCTaGTTCCCTCCCGCCCAACTC +
Preference number: 4 (lower is better)
Translates to: GHLPHAPGLCLLGVPRGMLVAKP*FPPAQL
Trigger: GAGTTGGGCGGGAGGGAAGCAGGGTTTGGCGACCAG...CATCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAAGGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp GCCCCAGTGCGAGAAGTGCACAGGGGACAGCGAACACCAGCTTCCAGTGCACCCACCCTGAAGACCCAGTaGGCTCAGGGGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: APVREVHRGQRTPASSAPTLKTQ*AQGAQL
Trigger: GAGCTGGGCCCCCTGAGCCCACTGGGTCTTCAGGGT...GGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CGGGGTCCCCCGAGGGATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCCGGAGAAGGGGAAGGTaGCCACACCGCAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RGPPRDAAAAAIERASSFRRRGR*PHRSQH
Trigger: GTGCTGGCTGCGGTGTGGCCACCTTCCCCTTCTCCG...GAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTCGGGGGACCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR TCA 90 bp GCCCCAGTGCGAGAAGTGCACAGGGGACAGCGAACACCAGCTTCCAGTGCACCCGCTTCCAGTGCACCCTaGAGACCCAGTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: APVREVHRGQRTPASSAPASSAP*RPSGLR
Trigger: CCTGAGCCCACTGGGTCTTCAGGGTGCACTGGAAGC...GGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCCGCCAGCCACCTGGTaGGCCCGGCAGAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLAPPATW*ARQRGP
Trigger: AGGACCCCTCTGCCGGGCTCACCAGGTGGCTGGCGG...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR GCA 90 bp GCTGGGCACCTTCCACACGCTCCAGGACTGTGTTTGCTCGGGGTCCCCCGAGGGGAGGGATGCAGCAGCTaGTGCCATAGAGCGAGCATC +
Preference number: 4 (lower is better)
Translates to: AGHLPHAPGLCLLGVPRGEGCSS*CHRASI
Trigger: GATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTC...CCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAAGGTGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp GGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTGGGTCCCCCGAGGGATaGAGCAGCTGCTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: GGKSGARRDRSHPLLRPPGSPEG*SSCCHR
Trigger: TCTATGGCAGCAGCTGCTGCATCCCTCGGGGGACCC...AGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CGGGGTCCCCCGAGGGATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCGGGTCCCCCGAGGGATaGAGCAGCTGCTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: RGPPRDAAAAAIERASSFGSPEG*SSCCHR
Trigger: TCTATGGCAGCAGCTGCTGCATCCCTCGGGGGACCC...GAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTCGGGGGACCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp GGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTCTCCAGGACTGTGTTTaGTCGGGGTCCCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: GGKSGARRDRSHPLLRPPLQDCV*SGSPEG
Trigger: TCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAG...AGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTGGGGCCTTCGCTGCTCCTGCACCTaGAGCTTCCACCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VAPCFVQPGSWQPWCWGLRCSCT*SFHRCW
Trigger: CCAGCAGCGGTGGAAGCTGCAGGTGCAGGAGCAGCG...AAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGCGCCATCTCCGCCTCTaGCCGCCCCGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQRHLRL*PPRSSS
Trigger: GGAGGAGCTGCGGGGCGGGCAGAGGCGGAGATGGCG...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR TCA 90 bp GGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTATGGTGTTGGGGCCTTaGCCCAACCACACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGKSGARRDRSHPLLRPPMVLGP*PNHTSP
Trigger: TGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCAT...AGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GTGCAGGTGAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATGCCCCAGTGGACCGTCTGGCTCAGTaGCTGTGGACACTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VQVRGPAAEYAWALHAPVDRLAQ*LWTLGR
Trigger: TCTCCCCAGTGTCCACAGTCACTGAGCCAGACGGTC...CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GCCCCAGTGCGAGAAGTGCACAGGGGACAGCGAACACCAGCTTCCAGTGCACCCACCGGCAGCAGAGTATaGATGGGCACTCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: APVREVHRGQRTPASSAPTGSRV*MGTPCP
Trigger: GGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGT...GGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGGACGGCGAAGGCCGGTaGCCACCACGCCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQDGEGR*PPRPEV
Trigger: GACCTCTGGGCGTGGTGGGCACCGGCCTTCGCCGTC...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR GCA 90 bp GACCCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGCCGATCGAAGACTGTCGCCATCTCCGCCTCTaGCCGCCCCGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DPTTPAHLAEHLVPIEDCRHLRL*PPRSSS
Trigger: GGAGGAGCTGCGGGGCGGGCAGAGGCGGAGATGGCG...ACAGTCTTCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp GTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTGGGGCCTTCTGGTCGCCAAACCCTaGTTCCCTCCCGCCCAACTC +
Preference number: 4 (lower is better)
Translates to: VAPCFVQPGSWQPWCWGLLVAKP*FPPAQL
Trigger: GAGTTGGGCGGGAGGGAAGCAGGGTTTGGCGACCAG...AAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR CCA 90 bp GGGCACCTTCCACACGCTCCAGGACTGTGTTTGCTCGGGGTCCCCCGAGGGATGCTTGTTGGCTTCAGCTaGGGGCACCAGCAAACACCC +
Preference number: 4 (lower is better)
Translates to: GHLPHAPGLCLLGVPRGMLVGFS*GHQQTP
Trigger: GGGTGTTTGCTGGTGCCCCCAGCTGAAGCCAACAAG...CATCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAAGGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGGGCCAGGCACTGGCATaGGCTCCACCACGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLGQALA*APPRAG
Trigger: GCCTGCACGTGGTGGAGCCCATGCCAGTGCCTGGCC...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCCGACGGGAACTTTTaGGTGCGAGTCTGGGACCCC +
Preference number: 4 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPPDGNF*VRVWDP
Trigger: GGGGTCCCAGACTCGCACCCAAAAGTTCCCGTCGGG...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR TCA 90 bp CTCCTGCACCTGCAGCTTCCACCGCTGCTGGGCACCTTCCACACGCTCCAGGACACCAGCCCATCTAGCTaGGCATCTTGTGCCGATCGA +
Preference number: 4 (lower is better)
Translates to: LLHLQLPPLLGTFHTLQDTSPSS*ASCADR
Trigger: TCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGT...GTCCTGGAGCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCTGCAGGTGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR TCA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGGATCGCATCCACTCCTaGGGCCGCCTCGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPDRIHS*GRLECL
Trigger: GAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATC...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCACTCAAGGCCCGGCTCTaGCCCGCGCATCACGTCCCA +
Preference number: 4 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSLKARL*PAHHVP
Trigger: TGGGACGTGATGCGCGGGTCAGAGCCGGGCCTTGAG...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR GCA 90 bp GTGCAGGTGAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATGCCCCAGTGGCTCCTGCTCTCGGGTaGATTGTGGGACAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: VQVRGPAAEYAWALHAPVAPALG*IVGQSL
Trigger: TAGGCTCTGTCCCACAATGCACCCGAGAGCAGGAGC...CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367333.6
CDS-3UTR GCA 90 bp GGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTGGATGCAGCAGCTGCTaGCATAGAGCGAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: GGKSGARRDRSHPLLRPPGCSSC*HRASIL
Trigger: GAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCC...AGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CGGGGTCCCCCGAGGGATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCGGATGCAGCAGCTGCTaGCATAGAGCGAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RGPPRDAAAAAIERASSFGCSSC*HRASIL
Trigger: GAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCC...GAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTCGGGGGACCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp AGGGAAGGGAGAAGTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGGGTCCCCCGAGGGATaGAGCAGCTGCTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: REGRSSPLLCPAWKLAAMGSPEG*SSCCHR
Trigger: TCTATGGCAGCAGCTGCTGCATCCCTCGGGGGACCC...CATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCCCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGGGAAGGGAGAAGTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGTGCAGCTTCCACCGCTaGTGGGCACCTTCCACACGC +
Preference number: 4 (lower is better)
Translates to: REGRSSPLLCPAWKLAAMCSFHR*WAPSTR
Trigger: GCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCTGCA...CATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCCCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCGGGGAGAGGAGGGACTaGCCAGACCCCTCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPAGERRD*PDPSSA
Trigger: TGCACTTGAGGGGTCTGGGCAGTCCCTCCTCTCCCC...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TGGGCACCTTCCACACGCTCCAGGACTGTGTTTGCTCGGGGTCCCCCGAGGGATACGGGAACTTTTGGGTaGGAGTCTGGGACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: WAPSTRSRTVFARGPPRDTGTFG*ESGTPA
Trigger: AGCAGGGGTCCCAGACTCGCACCCAAAAGTTCCCGT...ATCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAAGGTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp GTGCAGGTGAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATGCCCCAGTGGCTTATCAGGCTTGCTaGGCCAGCAAAGCCGGACAC +
Preference number: 4 (lower is better)
Translates to: VQVRGPAAEYAWALHAPVAYQAC*ASKAGH
Trigger: GTGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGC...CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCAGCTTCCACCGCTGCTaGGCACCTTCCACACGCTCC +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPASFHRC*APSTRS
Trigger: GGAGCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCT...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTTGGCAGCCATGGTGTTaGGGCCTTGACCCAACCACA +
Preference number: 4 (lower is better)
Translates to: GGKSGARRDRSHPLLRPPWQPWC*GLDPTT
Trigger: TGTGGTTGGGTCAAGGCCCCAACACCATGGCTGCCA...AGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTGGGGCCTTGGAAGCTGGCAGCCATaGTGTTGGGGCCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: VAPCFVQPGSWQPWCWGLGSWQP*CWGLDP
Trigger: TGGGTCAAGGCCCCAACACCATGGCTGCCAGCTTCC...AAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCCTGAGGCGCTGGGGCTaGGAGGGAGGTGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPALRRWG*EGGGDK
Trigger: CTTATCACCACCTCCCTCCCAGCCCCAGCGCCTCAG...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTGCAGCAGAGTATGCATaGGCACTCCATGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GGKSGARRDRSHPLLRPPAAEYA*ALHAPV
Trigger: CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGC...AGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GCCCCAGTGCGAGAAGTGCACAGGGGACAGCGAACACCAGCTTCCAGTGCACCCGCAGCAGAGTATGCATaGGCACTCCATGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: APVREVHRGQRTPASSAPAAEYA*ALHAPV
Trigger: CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGC...GGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTGGGGCCTTAGTGACTGTGGACACTaGGGAGAGGAGGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: VAPCFVQPGSWQPWCWGLSDCGH*GEEGLP
Trigger: GGGCAGTCCCTCCTCTCCCCAGTGTCCACAGTCACT...AAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GTGCAGGTGAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATGCCCCAGTGACCAGCCCATCTAGCTaGGCATCTTGTGCCGATCGA +
Preference number: 4 (lower is better)
Translates to: VQVRGPAAEYAWALHAPVTSPSS*ASCADR
Trigger: TCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGT...CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCATGGTGTTGGGGCCTTaGCCCAACCACACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPAMVLGP*PNHTSP
Trigger: TGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCAT...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp AGGGAAGGGAGAAGTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGATCGCATCCACTCCTaGGGCCGCCTCGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: REGRSSPLLCPAWKLAAMDRIHS*GRLECL
Trigger: GAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATC...CATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCCCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGCCCCTCAAGTGCAGGTaGGGGGACCGGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQPLKCR*GDRQQS
Trigger: ACTCTGCTGCCGGTCCCCTCACCTGCACTTGAGGGG...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp AGGGATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCTCCTCCTCATTGCTCAAGGCCCGGCTCTaGCCCGCGCATCACGTCCCA +
Preference number: 4 (lower is better)
Translates to: RDAAAAAIERASSFSSSLLKARL*PAHHVP
Trigger: TGGGACGTGATGCGCGGGTCAGAGCCGGGCCTTGAG...CAATGAGGAGGAGAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGGAGGCTTTCAGCTCCTaGTCTCGGGTGCATTGTGGG +
