RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM8B (Homo sapiens)

Ensembl gene IDs: ENSG00000137103

Ensembl transcript IDs: ENST00000377988.6, ENST00000377991.9, ENST00000377996.5, ENST00000439587.6, ENST00000464519.6, ENST00000473947.1, ENST00000490199.2, ENST00000643932.2, ENST00000650015.1

Found 1564 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCTGGCCTTTCCCGAGGAGAAGTGAGAGCAGCTCTGCATGGCGATaGAGGTCACCTGGGAGAGACCACAGCCTCGCCCACCGCTCCCTT +
Preference number: 1 (lower is better)
Translates to: RWPFPRRSESSSAWR*RSPGRDHSLAHRSL
Trigger: AAGGGAGCGGTGGGCGAGGCTGTGGTCTCTCCCAGGTGACCTCCATCGCCATGCAGAGCTGCTCTCACTTCTCCTCGGGAAAGGCCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp CATGAGGGATGCGGTGGAGGCAAGGCAGGAGGACGGGCCAGAGCCTaGACACACAAAAGCCCTCAAATGCCTCCGCCAGGCCCACTTGGT +
Preference number: 1 (lower is better)
Translates to: HEGCGGGKAGGRARA*THKSPQMPPPGPLG
Trigger: ACCAAGTGGGCCTGGCGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTTGCCTCCACCGCATCCCTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp GACCACAGCCTCGCCCACCGCTCCCTTTGCAAAGCTGGTCACAACTaGCCGCACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGT +
Preference number: 1 (lower is better)
Translates to: DHSLAHRSLCKAGHN*PHLHQIRAWLPSSC
Trigger: ACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGTGCGGTCAGTTGTGACCAGCTTTGCAAAGGGAGCGGTGGGCGAGGCTGTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp ACCTGGGAGAGACCACAGCCTCGCCCACCGCTCCCTTTGCAAAGCTaGTCACAACTGACCGCACCTCCACCAGATTCGTGCCTGGCTTCC +
Preference number: 1 (lower is better)
Translates to: TWERPQPRPPLPLQS*SQLTAPPPDSCLAS
Trigger: GGAAGCCAGGCACGAATCTGGTGGAGGTGCGGTCAGTTGTGACCAGCTTTGCAAAGGGAGCGGTGGGCGAGGCTGTGGTCTCTCCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp GCAGCAAGAGCCTCCAGTGTGTCCTTCCCCAGCCATAACAACTGGTaGCGTCCCACAGGGTGGAGCCTCCATCTGCCAGGGGCTCTGAGA +
Preference number: 1 (lower is better)
Translates to: AARASSVSFPSHNNW*RPTGWSLHLPGALR
Trigger: TCTCAGAGCCCCTGGCAGATGGAGGCTCCACCCTGTGGGACGTCACCAGTTGTTATGGCTGGGGAAGGACACACTGGAGGCTCTTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp CTGGAGACAGGCCTGGTTCAGCGGCTACGTCCAGCACTGTCATATTaGTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTG +
Preference number: 1 (lower is better)
Translates to: LETGLVQRLRPALSY*WPPSLRESHMHLKL
Trigger: CAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGCAATATGACAGTGCTGGACGTAGCCGCTGAACCAGGCCTGTCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp GCAGACCTGCATGCAGATGGCAGCGCTGAGCTGGGGGACAGGCTTTaGCAACTCACTGCTACAGTCCATCCTTGTCTGGCACCTCCCCTT +
Preference number: 1 (lower is better)
Translates to: ADLHADGSAELGDRL*QLTATVHPCLAPPL
Trigger: AAGGGGAGGTGCCAGACAAGGATGGACTGTAGCAGTGAGTTGGCAAAGCCTGTCCCCCAGCTCAGCGCTGCCATCTGCATGCAGGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp CTGCAATCCCTCCTCCACAGCACAGCACAGCCCAGACGCTGCCTCTaGGAAGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAAT +
Preference number: 1 (lower is better)
Translates to: LQSLLHSTAQPRRCL*EGSLRPELLSLWEN
Trigger: ATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCTTCCCAGAGGCAGCGTCTGGGCTGTGCTGTGCTGTGGAGGAGGGATTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR CCA 90 bp GAGACAGGCCTGGTTCAGCGGCTACGTCCAGCACTGTCATATTGCTaGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCC +
Preference number: 1 (lower is better)
Translates to: ETGLVQRLRPALSYC*PPSLRESHMHLKLS
Trigger: GGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGCAATATGACAGTGCTGGACGTAGCCGCTGAACCAGGCCTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp CTGTCCAGTCCCCACCAGGTCACCTCCTTCCACTGTGCTGAGTGCTaGGCCAAGTGCAAGCTCCATGGCAAAGGTGACAGCTTCTCCTGC +
Preference number: 1 (lower is better)
Translates to: LSSPHQVTSFHCAEC*AKCKLHGKGDSFSC
Trigger: GCAGGAGAAGCTGTCACCTTTGCCATGGAGCTTGCACTTGGCCCAGCACTCAGCACAGTGGAAGGAGGTGACCTGGTGGGGACTGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp TCCTTCTGGGCAGGTGGTAGGATGCCGCAGGGCCAGTGGGCTGTGTaGAGATATGACAAATGTCTCCTGTGGCTCAGAGCAGCAAGAGCC +
Preference number: 1 (lower is better)
Translates to: SFWAGGRMPQGQWAV*RYDKCLLWLRAARA
Trigger: GGCTCTTGCTGCTCTGAGCCACAGGAGACATTTGTCATATCTGCACACAGCCCACTGGCCCTGCGGCATCCTACCACCTGCCCAGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp GTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCTTaGGAAGGCTCTGCATCCCAGGAAAGGCTCCACACCTGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: VLLTGLCLPGKESMS*EGSASQERLHTCRR
Trigger: CCTCCTGCAGGTGTGGAGCCTTTCCTGGGATGCAGAGCCTTCCCAAGACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR CCA 90 bp GAGCTCATGAGTGGGCAGACCTGCATGCAGATGGCAGCGCTGAGCTaGGGGACAGGCTTTGCCAACTCACTGCTACAGTCCATCCTTGTC +
Preference number: 1 (lower is better)
Translates to: ELMSGQTCMQMAALS*GTGFANSLLQSILV
Trigger: GACAAGGATGGACTGTAGCAGTGAGTTGGCAAAGCCTGTCCCCCAGCTCAGCGCTGCCATCTGCATGCAGGTCTGCCCACTCATGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp CCGCAGGGCCAGTGGGCTGTGTGCAGATATGACAAATGTCTCCTGTaGCTCAGAGCAGCAAGAGCCTCCAGTGTGTCCTTCCCCAGCCAT +
Preference number: 1 (lower is better)
Translates to: PQGQWAVCRYDKCLL*LRAARASSVSFPSH
Trigger: ATGGCTGGGGAAGGACACACTGGAGGCTCTTGCTGCTCTGAGCCACAGGAGACATTTGTCATATCTGCACACAGCCCACTGGCCCTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp CATCCCAGGAAAGGCTCCACACCTGCAGGAGGGACTCCTTGGTCCTaGGGGACTCTGTGCCTGCATAGGCTCCAGTCCTTAAGAAGGACT +
Preference number: 1 (lower is better)
Translates to: HPRKGSTPAGGTPWS*GTLCLHRLQSLRRT
Trigger: AGTCCTTCTTAAGGACTGGAGCCTATGCAGGCACAGAGTCCCTCAGGACCAAGGAGTCCCTCCTGCAGGTGTGGAGCCTTTCCTGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR GCA 90 bp GGGCTACACGAGCACTGTAACCTGGAGGTGGTCCTGTTTGTGTTCTaGCTGGGCATCTACTCCGTGAATGTGTTGGGGAACGCCCTCCTC +
Preference number: 1 (lower is better)
Translates to: GLHEHCNLEVVLFVF*LGIYSVNVLGNALL
Trigger: GAGGAGGGCGTTCCCCAACACATTCACGGAGTAGATGCCCAGGCAGAACACAAACAGGACCACCTCCAGGTTACAGTGCTCGTGTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp TTCATGGCCCAAGGAACACTAGGTGAGCATCATCCATTACCCACCTaGCTTCCGGAGCTCATCTCACCTGACTCAGGGAGTGGGGCAGCG +
Preference number: 1 (lower is better)
Translates to: FMAQGTLGEHHPLPT*LPELISPDSGSGAA
Trigger: CGCTGCCCCACTCCCTGAGTCAGGTGAGATGAGCTCCGGAAGGCAGGTGGGTAATGGATGATGCTCACCTAGTGTTCCTTGGGCCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp CAGCCAGGAGGCAAAGCTGGGTTTTGGAGTCGTGCATTCGCTATCTaGTGGGTGCCTGCTATTGGCAGCACTTGCTGCATGAGGTGCTGG +
Preference number: 1 (lower is better)
Translates to: QPGGKAGFWSRAFAI*WVPAIGSTCCMRCW
Trigger: CCAGCACCTCATGCAGCAAGTGCTGCCAATAGCAGGCACCCAGCAGATAGCGAATGCACGACTCCAAAACCCAGCTTTGCCTCCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp GATGGGCGGGAGGACACGCCTCCATCTCGGACAAAGGTGCGGAGCTaGGAAAAGAGATGGTTTCTTCAGGAAAGGGTGAGCCCTGCAACT +
Preference number: 1 (lower is better)
Translates to: DGREDTPPSRTKVRS*EKRWFLQERVSPAT
Trigger: AGTTGCAGGGCTCACCCTTTCCTGAAGAAACCATCTCTTTTCCCAGCTCCGCACCTTTGTCCGAGATGGAGGCGTGTCCTCCCGCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp GACTACTGTTCTCTGGACACACCTGGGCTTCCTCCTAGGAATACCTaGCGCTGGCCTTTCCCGAGGAGAAGTGAGAGCAGCTCTGCATGG +
Preference number: 1 (lower is better)
Translates to: DYCSLDTPGLPPRNT*RWPFPRRSESSSAW
Trigger: CCATGCAGAGCTGCTCTCACTTCTCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCAGAGAACAGTAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp GCCGGGCTTATGGGCCTGGAGCCTATGGCATCCAAGGCGCAGAACTaGAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCTCCT +
Preference number: 1 (lower is better)
Translates to: AGLMGLEPMASKAQN*NVTQYSDSLSTLSP
Trigger: AGGAGAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTGGATGCCATAGGCTCCAGGCCCATAAGCCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp AGGAGACAACCAAGGATTCCCATTTTGGGAGCCTGGAGACAGGCCTaGTTCAGCGGCTACGTCCAGCACTGTCATATTGCTGGCCCCCTT +
Preference number: 1 (lower is better)
Translates to: RRQPRIPILGAWRQA*FSGYVQHCHIAGPL
Trigger: AAGGGGGCCAGCAATATGACAGTGCTGGACGTAGCCGCTGAACCAGGCCTGTCTCCAGGCTCCCAAAATGGGAATCCTTGGTTGTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp ATTGTTAACAAGTGGAAGAGCTGGGGCTTGGACCCTAGTCCCGTCTaGCTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAG +
Preference number: 1 (lower is better)
Translates to: IVNKWKSWGLDPSPV*LQGHPHLLCHTARK
Trigger: CTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGACTAGGGTCCAAGCCCCAGCTCTTCCACTTGTTAACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp TGCTGGGCCAAGTGCAAGCTCCATGGCAAAGGTGACAGCTTCTCCTaGAGGTCACCAGTCACTGAGATTGAAGGCATAAGAGCCAGGCAC +
Preference number: 1 (lower is better)
Translates to: CWAKCKLHGKGDSFS*RSPVTEIEGIRARH
Trigger: GTGCCTGGCTCTTATGCCTTCAATCTCAGTGACTGGTGACCTGCAGGAGAAGCTGTCACCTTTGCCATGGAGCTTGCACTTGGCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp GAAGGAGGCAGAGTCCTGCTCTTAAGGTGTAGTAGAGAAGACAGGTaGACCACAGCGCACAATGACACAGAGGGATGGCCAAGGGCAGTG +
Preference number: 1 (lower is better)
Translates to: EGGRVLLLRCSREDR*TTAHNDTEGWPRAV
Trigger: CACTGCCCTTGGCCATCCCTCTGTGTCATTGTGCGCTGTGGTGCACCTGTCTTCTCTACTACACCTTAAGAGCAGGACTCTGCCTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp CAAAGCTGGGTTTTGGAGTCGTGCATTCGCTATCTGCTGGGTGCCTaGTATTGGCAGCACTTGCTGCATGAGGTGCTGGTAGGAAGGAGG +
Preference number: 1 (lower is better)
Translates to: QSWVLESCIRYLLGA*YWQHLLHEVLVGRR
Trigger: CCTCCTTCCTACCAGCACCTCATGCAGCAAGTGCTGCCAATAGCAGGCACCCAGCAGATAGCGAATGCACGACTCCAAAACCCAGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp CTTCACCACCGTGTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTaGCTCATCTCTGTAGCTCCCACAGCATGTTCCCTATGGAAGGTT +
Preference number: 1 (lower is better)
Translates to: LHHRVSSFRAGFSRV*LISVAPTACSLWKV
Trigger: AACCTTCCATAGGGAACATGCTGTGGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCACACGGTGGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp TGGGTTTTGGAGTCGTGCATTCGCTATCTGCTGGGTGCCTGCTATTaGCAGCACTTGCTGCATGAGGTGCTGGTAGGAAGGAGGCAGAGT +
Preference number: 1 (lower is better)
Translates to: WVLESCIRYLLGACY*QHLLHEVLVGRRQS
Trigger: ACTCTGCCTCCTTCCTACCAGCACCTCATGCAGCAAGTGCTGCCAATAGCAGGCACCCAGCAGATAGCGAATGCACGACTCCAAAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp TGCACCCCAGCTCCGTCTCCCACTTCAGAGCCTTCTGTACTCTGCTaGCTCTGTCCAGAATCCCAGCTATTTGGGTTCAAGCATCCCAGT +
Preference number: 1 (lower is better)
Translates to: CTPAPSPTSEPSVLC*LCPESQLFGFKHPS
Trigger: ACTGGGATGCTTGAACCCAAATAGCTGGGATTCTGGACAGAGTCAGCAGAGTACAGAAGGCTCTGAAGTGGGAGACGGAGCTGGGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp TGCTTACCTCCACCACCCCACTCCACACACAAAAGCATGCGCACATaGACTGGCCCAGGCACACTGAACTATTCAGTGCCCGGAGTAAAT +
Preference number: 1 (lower is better)
Translates to: CLPPPPHSTHKSMRT*TGPGTLNYSVPGVN
Trigger: ATTTACTCCGGGCACTGAATAGTTCAGTGTGCCTGGGCCAGTGCATGTGCGCATGCTTTTGTGTGTGGAGTGGGGTGGTGGAGGTAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp GACACGCCTCCATCTCGGACAAAGGTGCGGAGCTGGGAAAAGAGATaGTTTCTTCAGGAAAGGGTGAGCCCTGCAACTCGACAAATCGTG +
Preference number: 1 (lower is better)
Translates to: DTPPSRTKVRSWEKR*FLQERVSPATRQIV
Trigger: CACGATTTGTCGAGTTGCAGGGCTCACCCTTTCCTGAAGAAACCATCTCTTTTCCCAGCTCCGCACCTTTGTCCGAGATGGAGGCGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp TTCCCCAAGATAGACTCCACCTCCTCTGGAAAGATGCTGTGCTCCTaGCAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCTTGGGAAG +
Preference number: 1 (lower is better)
Translates to: FPKIDSTSSGKMLCS*QGFVSLGRNPCLGK
Trigger: CTTCCCAAGACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAGGAGGTGGAGTCTATCTTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR TCA 90 bp ATGTGCCCCATCCTCCCCTCAGTGACGTCCACAGAACTGCAGCGCTaGGAAGGCCAGATTGCAGATCTGAAGTCCAACTCCCTCATTATA +
Preference number: 1 (lower is better)
Translates to: MCPILPSVTSTELQR*EGQIADLKSNSLII
Trigger: TATAATGAGGGAGTTGGACTTCAGATCTGCAATCTGGCCTTCTCAGCGCTGCAGTTCTGTGGACGTCACTGAGGGGAGGATGGGGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp GGTCCCACAGCTGCCAAGCCTGCAACTTTGTGCAGTTGCAGAGTTTaGACTTTAAATTGGGCAGGGACCATGAGGTCCCTGAAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: GPTAAKPATLCSCRV*TLNWAGTMRSLKAG
Trigger: CCCTGCTTTCAGGGACCTCATGGTCCCTGCCCAATTTAAAGTTCAAACTCTGCAACTGCACAAAGTTGCAGGCTTGGCAGCTGTGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp TTATGGGCCTGGAGCCTATGGCATCCAAGGCGCAGAACTGCAACGTaGCCCAGTATTCAGATTCTCTGTCCACTCTCTCTCCTATGCCCA +
Preference number: 1 (lower is better)
Translates to: LWAWSLWHPRRRTAT*PSIQILCPLSLLCP
Trigger: TGGGCATAGGAGAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTGGATGCCATAGGCTCCAGGCCCATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp GGCACAGGTTCCAGTTTGTCCTTCTGGATTCTAGTGTGCCCTTACTaGCCCTCACTTCACACTCAGCCTTCTTTCCTAACTGCTGGCCCA +
Preference number: 1 (lower is better)
Translates to: GTGSSLSFWILVCPY*PSLHTQPSFLTAGP
Trigger: TGGGCCAGCAGTTAGGAAAGAAGGCTGAGTGTGAAGTGAGGGGCAGTAAGGGCACACTAGAATCCAGAAGGACAAACTGGAACCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp AAGAGAAAGAAGAAATCTAGCCCGGAAGGACAGACAGGGCTCCACTaGTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGG +
Preference number: 1 (lower is better)
Translates to: KRKKKSSPEGQTGLH*CHKALSSQPTQERR
Trigger: CCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAGCAGTGGAGCCCTGTCTGTCCTTCCGGGCTAGATTTCTTCTTTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp GGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTaGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTCAAGAA +
Preference number: 1 (lower is better)
Translates to: GPQEVLHVLGRAPGP*KSFVSLRKTPCPQE
Trigger: TTCTTGAGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR CCA 90 bp CTGAGACAAGTCAGGAGACAACCAAGGATTCCCATTTTGGGAGCCTaGAGACAGGCCTGGTTCAGCGGCTACGTCCAGCACTGTCATATT +
Preference number: 1 (lower is better)
Translates to: LRQVRRQPRIPILGA*RQAWFSGYVQHCHI
Trigger: AATATGACAGTGCTGGACGTAGCCGCTGAACCAGGCCTGTCTCCAGGCTCCCAAAATGGGAATCCTTGGTTGTCTCCTGACTTGTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp AAGCTGAGGCTGAGAACATTGTTAACAAGTGGAAGAGCTGGGGCTTaGACCCTAGTCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCT +
Preference number: 1 (lower is better)
Translates to: KLRLRTLLTSGRAGA*TLVPSDSRAILIFS
Trigger: AGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGACTAGGGTCCAAGCCCCAGCTCTTCCACTTGTTAACAATGTTCTCAGCCTCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp CCCCTCACTTCACACTCAGCCTTCTTTCCTAACTGCTGGCCCAGCTaGGCTGTAACAGCTTCAGGCCCAACACCAAATGCAGAAGTAACA +
Preference number: 1 (lower is better)
Translates to: PLTSHSAFFPNCWPS*AVTASGPTPNAEVT
Trigger: TGTTACTTCTGCATTTGGTGTTGGGCCTGAAGCTGTTACAGCTCAGCTGGGCCAGCAGTTAGGAAAGAAGGCTGAGTGTGAAGTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp CTTGGCCTGCTTGAAACCCCCACGCCTGTGTCCAGTGTCAGAATTTaGGATGGACATAGTTCTGTCTGCAGCAACACCCCCATCAGAAAC +
Preference number: 1 (lower is better)
Translates to: LGLLETPTPVSSVRI*DGHSSVCSNTPIRN
Trigger: GTTTCTGATGGGGGTGTTGCTGCAGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTTCAAGCAGGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp CACTATGCCCTTCACATGGCTGTCCCCTCGCTACATTATCTGTACTaGCGCACCCCCATGTCTTCGCACCCTTGTATGTATTGTGCTGTT +
Preference number: 1 (lower is better)
Translates to: HYALHMAVPSLHYLY*RTPMSSHPCMYCAV
Trigger: AACAGCACAATACATACAAGGGTGCGAAGACATGGGGGTGCGGCAGTACAGATAATGTAGCGAGGGGACAGCCATGTGAAGGGCATAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp AGGAACCTGGAGTCTCTGAAGCCCAGGTCCCACAGCTGCCAAGCCTaGAACTTTGTGCAGTTGCAGAGTTTGAACTTTAAATTGGGCAGG +
Preference number: 1 (lower is better)
Translates to: RNLESLKPRSHSCQA*NFVQLQSLNFKLGR
Trigger: CCTGCCCAATTTAAAGTTCAAACTCTGCAACTGCACAAAGTTGCAGGCTTGGCAGCTGTGGGACCTGGGCTTCAGAGACTCCAGGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp CAAAGGTGCGGAGCTGGGAAAAGAGATGGTTTCTTCAGGAAAGGGTaGGCCCTGCAACTCGACAAATCGTGGATACAACGAAACAGGAGG +
Preference number: 1 (lower is better)
Translates to: QRCGAGKRDGFFRKG*ALQLDKSWIQRNRR
Trigger: CCTCCTGTTTCGTTGTATCCACGATTTGTCGAGTTGCAGGGCTCACCCTTTCCTGAAGAAACCATCTCTTTTCCCAGCTCCGCACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp CTCAAATGCCTCCGCCAGGCCCACTTGGTCTTACTGTTAGAGGTGTaGGTGATAAAGAAAAATGCAGTCAGGTGGTTTCCCACCCTTGGC +
Preference number: 1 (lower is better)
Translates to: LKCLRQAHLVLLLEV*VIKKNAVRWFPTLG
Trigger: GCCAAGGGTGGGAAACCACCTGACTGCATTTTTCTTTATCACTCACACCTCTAACAGTAAGACCAAGTGGGCCTGGCGGAGGCATTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp CTGAACTATTCAGTGCCCGGAGTAAATATCAGTCTTTCCTGCCTCTaGATTCCCCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTG +
Preference number: 1 (lower is better)
Translates to: LNYSVPGVNISLSCL*IPPCCSLSMSKHVV
Trigger: CACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGGGGAATGCAGAGGCAGGAAAGACTGATATTTACTCCGGGCACTGAATAGTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp CCCCTCAGTGACGTCCACAGAACTGCAGCGCTGAGAAGGCCAGATTaGAGATCTGAAGTCCAACTCCCTCATTATACAGATGGTGAAACT +
Preference number: 1 (lower is better)
Translates to: PLSDVHRTAALRRPD*RSEVQLPHYTDGET
Trigger: AGTTTCACCATCTGTATAATGAGGGAGTTGGACTTCAGATCTGCAATCTGGCCTTCTCAGCGCTGCAGTTCTGTGGACGTCACTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp AGTCGGGTCTGGCTCATCTCTGTAGCTCCCACAGCATGTTCCCTATaGAAGGTTTGCGGGACTGAATTGTCACTCAGAAGCTTTCAGAAC +
Preference number: 1 (lower is better)
Translates to: SRVWLISVAPTACSL*KVCGTELSLRSFQN
Trigger: GTTCTGAAAGCTTCTGAGTGACAATTCAGTCCCGCAAACCTTCCATAGGGAACATGCTGTGGGAGCTACAGAGATGAGCCAGACCCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp AGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTaGCCAACACAATGGCAACAGGAAGGCACAGGACCACACCTATTG +
Preference number: 1 (lower is better)
Translates to: SFYSEVAVLPPPTFQ*PTQWQQEGTGPHLL
Trigger: CAATAGGTGTGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp CCAGTGCCAGGCTCTGTTCTAAGAGCTTCGCATGCTTCCTGTCACTaGATCCTTAAAACAAGCCCACAAGGAAATACTGCCGTCTCCATG +
Preference number: 1 (lower is better)
Translates to: PVPGSVLRASHASCH*ILKTSPQGNTAVSM
Trigger: CATGGAGACGGCAGTATTTCCTTGTGGGCTTGTTTTAAGGATCCAGTGACAGGAAGCATGCGAAGCTCTTAGAACAGAGCCTGGCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp ATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTaGGAAAGACTCCATGTCCTCAAGAAATACAGCCTGTCTCCTTCT +
Preference number: 1 (lower is better)
Translates to: MSWEGLQVPGRVLCP*ERLHVLKKYSLSPS
Trigger: AGAAGGAGACAGGCTGTATTTCTTGAGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR TCA 90 bp GGAATAGGCATTAGAAACTGTTTAGAAATGAATGCAGGGCCCAGATaGGCGGGATCAGACTGTGTACAGGGTGTGACAAAAGCCTCCGGC +
Preference number: 1 (lower is better)
Translates to: GIGIRNCLEMNAGPR*AGSDCVQGVTKASG
Trigger: GCCGGAGGCTTTTGTCACACCCTGTACACAGTCTGATCCCGCTCATCTGGGCCCTGCATTCATTTCTAAACAGTTTCTAATGCCTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR TCA 90 bp ATTCAAGGCAAGGAAGGGCTGTTTGAATCTTGGGATCTCCCCCACTaGGACAAGTCAGGAGACAACCAAGGATTCCCATTTTGGGAGCCT +
Preference number: 1 (lower is better)
Translates to: IQGKEGLFESWDLPH*DKSGDNQGFPFWEP
Trigger: AGGCTCCCAAAATGGGAATCCTTGGTTGTCTCCTGACTTGTCTCAGTGGGGGAGATCCCAAGATTCAAACAGCCCTTCCTTGCCTTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp CTCTGTAGCTCCCACAGCATGTTCCCTATGGAAGGTTTGCGGGACTaGATTGTCACTCAGAAGCTTTCAGAACATCACCCTGTGGGGATT +
Preference number: 1 (lower is better)
Translates to: LCSSHSMFPMEGLRD*IVTQKLSEHHPVGI