Preference number: 4 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPEAFSS*SRVHCG
Trigger: CCCACAATGCACCCGAGAGCAGGAGCTGAAAGCCTC...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367333.6
CDS-3UTR GCA 90 bp AGGGAAGGGAGAAGTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGTGCGCTCCTCGTACCTaGACTCGCACAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: REGRSSPLLCPAWKLAAMCAPRT*TRTAGS
Trigger: ACTGCCTGCTGTGCGAGTGCAGGTACGAGGAGCGCA...CATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCCCTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGGGGTCCCCCGAGGGATaGAGCAGCTGCTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLGSPEG*SSCCHR
Trigger: TCTATGGCAGCAGCTGCTGCATCCCTCGGGGGACCC...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TGGTGTTGGGGCCTTGACCCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGCGCTGCTCCTGCACCTaGAGCTTCCACCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WCWGLDPTTPAHLAEHLVRCSCT*SFHRCW
Trigger: CCAGCAGCGGTGGAAGCTGCAGGTGCAGGAGCAGCG...CACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCCCCCAGTGCGAGAAGTaGACAGGGGACAGCGAACAC +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPAPQCEK*TGDSEH
Trigger: GTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGG...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGTGCATGGGCACTCCATaGCCCAGTGCGAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPCMGTP*PSARSA
Trigger: TGCACTTCTCGCACTGGGGCATGGAGTGCCCATGCA...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGGGGGAGAGGAGGGACTaGCCAGACCCCTCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLGERRD*PDPSSA
Trigger: TGCACTTGAGGGGTCTGGGCAGTCCCTCCTCTCCCC...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GACCCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGCCGATCGAAGACTGTGGCCAGGCACTGGCATaGGCTCCACCACGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: DPTTPAHLAEHLVPIEDCGQALA*APPRAG
Trigger: GCCTGCACGTGGTGGAGCCCATGCCAGTGCCTGGCC...ACAGTCTTCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGAGCTTCCACCGCTGCTaGGCACCTTCCACACGCTCC +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLSFHRC*APSTRS
Trigger: GGAGCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCT...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTGGGGCCTTCTGCTTTGTCCAGCCTaGAAGCTGGCAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: VAPCFVQPGSWQPWCWGLLLCPA*KLAAMV
Trigger: CACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAG...AAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGACCCTGAAGACCCAGTaGGCTCAGGGGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQTLKTQ*AQGAQL
Trigger: GAGCTGGGCCCCCTGAGCCCACTGGGTCTTCAGGGT...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTACCCTGAAGACCCAGTaGGCTCAGGGGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLATLKTQ*AQGAQL
Trigger: GAGCTGGGCCCCCTGAGCCCACTGGGTCTTCAGGGT...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGGCAGCAGAGTATGCATaGGCACTCCATGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPAAEYA*ALHAPV
Trigger: CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGC...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGTTTTGGGTGCGAGTCTaGGACCCCTGCTCCGACGGC +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLFWVRV*DPCSDG
Trigger: GCCGTCGGAGCAGGGGTCCCAGACTCGCACCCAAAA...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR TCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGGCTTCCAGTGCACCCTaGAGACCCAGTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQASSAP*RPSGLR
Trigger: CCTGAGCCCACTGGGTCTTCAGGGTGCACTGGAAGC...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGGACCGTCTGGCTCAGTaGCTGTGGACACTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLDRLAQ*LWTLGR
Trigger: TCTCCCCAGTGTCCACAGTCACTGAGCCAGACGGTC...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCATGGGCTCCACCACGTaGAGGCAGTTGCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPAMGSTT*RQLQSF
Trigger: GAAGGACTGCAACTGCCTGCACGTGGTGGAGCCCAT...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGGGAAGGGAGAAGTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGATGGGCTCCACCACGTaGAGGCAGTTGCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: REGRSSPLLCPAWKLAAMMGSTT*RQLQSF
Trigger: GAAGGACTGCAACTGCCTGCACGTGGTGGAGCCCAT...CATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCCCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ACCTGCAGCTTCCACCGCTGCTGGGCACCTTCCACACGCTCCAGGACTGTGTTTATGGGCTCCACCACGTaGAGGCAGTTGCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TCSFHRCWAPSTRSRTVFMGSTT*RQLQSF
Trigger: GAAGGACTGCAACTGCCTGCACGTGGTGGAGCCCAT...AAACACAGTCCTGGAGCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCTGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp CGCTGCTGGGCACCTTCCACACGCTCCAGGACTGTGTTTGCTCGGGGTCCCCCGTCCTCATTGTGCAGTTaGTCAGTATATGCATCCGGC +
Preference number: 4 (lower is better)
Translates to: RCWAPSTRSRTVFARGPPSSLCS*SVYASG
Trigger: GCCGGATGCATATACTGAGCAACTGCACAATGAGGA...CGGGGGACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAAGGTGCCCAGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCGGATGCAGCAGCTGCTaGCATAGAGCGAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPAGCSSC*HRASIL
Trigger: GAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCC...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCTCCAGGACTGTGTTTaGTCGGGGTCCCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLALQDCV*SGSPEG
Trigger: TCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAG...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTCTCCAGGACTGTGTTTaGTCGGGGTCCCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: RRDRSHPLLRPPRMSPFPLQDCV*SGSPEG
Trigger: TCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAG...AGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTCTTCCGCTGCTCCTaGACCTGCAGCTTCCACCGC +
Preference number: 4 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSVFRCS*TCSFHR
Trigger: GCGGTGGAAGCTGCAGGTGCAGGAGCAGCGGAAGAC...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCGGAGAAGTAGCCCCCTaGTTTGTCCAGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPAGEVAP*FVQPGS
Trigger: GCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCC...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCCCAGTGCGAGAAGTaGACAGGGGACAGCGAACAC +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLPQCEK*TGDSEH
Trigger: GTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGG...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCTGCATGGGCACTCCATaGCCCAGTGCGAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPACMGTP*PSARSA
Trigger: TGCACTTCTCGCACTGGGGCATGGAGTGCCCATGCA...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTGGGGAGAGGAGGGACTaGCCAGACCCCTCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLAGERRD*PDPSSA
Trigger: TGCACTTGAGGGGTCTGGGCAGTCCCTCCTCTCCCC...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AGGGAAGGGAGAAGTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGCTTGTTGGCTTCAGCTaGGGGCACCAGCAAACACCC +
Preference number: 4 (lower is better)
Translates to: REGRSSPLLCPAWKLAAMLVGFS*GHQQTP
Trigger: GGGTGTTTGCTGGTGCCCCCAGCTGAAGCCAACAAG...CATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCCCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGAGGCCAGGCACTGGCATaGGCTCCACCACGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRGQALA*APPRAG
Trigger: GCCTGCACGTGGTGGAGCCCATGCCAGTGCCTGGCC...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTCATGGCCAGGCACTaGCATGGGCTCCACCACGTG +
Preference number: 4 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSVMARH*HGLHHV
Trigger: CACGTGGTGGAGCCCATGCCAGTGCCTGGCCATGAC...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACGTCATGGCCAGGCACTaGCATGGGCTCCACCACGTG +
Preference number: 4 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHVMARH*HGLHHV
Trigger: CACGTGGTGGAGCCCATGCCAGTGCCTGGCCATGAC...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp TGGTGTTGGGGCCTTGACCCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGGTCATGGCCAGGCACTaGCATGGGCTCCACCACGTG +
Preference number: 4 (lower is better)
Translates to: WCWGLDPTTPAHLAEHLVVMARH*HGLHHV
Trigger: CACGTGGTGGAGCCCATGCCAGTGCCTGGCCATGAC...CACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp AGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTAGCTTCCACCGCTGCTaGGCACCTTCCACACGCTCC +
Preference number: 4 (lower is better)
Translates to: RRDRSHPLLRPPRMSPFPSFHRC*APSTRS
Trigger: GGAGCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCT...AGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp ATCTTGTGCCGATCGAAGACTGTCTTCCGCTGCTCCTGCACCTGCAGCTTCCACAGCTTCCACCGCTGCTaGGCACCTTCCACACGCTCC +
Preference number: 4 (lower is better)
Translates to: ILCRSKTVFRCSCTCSFHSFHRC*APSTRS
Trigger: GGAGCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCT...GTGGAAGCTGCAGGTGCAGGAGCAGCGGAAGACAGTCTTCGATCGGCACAAGAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACGTCCAGCCTGGAAGCTaGCAGCCATGGTGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHVQPGS*QPWCWG
Trigger: GCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGAC...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CATCTTGTGCCGATCGAAGACTGTCTTCCGCTGCTCCTGCACCTGCAGCTTCCATTTTGGGTGCGAGTCTaGGACCCCTGCTCCGACGGC +
Preference number: 4 (lower is better)
Translates to: HLVPIEDCLPLLLHLQLPFWVRV*DPCSDG
Trigger: GCCGTCGGAGCAGGGGTCCCAGACTCGCACCCAAAA...TGGAAGCTGCAGGTGCAGGAGCAGCGGAAGACAGTCTTCGATCGGCACAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp TGGGGCCTTGACCCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGCCGATCAACCATCCGGCCAAGTaGGAATGGGGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WGLDPTTPAHLAEHLVPINHPAK*EWGWGL
Trigger: CAGCCCCCAACCCCATTCCCACTTGGCCGGATGGTT...GATCGGCACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGGGTCAAGGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR TCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACATGGTGTTGGGGCCTTaGCCCAACCACACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHMVLGP*PNHTSP
Trigger: TGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCAT...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGATCGCATCCACTCCTaGGGCCGCCTCGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSDRIHS*GRLECL
Trigger: GAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATC...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GTGCAGGTGAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATGCCCCAGTGGAAAGGAACACATGCTaGATGCTGGGCCATGCTTTC +
Preference number: 4 (lower is better)
Translates to: VQVRGPAAEYAWALHAPVERNTC*MLGHAF
Trigger: GAAAGCATGGCCCAGCATTCAGCATGTGTTCCTTTC...CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp CCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGACCCCCTCAAGTGCAGGTaGGGGGACCGGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PSPSLQPQRPKKTTEIRDPLKCR*GDRQQS
Trigger: ACTCTGCTGCCGGTCCCCTCACCTGCACTTGAGGGG...GTCTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACGACCGTCTGGCTCAGTaGCTGTGGACACTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHDRLAQ*LWTLGR
Trigger: TCTCCCCAGTGTCCACAGTCACTGAGCCAGACGGTC...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTGACCGTCTGGCTCAGTaGCTGTGGACACTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLADRLAQ*LWTLGR
Trigger: TCTCCCCAGTGTCCACAGTCACTGAGCCAGACGGTC...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACTGCGCTCCTCGTACCTaGACTCGCACAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHCAPRT*TRTAGS
Trigger: ACTGCCTGCTGTGCGAGTGCAGGTACGAGGAGCGCA...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGGGATGCAGCAGCTGCTaGCATAGAGCGAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLGCSSC*HRASIL
Trigger: GAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCC...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GACCCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGCCGATCGAAGACTGTCTCCAGGACTGTGTTTaGTCGGGGTCCCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: DPTTPAHLAEHLVPIEDCLQDCV*SGSPEG
Trigger: TCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAG...ACAGTCTTCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp GATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCTCCTCCTCATTGTGCTGCAGCTTCCACCGCTaGTGGGCACCTTCCACACGC +
Preference number: 4 (lower is better)
Translates to: DAAAAAIERASSFSSSLCCSFHR*WAPSTR