Trigger: AATCCCCACAGGGTGATGTTCTGAAAGCTTCTGAGTGACAATTCAGTCCCGCAAACCTTCCATAGGGAACATGCTGTGGGAGCTACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp TATGGGGCTGAAATATTTGATCTTCATGGCCCAAGGAACACTAGGTaGGCATCATCCATTACCCACCTGCCTTCCGGAGCTCATCTCACC +
Preference number: 1 (lower is better)
Translates to: YGAEIFDLHGPRNTR*ASSITHLPSGAHLT
Trigger: GGTGAGATGAGCTCCGGAAGGCAGGTGGGTAATGGATGATGCTCACCTAGTGTTCCTTGGGCCATGAAGATCAAATATTTCAGCCCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp GATAAAGAAAAATGCAGTCAGGTGGTTTCCCACCCTTGGCCTGCTTaGAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACA +
Preference number: 1 (lower is better)
Translates to: DKEKCSQVVSHPWPA*NPHACVQCQNLRWT
Trigger: TGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTTCAAGCAGGCCAAGGGTGGGAAACCACCTGACTGCATTTTTCTTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp TGGCTCATCTCTGTAGCTCCCACAGCATGTTCCCTATGGAAGGTTTaGGGGACTGAATTGTCACTCAGAAGCTTTCAGAACATCACCCTG +
Preference number: 1 (lower is better)
Translates to: WLISVAPTACSLWKV*GTELSLRSFQNITL
Trigger: CAGGGTGATGTTCTGAAAGCTTCTGAGTGACAATTCAGTCCCGCAAACCTTCCATAGGGAACATGCTGTGGGAGCTACAGAGATGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp AGCACTTTGTCAGGATCTTCCACTTCACACTTGTCCCATCTAACTTaGATTCATGACACTTCACCACCGTGTGAGCTCCTTCAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: STLSGSSTSHLSHLT*IHDTSPPCELLQGR
Trigger: CCTGCCCTGAAGGAGCTCACACGGTGGTGAAGTGTCATGAATGCAAGTTAGATGGGACAAGTGTGAAGTGGAAGATCCTGACAAAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp GGGAGGTTTGGCTTTCTTTATCCTGACCATCTATCCTTCACGGGCTaGTGCCAAGTTAATCGTCCCAAGAAAGCTCTGGTTAGCTCACGT +
Preference number: 1 (lower is better)
Translates to: GRFGFLYPDHLSFTG*CQVNRPKKALVSSR
Trigger: ACGTGAGCTAACCAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTCAGGATAAAGAAAGCCAAACCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp TGGGGACCAGATGGAATGATGGAAATCCCGGGGATGGATGAAGTATaGACACTGGTGATCAGTGAGAATGCTCTCCCAACTTCTTGGCAT +
Preference number: 1 (lower is better)
Translates to: WGPDGMMEIPGMDEV*TLVISENALPTSWH
Trigger: ATGCCAAGAAGTTGGGAGAGCATTCTCACTGATCACCAGTGTCCATACTTCATCCATCCCCGGGATTTCCATCATTCCATCTGGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp CCTTGTCTGTCAAAACCCAGAGCAGAAACAGCTTCAAGGTGTGTCTaGATAGCCAAGGCCTTAGACAACTTTACGGGTCTCCACATATGG +
Preference number: 1 (lower is better)
Translates to: PCLSKPRAETASRCV*IAKALDNFTGLHIW
Trigger: CCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTTGGCTATGCAGACACACCTTGAAGCTGTTTCTGCTCTGGGTTTTGACAGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp AGGCTTCACCATTTCTCTTTCAAATGTTCCAATAGCTGTGGTCACTaGACTTTGTCCTCCAAGGTCTCCCAAAGTCCATCCTCTGCCCCA +
Preference number: 1 (lower is better)
Translates to: RLHHFSFKCSNSCGH*TLSSKVSQSPSSAP
Trigger: TGGGGCAGAGGATGGACTTTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAAAGAGAAATGGTGAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp AGGTTTGGCTTTCTTTATCCTGACCATCTATCCTTCACGGGCTGCTaGCAAGTTAATCGTCCCAAGAAAGCTCTGGTTAGCTCACGTGTG +
Preference number: 1 (lower is better)
Translates to: RFGFLYPDHLSFTGC*QVNRPKKALVSSRV
Trigger: CACACGTGAGCTAACCAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTCAGGATAAAGAAAGCCAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 90 bp GCGGAGCTGGGAAAAGAGATGGTTTCTTCAGGAAAGGGTGAGCCCTaGAACTCGACAAATCGTGGATACAACGAAACAGGAGGAATAAGA +
Preference number: 1 (lower is better)
Translates to: AELGKEMVSSGKGEP*NSTNRGYNETGGIR
Trigger: TCTTATTCCTCCTGTTTCGTTGTATCCACGATTTGTCGAGTTGCAGGGCTCACCCTTTCCTGAAGAAACCATCTCTTTTCCCAGCTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp CTGGCCATAAGACATTTTTCCAGTTCTAACAAGACTACTGTTCTCTaGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTT +
Preference number: 1 (lower is better)
Translates to: LAIRHFSSSNKTTVL*THLGFLLGIPDAGL
Trigger: AAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCAGAGAACAGTAGTCTTGTTAGAACTGGAAAAATGTCTTATGGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp GGGAGTGATGAAAATCTCAGGGAAGGGATGCCATGTGGACACTGGTaGCCACAAAGAACACTCTCCCATTATCTTAGCATCATGGCAACT +
Preference number: 1 (lower is better)
Translates to: GSDENLREGMPCGHW*PQRTLSHYLSIMAT
Trigger: AGTTGCCATGATGCTAAGATAATGGGAGAGTGTTCTTTGTGGTCACCAGTGTCCACATGGCATCCCTTCCCTGAGATTTTCATCACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp AGGGACAGAGAGATTTGTGAATGGCCTAATGACTACCACACCAGCTaGCAGTGTCAACCCAAGAGCTATGGGAGGTTTGGCTTTCTTTAT +
Preference number: 1 (lower is better)
Translates to: RDREICEWPNDYHTS*QCQPKSYGRFGFLY
Trigger: ATAAAGAAAGCCAAACCTCCCATAGCTCTTGGGTTGACACTGTCAGCTGGTGTGGTAGTCATTAGGCCATTCACAAATCTCTCTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp GACAGGGATAGGGACAGGATGGTAATAATATCATCTACTGCTCACTaGCTATTTACCAGTGCCAGGCTCTGTTCTAAGAGCTTCGCATGC +
Preference number: 1 (lower is better)
Translates to: DRDRDRMVIISSTAH*LFTSARLCSKSFAC
Trigger: GCATGCGAAGCTCTTAGAACAGAGCCTGGCACTGGTAAATAGTCAGTGAGCAGTAGATGATATTATTACCATCCTGTCCCTATCCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp TTCTCACTACTCACTTGGCCACACCATTCTCTGCTCAGTGCCCCATaGAAGAGACGTGATTGCAGAAAGCAGATAACAAAGGCATGTTTT +
Preference number: 1 (lower is better)
Translates to: FSLLTWPHHSLLSAP*KRRDCRKQITKACF
Trigger: AAAACATGCCTTTGTTATCTGCTTTCTGCAATCACGTCTCTTCCATGGGGCACTGAGCAGAGAATGGTGTGGCCAAGTGAGTAGTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 90 bp GGCATTTTCTGGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATaGTTTCGTGTGCTGGTTCTAGTTTCCATGAATGTGTTACGATCA +
Preference number: 1 (lower is better)
Translates to: GIFWTQSYFFRATSQ*FRVLVLVSMNVLRS
Trigger: TGATCGTAACACATTCATGGAAACTAGAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCCAGAAAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp GTTACGATCAGACTTTTAAGTTGTGAGGAAAACCCACCATGTTACTaGTGTAGCTCTTCAGAAAGAGCAGGTGTTACTGCAAACAGGAGA +
Preference number: 1 (lower is better)
Translates to: VTIRLLSCEENPPCY*CSSSERAGVTANRR
Trigger: TCTCCTGTTTGCAGTAACACCTGCTCTTTCTGAAGAGCTACATCAGTAACATGGTGGGTTTTCCTCACAACTTAAAAGTCTGATCGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 90 bp TCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGTCTCACTaGTTTAAATCATCTCAGCATACGTATACATACATAAACACACAC +
Preference number: 1 (lower is better)
Translates to: SFCVGCGHHKESLSH*FKSSQHTYTYINTH
Trigger: GTGTGTGTTTATGTATGTATACGTATGCTGAGATGATTTAAATCAGTGAGACAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTCCCAGACGCTGCCTCTaGGAAGGAAGCCTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: QKPPAVAPISPADSLRGPPRRCL*EGSLRP
Trigger: TGGCCTCAGGCTTCCTTCCCAGAGGCAGCGTCTGGG...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATCCCAGACGCTGCCTCTaGGAAGGAAGCCTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHPRRCL*EGSLRP
Trigger: TGGCCTCAGGCTTCCTTCCCAGAGGCAGCGTCTGGG...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCGCCTGGAGACAGGCCTaGTTCAGCGGCTACGTCCAG +
Preference number: 2 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGAWRQA*FSGYVQ
Trigger: CTGGACGTAGCCGCTGAACCAGGCCTGTCTCCAGGC...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp ATGGAGGTCACCTGGGAGAGACCACAGCCTCGCCCACCGCTCCCTTaGCAAAGCTGGTCACAACTGACCGCACCTCCACCAGATTCGTGC +
Preference number: 2 (lower is better)
Translates to: MEVTWERPQPRPPLP*QSWSQLTAPPPDSC
Trigger: GCACGAATCTGGTGGAGGTGCGGTCAGTTGTGACCAGCTTTGCAAAGGGAGCGGTGGGCGAGGCTGTGGTCTCTCCCAGGTGACCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp GCAGGGCGAGGTGCGGGGAACCTAGCCCATCCCAGCACCGTGCACTaGCTCATAATGAACTCGGCACTTCCCAAACCACAGCTCCCCTCA +
Preference number: 2 (lower is better)
Translates to: AGRGAGNLAHPSTVH*LIMNSALPKPQLPS
Trigger: TGAGGGGAGCTGTGGTTTGGGAAGTGCCGAGTTCATTATGAGCAAGTGCACGGTGCTGGGATGGGCTAGGTTCCCCGCACCTCGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCGGGACTCCTTGGTCCTaGGGGACTCTGTGCCTGCAT +
Preference number: 2 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGGTPWS*GTLCLH
Trigger: ATGCAGGCACAGAGTCCCTCAGGACCAAGGAGTCCC...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGGGTACCCAGAGCTCATaGGTGGGCAGACCTGCATGC +
Preference number: 2 (lower is better)
Translates to: KAGGRARACTHKSPQMPPGTQSS*VGRPAC
Trigger: GCATGCAGGTCTGCCCACTCATGAGCTCTGGGTACC...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp CCTGGAGACAGGCCTGGTTCAGCGGCTACGTCCAGCACTGTCATATaGCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACT +
Preference number: 2 (lower is better)
Translates to: PGDRPGSAATSSTVI*LAPFPPGIPHAPQT
Trigger: AGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGCAATATGACAGTGCTGGACGTAGCCGCTGAACCAGGCCTGTCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCCTCCTTCCACTGTGCTaGGTGCTGGGCCAAGTGCAA +
Preference number: 2 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGLLPLC*VLGQVQ
Trigger: TTGCACTTGGCCCAGCACTCAGCACAGTGGAAGGAG...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGAAGGGCACCCCCATGTTaGTCATCTGCTGGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGRAPPC*SSAGSP
Trigger: TGGGGAGCCAGCAGATGAGCAACATGGGGGTGCCCT...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCAGAGGGAGGCTGACCTaGTGCAGCTCAGACATCAGG +
Preference number: 2 (lower is better)
Translates to: ESRGQADCLCGRGARGRSRGRLT*CSSDIR
Trigger: CCTGATGTCTGAGCTGCAGCAGGTCAGCCTCCCTCT...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCGCCATTGCACCCACATaGAGAGGAGCTGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: ESRGQADCLCGRGARGRSAIAPT*RGAAQQ
Trigger: CTGCTGAGCAGCTCCTCTGCATGTGGGTGCAATGGC...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCCACCAGATTCGTGCCTaGCTTCCCTCCTCGTGTGAC +
Preference number: 2 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGHQIRA*LPSSCD
Trigger: GTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTG...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGAGCTCCATGGCAAAGGTaGCAGCTTCTCCTGCAGGTC +
Preference number: 2 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGAPWQR*QLLLQV
Trigger: GACCTGCAGGAGAAGCTGTCACCTTTGCCATGGAGC...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCGACTACCACACCAGCTaGCAGTGTCAACCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: ESRGQADCLCGRGARGRSDYHTS*QCQPKS
Trigger: GCTCTTGGGTTGACACTGTCAGCTGGTGTGGTAGTC...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGAGGGAGGCTGACCTGCTaGAGCTCAGACATCAGGTCA +
Preference number: 2 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGGRLTC*SSDIRS
Trigger: TGACCTGATGTCTGAGCTGCAGCAGGTCAGCCTCCC...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCGGGCAGGTGGTAGGATaGCGCAGGGCCAGTGGGCTG +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLGQVVG*RRASGL
Trigger: CAGCCCACTGGCCCTGCGGCATCCTACCACCTGCCC...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCCATGCGCACATGCACTaGCCCAGGCACACTGAACTA +
Preference number: 2 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGHAHMH*PRHTEL
Trigger: TAGTTCAGTGTGCCTGGGCCAGTGCATGTGCGCATG...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGACCCATTTTGGGAGCCTaGAGACAGGCCTGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGPILGA*RQAWFS
Trigger: GCTGAACCAGGCCTGTCTCCAGGCTCCCAAAATGGG...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCAGCCCAAGAAGAGGGATaGGACTGGAGCACACAGGCT +
Preference number: 2 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEAAQEEG*DWSTQA
Trigger: AGCCTGTGTGCTCCAGTCCCATCCCTCTTCTTGGGC...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp TCTCCCCCACTGAGACAAGTCAGGAGACAACCAAGGATTCCCATTTaGGGAGCCTGGAGACAGGCCTGGTTCAGCGGCTACGTCCAGCAC +
Preference number: 2 (lower is better)
Translates to: SPPLRQVRRQPRIPI*GAWRQAWFSGYVQH
Trigger: GTGCTGGACGTAGCCGCTGAACCAGGCCTGTCTCCAGGCTCCCAAAATGGGAATCCTTGGTTGTCTCCTGACTTGTCTCAGTGGGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGATTCCACTGTGCTGAGTaGTGGGCCAAGTGCAAGCTC +
Preference number: 2 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGFHCAE*WAKCKL
Trigger: GAGCTTGCACTTGGCCCAGCACTCAGCACAGTGGAA...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGTTGGGAGGTGGAGGCTaGAGTGAGCTGAGATGGCGC +
Preference number: 2 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRLGGGG*SELRWR
Trigger: GCGCCATCTCAGCTCACTGCAGCCTCCACCTCCCAA...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCAGGGCTCCAGGTCCCTaGAAGAGTTTTGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGRAPGP*KSFVSL
Trigger: CAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAAGGGCTCCAGGTCCCTaGAAGAGTTTTGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: TAPVPAPSILQSLLHSTARAPGP*KSFVSL
Trigger: CAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATAGACTCCACCTCCTCTaGAAAGATGCTGTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHRLHLL*KDAVLL
Trigger: CAGGAGCACAGCATCTTTCCAGAGGAGGTGGAGTCT...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCGGAAGGGATGCCATGTaGACACTGGTGACCACAAAG +
Preference number: 2 (lower is better)
Translates to: ESRGQADCLCGRGARGRSGRDAM*TLVTTK
Trigger: CTTTGTGGTCACCAGTGTCCACATGGCATCCCTTCC...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATCACCATCTCAGGGAATaGCACCACCATCCCCAAATC +
Preference number: 2 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHHHLRE*HHHPQI
Trigger: GATTTGGGGATGGTGGTGCCATTCCCTGAGATGGTG...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACAGGTCCTGGGAGGCAGTaGCAGGGCGAGGTGCGGGGA +
Preference number: 2 (lower is better)
Translates to: FDESRSLRQSWKETPHFTGPGRQ*QGEVRG
Trigger: TCCCCGCACCTCGCCCTGCCACTGCCTCCCAGGACC...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp AATGCAGAGGTGAAAGCTGCCGTCCTAACTCTGCTGAGAGGAGGTTaGCTCTCCAGGAAAGCATCCCACTGCTACTGCTGCCCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: NAEVKAAVLTLLRGG*LSRKASHCYCCPLP
Trigger: GGGCAGAGGGCAGCAGTAGCAGTGGGATGCTTTCCTGGAGAGCAAACCTCCTCTCAGCAGAGTTAGGACGGCAGCTTTCACCTCTGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp GAGTCGTGCATTCGCTATCTGCTGGGTGCCTGCTATTGGCAGCACTaGCTGCATGAGGTGCTGGTAGGAAGGAGGCAGAGTCCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: ESCIRYLLGACYWQH*LHEVLVGRRQSPAL
Trigger: AAGAGCAGGACTCTGCCTCCTTCCTACCAGCACCTCATGCAGCAAGTGCTGCCAATAGCAGGCACCCAGCAGATAGCGAATGCACGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAAATGCAGGGCCCAGATaGGCGGGATCAGACTGTGTA +
Preference number: 2 (lower is better)
Translates to: LLCHTARKQESQIQAFRGNAGPR*AGSDCV
Trigger: TACACAGTCTGATCCCGCTCATCTGGGCCCTGCATT...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCGAAAGGCTCCACACCTaGAGGAGGGACTCCTTGGTC +
Preference number: 2 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESERLHT*RRDSLV
Trigger: GACCAAGGAGTCCCTCCTGCAGGTGTGGAGCCTTTC...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR GCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCCTCACACCTCCTCACTaGTTCTCACTACTCACTTGG +
Preference number: 2 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGLTPPH*FSLLTW
Trigger: CCAAGTGAGTAGTGAGAAGCAGTGAGGAGGTGTGAG...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCGAATCTGCCCCCACCTaGTTCTTCAGCCTGATTTTC +
Preference number: 2 (lower is better)
Translates to: ESRGQADCLCGRGARGRSESAPT*FFSLIF
Trigger: GAAAATCAGGCTGAAGAAGCAGGTGGGGGCAGATTC...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCATCCTTCACGGGCTGCTaGCAAGTTAATCGTCCCAAG +
Preference number: 2 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEASFTGC*QVNRPK
Trigger: CTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGA...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGACTATCCTTCACGGGCTaGTGCCAAGTTAATCGTCCC +
Preference number: 2 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGLSFTG*CQVNRP
Trigger: GGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAG...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGACATCCATTACCCACCTaGCTTCCGGAGCTCATCTCA +
Preference number: 2 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGHPLPT*LPELIS
Trigger: TGAGATGAGCTCCGGAAGGCAGGTGGGTAATGGATG...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCCCCAGACGCTGCCTCTaGGAAGGAAGCCTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLPRRCL*EGSLRP
Trigger: TGGCCTCAGGCTTCCTTCCCAGAGGCAGCGTCTGGG...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACACGGGTCTCCACATATaGCCCAGAAGTGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHTGLHI*PRSGRE
Trigger: CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGT...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACCAGAACATCACCCTGTaGGGATTGAGCCCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHQNITL*GLSPVL
Trigger: CAGCACAGGGCTCAATCCCCACAGGGTGATGTTCTG...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTAGAGTTTTGTGTCCTTaGGAAAGACTCCATGTCCTC +
Preference number: 2 (lower is better)
Translates to: QKPPAVAPISPADSLRGPRVLCP*ERLHVL
Trigger: GAGGACATGGAGTCTTTCTCAAGGACACAAAACTCT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR TCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGAGGAGAGAGAATGAGATaGAGTGGGCAAACCAGACAG +
Preference number: 2 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGGERMR*SGQTRQ
Trigger: CTGTCTGGTTTGCCCACTTCATCTCATTCTCTCTCC...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGATATAGCCCCAGCACCTaGTACCTAGCACAGAATAGG +
Preference number: 2 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGYSPST*YLAQNR
Trigger: CCTATTCTGTGCTAGGTATCAGGTGCTGGGGCTATA...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGCACCGAGTGAGTGAATaGATGACTGCAAACTCCATG +
Preference number: 2 (lower is better)
Translates to: KAGGRARACTHKSPQMPPHRVSE*MTANSM
Trigger: CATGGAGTTTGCAGTCATTCATTCACTCACTCGGTG...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCCCTGAGACGTGTACCTaGTATTCCAATTTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGPETCT*YSNFLG
Trigger: TCCCAGGAAATTGGAATAGCAGGTACACGTCTCAGG...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGCCTGAGACGTGTACCTaGTATTCCAATTTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWPETCT*YSNFLG
Trigger: TCCCAGGAAATTGGAATAGCAGGTACACGTCTCAGG...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCTCCCTATGGAAGGTTTaGGGGACTGAATTGTCACTC +
Preference number: 2 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGSLWKV*GTELSL
Trigger: GAGTGACAATTCAGTCCCGCAAACCTTCCATAGGGA...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCTTCTGGATTCTAGTGTaGCCTTACTGCCCCTCACTT +
Preference number: 2 (lower is better)
Translates to: ESRGQADCLCGRGARGRSFWILV*PYCPSL
Trigger: AAGTGAGGGGCAGTAAGGGCACACTAGAATCCAGAA...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACTGCAGAGGTGAAAGCTaGCGTCCTAACTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHCRGES*RPNSAE
Trigger: CTCAGCAGAGTTAGGACGGCAGCTTTCACCTCTGCA...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCCCTCCACCAGATTCGTaGCTGGCTTCCCTCCTCGTG +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLPPPDS*LASLLV
Trigger: CACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGG...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGAAGTTCTCCATGTCCTaGGAAGGGCTCCAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: PGTSASFCVGCGHHKESLKFSMS*EGLQVP
Trigger: AGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTT...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGCCCAGACGCTGCCTCTaGGAAGGAAGCCTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGPRRCL*EGSLRP