Trigger: GCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCTGCA...GCACAATGAGGAGGAGAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCAAGACTGTCTTCCGCTaGTCCTGCACCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPAKTVFR*SCTCSF
Trigger: GAAGCTGCAGGTGCAGGAGCAGCGGAAGACAGTCTT...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ACCTGCAGCTTCCACCGCTGCTGGGCACCTTCCACACGCTCCAGGACTGTGTTTAAGACTGTCTTCCGCTaGTCCTGCACCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TCSFHRCWAPSTRSRTVFKTVFR*SCTCSF
Trigger: GAAGCTGCAGGTGCAGGAGCAGCGGAAGACAGTCTT...AAACACAGTCCTGGAGCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCTGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGGGAGAAGTAGCCCCCTaGTTTGTCCAGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLGEVAP*FVQPGS
Trigger: GCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCC...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTGGGGCCTTGGAACACATGCTGAATaGTGGGCCATGCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VAPCFVQPGSWQPWCWGLGTHAE*WAMLSS
Trigger: GGAGGAAAGCATGGCCCAGCATTCAGCATGTGTTCC...AAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGGGAACACATGCTGAATaGTGGGCCATGCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPGTHAE*WAMLSS
Trigger: GGAGGAAAGCATGGCCCAGCATTCAGCATGTGTTCC...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCACCCCAGTGCGAGAAGTaGACAGGGGACAGCGAACAC +
Preference number: 4 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSPQCEK*TGDSEH
Trigger: GTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGG...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGCCCCAGTGCGAGAAGTaGACAGGGGACAGCGAACAC +
Preference number: 4 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQPQCEK*TGDSEH
Trigger: GTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGG...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGTGGCAGCCATGGTGTTaGGGCCTTGACCCAACCACA +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLWQPWC*GLDPTT
Trigger: TGTGGTTGGGTCAAGGCCCCAACACCATGGCTGCCA...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGGGAAGCTGGCAGCCATaGTGTTGGGGCCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQGSWQP*CWGLDP
Trigger: TGGGTCAAGGCCCCAACACCATGGCTGCCAGCTTCC...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAAGTGACTGTGGACACTaGGGAGAGGAGGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSSDCGH*GEEGLP
Trigger: GGGCAGTCCCTCCTCTCCCCAGTGTCCACAGTCACT...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTAGTGACTGTGGACACTaGGGAGAGGAGGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLASDCGH*GEEGLP
Trigger: GGGCAGTCCCTCCTCTCCCCAGTGTCCACAGTCACT...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCTTCCAACCGACCGTCTaGCTCAGTGACTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPAFQPTV*LSDCGH
Trigger: GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAA...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTAACCATCCGGCCAAGTaGGAATGGGGTTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RRDRSHPLLRPPRMSPFPNHPAK*EWGWGL
Trigger: CAGCCCCCAACCCCATTCCCACTTGGCCGGATGGTT...AGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR TCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGACCAGCCCATCTAGCTaGGCATCTTGTGCCGATCGA +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLTSPSS*ASCADR
Trigger: TCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGT...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGGAAAGGAACACATGCTaGATGCTGGGCCATGCTTTC +
Preference number: 4 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPERNTC*MLGHAF
Trigger: GAAAGCATGGCCCAGCATTCAGCATGTGTTCCTTTC...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGAGCTTCCAGTGCACCCTaGAGACCCAGTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRASSAP*RPSGLR
Trigger: CCTGAGCCCACTGGGTCTTCAGGGTGCACTGGAAGC...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp CCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGACGCTTCCAGTGCACCCTaGAGACCCAGTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSPSLQPQRPKKTTEIRDASSAP*RPSGLR
Trigger: CCTGAGCCCACTGGGTCTTCAGGGTGCACTGGAAGC...GTCTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCGGACACCTCACATTaGAGTCATAGAGGGATCTGT +
Preference number: 4 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPPDTSH*SHRGIC
Trigger: ACAGATCCCTCTATGACTGCAATGTGAGGTGTCCGG...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367333.6
CDS-3UTR GCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCATGCTTATCAGGCTTaGTGGGCCAGCAAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLHAYQA*WASKAG
Trigger: TCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATG...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTATGGGCTCCACCACGTaGAGGCAGTTGCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RRDRSHPLLRPPRMSPFPMGSTT*RQLQSF
Trigger: GAAGGACTGCAACTGCCTGCACGTGGTGGAGCCCAT...AGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAATGGGCTCCACCACGTaGAGGCAGTTGCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSMGSTT*RQLQSF
Trigger: GAAGGACTGCAACTGCCTGCACGTGGTGGAGCCCAT...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTGCAGGTGAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATGCCCCAGTGCAGTTGCTCAGTATATaGATCCGGCTTTCGGATCAG +
Preference number: 4 (lower is better)
Translates to: VQVRGPAAEYAWALHAPVQLLSI*IRLSDQ
Trigger: CTGATCCGAAAGCCGGATGCATATACTGAGCAACTG...CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTGGATGCAGCAGCTGCTaGCATAGAGCGAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLAGCSSC*HRASIL
Trigger: GAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCC...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACGAGGGATGCAGCAGCTaGTGCCATAGAGCGAGCATC +
Preference number: 4 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHEGCSS*CHRASI
Trigger: GATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTC...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGACGTCTTCCGCTGCTCCTaGACCTGCAGCTTCCACCGC +
Preference number: 4 (lower is better)
Translates to: PSPSLQPQRPKKTTEIRDVFRCS*TCSFHR
Trigger: GCGGTGGAAGCTGCAGGTGCAGGAGCAGCGGAAGAC...GTCTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTGGAGAAGTAGCCCCCTaGTTTGTCCAGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLAGEVAP*FVQPGS
Trigger: GCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCC...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGCATGGGCACTCCATaGCCCAGTGCGAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQCMGTP*PSARSA
Trigger: TGCACTTCTCGCACTGGGGCATGGAGTGCCCATGCA...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TGCCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGCGTCCCCTCCCCCAATaGCGCGTCCACGAACCTACA +
Preference number: 4 (lower is better)
Translates to: CLPPPFNPKDPRRQQRSERPLPQ*RVHEPT
Trigger: TGTAGGTTCGTGGACGCGGCATTGGGGGAGGGGACG...CTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR GCA 90 bp GCCATAGAGCGAGCATCCTCATTCTCCTCCTCATTGTGCAGTTGCTCAGTATATGACGGCGAAGGCCGGTaGCCACCACGCCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: AIERASSFSSSLCSCSVYDGEGR*PPRPEV
Trigger: GACCTCTGGGCGTGGTGGGCACCGGCCTTCGCCGTC...ATATACTGAGCAACTGCACAATGAGGAGGAGAATGAGGATGCTCGCTCTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGCTTATCAGGCTTGCTaGGCCAGCAAAGCCGGACAC +
Preference number: 4 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSAYQAC*ASKAGH
Trigger: GTGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGC...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCACTTGTTGGCTTCAGCTaGGGGCACCAGCAAACACCC +
Preference number: 4 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSLVGFS*GHQQTP
Trigger: GGGTGTTTGCTGGTGCCCCCAGCTGAAGCCAACAAG...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTCTTGTTGGCTTCAGCTaGGGGCACCAGCAAACACCC +
Preference number: 4 (lower is better)
Translates to: RRDRSHPLLRPPRMSPFPLVGFS*GHQQTP
Trigger: GGGTGTTTGCTGGTGCCCCCAGCTGAAGCCAACAAG...AGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGACGTCATGGCCAGGCACTaGCATGGGCTCCACCACGTG +
Preference number: 4 (lower is better)
Translates to: PSPSLQPQRPKKTTEIRDVMARH*HGLHHV
Trigger: CACGTGGTGGAGCCCATGCCAGTGCCTGGCCATGAC...GTCTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACCTGCTTTGTCCAGCCTaGAAGCTGGCAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHLLCPA*KLAAMV
Trigger: CACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAG...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp TGCCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGCTGAGGCGCTGGGGCTaGGAGGGAGGTGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: CLPPPFNPKDPRRQQRSELRRWG*EGGGDK
Trigger: CTTATCACCACCTCCCTCCCAGCCCCAGCGCCTCAG...CTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGACCTGAGGCGCTGGGGCTaGGAGGGAGGTGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: PSPSLQPQRPKKTTEIRDLRRWG*EGGGDK
Trigger: CTTATCACCACCTCCCTCCCAGCCCCAGCGCCTCAG...GTCTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGTTCCAACCGACCGTCTaGCTCAGTGACTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLFQPTV*LSDCGH
Trigger: GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAA...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GAGGGATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCTCCTCCTCATTAATGGGGTTGGGGGCTaGGCTCCAGGATTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: EGCSSCCHRASILILLLINGVGG*APGFQG
Trigger: GCCTTGGAATCCTGGAGCCCAGCCCCCAACCCCATT...AATGAGGAGGAGAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACAAGTGGGAATGGGGTTaGGGGCTGGGCTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHKWEWG*GLGSRI
Trigger: AATCCTGGAGCCCAGCCCCCAACCCCATTCCCACTT...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR TCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTACCAGCCCATCTAGCTaGGCATCTTGTGCCGATCGA +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLATSPSS*ASCADR
Trigger: TCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGT...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTGGGGCCTTCAGACACTGAGTTCCTaGAGACCCAGCTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: VAPCFVQPGSWQPWCWGLQTLSS*RPSFIF
Trigger: GAAGATAAAGCTGGGTCTTCAGGAACTCAGTGTCTG...AAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GCCCCAGTGCGAGAAGTGCACAGGGGACAGCGAACACCAGCTTCCAGTGCACCCAAGATAAGAGCTTCATaGTTATCAGGCTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: APVREVHRGQRTPASSAPKIRAS*LSGLLG
Trigger: GCCCAGCAAGCCTGATAAGCATGAAGCTCTTATCTT...GGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TGCCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGTGCGCTCCTCGTACCTaGACTCGCACAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: CLPPPFNPKDPRRQQRSECAPRT*TRTAGS
Trigger: ACTGCCTGCTGTGCGAGTGCAGGTACGAGGAGCGCA...CTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CTCCTGCACCTGCAGCTTCCACCGCTGCTGGGCACCTTCCACACGCTCCAGGACTTCTCCTCCTCATTGTaGAGTTGCTCAGTATATGCA +
Preference number: 4 (lower is better)
Translates to: LLHLQLPPLLGTFHTLQDFSSSL*SCSVYA
Trigger: TGCATATACTGAGCAACTGCACAATGAGGAGGAGAA...GTCCTGGAGCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCTGCAGGTGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTAAGACTGTCTTCCGCTaGTCCTGCACCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLAKTVFR*SCTCSF
Trigger: GAAGCTGCAGGTGCAGGAGCAGCGGAAGACAGTCTT...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGAAGACTGTCTTCCGCTaGTCCTGCACCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQKTVFR*SCTCSF
Trigger: GAAGCTGCAGGTGCAGGAGCAGCGGAAGACAGTCTT...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGGGAACACATGCTGAATaGTGGGCCATGCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLGTHAE*WAMLSS
Trigger: GGAGGAAAGCATGGCCCAGCATTCAGCATGTGTTCC...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACAACACCAGCTTCCAGTaGACCCTGAAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHNTSFQ*TLKTQW
Trigger: CCACTGGGTCTTCAGGGTGCACTGGAAGCTGGTGTT...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCTTCAGAACTCTTGTTaGCTTCAGCTGGGGGCACCA +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLLQNSC*LQLGAP
Trigger: TGGTGCCCCCAGCTGAAGCCAACAAGAGTTCTGAAG...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGAGGAAGCTGGCAGCCATaGTGTTGGGGCCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRGSWQP*CWGLDP
Trigger: TGGGTCAAGGCCCCAACACCATGGCTGCCAGCTTCC...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACTTCCAACCGACCGTCTaGCTCAGTGACTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHFQPTV*LSDCGH