Trigger: TGGCCTCAGGCTTCCTTCCCAGAGGCAGCGTCTGGG...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATTTCTCACTACTCACTTaGCCACACCATTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHFSLLT*PHHSLL
Trigger: GAGCAGAGAATGGTGTGGCCAAGTGAGTAGTGAGAA...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGAGCTTCTACTCAGAAGTaGCTGTGTTGCCTCCACCTA +
Preference number: 2 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGASTQK*LCCLHL
Trigger: TAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGC...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCAACTGTAACCTGGAGGTaGTCCTGTTTGTGTTCTGCC +
Preference number: 2 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEATVTWR*SCLCSA
Trigger: GGCAGAACACAAACAGGACCACCTCCAGGTTACAGT...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCATCACTGACACCTCCTaGCTGCGGGTCACTGGAGGG +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLITDTS*LRVTGG
Trigger: CCCTCCAGTGACCCGCAGCCAGGAGGTGTCAGTGAT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGACTGTGTACAGGGTGTaGCAAAAGCCTCCGGCAGTA +
Preference number: 2 (lower is better)
Translates to: PGTSASFCVGCGHHKESLTVYRV*QKPPAV
Trigger: TACTGCCGGAGGCTTTTGTCACACCCTGTACACAGT...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR TCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGACCTGCTTCTTCAGCCTaGTTTTCCACTATGCCCTTC +
Preference number: 2 (lower is better)
Translates to: LLCHTARKQESQIQAFRGPASSA*FSTMPF
Trigger: GAAGGGCATAGTGGAAAATCAGGCTGAAGAAGCAGG...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCCACAGTTCAGTCCTGTaGCCAGTAACTCTATTGAGA +
Preference number: 2 (lower is better)
Translates to: ESRGQADCLCGRGARGRSHSSVL*PVTLLR
Trigger: TCTCAATAGAGTTACTGGTCACAGGACTGAACTGTG...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCAGGCCACACCATTCTCTaGTCAGTGCCCCATGGAAGA +
Preference number: 2 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPGHTIL*SVPHGR
Trigger: TCTTCCATGGGGCACTGAGCAGAGAATGGTGTGGCC...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACGGGTACAGCAATATCTaGCAGCCACAGCCCTGTATT +
Preference number: 2 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHGYSNI*QPQPCI
Trigger: AATACAGGGCTGTGGCTGGCAGATATTGCTGTACCC...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGATCCCTATGGAAGGTTTaGGGGACTGAATTGTCACTC +
Preference number: 2 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGSLWKV*GTELSL
Trigger: GAGTGACAATTCAGTCCCGCAAACCTTCCATAGGGA...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAGAGTGCTGGGCCAAGTaGAAGCTCCATGGCAAAGGT +
Preference number: 2 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVECWAK*KLHGKG
Trigger: ACCTTTGCCATGGAGCTTGCACTTGGCCCAGCACTC...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGGGCCAGAAAGTAAGTTaGTTGGCTTTCATGACCACA +
Preference number: 2 (lower is better)
Translates to: KAGGRARACTHKSPQMPPGQKVS*LAFMTT
Trigger: TGTGGTCATGAAAGCCAAGCAACTTACTTTCTGGCC...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACTGGAAATCCCGGGGATaGATGAAGTATGGACACTGG +
Preference number: 2 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHWKSRG*MKYGHW
Trigger: CCAGTGTCCATACTTCATCCATCCCCGGGATTTCCA...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCGCACTGTCATATTGCTaGCCCCCTTCCCTCCGGGAA +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLALSYC*PPSLRE
Trigger: TTCCCGGAGGGAAGGGGGCCAGCAATATGACAGTGC...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCTCCAGTTTGTCCTTCTaGATTCTAGTGTGCCCTTAC +
Preference number: 2 (lower is better)
Translates to: ESRGQADCLCGRGARGRSSSLSF*ILVCPY
Trigger: GTAAGGGCACACTAGAATCCAGAAGGACAAACTGGA...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCACACTGTGCTGAGTGCTaGGCCAAGTGCAAGCTCCAT +
Preference number: 2 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPHCAEC*AKCKLH
Trigger: ATGGAGCTTGCACTTGGCCCAGCACTCAGCACAGTG...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGACCACCTACATTTCAGTaGCCAACACAATGGCAACAG +
Preference number: 2 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGPPTFQ*PTQWQQ
Trigger: CTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGG...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCAGCTCTGCATGGCGATaGAGGTCACCTGGGAGAGAC +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLSSAWR*RSPGRD
Trigger: GTCTCTCCCAGGTGACCTCCATCGCCATGCAGAGCT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCAGCTGGGAAAAGAGATaGTTTCTTCAGGAAAGGGTG +
Preference number: 2 (lower is better)
Translates to: ESRGQADCLCGRGARGRSSWEKR*FLQERV
Trigger: CACCCTTTCCTGAAGAAACCATCTCTTTTCCCAGCT...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCAGCAGTGCTGGGCTCTaGAGAATGGGCAGAACACCC +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLSSAGL*RMGRTP
Trigger: GGGTGTTCTGCCCATTCTCCAGAGCCCAGCACTGCT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp CTGAAGCCCAGGTCCCACAGCTGCCAAGCCTGCAACTTTGTGCAGTaGCAGAGTTTGAACTTTAAATTGGGCAGGGACCATGAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: LKPRSHSCQACNFVQ*QSLNFKLGRDHEVP
Trigger: AGGGACCTCATGGTCCCTGCCCAATTTAAAGTTCAAACTCTGCAACTGCACAAAGTTGCAGGCTTGGCAGCTGTGGGACCTGGGCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACCTAGGGAGGATCGCTTaGACTTGGGAGGTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: KLLLRSGCVASTYISVANLGRIA*TWEVEA
Trigger: AGCCTCCACCTCCCAAGTTCAAGCGATCCTCCCTAG...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGGCCCCTATATGTTCCTaGAACTGTCCTTTAAGAATC +
Preference number: 2 (lower is better)
Translates to: KAGGRARACTHKSPQMPPAPICS*NCPLRI
Trigger: GATTCTTAAAGGACAGTTTCAGGAACATATAGGGGC...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCAAAGTCACCGAGTGAGTaGATGAATGACTGCAAACTC +
Preference number: 2 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEAKSPSE*MNDCKL
Trigger: GAGTTTGCAGTCATTCATTCACTCACTCGGTGACTT...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGTCCAGTGTCAGAATTTaGGATGGACATAGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: KAGGRARACTHKSPQMPPSSVRI*DGHSSV
Trigger: GACAGAACTATGTCCATCTCAAATTCTGACACTGGA...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGAGCTGGGCTTGGTGGTaGACACCTCTAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALSWAWW*TPLIPA
Trigger: AGCTGGGATTAGAGGTGTGCACCACCAAGCCCAGCT...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAATCTCAGGGAAGGGATaGCATGTGGACACTGGTGAC +
Preference number: 2 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVISGKG*HVDTGD
Trigger: GTCACCAGTGTCCACATGGCATCCCTTCCCTGAGAT...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCCATGCCCCAGGCAGCTaGAAGTGCTCAGGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFHAPGS*KCSGVS
Trigger: TGAGACCCCTGAGCACTTGCAGCTGCCTGGGGCATG...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCAACACCATCTCTCTCATaGATCCTTTCCCATTGCACT +
Preference number: 2 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEATPSLS*ILSHCT
Trigger: AGTGCAATGGGAAAGGATGCATGAGAGAGATGGTGT...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGAGGCCCAACACCAAATaGAGAAGTAACAGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: KAGGRARACTHKSPQMPPRPNTK*RSNSFA
Trigger: TGCAAAACTGTTACTTCTGCATTTGGTGTTGGGCCT...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCAGGGCACCCCCATGTTaGTCATCTGCTGGCTCCCCA +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFRAPPC*SSAGSP
Trigger: TGGGGAGCCAGCAGATGAGCAACATGGGGGTGCCCT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTATGCAGAGGTGAAAGCTaGCGTCCTAACTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVCRGES*RPNSAE
Trigger: CTCAGCAGAGTTAGGACGGCAGCTTTCACCTCTGCA...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAGGACATCTCCCTCAATaGGCTGGCATTAATGGTGGC +
Preference number: 2 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVGHLPQ*AGINGG
Trigger: GCCACCATTAATGCCAGCGCATTGAGGGAGATGTCC...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCAGGGCTCCAGGTCCCTaGAAGAGTTTTGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVRAPGP*KSFVSL
Trigger: CAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGGCTTCTACTCAGAAGTaGCTGTGTTGCCTCCACCTA +
Preference number: 2 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRASTQK*LCCLHL
Trigger: TAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGC...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp ATATCTGCCAGCCACAGCCCTGTATTCAAGGCAAGGAAGGGCTGTTaGAATCTTGGGATCTCCCCCACTGAGACAAGTCAGGAGACAACC +
Preference number: 2 (lower is better)
Translates to: ISASHSPVFKARKGC*NLGISPTETSQETT
Trigger: GGTTGTCTCCTGACTTGTCTCAGTGGGGGAGATCCCAAGATTCAAACAGCCCTTCCTTGCCTTGAATACAGGGCTGTGGCTGGCAGATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp ACTACCACACCAGCTGACAGTGTCAACCCAAGAGCTATGGGAGGTTaGGCTTTCTTTATCCTGACCATCTATCCTTCACGGGCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: TTTPADSVNPRAMGG*AFFILTIYPSRAAA
Trigger: GGCAGCAGCCCGTGAAGGATAGATGGTCAGGATAAAGAAAGCCAAACCTCCCATAGCTCTTGGGTTGACACTGTCAGCTGGTGTGGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACTCCCAAATGGACAAATaGTCTTTTCTGGCACTCAGG +
Preference number: 2 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHSQMDK*SFLALR
Trigger: CCTGAGTGCCAGAAAAGATCATTTGTCCATTTGGGA...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATAAAAGGAAGAGTCCCTaGGCTCCACACCCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYKRKSP*APHPRP
Trigger: TGGCCTGGGGTGTGGAGCTCAGGGACTCTTCCTTTT...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCCTCCTCTGGAAAGATaGTGTGCTCCTGACAGGGCT +
Preference number: 2 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVPPLER*CAPDRA
Trigger: AGCCCTGTCAGGAGCACAGCATCTTTCCAGAGGAGG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR GCA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCAGAATCTGCCCCCACCTaGTTCTTCAGCCTGATTTTC +
Preference number: 2 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPESAPT*FFSLIF
Trigger: GAAAATCAGGCTGAAGAAGCAGGTGGGGGCAGATTC...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAGGCCAGAAAGTAAGTTaGTTGGCTTTCATGACCACA +
Preference number: 2 (lower is better)
Translates to: LLCHTARKQESQIQAFRGGQKVS*LAFMTT
Trigger: TGTGGTCATGAAAGCCAAGCAACTTACTTTCTGGCC...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCGGAAAGGGTGAGCCCTaGAACTCGACAAATCGTGGA +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLGKGEP*NSTNRG
Trigger: TCCACGATTTGTCGAGTTGCAGGGCTCACCCTTTCC...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCCATCCTCATCTTCTCTaGCACACAGCCAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLHPHLL*HTARKQ
Trigger: CTGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATG...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCTTTGGAAGGCAAAAGTaGGCCAGGTGTGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLFGRQK*ARCGGS
Trigger: TGAGCCACCACACCTGGCCCACTTTTGCCTTCCAAA...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCAGCTCTGCATGGCGATaGAGGTCACCTGGGAGAGAC +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFSSAWR*RSPGRD
Trigger: GTCTCTCCCAGGTGACCTCCATCGCCATGCAGAGCT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp CATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTaGAGAAAGACTCCATGTCCTCAAGAAATACAGCCTGTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: HVLGRAPGPWKSFVS*RKTPCPQEIQPVSF
Trigger: GAAGGAGACAGGCTGTATTTCTTGAGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR CAA 90 bp AGTGCCCGGAGTAAATATCAGTCTTTCCTGCCTCTGCATTCCCCCTaGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTA +
Preference number: 2 (lower is better)
Translates to: SARSKYQSFLPLHSP*LFPLHVQTRGDLKL
Trigger: TAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGGGGAATGCAGAGGCAGGAAAGACTGATATTTACTCCGGGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp GTAGCTCCCACAGCATGTTCCCTATGGAAGGTTTGCGGGACTGAATaGTCACTCAGAAGCTTTCAGAACATCACCCTGTGGGGATTGAGC +
Preference number: 2 (lower is better)
Translates to: VAPTACSLWKVCGTE*SLRSFQNITLWGLS
Trigger: GCTCAATCCCCACAGGGTGATGTTCTGAAAGCTTCTGAGTGACAATTCAGTCCCGCAAACCTTCCATAGGGAACATGCTGTGGGAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp CAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCACACCTATaGTTAAGGGGGAAAAGCACACTATCGTGTGTCTGGATGGCAAAC +
Preference number: 2 (lower is better)
Translates to: QWPTQWQQEGTGPHL*LRGKSTLSCVWMAN
Trigger: GTTTGCCATCCAGACACACGATAGTGTGCTTTTCCCCCTTAACAATAGGTGTGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp ATGACCTCAAACCTTGAGAGGCTTAAAGCCATTAAGGTTTGTTTCTaGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTC +
Preference number: 2 (lower is better)
Translates to: MTSNLERLKAIKVCF*LLMQVHQRLVGLLL
Trigger: GAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAGAAACAAACCTTAATGGCTTTAAGCCTCTCAAGGTTTGAGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTAGGCAGAGGTTGCAGTaGGCTGAGATCGCACCATTG +
Preference number: 2 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSRQRLQ*AEIAPL
Trigger: CAATGGTGCGATCTCAGCTCACTGCAACCTCTGCCT...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCGTTGCTTGGCTTTCATaGCCACAGTTCAGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLVAWLS*PQFSPV
Trigger: CACAGGACTGAACTGTGGTCATGAAAGCCAAGCAAC...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTCTCTGCATTCCCCCTTaGTGTTCCCTCTCCATGTCC +
Preference number: 2 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSLCIPP*CSLSMS
Trigger: GGACATGGAGAGGGAACAGCAAGGGGGAATGCAGAG...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTTTCCACTGTGCTGAGTaGTGGGCCAAGTGCAAGCTC +
Preference number: 2 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSFHCAE*WAKCKL
Trigger: GAGCTTGCACTTGGCCCAGCACTCAGCACAGTGGAA...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTCTGGGGGACAGGCTTTaGCAACTCACTGCTACAGTC +
Preference number: 2 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSLGDRL*QLTATV
Trigger: GACTGTAGCAGTGAGTTGGCAAAGCCTGTCCCCCAG...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGACCAAGATTACCCAAGTaGCCCTATATGTTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: LLCHTARKQESQIQAFRGPRLPK*PYMFLK
Trigger: TTTCAGGAACATATAGGGGCACTTGGGTAATCTTGG...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGAGACTCCACCTCCTCTaGAAAGATGCTGTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGRLHLL*KDAVLL
Trigger: CAGGAGCACAGCATCTTTCCAGAGGAGGTGGAGTCT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAGACTCCACCTCCTCTaGAAAGATGCTGTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRRLHLL*KDAVLL
Trigger: CAGGAGCACAGCATCTTTCCAGAGGAGGTGGAGTCT...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAGGGCTCAATAGGAATTaGGGAATAGGCATTAGAAAC +
Preference number: 2 (lower is better)
Translates to: LLCHTARKQESQIQAFRGGLNRN*GIGIRN
Trigger: GTTTCTAATGCCTATTCCCCAATTCCTATTGAGCCC...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACAACGGGTCTCCACATATaGCCCAGAAGTGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: FDESRSLRQSWKETPHFTTGLHI*PRSGRE
Trigger: CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGT...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCACTATGGCCATAATTTaGTCACATGAAACCGTAATG +
Preference number: 2 (lower is better)
Translates to: ESRGQADCLCGRGARGRSTMAII*SHETVM
Trigger: CATTACGGTTTCATGTGACCAAATTATGGCCATAGT...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCAGGGCCACAAGCCAATaGTTTCGTGTGCTGGTTCTA +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLRATSQ*FRVLVL
Trigger: TAGAACCAGCACACGAAACCATTGGCTTGTGGCCCT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp CACCATTTCTCTTTCAAATGTTCCAATAGCTGTGGTCACTGCACTTaGTCCTCCAAGGTCTCCCAAAGTCCATCCTCTGCCCCAGCCATC +
Preference number: 2 (lower is better)
Translates to: HHFSFKCSNSCGHCT*SSKVSQSPSSAPAI
Trigger: GATGGCTGGGGCAGAGGATGGACTTTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAAAGAGAAATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCAAGAGTTTTGTGTCCTTaGGAAAGACTCCATGTCCTC +
Preference number: 2 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPRVLCP*ERLHVL
Trigger: GAGGACATGGAGTCTTTCTCAAGGACACAAAACTCT...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGAGAAAGTCTGTCTCACTaGTTTAAATCATCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGESLSH*FKSSQH
Trigger: ATGCTGAGATGATTTAAATCAGTGAGACAGACTTTC...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGCTGATCAAGGACTTTTaGCAGCTCCCATTACCATTA +
Preference number: 2 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRLIKDF*QLPLPL
Trigger: TAATGGTAATGGGAGCTGTCAAAAGTCCTTGATCAG...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGGATTCATCACTCTTCTaGTCAAGGACTTTTGACAGC +
Preference number: 2 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRDSSLF*SRTFDS
Trigger: GCTGTCAAAAGTCCTTGATCAGAAGAGTGATGAATC...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAACCCTGCAGATGTACCTaGCCCTGGCGCTGGGATCAA +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKPCRCT*PWRWDQ
Trigger: TTGATCCCAGCGCCAGGGTCAGGTACATCTGCAGGG...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGATTCCTTAAGGAGAGATaGCCAGAAATCAAGCTTACA +
Preference number: 2 (lower is better)
Translates to: LLCHTARKQESQIQAFRGFLKER*PEIKLT
Trigger: TGTAAGCTTGATTTCTGGTCATCTCTCCTTAAGGAA...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp TTCAAATGTTCCAATAGCTGTGGTCACTGCACTTTGTCCTCCAAGGTCTCCCAACCTCCTCTGGAAAGATaGTGTGCTCCTGACAGGGCT +
Preference number: 2 (lower is better)
Translates to: FKCSNSCGHCTLSSKVSQPPLER*CAPDRA
Trigger: AGCCCTGTCAGGAGCACAGCATCTTTCCAGAGGAGG...TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCGCACAGCCCAGACGCTaGCTCTGGGAAGGAAGCCTG +
Preference number: 2 (lower is better)
Translates to: HSCDISCTPETCTCYSNFAQPRR*LWEGSL
Trigger: CAGGCTTCCTTCCCAGAGGCAGCGTCTGGGCTGTGC...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR GCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCAGCTGTGACCACAGGTaGAAACCACCATGCCTAGGA +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFSCDHR*KPPCLG
Trigger: TCCTAGGCATGGTGGTTTGCACCTGTGGTCACAGCT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACACATCCTCATCTTCTCTaGCACACAGCCAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: FDESRSLRQSWKETPHFTHPHLL*HTARKQ
Trigger: CTGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATG...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAGGGCTTTGTCTCCCTaGGAAGGAATCCATGTCTTG +
Preference number: 2 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRRALSP*EGIHVL
Trigger: CAAGACATGGATTCCTTCCCAGGGAGACAAAGCCCT...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCGAACCAATCAATCACTaGAGACACACAGACTCCACC +
Preference number: 2 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLEPINH*RHTDST
Trigger: GGTGGAGTCTGTGTGTCTCCAGTGATTGATTGGTTC...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCGCACCTCCCCTTCTGTaGCCACGTCATCAACTACTT +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFAPPLL*PRHQLL
Trigger: AAGTAGTTGATGACGTGGCCACAGAAGGGGAGGTGC...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTGCCAGGAGGCAAAGCTaGGTTTTGGAGTCGTGCATT +
Preference number: 2 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSARRQS*VLESCI