Trigger: GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAA...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GTGCAGGTGAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATGCCCCAGTGTTTCTCTCCATGCACTaGTACAACGAAGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VQVRGPAAEYAWALHAPVFLSMH*YNEVQG
Trigger: TCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAA...CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CTCCTCATTGTGCAGTTGCTCAGTATATGCATCCGGCTTTCGGATCAGAGGGTCCCCGACGGGAACTTTTaGGTGCGAGTCTGGGACCCC +
Preference number: 4 (lower is better)
Translates to: LLIVQLLSICIRLSDQRVPDGNF*VRVWDP
Trigger: GGGGTCCCAGACTCGCACCCAAAAGTTCCCGTCGGG...GACCCTCTGATCCGAAAGCCGGATGCATATACTGAGCAACTGCACAATGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR TCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCCAGACACTGAGTTCCTaGAGACCCAGCTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPAQTLSS*RPSFIF
Trigger: GAAGATAAAGCTGGGTCTTCAGGAACTCAGTGTCTG...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGGGAAGGGAGAAGTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGTCCTCATTGTGCAGTTaGTCAGTATATGCATCCGGC +
Preference number: 4 (lower is better)
Translates to: REGRSSPLLCPAWKLAAMSSLCS*SVYASG
Trigger: GCCGGATGCATATACTGAGCAACTGCACAATGAGGA...CATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCCCTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCTCCTCATTGTGCAGTTaGTCAGTATATGCATCCGGC +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPASSLCS*SVYASG
Trigger: GCCGGATGCATATACTGAGCAACTGCACAATGAGGA...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTGGAACACATGCTGAATaGTGGGCCATGCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRDRSHPLLRPPRMSPFPGTHAE*WAMLSS
Trigger: GGAGGAAAGCATGGCCCAGCATTCAGCATGTGTTCC...AGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCCGAGTCTGGGACCCCTaGTCCGACGGCGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIARVWDP*SDGEGR
Trigger: CCGGCCTTCGCCGTCGGAGCAGGGGTCCCAGACTCG...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR GCA 90 bp ATCCTCATTCTCCTCCTCATTGTGCAGTTGCTCAGTATATGCATCCGGCTTTCGTCGAGGGGACACCGCTaGCAGGGGCCTCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: ILILLLIVQLLSICIRLSSRGHR*QGPPVP
Trigger: AGGAACTGGAGGCCCCTGGCAGCGGTGTCCCCTCGA...CGAAAGCCGGATGCATATACTGAGCAACTGCACAATGAGGAGGAGAATGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp TTGTGCAGTTGCTCAGTATATGCATCCGGCTTTCGGATCAGAGGGTCCACCAGCGCTTATCAGGCTTGCTaGGCCAGCAAAGCCGGACAC +
Preference number: 4 (lower is better)
Translates to: LCSCSVYASGFRIRGSTSAYQAC*ASKAGH
Trigger: GTGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGC...GCTGGTGGACCCTCTGATCCGAAAGCCGGATGCATATACTGAGCAACTGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp AGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTCTTCAGAACTCTTGTTaGCTTCAGCTGGGGGCACCA +
Preference number: 4 (lower is better)
Translates to: RRDRSHPLLRPPRMSPFPLQNSC*LQLGAP
Trigger: TGGTGCCCCCAGCTGAAGCCAACAAGAGTTCTGAAG...AGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CATCTTGTGCCGATCGAAGACTGTCTTCCGCTGCTCCTGCACCTGCAGCTTCCACTTCAGAACTCTTGTTaGCTTCAGCTGGGGGCACCA +
Preference number: 4 (lower is better)
Translates to: HLVPIEDCLPLLLHLQLPLQNSC*LQLGAP
Trigger: TGGTGCCCCCAGCTGAAGCCAACAAGAGTTCTGAAG...TGGAAGCTGCAGGTGCAGGAGCAGCGGAAGACAGTCTTCGATCGGCACAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp GTGCAGGTGAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATGCCCCAGTGGATGTTTCTATAAGGTaGACAGATGCATTTGCACCG +
Preference number: 4 (lower is better)
Translates to: VQVRGPAAEYAWALHAPVDVSIR*TDAFAP
Trigger: CGGTGCAAATGCATCTGTCCACCTTATAGAAACATC...CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAGGCCAGGCACTGGCATaGGCTCCACCACGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPGQALA*APPRAG
Trigger: GCCTGCACGTGGTGGAGCCCATGCCAGTGCCTGGCC...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGACTGCTTTGTCCAGCCTaGAAGCTGGCAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRLLCPA*KLAAMV
Trigger: CACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAG...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTCAAGTACAGGGGCTGTaGTGTTCAGATCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: RRDRSHPLLRPPRMSPFPQVQGL*CSDPRS
Trigger: TGAGCGTGGATCTGAACACCACAGCCCCTGTACTTG...AGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGCCGATCGAAGACTGTCTTAAGTGGGAATGGGGTTaGGGGCTGGGCTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: PTTPAHLAEHLVPIEDCLKWEWG*GLGSRI
Trigger: AATCCTGGAGCCCAGCCCCCAACCCCATTCCCACTT...AAGACAGTCTTCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR TCA 90 bp GTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTGGGGCCTTTGTAAATGTGCCCACTaGTGTTTCTATAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: VAPCFVQPGSWQPWCWGLCKCAH*CFYKVD
Trigger: GTCCACCTTATAGAAACATCAGTGGGCACATTTACA...AAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GGTCCCCCGAGGGATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCTCCTGTAAATGTGCCCACTaGTGTTTCTATAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: GPPRDAAAAAIERASSFSCKCAH*CFYKVD
Trigger: GTCCACCTTATAGAAACATCAGTGGGCACATTTACA...GGAGAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTCGGGGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR TCA 90 bp CCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGACACCAGCCCATCTAGCTaGGCATCTTGTGCCGATCGA +
Preference number: 4 (lower is better)
Translates to: PSPSLQPQRPKKTTEIRDTSPSS*ASCADR
Trigger: TCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGT...GTCTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAAGGGGGAGAGGAGGGACTaGCCAGACCCCTCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: IFSPCTGTTKFRDKRQPKGERRD*PDPSSA
Trigger: TGCACTTGAGGGGTCTGGGCAGTCCCTCCTCTCCCC...CTTGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCATCGAGGGGACACCGCTaGCAGGGGCCTCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPSRGHR*QGPPVP
Trigger: AGGAACTGGAGGCCCCTGGCAGCGGTGTCCCCTCGA...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR CCA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCACGGAGAAGGGGAAGGTaGCCACACCGCAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPRRRGR*PHRSQH
Trigger: GTGCTGGCTGCGGTGTGGCCACCTTCCCCTTCTCCG...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR TCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCCCCTCAAGTGCAGGTaGGGGGACCGGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSPLKCR*GDRQQS
Trigger: ACTCTGCTGCCGGTCCCCTCACCTGCACTTGAGGGG...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGTATAAGGTGGACAGATaGATTTGCACCGGATATCTT +
Preference number: 4 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPYKVDR*ICTGYL
Trigger: AAGATATCCGGTGCAAATGCATCTGTCCACCTTATA...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCTTCTCCTCCTCATTGTaGAGTTGCTCAGTATATGCA +
Preference number: 4 (lower is better)
Translates to: IASTPEAASNVSIPFWPAFSSSL*SCSVYA
Trigger: TGCATATACTGAGCAACTGCACAATGAGGAGGAGAA...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCATGCAGCTTCCACCGCTaGTGGGCACCTTCCACACGC +
Preference number: 4 (lower is better)
Translates to: GQNFLSMHWYNEVQGQEACSFHR*WAPSTR
Trigger: GCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCTGCA...TGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCCGCTGCTCCTGCACCTaGAGCTTCCACCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIARCSCT*SFHRCW
Trigger: CCAGCAGCGGTGGAAGCTGCAGGTGCAGGAGCAGCG...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AAGACCCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAACGCTGCTCCTGCACCTaGAGCTTCCACCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KTQEDNRDQRPHPSSLIKRCSCT*SFHRCW
Trigger: CCAGCAGCGGTGGAAGCTGCAGGTGCAGGAGCAGCG...TTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCGCTGCTCCTGCACCTaGAGCTTCCACCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSRCSCT*SFHRCW
Trigger: CCAGCAGCGGTGGAAGCTGCAGGTGCAGGAGCAGCG...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTAAAATTTTCTCTCCATaGACTGGTACAACGAAGTTC +
Preference number: 4 (lower is better)
Translates to: GGKSGARRDRSHPLLRPPKIFSP*TGTTKF
Trigger: GAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTT...AGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGGCCAGGCACTGGCATaGGCTCCACCACGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQGQALA*APPRAG
Trigger: GCCTGCACGTGGTGGAGCCCATGCCAGTGCCTGGCC...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp TGCCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGACACATGCTGAATGCTaGGCCATGCTTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CLPPPFNPKDPRRQQRSETHAEC*AMLSSQ
Trigger: CTGGGAGGAAAGCATGGCCCAGCATTCAGCATGTGT...CTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGAACACATGCTGAATGCTaGGCCATGCTTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRTHAEC*AMLSSQ
Trigger: CTGGGAGGAAAGCATGGCCCAGCATTCAGCATGTGT...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCACTGAGGCGCTGGGGCTaGGAGGGAGGTGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: GQNFLSMHWYNEVQGQEALRRWG*EGGGDK
Trigger: CTTATCACCACCTCCCTCCCAGCCCCAGCGCCTCAG...TGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCACCCTGAAGACCCAGTaGGCTCAGGGGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSTLKTQ*AQGAQL
Trigger: GAGCTGGGCCCCCTGAGCCCACTGGGTCTTCAGGGT...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGACCAAGTACAGGGGCTGTaGTGTTCAGATCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: PSPSLQPQRPKKTTEIRDQVQGL*CSDPRS
Trigger: TGAGCGTGGATCTGAACACCACAGCCCCTGTACTTG...GTCTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGACAAGTACAGGGGCTGTaGTGTTCAGATCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRQVQGL*CSDPRS
Trigger: TGAGCGTGGATCTGAACACCACAGCCCCTGTACTTG...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
3UTR CAA 72 bp GCTGCCATAGAGCGAGCATCCTCATTCTCCTCCTCATaGTGCAGTTGCTCAGTATATGCATCCGGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: AAIERASSFSSS*CSCSVYASGFR
Trigger: CCGAAAGCCGGATGCATATACTGAGCAACTGCACAATGAGGAGGAGAATGAGGATGCTCGCTCTATGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR TCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGTGTAAATGTGCCCACTaGTGTTTCTATAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLCKCAH*CFYKVD
Trigger: GTCCACCTTATAGAAACATCAGTGGGCACATTTACA...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAGATCGCATCCACTCCTaGGGCCGCCTCGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPDRIHS*GRLECL
Trigger: GAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATC...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGAAGATAAGAGCTTCATaGTTATCAGGCTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQKIRAS*LSGLLG
Trigger: GCCCAGCAAGCCTGATAAGCATGAAGCTCTTATCTT...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTGTGGACAGATGCATTTaGACCGGATATCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLAVDRCI*TGYLQN
Trigger: GTTCTGAAGATATCCGGTGCAAATGCATCTGTCCAC...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACTCCAGGACTGTGTTTaGTCGGGGTCCCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: DKIFSPCTGTTKFRDKRQLQDCV*SGSPEG
Trigger: TCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAG...TTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAATGCAGCTTCCACCGCTaGTGGGCACCTTCCACACGC +
Preference number: 4 (lower is better)
Translates to: DKIFSPCTGTTKFRDKRQCSFHR*WAPSTR
Trigger: GCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCTGCA...TTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCGTCTTCCGCTGCTCCTaGACCTGCAGCTTCCACCGC +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSVFRCS*TCSFHR
Trigger: GCGGTGGAAGCTGCAGGTGCAGGAGCAGCGGAAGAC...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCGGCAGCAGAGTATaGATGGGCACTCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: GQNFLSMHWYNEVQGQEATGSRV*MGTPCP
Trigger: GGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGT...TGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGCCGATCGAAGACTGTCTTATGACAATGATGACCTaGACTCGCACAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PTTPAHLAEHLVPIEDCLMTMMT*TRTAGS
Trigger: ACTGCCTGCTGTGCGAGTGCAGGTCATCATTGTCAT...AAGACAGTCTTCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp AGATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGGATGTTTCTATAAGGTaGACAGATGCATTTGCACCG +
Preference number: 4 (lower is better)
Translates to: RSHPLLRPPRMSPFPSGLDVSIR*TDAFAP
Trigger: CGGTGCAAATGCATCTGTCCACCTTATAGAAACATC...CAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AAGACCCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAAGCTTCCACCGCTGCTaGGCACCTTCCACACGCTCC +
Preference number: 4 (lower is better)
Translates to: KTQEDNRDQRPHPSSLIKSFHRC*APSTRS
Trigger: GGAGCGTGTGGAAGGTGCCCAGCAGCGGTGGAAGCT...TTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAAGTCCAGCCTGGAAGCTaGCAGCCATGGTGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: DKIFSPCTGTTKFRDKRQVQPGS*QPWCWG
Trigger: GCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGAC...TTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTTTTCTCTCCATGCACTaGTACAACGAAGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLAFLSMH*YNEVQG
Trigger: TCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAA...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCTGCGCTCCTCGTACCTaGACTCGCACAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSCAPRT*TRTAGS
Trigger: ACTGCCTGCTGTGCGAGTGCAGGTACGAGGAGCGCA...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TGCCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGCAGTTGCTCAGTATATaGATCCGGCTTTCGGATCAG +
Preference number: 4 (lower is better)
Translates to: CLPPPFNPKDPRRQQRSEQLLSI*IRLSDQ
Trigger: CTGATCCGAAAGCCGGATGCATATACTGAGCAACTG...CTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGATCCTCATTGTGCAGTTaGTCAGTATATGCATCCGGC +
Preference number: 4 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRSSLCS*SVYASG
Trigger: GCCGGATGCATATACTGAGCAACTGCACAATGAGGA...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACTTCTCCTCCTCATTGTaGAGTTGCTCAGTATATGCA +
Preference number: 4 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHFSSSL*SCSVYA
Trigger: TGCATATACTGAGCAACTGCACAATGAGGAGGAGAA...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGGGTCCCCCGAGGGATaGAGCAGCTGCTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQGSPEG*SSCCHR
Trigger: TCTATGGCAGCAGCTGCTGCATCCCTCGGGGGACCC...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCACCGGCAGCAGAGTATaGATGGGCACTCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSTGSRV*MGTPCP
Trigger: GGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGT...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCACCGGCAGCAGAGTATaGATGGGCACTCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIATGSRV*MGTPCP
Trigger: GGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGT...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AGGGAAGGGAGAAGTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGAAAATTTTCTCTCCATaGACTGGTACAACGAAGTTC +
Preference number: 4 (lower is better)
Translates to: REGRSSPLLCPAWKLAAMKIFSP*TGTTKF
Trigger: GAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTT...CATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCCCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCACACCTACAAGCCCGCTaGAGCCGCAAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: GQNFLSMHWYNEVQGQEAHLQAR*SRKRPS
Trigger: ACTGGGTCTTTTGCGGCTGCAGCGGGCTTGTAGGTG...TGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367332.5
ENST00000367334.9
CDS-3UTR CCA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAGCTTATCAGGCTTGCTaGGCCAGCAAAGCCGGACAC +
Preference number: 4 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPAYQAC*ASKAGH
Trigger: GTGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGC...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTGATGTTTCTATAAGGTaGACAGATGCATTTGCACCG +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLADVSIR*TDAFAP
Trigger: CGGTGCAAATGCATCTGTCCACCTTATAGAAACATC...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp TGGTGTTGGGGCCTTGACCCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGGATGTTTCTATAAGGTaGACAGATGCATTTGCACCG +
Preference number: 4 (lower is better)
Translates to: WCWGLDPTTPAHLAEHLVDVSIR*TDAFAP
Trigger: CGGTGCAAATGCATCTGTCCACCTTATAGAAACATC...CACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGTCATGGCCAGGCACTaGCATGGGCTCCACCACGTG +
Preference number: 4 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQVMARH*HGLHHV
Trigger: CACGTGGTGGAGCCCATGCCAGTGCCTGGCCATGAC...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCATGGCAGCCATGGTGTTaGGGCCTTGACCCAACCACA +
Preference number: 4 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPWQPWC*GLDPTT
Trigger: TGTGGTTGGGTCAAGGCCCCAACACCATGGCTGCCA...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp GACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAAGGAAGCTGGCAGCCATaGTGTTGGGGCCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: DKIFSPCTGTTKFRDKRQGSWQP*CWGLDP
Trigger: TGGGTCAAGGCCCCAACACCATGGCTGCCAGCTTCC...TTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCAGTGACTGTGGACACTaGGGAGAGGAGGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSSDCGH*GEEGLP
Trigger: GGGCAGTCCCTCCTCTCCCCAGTGTCCACAGTCACT...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAATGGTGTTGGGGCCTTaGCCCAACCACACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQMVLGP*PNHTSP
Trigger: TGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCAT...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTTATAAGGTGGACAGATaGATTTGCACCGGATATCTT +
Preference number: 4 (lower is better)
Translates to: VFRSTLSLESHVPTDRLAYKVDR*ICTGYL
Trigger: AAGATATCCGGTGCAAATGCATCTGTCCACCTTATA...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AAGACCCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAGAGGGATGCAGCAGCTaGTGCCATAGAGCGAGCATC +
Preference number: 4 (lower is better)
Translates to: KTQEDNRDQRPHPSSLIKEGCSS*CHRASI
Trigger: GATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTC...TTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCGAGGGATGCAGCAGCTaGTGCCATAGAGCGAGCATC +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIAEGCSS*CHRASI
Trigger: GATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCTC...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAAACACCAGCTTCCAGTaGACCCTGAAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPNTSFQ*TLKTQW
Trigger: CCACTGGGTCTTCAGGGTGCACTGGAAGCTGGTGTT...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAAACACCAGCTTCCAGTaGACCCTGAAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GQNFLSMHWYNEVQGQEANTSFQ*TLKTQW
Trigger: CCACTGGGTCTTCAGGGTGCACTGGAAGCTGGTGTT...TGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCTGCATGGGCACTCCATaGCCCAGTGCGAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSCMGTP*PSARSA
Trigger: TGCACTTCTCGCACTGGGGCATGGAGTGCCCATGCA...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCCACCTACAAGCCCGCTaGAGCCGCAAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIAHLQAR*SRKRPS
Trigger: ACTGGGTCTTTTGCGGCTGCAGCGGGCTTGTAGGTG...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367332.5
ENST00000367334.9
CDS-3UTR CCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCGCTTATCAGGCTTGCTaGGCCAGCAAAGCCGGACAC +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIAAYQAC*ASKAGH
Trigger: GTGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGC...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCCTTGTTGGCTTCAGCTaGGGGCACCAGCAAACACCC +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIALVGFS*GHQQTP
Trigger: GGGTGTTTGCTGGTGCCCCCAGCTGAAGCCAACAAG...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp ATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAAGCTTCAGAACTCTTGTTaGCTTCAGCTGGGGGCACCA +
Preference number: 4 (lower is better)
Translates to: IFSPCTGTTKFRDKRQPKLQNSC*LQLGAP
Trigger: TGGTGCCCCCAGCTGAAGCCAACAAGAGTTCTGAAG...CTTGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCCTGCTTTGTCCAGCCTaGAAGCTGGCAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIALLCPA*KLAAMV
Trigger: CACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAG...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCGCAGCAGAGTATGCATaGGCACTCCATGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSAAEYA*ALHAPV
Trigger: CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGC...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCTCTCCCTCACCTTGTTaGCTTCAGCTGGGGGCACCA +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSSPSPC*LQLGAP
Trigger: TGGTGCCCCCAGCTGAAGCCAACAAGGTGAGGGAGA...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367332.5
CDS-3UTR CCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAAATGGGGTTGGGGGCTaGGCTCCAGGATTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQNGVGG*APGFQG
Trigger: GCCTTGGAATCCTGGAGCCCAGCCCCCAACCCCATT...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR GCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCCATGCTTATCAGGCTTaGTGGGCCAGCAAAGCCGGA +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIAHAYQA*WASKAG
Trigger: TCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATG...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CTCCTCATTGTGCAGTTGCTCAGTATATGCATCCGGCTTTCGGATCAGAGGGTCGTGGACAGATGCATTTaGACCGGATATCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LLIVQLLSICIRLSDQRVVDRCI*TGYLQN
Trigger: GTTCTGAAGATATCCGGTGCAAATGCATCTGTCCAC...GACCCTCTGATCCGAAAGCCGGATGCATATACTGAGCAACTGCACAATGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp AGGGATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCTCCTCCTCATTGTATAAGGTGGACAGATaGATTTGCACCGGATATCTT +
Preference number: 4 (lower is better)
Translates to: RDAAAAAIERASSFSSSLYKVDR*ICTGYL
Trigger: AAGATATCCGGTGCAAATGCATCTGTCCACCTTATA...CAATGAGGAGGAGAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp AGCGAGCATCCTCATTCTCCTCCTCATTGTGCAGTTGCTCAGTATATGCATCCGCAGTTGCTCAGTATATaGATCCGGCTTTCGGATCAG +
Preference number: 4 (lower is better)
Translates to: SEHPHSPPHCAVAQYMHPQLLSI*IRLSDQ
Trigger: CTGATCCGAAAGCCGGATGCATATACTGAGCAACTG...CGGATGCATATACTGAGCAACTGCACAATGAGGAGGAGAATGAGGATGCTCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGATTCTCCTCCTCATTGTaGAGTTGCTCAGTATATGCA +
Preference number: 4 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRFSSSL*SCSVYA
Trigger: TGCATATACTGAGCAACTGCACAATGAGGAGGAGAA...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCAAGACTGTCTTCCGCTaGTCCTGCACCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSKTVFR*SCTCSF
Trigger: GAAGCTGCAGGTGCAGGAGCAGCGGAAGACAGTCTT...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAACGGGAACTTTTGGGTaGGAGTCTGGGACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQTGTFG*ESGTPA
Trigger: AGCAGGGGTCCCAGACTCGCACCCAAAAGTTCCCGT...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR CCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGAGATGTTTCTATAAGGTaGACAGATGCATTTGCACCG +
Preference number: 4 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRDVSIR*TDAFAP
Trigger: CGGTGCAAATGCATCTGTCCACCTTATAGAAACATC...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp TGCCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGTATAAGGTGGACAGATaGATTTGCACCGGATATCTT +
Preference number: 4 (lower is better)
Translates to: CLPPPFNPKDPRRQQRSEYKVDR*ICTGYL
Trigger: AAGATATCCGGTGCAAATGCATCTGTCCACCTTATA...CTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGATATAAGGTGGACAGATaGATTTGCACCGGATATCTT +
Preference number: 4 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRYKVDR*ICTGYL
Trigger: AAGATATCCGGTGCAAATGCATCTGTCCACCTTATA...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp AAGACCCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAACAAGTACAGGGGCTGTaGTGTTCAGATCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: KTQEDNRDQRPHPSSLIKQVQGL*CSDPRS
Trigger: TGAGCGTGGATCTGAACACCACAGCCCCTGTACTTG...TTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCACAGACACTGAGTTCCTaGAGACCCAGCTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPQTLSS*RPSFIF
Trigger: GAAGATAAAGCTGGGTCTTCAGGAACTCAGTGTCTG...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAAGAAAGGAACACATGCTaGATGCTGGGCCATGCTTTC +
Preference number: 4 (lower is better)
Translates to: DKIFSPCTGTTKFRDKRQERNTC*MLGHAF
Trigger: GAAAGCATGGCCCAGCATTCAGCATGTGTTCCTTTC...TTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ATCCTCATTCTCCTCCTCATTGTGCAGTTGCTCAGTATATGCATCCGGCTTTCGAAGATAAGAGCTTCATaGTTATCAGGCTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ILILLLIVQLLSICIRLSKIRAS*LSGLLG
Trigger: GCCCAGCAAGCCTGATAAGCATGAAGCTCTTATCTT...CGAAAGCCGGATGCATATACTGAGCAACTGCACAATGAGGAGGAGAATGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR GCA 90 bp GGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCACAGTTGCTCAGTATATaGATCCGGCTTTCGGATCAG +
Preference number: 4 (lower is better)