Trigger: AATGCACGACTCCAAAACCCAGCTTTGCCTCCTGGC...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGAGAGTTTTGTGTCCTTaGGAAAGACTCCATGTCCTC +
Preference number: 2 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALRVLCP*ERLHVL
Trigger: GAGGACATGGAGTCTTTCTCAAGGACACAAAACTCT...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGTCCCAAATGGACAAATaGTCTTTTCTGGCACTCAGG +
Preference number: 2 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALSQMDK*SFLALR
Trigger: CCTGAGTGCCAGAAAAGATCATTTGTCCATTTGGGA...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAAACTGCTGGCCCAGCTaGGCTGTAACAGCTTCAGGC +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKNCWPS*AVTASG
Trigger: GCCTGAAGCTGTTACAGCTCAGCTGGGCCAGCAGTT...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTGGAGAGAGAATGAGATaGAGTGGGCAAACCAGACAG +
Preference number: 2 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSGERMR*SGQTRQ
Trigger: CTGTCTGGTTTGCCCACTTCATCTCATTCTCTCTCC...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTGAAAGGCTCCACACCTaGAGGAGGGACTCCTTGGTC +
Preference number: 2 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTERLHT*RRDSLV
Trigger: GACCAAGGAGTCCCTCCTGCAGGTGTGGAGCCTTTC...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCGGACATAGTTCTGTCTaGAGCAACACCCCCATCAGA +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFGHSSV*SNTPIR
Trigger: TCTGATGGGGGTGTTGCTGCAGACAGAACTATGTCC...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCTGGAAATCCCGGGGATaGATGAAGTATGGACACTGG +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFWKSRG*MKYGHW
Trigger: CCAGTGTCCATACTTCATCCATCCCCGGGATTTCCA...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTAGAGTTTTGTGTCCTTaGGAAAGACTCCATGTCCTC +
Preference number: 2 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVRVLCP*ERLHVL
Trigger: GAGGACATGGAGTCTTTCTCAAGGACACAAAACTCT...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR TCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAGACTACCACACCAGCTaGCAGTGTCAACCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKDYHTS*QCQPKS
Trigger: GCTCTTGGGTTGACACTGTCAGCTGGTGTGGTAGTC...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGTGCAGTTTTAACAGATaGAGCAACTCATGCCTTGTC +
Preference number: 2 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALCSFNR*SNSCLV
Trigger: GACAAGGCATGAGTTGCTGCATCTGTTAAAACTGCA...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAGAGTGCTGGGCCAAGTaGAAGCTCCATGGCAAAGGT +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKECWAK*KLHGKG
Trigger: ACCTTTGCCATGGAGCTTGCACTTGGCCCAGCACTC...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGGGGCTCAATAGGAATTaGGGAATAGGCATTAGAAAC +
Preference number: 2 (lower is better)
Translates to: KALDNFTGLHIWPRSGREGLNRN*GIGIRN
Trigger: GTTTCTAATGCCTATTCCCCAATTCCTATTGAGCCC...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAACTGTGTACAGGGTGTaGCAAAAGCCTCCGGCAGTA +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKTVYRV*QKPPAV
Trigger: TACTGCCGGAGGCTTTTGTCACACCCTGTACACAGT...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCAATGCAGGGCCCAGATaGGCGGGATCAGACTGTGTA +
Preference number: 2 (lower is better)
Translates to: HSCDISCTPETCTCYSNFNAGPR*AGSDCV
Trigger: TACACAGTCTGATCCCGCTCATCTGGGCCCTGCATT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR TCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACACTGAGCCTTGAAGGATaGGTAGAAAAGAAAGGCACT +
Preference number: 2 (lower is better)
Translates to: FDESRSLRQSWKETPHFTLSLEG*VEKKGT
Trigger: AGTGCCTTTCTTTTCTACTCATCCTTCAAGGCTCAG...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAAAAGAGATGGAGCAGTaGTGGGCTCTGGAGAATGGG +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKKEMEQ*WALENG
Trigger: CCCATTCTCCAGAGCCCAGCACTGCTCCATCTCTTT...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTAGGGCTCCAGGTCCCTaGAAGAGTTTTGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTRAPGP*KSFVSL
Trigger: CAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTATGACCCCTCCTCACTaGGAGGGATGCACCCCAGCT +
Preference number: 2 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESMTPPH*EGCTPA
Trigger: AGCTGGGGTGCATCCCTCCCAGTGAGGAGGGGTCAT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCAGTTTGCATGTGATTTaGAAGGCAAAAGTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFSLHVI*KAKVGQ
Trigger: CTGGCCCACTTTTGCCTTCCAAATCACATGCAAACT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp TGTACCTGCTATTCCAATTTCCTGGGACCTCGGCTTCCTTCTGTGTaGGGTGTGGGCATCATAAGGAAAGTCTGTCTCACTGATTTAAAT +
Preference number: 2 (lower is better)
Translates to: CTCYSNFLGPRLPSV*GVGIIRKVCLTDLN
Trigger: ATTTAAATCAGTGAGACAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGGAAATTGGAATAGCAGGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR CAA 90 bp GGCCAAGATAGATTTGCAGTTTTAACAGATGCAGCAACTCATGCCTaGTCTGTCAAAACCCAGAGCAGAAACAGCTTCAAGGTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: GQDRFAVLTDAATHA*SVKTQSRNSFKVCL
Trigger: CAGACACACCTTGAAGCTGTTTCTGCTCTGGGTTTTGACAGACAAGGCATGAGTTGCTGCATCTGTTAAAACTGCAAATCTATCTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGGAAAGTCTGTCTCACTaGTTTAAATCATCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGESLSH*FKSSQH
Trigger: ATGCTGAGATGATTTAAATCAGTGAGACAGACTTTC...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCTTTCCCATTGCACTTTaGGATCGCTCTCTTTACATC +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFFPIAL*DRSLYI
Trigger: GATGTAAAGAGAGCGATCTCAAAGTGCAATGGGAAA...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCGATTCATCACTCTTCTaGTCAAGGACTTTTGACAGC +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFDSSLF*SRTFDS
Trigger: GCTGTCAAAAGTCCTTGATCAGAAGAGTGATGAATC...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCTTAAAGGTCAGTTACTaGCCAAGATTACCCAAGTGC +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFLKVSY*PRLPKC
Trigger: GCACTTGGGTAATCTTGGTCAGTAACTGACCTTTAA...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCAGGCCCAACACCAAATaGAGAAGTAACAGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFRPNTK*RSNSFA
Trigger: TGCAAAACTGTTACTTCTGCATTTGGTGTTGGGCCT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTAGGGCTTTGTCTCCCTaGGAAGGAATCCATGTCTTG +
Preference number: 2 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTRALSP*EGIHVL
Trigger: CAAGACATGGATTCCTTCCCAGGGAGACAAAGCCCT...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp CATAGAATAAAGACCCAACCTCCACTTATCTATCTAATCATATCATaGGCTGCTTACCTCCACCACCCCACTCCACACACAAAAGCATGC +
Preference number: 2 (lower is better)
Translates to: HRIKTQPPLIYLIIS*AAYLHHPTPHTKAC
Trigger: GCATGCTTTTGTGTGTGGAGTGGGGTGGTGGAGGTAAGCAGCCAATGATATGATTAGATAGATAAGTGGAGGTTGGGTCTTTATTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAAAGTATGGACACTGGTaGTCAGTGAGAATGCTCTCC +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKKYGHW*SVRMLS
Trigger: GGAGAGCATTCTCACTGATCACCAGTGTCCATACTT...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAAAGAGCTTTACTGACTaGAGACCACAGGGAGTGATG +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKKSFTD*RPQGVM
Trigger: CATCACTCCCTGTGGTCTTCAGTCAGTAAAGCTCTT...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp TTCAAATGTTCCAATAGCTGTGGTCACTGCACTTTGTCCTCCAAGGTCTCCCAATGCAGTTTTAACAGATaGAGCAACTCATGCCTTGTC +
Preference number: 2 (lower is better)
Translates to: FKCSNSCGHCTLSSKVSQCSFNR*SNSCLV
Trigger: GACAAGGCATGAGTTGCTGCATCTGTTAAAACTGCA...TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTGAACCAATCAATCACTaGAGACACACAGACTCCACC +
Preference number: 2 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTEPINH*RHTDST
Trigger: GGTGGAGTCTGTGTGTCTCCAGTGATTGATTGGTTC...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCATAGTTCAACTCAAATaGCAATCACTGACACCTCCT +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFIVQLK*QSLTPP
Trigger: AGGAGGTGTCAGTGATTGCCATTTGAGTTGAACTAT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp TTCAAAGCTAGGTTAGACACCATCTCTCTCATGCATCCTTTCCCATaGCACTTTGAGATCGCTCTCTTTACATCCTACAGCACTTTGTCA +
Preference number: 2 (lower is better)
Translates to: FKARLDTISLMHPFP*HFEIALFTSYSTLS
Trigger: TGACAAAGTGCTGTAGGATGTAAAGAGAGCGATCTCAAAGTGCAATGGGAAAGGATGCATGAGAGAGATGGTGTCTAACCTAGCTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTACTGTGTACAGGGTGTaGCAAAAGCCTCCGGCAGTA +
Preference number: 2 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESTVYRV*QKPPAV
Trigger: TACTGCCGGAGGCTTTTGTCACACCCTGTACACAGT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTCTGAGATCGCACCATTaGATTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESLRSHH*IPAWAT
Trigger: TGTTGCCCAGGCTGGAATGCAATGGTGCGATCTCAG...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTCTCTGCATTCCCCCTTaGTGTTCCCTCTCCATGTCC +
Preference number: 2 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIILCIPP*CSLSMS
Trigger: GGACATGGAGAGGGAACAGCAAGGGGGAATGCAGAG...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTAGTCTTTCCTGCCTCTaGATTCCCCCTTGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESSLSCL*IPPCCS
Trigger: GGAACAGCAAGGGGGAATGCAGAGGCAGGAAAGACT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAAGGTGCAAACCACCATaGCTAGGATCAGGATTTTTG +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKRCKPP*LGSGFL
Trigger: CAAAAATCCTGATCCTAGGCATGGTGGTTTGCACCT...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAGAGTTGCTGAGCCTCTaGGAAAATCTGGAAATTTGG +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKELLSL*ENLEIW
Trigger: CCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTC...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTCAAGGATTCCCATTTTaGGAGCCTGGAGACAGGCCT +