Translates to: GQNFLSMHWYNEVQGQEAQLLSI*IRLSDQ
Trigger: CTGATCCGAAAGCCGGATGCATATACTGAGCAACTG...TGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCCAGACACTGAGTTCCTaGAGACCCAGCTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIAQTLSS*RPSFIF
Trigger: GAAGATAAAGCTGGGTCTTCAGGAACTCAGTGTCTG...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCAGTGGACAGATGCATTTaGACCGGATATCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPVDRCI*TGYLQN
Trigger: GTTCTGAAGATATCCGGTGCAAATGCATCTGTCCAC...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAATCCTCATTGTGCAGTTaGTCAGTATATGCATCCGGC +
Preference number: 4 (lower is better)
Translates to: DKIFSPCTGTTKFRDKRQSSLCS*SVYASG
Trigger: GCCGGATGCATATACTGAGCAACTGCACAATGAGGA...TTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAAAAGATAAGAGCTTCATaGTTATCAGGCTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DKIFSPCTGTTKFRDKRQKIRAS*LSGLLG
Trigger: GCCCAGCAAGCCTGATAAGCATGAAGCTCTTATCTT...TTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp GACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAAGTGGACAGATGCATTTaGACCGGATATCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: DKIFSPCTGTTKFRDKRQVDRCI*TGYLQN
Trigger: GTTCTGAAGATATCCGGTGCAAATGCATCTGTCCAC...TTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCGTGGACAGATGCATTTaGACCGGATATCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIAVDRCI*TGYLQN
Trigger: GTTCTGAAGATATCCGGTGCAAATGCATCTGTCCAC...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAACAGTTGCTCAGTATATaGATCCGGCTTTCGGATCAG +
Preference number: 4 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQQLLSI*IRLSDQ
Trigger: CTGATCCGAAAGCCGGATGCATATACTGAGCAACTG...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCTTTCTCTCCATGCACTaGTACAACGAAGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIAFLSMH*YNEVQG
Trigger: TCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAA...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCTTTCTCTCCATGCACTaGTACAACGAAGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSFLSMH*YNEVQG
Trigger: TCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAA...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp GACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAATGTAAATGTGCCCACTaGTGTTTCTATAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: DKIFSPCTGTTKFRDKRQCKCAH*CFYKVD
Trigger: GTCCACCTTATAGAAACATCAGTGGGCACATTTACA...TTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR TCA 90 bp AAGACCCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAATGTAAATGTGCCCACTaGTGTTTCTATAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: KTQEDNRDQRPHPSSLIKCKCAH*CFYKVD
Trigger: GTCCACCTTATAGAAACATCAGTGGGCACATTTACA...TTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGGGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAAAGATAAGAGCTTCATaGTTATCAGGCTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQKIRAS*LSGLLG
Trigger: GCCCAGCAAGCCTGATAAGCATGAAGCTCTTATCTT...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCTTCTCCTCCTCATTGTaGAGTTGCTCAGTATATGCA +
Preference number: 4 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIAFSSSL*SCSVYA
Trigger: TGCATATACTGAGCAACTGCACAATGAGGAGGAGAA...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR GCA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCAAAATTTTCTCTCCATaGACTGGTACAACGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSKIFSP*TGTTKF
Trigger: GAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTT...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS GCA 90 bp CCGCTCGGGCCCGACGGGAACTTTTGGGTGCGAGTCTGGGACCCCTaGTCCGACGGCGAAGGCCGGTGCCCACCACGCCCAGAGGTCTTA +
Preference number: 5 (lower is better)
Translates to: PLGPDGNFWVRVWDP*SDGEGRCPPRPEVL
Trigger: TAAGACCTCTGGGCGTGGTGGGCACCGGCCTTCGCCGTCGGAGCAGGGGTCCCAGACTCGCACCCAAAAGTTCCCGTCGGGCCCGAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000485839.6
ENST00000497582.5
CDS GCA 90 bp TGGGCTCCAGGATTCCAAGGCCTGCTAAACCTGGTCGCCAAACCCTaGTTCCCTCCCGCCCAACTCTCCGGCTCTCCGCCAGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: WAPGFQGLLNLVAKP*FPPAQLSGSPPATW
Trigger: CCAGGTGGCTGGCGGAGAGCCGGAGAGTTGGGCGGGAGGGAAGCAGGGTTTGGCGACCAGGTTTAGCAGGCCTTGGAATCCTGGAGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367330.6
ENST00000497582.5
CDS CCA 90 bp GGTGGGCTCATTGCTCCTGTGGAGAGCAAGACGGATGGGGCGCGCTaGCCCACTCATGGCATGCCCCTGAGCAGAGTGGCTAGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: GGLIAPVESKTDGAR*PTHGMPLSRVARAG
Trigger: ACCAGCCCTAGCCACTCTGCTCAGGGGCATGCCATGAGTGGGCCAGCGCGCCCCATCCGTCTTGCTCTCCACAGGAGCAATGAGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS CCA 90 bp AACCTGGGCTGGTGGGCTCATTGCTCCTGTGGAGAGCAAGACGGATaGGGCGCGCTGGCCCACTCATGGCATGCCCCTGAGCAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: NLGWWAHCSCGEQDG*GALAHSWHAPEQSG
Trigger: GCCACTCTGCTCAGGGGCATGCCATGAGTGGGCCAGCGCGCCCCATCCGTCTTGCTCTCCACAGGAGCAATGAGCCCACCAGCCCAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS-3UTR CAA 90 bp GTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTGGGGCCTTGCTCCAGGACTGTGTTaGCTCGGGGTCCCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: VAPCFVQPGSWQPWCWGLAPGLC*LGVPRG
Trigger: CCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGC...AAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp GGGCACCTTCCACACGCTCCAGGACTGTGTTTGCTCGGGGTCCCCCGAGGGATGCAAGTGGGAATGGGGTaGGGGGCTGGGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: GHLPHAPGLCLLGVPRGMQVGMG*GAGLQD
Trigger: ATCCTGGAGCCCAGCCCCCAACCCCATTCCCACTTG...CATCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAAGGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CAA 90 bp GTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTGGGGCCTTCATGGTGTTGGGGCCTaGACCCAACCACACCAGCCC +
Preference number: 5 (lower is better)
Translates to: VAPCFVQPGSWQPWCWGLHGVGA*TQPHQP
Trigger: GGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCATG...AAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS CCA 90 bp CGCACAGCAGGCAGTAGGCCTCCACGTCATGGCCAGGCACTGGCATaGGCTCCACCACGTGCAGGCAGTTGCAGTCCTTCTGGGATACAT +
Preference number: 5 (lower is better)
Translates to: RTAGSRPPRHGQALA*APPRAGSCSPSGIH
Trigger: ATGTATCCCAGAAGGACTGCAACTGCCTGCACGTGGTGGAGCCCATGCCAGTGCCTGGCCATGACGTGGAGGCCTACTGCCTGCTGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
ENST00000414605.2
ENST00000435310.5
ENST00000485839.6
ENST00000495205.1
ENST00000497582.5
CDS CCA 90 bp GCTAGGCCCTTAACCATCCGGCCAAGTGGGAATGGGGTTGGGGGCTaGGCTCCAGGATTCCAAGGCCTGCTAAACCTGGTCGCCAAACCC +
Preference number: 5 (lower is better)
Translates to: ARPLTIRPSGNGVGG*APGFQGLLNLVAKP
Trigger: GGGTTTGGCGACCAGGTTTAGCAGGCCTTGGAATCCTGGAGCCCAGCCCCCAACCCCATTCCCACTTGGCCGGATGGTTAAGGGCCTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367330.6
ENST00000497582.5
CDS CCA 90 bp GCCGGACACCTGGAAAAAGAGATACGGAGTCGGAGAAGGGGAAGGTaGCCACACCGCAGCCAGCACGCTAGGCCCTTAACCATCCGGCCA +
Preference number: 5 (lower is better)
Translates to: AGHLEKEIRSRRRGR*PHRSQHARPLTIRP
Trigger: TGGCCGGATGGTTAAGGGCCTAGCGTGCTGGCTGCGGTGTGGCCACCTTCCCCTTCTCCGACTCCGTATCTCTTTTTCCAGGTGTCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367330.6
ENST00000497582.5
CDS CCA 90 bp CGCACAGCAGGCAGTAGGCCTCCACGTCATGGCCAGGCACTGGCATaGGCTCCACCACGTGCAGGCAGTTGCTACAACAGAGAGAGACAG +
Preference number: 5 (lower is better)
Translates to: RTAGSRPPRHGQALA*APPRAGSCYNRERQ
Trigger: CTGTCTCTCTCTGTTGTAGCAACTGCCTGCACGTGGTGGAGCCCATGCCAGTGCCTGGCCATGACGTGGAGGCCTACTGCCTGCTGTGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455367.5
CDS-3UTR CAA 90 bp GCCCCAGTGCGAGAAGTGCACAGGGGACAGCGAACACCAGCTTCCAGTGCACCCTCATGCTTATCAGGCTaGCTGGGCCAGCAAAGCCGG +
Preference number: 5 (lower is better)
Translates to: APVREVHRGQRTPASSAPSCLSG*LGQQSR
Trigger: CCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGA...GGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACGCTCCAGGACTGTGTTaGCTCGGGGTCCCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHAPGLC*LGVPRG
Trigger: CCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGC...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp AGGGAAGGGAGAAGTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGCATGGTGTTGGGGCCTaGACCCAACCACACCAGCCC +
Preference number: 5 (lower is better)
Translates to: REGRSSPLLCPAWKLAAMHGVGA*TQPHQP
Trigger: GGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCATG...CATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCCCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGTCATGCTTATCAGGCTaGCTGGGCCAGCAAAGCCGG +
Preference number: 5 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPSCLSG*LGQQSR
Trigger: CCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGA...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp TGGGCACCTTCCACACGCTCCAGGACTGTGTTTGCTCGGGGTCCCCCGAGGGATTCTTCAGAACTCTTGTaGGCTTCAGCTGGGGGCACC +
Preference number: 5 (lower is better)
Translates to: WAPSTRSRTVFARGPPRDSSELL*ASAGGT
Trigger: GGTGCCCCCAGCTGAAGCCAACAAGAGTTCTGAAGA...ATCCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGCGTGTGGAAGGTGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CAA 90 bp TGGGGCCTTGACCCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGCCGATCCATGGTGTTGGGGCCTaGACCCAACCACACCAGCCC +
Preference number: 5 (lower is better)
Translates to: WGLDPTTPAHLAEHLVPIHGVGA*TQPHQP
Trigger: GGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCATG...GATCGGCACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGGGTCAAGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS TCA 90 bp TCCCCATGCCAGGAAGTTCCCTCCCGGCCAAACAGGGAGCAGCGGTaGCATCTGGCTCTGAATTTCAGGTCTCAGGCATCTGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: SPCQEVPSRPNREQR*HLALNFRSQASGPW
Trigger: CCAGGGACCAGATGCCTGAGACCTGAAATTCAGAGCCAGATGTCACCGCTGCTCCCTGTTTGGCCGGGAGGGAACTTCCTGGCATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472411.1
ENST00000495205.1
CDS CCA 90 bp GTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTaGGGCCTTGACCCAACCACACCAGCCCATCTAGCTGAGCATCTT +
Preference number: 5 (lower is better)
Translates to: VAPCFVQPGSWQPWC*GLDPTTPAHLAEHL
Trigger: AAGATGCTCAGCTAGATGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
ENST00000472411.1
ENST00000495205.1
CDS-3UTR CAA 90 bp ATCGCATCCACTCCTGAGGCCGCCTCGAATGTCTCCATTCCCTTCTGGCCTGCCTCATGCTTATCAGGCTaGCTGGGCCAGCAAAGCCGG +
Preference number: 5 (lower is better)
Translates to: IASTPEAASNVSIPFWPASCLSG*LGQQSR
Trigger: CCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGA...GGCAGGCCAGAAGGGAATGGAGACATTCGAGGCGGCCTCAGGAGTGGATGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp GAAGGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGTCTTCAGAACTCTTGTaGGCTTCAGCTGGGGGCACC +
Preference number: 5 (lower is better)
Translates to: EGGKSGARRDRSHPLLRPSSELL*ASAGGT
Trigger: GGTGCCCCCAGCTGAAGCCAACAAGAGTTCTGAAGA...CGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGAGCTCCAGGACTGTGTTaGCTCGGGGTCCCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRAPGLC*LGVPRG
Trigger: CCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGC...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp GTGTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCCGCAAAAGACCCAGTaGTCCCCGCCCTCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: VFRSTLSLESHVPTDRLAPQKTQ*SPPSPS
Trigger: GCTAGGAGAGGGCGGGGACAACTGGGTCTTTTGCGG...AGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367332.5
CDS-3UTR CAA 90 bp GACCCAACCACACCAGCCCATCTAGCTGAGCATCTTGTGCCGATCGAAGACTGTGCCCGACGGGAACTTTaGGGTGCGAGTCTGGGACCC +
Preference number: 5 (lower is better)
Translates to: DPTTPAHLAEHLVPIEDCARREL*GASLGP
Trigger: GGGTCCCAGACTCGCACCCAAAAGTTCCCGTCGGGC...ACAGTCTTCGATCGGCACAAGATGCTCAGCTAGATGGGCTGGTGTGGTTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS CCA 90 bp GACTTTCAAGCTGGGTGCCCCGCTCAGCCAATAGCCAAGTTCCACTaGACCAATGTCCCACCTGATTGGGGCACCGCGTTCACGCCTGTT +
Preference number: 5 (lower is better)
Translates to: DFQAGCPAQPIAKFH*TNVPPDWGTAFTPV
Trigger: AACAGGCGTGAACGCGGTGCCCCAATCAGGTGGGACATTGGTCCAGTGGAACTTGGCTATTGGCTGAGCGGGGCACCCAGCTTGAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS-3UTR CAA 90 bp GCCCCAGTGCGAGAAGTGCACAGGGGACAGCGAACACCAGCTTCCAGTGCACCCATATCTTCAGAACTCTaGTTGGCTTCAGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: APVREVHRGQRTPASSAPISSEL*LASAGG
Trigger: GCCCCCAGCTGAAGCCAACAAGAGTTCTGAAGATAT...GGGTGCACTGGAAGCTGGTGTTCGCTGTCCCCTGTGCACTTCTCGCACTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000367333.6
ENST00000367334.9
CDS GCA 90 bp GCACCAGCAAACACCCGACCACAGCCACCAAAGATAAGAGCTTCATaGTTATCAGGCTTGCTGGGCCAGCAAAGCCGGACACCACGCCCA +
Preference number: 5 (lower is better)
Translates to: APANTRPQPPKIRAS*LSGLLGQQSRTPRP
Trigger: TGGGCGTGGTGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGAAGCTCTTATCTTTGGTGGCTGTGGTCGGGTGTTTGCTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435310.5
CDS-3UTR CAA 90 bp GGCGGCAAGAGTGGAGCCAGGAGAGACAGATCGCATCCACTCCTGAGGCCGCCTGGTGGACAGATGCATTaGCACCGGATATCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: GGKSGARRDRSHPLLRPPGGQMH*HRISSE
Trigger: TTCTGAAGATATCCGGTGCAAATGCATCTGTCCACC...AGGCGGCCTCAGGAGTGGATGCGATCTGTCTCTCCTGGCTCCACTCTTGCCGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp TGCCTTCCCCCTCCCTTCAACCCCAAAGACCCAAGAAGACAACAGAGATCAGAGCAAGTGGGAATGGGGTaGGGGGCTGGGCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: CLPPPFNPKDPRRQQRSEQVGMG*GAGLQD
Trigger: ATCCTGGAGCCCAGCCCCCAACCCCATTCCCACTTG...CTCTGATCTCTGTTGTCTTCTTGGGTCTTTGGGGTTGAAGGGAGGGGGAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS TCA 90 bp GAAAGGGAGGGCCCTACTCCACAGAGGAAGCACTCTGTCCTAACTTaGGGGAGTCTGCACAGCAGGCATCACGACAGCAGGCAGATGACA +
Preference number: 5 (lower is better)
Translates to: EREGPTPQRKHSVLT*GSLHSRHHDSRQMT
Trigger: TGTCATCTGCCTGCTGTCGTGATGCCTGCTGTGCAGACTCCCTCAAGTTAGGACAGAGTGCTTCCTCTGTGGAGTAGGGCCCTCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS GCA 90 bp GCACCAGCAAACACCCGACCACAGCCACCAAAGATAAGAGCTTCATaGTTATCAGGCTTGCTGGGCCAGCAAAGCCGGACACCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: APANTRPQPPKIRAS*LSGLLGQQSRTPGE
Trigger: CTCACCAGGTGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGAAGCTCTTATCTTTGGTGGCTGTGGTCGGGTGTTTGCTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485839.6
CDS CCA 90 bp AGCTTCATGCTTATCAGGCTTGCTGGGCCAGCAAAGCCGGACACCTaGAAAAAGAGATACGGAGTCGGAGAAGGGGAAGGTGGCCACACC +
Preference number: 5 (lower is better)
Translates to: SFMLIRLAGPAKPDT*KKRYGVGEGEGGHT
Trigger: GGTGTGGCCACCTTCCCCTTCTCCGACTCCGTATCTCTTTTTCCAGGTGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367330.6
ENST00000497582.5
CDS-3UTR CAA 90 bp TCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGTGACTGTGGACACTCTTCAGAACTCTTGTaGGCTTCAGCTGGGGGCACC +
Preference number: 5 (lower is better)
Translates to: SASSLMFQPTVWLSDCGHSSELL*ASAGGT
Trigger: GGTGCCCCCAGCTGAAGCCAACAAGAGTTCTGAAGA...GTGTCCACAGTCACTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp ATTCTCCTCCTCATTGTGCAGTTGCTCAGTATATGCATCCGGCTTTCGGATCAGGCTCCAGGACTGTGTTaGCTCGGGGTCCCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: ILLLIVQLLSICIRLSDQAPGLC*LGVPRG
Trigger: CCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGC...CTGATCCGAAAGCCGGATGCATATACTGAGCAACTGCACAATGAGGAGGAGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS GCA 90 bp GCACCAGCAAACACCCGACCACAGCCACCAAAGATAAGAGCTTCATaGTTATCAGGCTTGCTGGGCCAGCAAAGCCGGACACCTACAAGC +
Preference number: 5 (lower is better)
Translates to: APANTRPQPPKIRAS*LSGLLGQQSRTPTS
Trigger: GCTTGTAGGTGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGAAGCTCTTATCTTTGGTGGCTGTGGTCGGGTGTTTGCTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367332.5
ENST00000367334.9
ENST00000414605.2
CDS CCA 90 bp AGTGACTCCTCAAGTGGTGCACTAAGAAAGGACTTGGAGGCAACGTaGGCTCAGAGGGAAAGCATGCCCAGAAAGGAAAGGGAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: SDSSSGALRKDLEAT*AQRESMPRKEREGP
Trigger: AGGGCCCTCCCTTTCCTTTCTGGGCATGCTTTCCCTCTGAGCCCACGTTGCCTCCAAGTCCTTTCTTAGTGCACCACTTGAGGAGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS-3UTR CAA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGATCATGCTTATCAGGCTaGCTGGGCCAGCAAAGCCGG +
Preference number: 5 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRSCLSG*LGQQSR
Trigger: CCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGA...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp GTGCAGGTGAGGGGACCGGCAGCAGAGTATGCATGGGCACTCCATGCCCCAGTGTCATTCTCCTCCTCATaGTGCAGTTGCTCAGTATAT +
Preference number: 5 (lower is better)
Translates to: VQVRGPAAEYAWALHAPVSFSSS*CSCSVY
Trigger: ATATACTGAGCAACTGCACAATGAGGAGGAGAATGA...CACTGGGGCATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp GGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAGCTCCAGGACTGTGTTaGCTCGGGGTCCCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GQNFLSMHWYNEVQGQEAAPGLC*LGVPRG
Trigger: CCCTCGGGGGACCCCGAGCAAACACAGTCCTGGAGC...TGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS TCA 90 bp CCCCGCTCAGCCAATAGCCAAGTTCCACTGGACCAATGTCCCACCTaGTTGGGGCACCGCGTTCACGCCTGTTTAAACAGGGCAAATAAT +
Preference number: 5 (lower is better)
Translates to: PRSANSQVPLDQCPT*LGHRVHACLNRANN
Trigger: ATTATTTGCCCTGTTTAAACAGGCGTGAACGCGGTGCCCCAATCAGGTGGGACATTGGTCCAGTGGAACTTGGCTATTGGCTGAGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS GCA 90 bp GCACCAGCAAACACCCGACCACAGCCACCAAAGATAAGAGCTTCATaGTTATCAGGCTTGCTGGGCCAGCAAAGCCGGACACCTCACATT +
Preference number: 5 (lower is better)
Translates to: APANTRPQPPKIRAS*LSGLLGQQSRTPHI
Trigger: AATGTGAGGTGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGAAGCTCTTATCTTTGGTGGCTGTGGTCGGGTGTTTGCTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367333.6
CDS GCA 90 bp GCGAGCATCCTCATTCTCCTCCTCATTGTGCAGTTGCTCAGTATATaGATCCGGCTTTCGGATCAGAGGGTCCACCAGCATCAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: ASILILLLIVQLLSI*IRLSDQRVHQHQEG
Trigger: GCCTTCCTGATGCTGGTGGACCCTCTGATCCGAAAGCCGGATGCATATACTGAGCAACTGCACAATGAGGAGGAGAATGAGGATGCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
ENST00000414605.2
ENST00000435310.5
ENST00000455367.5
ENST00000472411.1
ENST00000485839.6
ENST00000495205.1
ENST00000497582.5
CDS GCA 90 bp GCACCAGCAAACACCCGACCACAGCCACCAAAGATAAGAGCTTCATaGTTATCAGGCTTGCTGGGCCAGCAAAGCCGGACACCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: APANTRPQPPKIRAS*LSGLLGQQSRTPGK
Trigger: TTTTCCAGGTGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGAAGCTCTTATCTTTGGTGGCTGTGGTCGGGTGTTTGCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367330.6
ENST00000497582.5
CDS-3UTR CAA 90 bp TTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCAGATATCTTCAGAACTCTaGTTGGCTTCAGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: FRSTLSLESHVPTDRLAQISSEL*LASAGG
Trigger: GCCCCCAGCTGAAGCCAACAAGAGTTCTGAAGATAT...CTGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp AGGGAAGGGAGAAGTAGCCCCCTGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGTCATTCTCCTCCTCATaGTGCAGTTGCTCAGTATAT +
Preference number: 5 (lower is better)
Translates to: REGRSSPLLCPAWKLAAMSFSSS*CSCSVY
Trigger: ATATACTGAGCAACTGCACAATGAGGAGGAGAATGA...CATGGCTGCCAGCTTCCAGGCTGGACAAAGCAGGGGGCTACTTCTCCCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp GGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCACATGGTGTTGGGGCCTaGACCCAACCACACCAGCCC +
Preference number: 5 (lower is better)
Translates to: GQNFLSMHWYNEVQGQEAHGVGA*TQPHQP
Trigger: GGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCATG...TGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCGCCCGACGGGAACTTTaGGGTGCGAGTCTGGGACCC +
Preference number: 5 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSARREL*GASLGP
Trigger: GGGTCCCAGACTCGCACCCAAAAGTTCCCGTCGGGC...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367330.6
CDS-3UTR CAA 90 bp CATAGAGCGAGCATCCTCATTCTCCTCCTCATTGTGCAGTTGCTCAGTATATGCTCATGCTTATCAGGCTaGCTGGGCCAGCAAAGCCGG +
Preference number: 5 (lower is better)
Translates to: HRASILILLLIVQLLSICSCLSG*LGQQSR
Trigger: CCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGA...GCATATACTGAGCAACTGCACAATGAGGAGGAGAATGAGGATGCTCGCTCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CAA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCCATGGTGTTGGGGCCTaGACCCAACCACACCAGCCC +
Preference number: 5 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIAHGVGA*TQPHQP
Trigger: GGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCATG...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCCTCTCCCTCACCTTGTaGGCTTCAGCTGGGGGCACC +
Preference number: 5 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIALSLTL*ASAGGT
Trigger: GGTGCCCCCAGCTGAAGCCAACAAGGTGAGGGAGAG...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367332.5
CDS-3UTR CAA 90 bp CAACGAAGTTCAGGGACAAGAGGCAACCCAAGTACAGGGGCTGTGGTGTTCAGAGGTGGACAGATGCATTaGCACCGGATATCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: QRSSGTRGNPSTGAVVFRGGQMH*HRISSE
Trigger: TTCTGAAGATATCCGGTGCAAATGCATCTGTCCACC...TCTGAACACCACAGCCCCTGTACTTGGGTTGCCTCTTGTCCCTGAACTTCGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp GTTCAGATCCACGCTCAGCCTCGAGTCTCATGTTCCAACCGACCGTCTGGCTCATCATTCTCCTCCTCATaGTGCAGTTGCTCAGTATAT +
Preference number: 5 (lower is better)
Translates to: VQIHAQPRVSCSNRPSGSSFSSS*CSCSVY
Trigger: ATATACTGAGCAACTGCACAATGAGGAGGAGAATGA...TGAGCCAGACGGTCGGTTGGAACATGAGACTCGAGGCTGAGCGTGGATCTGAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp AAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGAGGCAACCCATCTTCAGAACTCTTGTaGGCTTCAGCTGGGGGCACC +
Preference number: 5 (lower is better)
Translates to: KFSLHALVQRSSGTRGNPSSELL*ASAGGT
Trigger: GGTGCCCCCAGCTGAAGCCAACAAGAGTTCTGAAGA...TGGGTTGCCTCTTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000367333.6
ENST00000367334.9
CDS-3UTR CAA 90 bp GGATGCAGCAGCTGCTGCCATAGAGCGAGCATCCTCATTCTCCTCCTCATTGTGTCATTCTCCTCCTCATaGTGCAGTTGCTCAGTATAT +
Preference number: 5 (lower is better)
Translates to: GCSSCCHRASILILLLIVSFSSS*CSCSVY
Trigger: ATATACTGAGCAACTGCACAATGAGGAGGAGAATGA...CACAATGAGGAGGAGAATGAGGATGCTCGCTCTATGGCAGCAGCTGCTGCATCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CAA 90 bp CATAGAGCGAGCATCCTCATTCTCCTCCTCATTGTGCAGTTGCTCAGTATATGCATATCTTCAGAACTCTaGTTGGCTTCAGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: HRASILILLLIVQLLSICISSEL*LASAGG
Trigger: GCCCCCAGCTGAAGCCAACAAGAGTTCTGAAGATAT...GCATATACTGAGCAACTGCACAATGAGGAGGAGAATGAGGATGCTCGCTCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CAA 90 bp ATCCTCATTCTCCTCCTCATTGTGCAGTTGCTCAGTATATGCATCCGGCTTTCGGGTGGACAGATGCATTaGCACCGGATATCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: ILILLLIVQLLSICIRLSGGQMH*HRISSE
Trigger: TTCTGAAGATATCCGGTGCAAATGCATCTGTCCACC...CGAAAGCCGGATGCATATACTGAGCAACTGCACAATGAGGAGGAGAATGAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497582.5
CDS-3UTR CAA 90 bp CCAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCATATCTTCAGAACTCTaGTTGGCTTCAGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: PRRQQRSETTSLFPNQNSISSEL*LASAGG
Trigger: GCCCCCAGCTGAAGCCAACAAGAGTTCTGAAGATAT...GCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000367333.6
ENST00000367334.9
CDS TCA 90 bp CAGGGCAGTCCTTCTGGGATACATTCTGGTTGTAAATGTGCCCACTaGTGTTTCTATAAGGTGGACAGATGCATTTGCACCGGATATCTT +
Preference number: 5 (lower is better)
Translates to: QGSPSGIHSGCKCAH*CFYKVDRCICTGYL
Trigger: AAGATATCCGGTGCAAATGCATCTGTCCACCTTATAGAAACATCAGTGGGCACATTTACAACCAGAATGTATCCCAGAAGGACTGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455367.5
CDS CCA 90 bp GGATACATTCTGGTTGTAAATGTGCCCACTGATGTTTCTATAAGGTaGACAGATGCATTTGCACCGGATATCTTCAGAACTCTCCCTCAC +
Preference number: 5 (lower is better)
Translates to: GYILVVNVPTDVSIR*TDAFAPDIFRTLPH
Trigger: GTGAGGGAGAGTTCTGAAGATATCCGGTGCAAATGCATCTGTCCACCTTATAGAAACATCAGTGGGCACATTTACAACCAGAATGTATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367332.5
CDS-3UTR CAA 90 bp ACAAGAGGACAAAATTTTCTCTCCATGCACTGGTACAACGAAGTTCAGGGACAAGGTGGACAGATGCATTaGCACCGGATATCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: TRGQNFLSMHWYNEVQGQGGQMH*HRISSE
Trigger: TTCTGAAGATATCCGGTGCAAATGCATCTGTCCACC...TTGTCCCTGAACTTCGTTGTACCAGTGCATGGAGAGAAAATTTTGTCCTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS TCA 90 bp AGTTGCAGTCCTTCTGGGATACATTCTGGTTGTAAATGTGCCCACTaGTGTTTCTATAAGGTGGACAGATGCATTTGCACCGGATATCTT +
Preference number: 5 (lower is better)
Translates to: SCSPSGIHSGCKCAH*CFYKVDRCICTGYL
Trigger: AAGATATCCGGTGCAAATGCATCTGTCCACCTTATAGAAACATCAGTGGGCACATTTACAACCAGAATGTATCCCAGAAGGACTGCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
ENST00000414605.2
ENST00000435310.5
ENST00000485839.6
ENST00000495205.1
ENST00000497582.5
CDS CCA 90 bp GGATACATTCTGGTTGTAAATGTGCCCACTGATGTTTCTATAAGGTaGACAGATGCATTTGCACCGGATATCTTCAGAACTCTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: GYILVVNVPTDVSIR*TDAFAPDIFRTLVG
Trigger: GCCAACAAGAGTTCTGAAGATATCCGGTGCAAATGCATCTGTCCACCTTATAGAAACATCAGTGGGCACATTTACAACCAGAATGTATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367330.6
ENST00000367333.6
ENST00000367334.9
ENST00000435310.5
ENST00000455367.5
ENST00000485839.6
ENST00000495205.1
ENST00000497582.5
CDS-3UTR CAA 90 bp CAAGAAGACAACAGAGATCAGAGACCACATCCCTCTTCCCTAATCAAAATAGCCTCATTCTCCTCCTCATaGTGCAGTTGCTCAGTATAT +
Preference number: 5 (lower is better)
Translates to: QEDNRDQRPHPSSLIKIASFSSS*CSCSVY
Trigger: ATATACTGAGCAACTGCACAATGAGGAGGAGAATGA...GGCTATTTTGATTAGGGAAGAGGGATGTGGTCTCTGATCTCTGTTGTCTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
CDS CCA 72 bp CCGCTCGGGCCCGACGGGAACTTTTGGGTGCGAGTCTaGGACCCCTGCTCCGACGGCGAAGGCCGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: PLGPDGNFWVRV*DPCSDGEGRCP
Trigger: TGGGCACCGGCCTTCGCCGTCGGAGCAGGGGTCCCAGACTCGCACCCAAAAGTTCCCGTCGGGCCCGAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000485839.6
ENST00000497582.5
CDS CAA 72 bp CCGCAGCTCCTCCCCGCTCGGGCCCGACGGGAACTTTaGGGTGCGAGTCTGGGACCCCTGCTCCGACGGCGA +
Preference number: 6 (lower is better)
Translates to: PQLLPARARREL*GASLGPLLRRR
Trigger: TCGCCGTCGGAGCAGGGGTCCCAGACTCGCACCCAAAAGTTCCCGTCGGGCCCGAGCGGGGAGGAGCTGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000485839.6
ENST00000497582.5
CDS GCA 72 bp CGAGTCTGGGACCCCTGCTCCGACGGCGAAGGCCGGTaGCCACCACGCCCAGAGGTCTTAAGCCGGACTGGG +
Preference number: 6 (lower is better)
Translates to: RVWDPCSDGEGR*PPRPEVLSRTG
Trigger: CCCAGTCCGGCTTAAGACCTCTGGGCGTGGTGGGCACCGGCCTTCGCCGTCGGAGCAGGGGTCCCAGACTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000485839.6
ENST00000497582.5
CDS GCA 72 bp CCCGACGGGAACTTTTGGGTGCGAGTCTGGGACCCCTaGTCCGACGGCGAAGGCCGGTGCCCACCACGCCCA +
Preference number: 6 (lower is better)
Translates to: PDGNFWVRVWDP*SDGEGRCPPRP
Trigger: TGGGCGTGGTGGGCACCGGCCTTCGCCGTCGGAGCAGGGGTCCCAGACTCGCACCCAAAAGTTCCCGTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367330.6
ENST00000485839.6
ENST00000497582.5
CDS TCA 72 bp CGGATGGGGCGCGCTGGCCCACTCATGGCATGCCCCTaGGCAGAGTGGCTAGGGCTGGTAAGAAGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: RMGRAGPLMACP*AEWLGLVRRCV
Trigger: CACACACCTTCTTACCAGCCCTAGCCACTCTGCTCAGGGGCATGCCATGAGTGGGCCAGCGCGCCCCATCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS CCA 72 bp TGGTGGGCTCATTGCTCCTGTGGAGAGCAAGACGGATaGGGCGCGCTGGCCCACTCATGGCATGCCCCTGAG +
Preference number: 6 (lower is better)
Translates to: WWAHCSCGEQDG*GALAHSWHAPE
Trigger: CTCAGGGGCATGCCATGAGTGGGCCAGCGCGCCCCATCCGTCTTGCTCTCCACAGGAGCAATGAGCCCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS GCA 72 bp GGATTCCAAGGCCTGCTAAACCTGGTCGCCAAACCCTaGTTCCCTCCCGCCCAACTCTCCGGCTCTCCGCCA +
Preference number: 6 (lower is better)
Translates to: GFQGLLNLVAKP*FPPAQLSGSPP
Trigger: TGGCGGAGAGCCGGAGAGTTGGGCGGGAGGGAAGCAGGGTTTGGCGACCAGGTTTAGCAGGCCTTGGAATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367330.6
ENST00000497582.5
CDS GCA 72 bp ACAGGGTGGCCGTGCACTGTGGTCGTGACCAGGTGCTaGAGGCTCACCTCCCTCACCTTGTTGGCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: TGWPCTVVVTRC*RLTSLTLLASA
Trigger: AGCTGAAGCCAACAAGGTGAGGGAGGTGAGCCTGCAGCACCTGGTCACGACCACAGTGCACGGCCACCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414605.2
CDS CCA 72 bp CTGCAGGCTCACCTCCCTCACCTTGTTGGCTTCAGCTaGGGGCACCAGCAAACACCCGACCACAGCCACCAA +
Preference number: 6 (lower is better)
Translates to: LQAHLPHLVGFS*GHQQTPDHSHQ
Trigger: TTGGTGGCTGTGGTCGGGTGTTTGCTGGTGCCCCCAGCTGAAGCCAACAAGGTGAGGGAGGTGAGCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414605.2
CDS CCA 72 bp GCTGGGTGCCCCGCTCAGCCAATAGCCAAGTTCCACTaGACCAATGTCCCACCTGATTGGGGCACCGCGTTC +
Preference number: 6 (lower is better)
Translates to: AGCPAQPIAKFH*TNVPPDWGTAF
Trigger: GAACGCGGTGCCCCAATCAGGTGGGACATTGGTCCAGTGGAACTTGGCTATTGGCTGAGCGGGGCACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS TCA 72 bp CCCGGCCAAACAGGGAGCAGCGGTGACATCTGGCTCTaGATTTCAGGTCTCAGGCATCTGGTCCCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: PGQTGSSGDIWL*ISGLRHLVPGG
Trigger: CCCTCCAGGGACCAGATGCCTGAGACCTGAAATTCAGAGCCAGATGTCACCGCTGCTCCCTGTTTGGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472411.1
ENST00000495205.1
CDS GCA 72 bp ACGTCATGGCCAGGCACTGGCATGGGCTCCACCACGTaGAGGCAGTTGCTACAACAGAGAGAGACAGGGCAG +
Preference number: 6 (lower is better)
Translates to: TSWPGTGMGSTT*RQLLQQRETGQ
Trigger: CTGCCCTGTCTCTCTCTGTTGTAGCAACTGCCTGCACGTGGTGGAGCCCATGCCAGTGCCTGGCCATGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455367.5
CDS CCA 72 bp TTGCAGGAGGGGCTGCCTCAGGTGGATGAAAGGAGTTaGGTCTGCACAGGGCACTGGCTGGGAGTGAAGGAC +
Preference number: 6 (lower is better)
Translates to: LQEGLPQVDERS*VCTGHWLGVKD
Trigger: GTCCTTCACTCCCAGCCAGTGCCCTGTGCAGACCCAACTCCTTTCATCCACCTGAGGCAGCCCCTCCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS CCA 72 bp AAAAGTAAACCTGGGCTGGTGGGCTCATTGCTCCTGTaGAGAGCAAGACGGATGGGGCGCGCTGGCCCACTC +
Preference number: 6 (lower is better)
Translates to: KSKPGLVGSLLL*RARRMGRAGPL
Trigger: GAGTGGGCCAGCGCGCCCCATCCGTCTTGCTCTCCACAGGAGCAATGAGCCCACCAGCCCAGGTTTACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS GCA 72 bp ACGTCATGGCCAGGCACTGGCATGGGCTCCACCACGTaGAGGCAGTTGCAGTCCTTCTGGGATACATTCTGG +
Preference number: 6 (lower is better)
Translates to: TSWPGTGMGSTT*RQLQSFWDTFW
Trigger: CCAGAATGTATCCCAGAAGGACTGCAACTGCCTGCACGTGGTGGAGCCCATGCCAGTGCCTGGCCATGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
ENST00000414605.2
ENST00000435310.5
ENST00000485839.6
ENST00000495205.1
ENST00000497582.5
CDS CCA 72 bp TGCTTTGTCCAGCCTGGAAGCTGGCAGCCATGGTGTTaGGGCCTTGACCCAACCACACCAGCCCATCTAGCT +
Preference number: 6 (lower is better)
Translates to: CFVQPGSWQPWC*GLDPTTPAHLA
Trigger: AGCTAGATGGGCTGGTGTGGTTGGGTCAAGGCCCCAACACCATGGCTGCCAGCTTCCAGGCTGGACAAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
ENST00000472411.1
ENST00000495205.1
CDS CCA 72 bp CTGGAAAAAGAGATACGGAGTCGGAGAAGGGGAAGGTaGCCACACCGCAGCCAGCACGCTAGGCCCTTAACC +
Preference number: 6 (lower is better)
Translates to: LEKEIRSRRRGR*PHRSQHARPLT
Trigger: GGTTAAGGGCCTAGCGTGCTGGCTGCGGTGTGGCCACCTTCCCCTTCTCCGACTCCGTATCTCTTTTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367330.6
ENST00000497582.5
CDS CAA 90 bp GGAAAGGGAGGGCCCTACTCCACAGAGGAAGCACTCTGTCCTAACTaGAGGGAGTCTGCACAGCAGGCATCACGACAGCAGGCAGATGAC +
Preference number: 6 (lower is better)
Translates to: GKGGPYSTEEALCPN*RESAQQASRQQADD
Trigger: GTCATCTGCCTGCTGTCGTGATGCCTGCTGTGCAGACTCCCTCAAGTTAGGACAGAGTGCTTCCTCTGTGGAGTAGGGCCCTCCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS CCA 72 bp GGAAAGCTGGGGCCAGGAAAAGTAAACCTGGGCTGGTaGGCTCATTGCTCCTGTGGAGAGCAAGACGGATGG +
Preference number: 6 (lower is better)
Translates to: GKLGPGKVNLGW*AHCSCGEQDGW
Trigger: CCATCCGTCTTGCTCTCCACAGGAGCAATGAGCCCACCAGCCCAGGTTTACTTTTCCTGGCCCCAGCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS CCA 72 bp GCTGGAAAGCTGGGGCCAGGAAAAGTAAACCTGGGCTaGTGGGCTCATTGCTCCTGTGGAGAGCAAGACGGA +
Preference number: 6 (lower is better)
Translates to: AGKLGPGKVNLG*WAHCSCGEQDG
Trigger: TCCGTCTTGCTCTCCACAGGAGCAATGAGCCCACCAGCCCAGGTTTACTTTTCCTGGCCCCAGCTTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS CAA 90 bp CGGCGTGCCTATGAACCATTATCTGAGGCCAGGGCTAGAAATCCGTaGCTAGTCTTGGGCCATCTGTGTCCGGCTGGCAGTGACTCCTCA +
Preference number: 6 (lower is better)
Translates to: RRAYEPLSEARARNP*LVLGHLCPAGSDSS
Trigger: TGAGGAGTCACTGCCAGCCGGACACAGATGGCCCAAGACTAGCAACGGATTTCTAGCCCTGGCCTCAGATAATGGTTCATAGGCACGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS GCA 72 bp CGAGGGATTAGGAAGTTGTATCTGATGAGGTCCCCATaGCAGGAAGTTCCCTCCCGGCCAAACAGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: RGIRKLYLMRSP*QEVPSRPNREQ
Trigger: CTGCTCCCTGTTTGGCCGGGAGGGAACTTCCTGGCATGGGGACCTCATCAGATACAACTTCCTAATCCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472411.1
ENST00000495205.1
CDS CCA 72 bp GCACCGGATATCTTCAGAACTCTTGTTGGCTTCAGCTaGGGGCACCAGCAAACACCCGACCACAGCCACCAA +
Preference number: 6 (lower is better)
Translates to: APDIFRTLVGFS*GHQQTPDHSHQ
Trigger: TTGGTGGCTGTGGTCGGGTGTTTGCTGGTGCCCCCAGCTGAAGCCAACAAGAGTTCTGAAGATATCCGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367330.6
ENST00000367333.6
ENST00000367334.9
ENST00000435310.5
ENST00000455367.5
ENST00000485839.6
ENST00000495205.1
ENST00000497582.5
CDS CCA 72 bp ATCTTCAGAACTCTCCCTCACCTTGTTGGCTTCAGCTaGGGGCACCAGCAAACACCCGACCACAGCCACCAA +
Preference number: 6 (lower is better)
Translates to: IFRTLPHLVGFS*GHQQTPDHSHQ
Trigger: TTGGTGGCTGTGGTCGGGTGTTTGCTGGTGCCCCCAGCTGAAGCCAACAAGGTGAGGGAGAGTTCTGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367332.5
CDS CCA 72 bp TGCACCGGATATCTTCAGAACTCTCCCTCACCTTGTTaGCTTCAGCTGGGGGCACCAGCAAACACCCGACCA +
Preference number: 6 (lower is better)
Translates to: CTGYLQNSPSPC*LQLGAPANTRP
Trigger: TGGTCGGGTGTTTGCTGGTGCCCCCAGCTGAAGCCAACAAGGTGAGGGAGAGTTCTGAAGATATCCGGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367332.5
CDS CAA 72 bp GGCAGTGACTCCTCAAGTGGTGCACTAAGAAAGGACTaGGAGGCAACGTGGGCTCAGAGGGAAAGCATGCCC +
Preference number: 6 (lower is better)
Translates to: GSDSSSGALRKD*EATWAQRESMP
Trigger: GGGCATGCTTTCCCTCTGAGCCCACGTTGCCTCCAAGTCCTTTCTTAGTGCACCACTTGAGGAGTCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS TCA 72 bp GCCAATAGCCAAGTTCCACTGGACCAATGTCCCACCTaGTTGGGGCACCGCGTTCACGCCTGTTTAAACAGG +
Preference number: 6 (lower is better)
Translates to: ANSQVPLDQCPT*LGHRVHACLNR
Trigger: CCTGTTTAAACAGGCGTGAACGCGGTGCCCCAATCAGGTGGGACATTGGTCCAGTGGAACTTGGCTATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS GCA 72 bp AACACCCGACCACAGCCACCAAAGATAAGAGCTTCATaGTTATCAGGCTTGCTGGGCCAGCAAAGCCGGACA +
Preference number: 6 (lower is better)
Translates to: NTRPQPPKIRAS*LSGLLGQQSRT
Trigger: TGTCCGGCTTTGCTGGCCCAGCAAGCCTGATAAGCATGAAGCTCTTATCTTTGGTGGCTGTGGTCGGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
ENST00000414605.2
ENST00000435310.5
ENST00000485839.6
ENST00000495205.1
ENST00000497582.5
CDS CAA 72 bp GTAGGAGGACTGGGGGAAACACGAGGGATTAGGAAGTaGTATCTGATGAGGTCCCCATGCCAGGAAGTTCCC +
Preference number: 6 (lower is better)
Translates to: VGGLGETRGIRK*YLMRSPCQEVP
Trigger: GGGAACTTCCTGGCATGGGGACCTCATCAGATACAACTTCCTAATCCCTCGTGTTTCCCCCAGTCCTCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472411.1
ENST00000495205.1
CDS CCA 72 bp TCAAGTGGTGCACTAAGAAAGGACTTGGAGGCAACGTaGGCTCAGAGGGAAAGCATGCCCAGAAAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: SSGALRKDLEAT*AQRESMPRKER
Trigger: CCTTTCCTTTCTGGGCATGCTTTCCCTCTGAGCCCACGTTGCCTCCAAGTCCTTTCTTAGTGCACCACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS CAA 72 bp TATGAACCATTATCTGAGGCCAGGGCTAGAAATCCGTaGCTAGTCTTGGGCCATCTGTGTCCGGCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: YEPLSEARARNP*LVLGHLCPAGS
Trigger: ACTGCCAGCCGGACACAGATGGCCCAAGACTAGCAACGGATTTCTAGCCCTGGCCTCAGATAATGGTTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS GCA 72 bp CTCATTCTCCTCCTCATTGTGCAGTTGCTCAGTATATaGATCCGGCTTTCGGATCAGAGGGTCCACCAGCAT +
Preference number: 6 (lower is better)
Translates to: LILLLIVQLLSI*IRLSDQRVHQH
Trigger: ATGCTGGTGGACCCTCTGATCCGAAAGCCGGATGCATATACTGAGCAACTGCACAATGAGGAGGAGAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
ENST00000414605.2
ENST00000435310.5
ENST00000455367.5
ENST00000472411.1
ENST00000485839.6
ENST00000495205.1
ENST00000497582.5
CDS CAA 90 bp GATCCCAAGGCTACCAGATGGTGGAGGTGTGACTCAAACCCAGACTaGCTGACTCCCTCTCAAATGCTTTTCCTAATTCCACAATGCCTG +
Preference number: 6 (lower is better)
Translates to: DPKATRWWRCDSNPD*LTPSQMLFLIPQCL
Trigger: CAGGCATTGTGGAATTAGGAAAAGCATTTGAGAGGGAGTCAGCAAGTCTGGGTTTGAGTCACACCTCCACCATCTGGTAGCCTTGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472411.1
CDS TCA 72 bp CCTTCTGGGATACATTCTGGTTGTAAATGTGCCCACTaGTGTTTCTATAAGGTGGACAGATGCATTTGCACC +
Preference number: 6 (lower is better)
Translates to: PSGIHSGCKCAH*CFYKVDRCICT
Trigger: GGTGCAAATGCATCTGTCCACCTTATAGAAACATCAGTGGGCACATTTACAACCAGAATGTATCCCAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000367330.6
ENST00000367332.5
ENST00000367333.6
ENST00000367334.9
ENST00000414605.2
ENST00000435310.5
ENST00000455367.5
ENST00000485839.6
ENST00000495205.1
ENST00000497582.5
CDS CAA 72 bp ATGGTCCCTGTAACAGTGTTGGTAATACACCTGTTATaGGGACCACAAAAGCACCTTCACCCACCTCTAAAT +
Preference number: 6 (lower is better)
Translates to: MVPVTVLVIHLL*GPQKHLHPPLN
Trigger: ATTTAGAGGTGGGTGAAGGTGCTTTTGTGGTCCCAATAACAGGTGTATTACCAACACTGTTACAGGGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472411.1