Preference number: 2 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESQGFPF*EPGDRP
Trigger: AGGCCTGTCTCCAGGCTCCCAAAATGGGAATCCTTG...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCATGAGGCTTCACACTTaGGGAATTCTTTACTTTTTG +
Preference number: 2 (lower is better)
Translates to: GHRVISLGPQANGFVCWFMRLHT*GILYFL
Trigger: CAAAAAGTAAAGAATTCCCCAAGTGTGAAGCCTCAT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAATTAAAGGTCAGTTACTaGCCAAGATTACCCAAGTGC +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKLKVSY*PRLPKC
Trigger: GCACTTGGGTAATCTTGGTCAGTAACTGACCTTTAA...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTGCTTCAAGGTGTGTCTaGATAGCCAAGGCCTTAGAC +
Preference number: 2 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIASRCV*IAKALD
Trigger: GTCTAAGGCCTTGGCTATGCAGACACACCTTGAAGC...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAACAAATGATCTTTTCTaGCACTCAGGAAAAATGGGG +
Preference number: 2 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKTNDLF*HSGKMG
Trigger: CCCCATTTTTCCTGAGTGCCAGAAAAGATCATTTGT...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTCCAAGGATCCCAACGTaGATAAGACTGTCGCATTGT +
Preference number: 2 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESPRIPT*IRLSHC
Trigger: ACAATGCGACAGTCTTATCCACGTTGGGATCCTTGG...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp TTAAAATTAGATTTACCAGACAATGAGACTGATATGTCAGTTAGCTaGCAAAGTAACCCTGGGTCTATCAGACCTCAGGTTGGAAGTTGC +
Preference number: 2 (lower is better)
Translates to: LKLDLPDNETDMSVS*QSNPGSIRPQVGSC
Trigger: GCAACTTCCAACCTGAGGTCTGATAGACCCAGGGTTACTTTGCAAGCTAACTGACATATCAGTCTCATTGTCTGGTAAATCTAATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTCTCAGAACTCAGCTATaGCCCTCATGGAAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIILRTQL*PSWKEK
Trigger: CTTCTCTTTCCATGAGGGTCATAGCTGAGTTCTGAG...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR TCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTCAAAAGCCTAGGTCCTaGAGGGAACAGAAAAGGCTT +
Preference number: 2 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIQKPRS*REQKRL
Trigger: AAGCCTTTTCTGTTCCCTTCAGGACCTAGGCTTTTG...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR GCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTCCCCTCTTGCTCATCTaGCTGTCTTACCTTTTCATC +
Preference number: 2 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIPLLLI*LSYLFI
Trigger: GATGAAAAGGTAAGACAGGCAGATGAGCAAGAGGGG...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTACAGCATGTTCCCTATaGAAGGTTTGCGGGACTGAA +
Preference number: 2 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIITACSL*KVCGTE
Trigger: TTCAGTCCCGCAAACCTTCCATAGGGAACATGCTGT...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTTTCCAAAAAGCTGGGTaGTCCAGATGGAAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIFQKAG*SRWKRR
Trigger: TCTCCTTTTCCATCTGGACCACCCAGCTTTTTGGAA...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 90 bp AAACAAAGCTCTTATAGTTCTGCTTTCCAGATTTCAGGTTTTACTTaGTCTTTACATCCCAGACTCAGAGAGAATCTCAGAGATCTAAAG +
Preference number: 2 (lower is better)
Translates to: KQSSYSSAFQISGFT*SLHPRLRENLRDLK
Trigger: CTTTAGATCTCTGAGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAAGCAGAACTATAAGAGCTTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTAGAAGGAATCCCAAATaGACAAATGATCTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESRRNPK*TNDLFW
Trigger: CCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp TGCGGTGGAGGCAAGGCAGGAGGACGGGCCAGAGCCTaGACACACAAAAGCCCTCAAATGCCTCCGCCAGGC +
Preference number: 3 (lower is better)
Translates to: CGGGKAGGRARA*THKSPQMPPPG
Trigger: GCCTGGCGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTTGCCTCCACCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp CCGCTTAGGTACCCAGAGCTCATGAGTGGGCAGACCTaGATGCAGATGGCAGCGCTGAGCTGGGGGACAGGC +
Preference number: 3 (lower is better)
Translates to: PLRYPELMSGQT*MQMAALSWGTG
Trigger: GCCTGTCCCCCAGCTCAGCGCTGCCATCTGCATGCAGGTCTGCCCACTCATGAGCTCTGGGTACCTAAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp CTCGCCCACCGCTCCCTTTGCAAAGCTGGTCACAACTaGCCGCACCTCCACCAGATTCGTGCCTGGCTTCCC +
Preference number: 3 (lower is better)
Translates to: LAHRSLCKAGHN*PHLHQIRAWLP
Trigger: GGGAAGCCAGGCACGAATCTGGTGGAGGTGCGGTCAGTTGTGACCAGCTTTGCAAAGGGAGCGGTGGGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GGCCTGGTTCAGCGGCTACGTCCAGCACTGTCATATTaGTGGCCCCCTTCCCTCCGGGAATCCCACATGCAC +
Preference number: 3 (lower is better)
Translates to: GLVQRLRPALSY*WPPSLRESHMH
Trigger: GTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGCAATATGACAGTGCTGGACGTAGCCGCTGAACCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp TTCCCGAGGAGAAGTGAGAGCAGCTCTGCATGGCGATaGAGGTCACCTGGGAGAGACCACAGCCTCGCCCAC +
Preference number: 3 (lower is better)
Translates to: FPRRSESSSAWR*RSPGRDHSLAH
Trigger: GTGGGCGAGGCTGTGGTCTCTCCCAGGTGACCTCCATCGCCATGCAGAGCTGCTCTCACTTCTCCTCGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCATGCAGGAGGGACTCCTaGGTCCTGAGGGACTCTGTG +
Preference number: 3 (lower is better)
Translates to: TAPVPAPSILQSLLHSTACRRDS*VLRDSV
Trigger: CACAGAGTCCCTCAGGACCAAGGAGTCCCTCCTGCA...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CAA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTGCTCCTGACAGGGCTTaGTCTCCCTGGGAAGGAATC +
Preference number: 3 (lower is better)
Translates to: QKPPAVAPISPADSLRGPAPDRA*SPWEGI
Trigger: GATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGC...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CAA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATTCCAGCACTGTCATATaGCTGGCCCCCTTCCCTCCG +
Preference number: 3 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHSSTVI*LAPFPP
Trigger: CGGAGGGAAGGGGGCCAGCAATATGACAGTGCTGGA...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp TCCATTACCCACCTGCCTTCCGGAGCTCATCTCACCTaGCTCAGGGAGTGGGGCAGCGCCTGTGACAGGTGT +
Preference number: 3 (lower is better)
Translates to: SITHLPSGAHLT*LREWGSACDRC
Trigger: ACACCTGTCACAGGCGCTGCCCCACTCCCTGAGTCAGGTGAGATGAGCTCCGGAAGGCAGGTGGGTAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp CTGGTTCAGCGGCTACGTCCAGCACTGTCATATTGCTaGCCCCCTTCCCTCCGGGAATCCCACATGCACCTC +
Preference number: 3 (lower is better)
Translates to: LVQRLRPALSYC*PPSLRESHMHL
Trigger: GAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGCAATATGACAGTGCTGGACGTAGCCGCTGAACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp AGTGGGCAGACCTGCATGCAGATGGCAGCGCTGAGCTaGGGGACAGGCTTTGCCAACTCACTGCTACAGTCC +
Preference number: 3 (lower is better)
Translates to: SGQTCMQMAALS*GTGFANSLLQS
Trigger: GGACTGTAGCAGTGAGTTGGCAAAGCCTGTCCCCCAGCTCAGCGCTGCCATCTGCATGCAGGTCTGCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp AGACCACAGCCTCGCCCACCGCTCCCTTTGCAAAGCTaGTCACAACTGACCGCACCTCCACCAGATTCGTGC +
Preference number: 3 (lower is better)
Translates to: RPQPRPPLPLQS*SQLTAPPPDSC
Trigger: GCACGAATCTGGTGGAGGTGCGGTCAGTTGTGACCAGCTTTGCAAAGGGAGCGGTGGGCGAGGCTGTGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp TGGCCTTTCCCGAGGAGAAGTGAGAGCAGCTCTGCATaGCGATGGAGGTCACCTGGGAGAGACCACAGCCTC +
Preference number: 3 (lower is better)
Translates to: WPFPRRSESSSA*RWRSPGRDHSL
Trigger: GAGGCTGTGGTCTCTCCCAGGTGACCTCCATCGCCATGCAGAGCTGCTCTCACTTCTCCTCGGGAAAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp AGACACCCAGGCCTAGTGAAGCCGGGCTTATGGGCCTaGAGCCTATGGCATCCAAGGCGCAGAACTGCAACG +
Preference number: 3 (lower is better)
Translates to: RHPGLVKPGLWA*SLWHPRRRTAT
Trigger: CGTTGCAGTTCTGCGCCTTGGATGCCATAGGCTCCAGGCCCATAAGCCCGGCTTCACTAGGCCTGGGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGGCTGAGATCGCACCATaGCATTCCAGCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: KAGGRARACTHKSPQMPPAEIAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAATGCAATGGTGCGATCTCAGC...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATATCACCCTGTGGGGATaGAGCCCTGTGCTGCTGAAC +
Preference number: 3 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHITLWG*SPVLLN
Trigger: GTTCAGCAGCACAGGGCTCAATCCCCACAGGGTGAT...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGGAGGGCACCCCCATGTaGCTCATCTGCTGGCTCCCC +
Preference number: 3 (lower is better)
Translates to: EAPVADDGCHPPSSLSNREGTPM*LICWLP
Trigger: GGGGAGCCAGCAGATGAGCAACATGGGGGTGCCCTC...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp GGCCCAGATGAGCGGGATCAGACTGTGTACAGGGTGTaGCAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCT +
Preference number: 3 (lower is better)
Translates to: GPDERDQTVYRV*QKPPAVAPISP
Trigger: AGGGCTGATGGGAGCTACTGCCGGAGGCTTTTGTCACACCCTGTACACAGTCTGATCCCGCTCATCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR GCA 72 bp GGAACAGCACCAGACACAGTGAGGGCACCCCCATGTTaGTCATCTGCTGGCTCCCCATTAGCACAGCCTGTC +
Preference number: 3 (lower is better)
Translates to: GTAPDTVRAPPC*SSAGSPLAQPV
Trigger: GACAGGCTGTGCTAATGGGGAGCCAGCAGATGAGCAACATGGGGGTGCCCTCACTGTGTCTGGTGCTGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp GGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCCTaGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGT +
Preference number: 3 (lower is better)
Translates to: GGLQALRKFSMS*EGLQVPGRVLC
Trigger: ACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CAA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCCGGCTTCCTTCTGTGTaGGGTGTGGGCATCATAAGG +
Preference number: 3 (lower is better)
Translates to: ESRGQADCLCGRGARGRSRLPSV*GVGIIR
Trigger: CCTTATGATGCCCACACCCAACACAGAAGGAAGCCG...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGAATCACCCTGTGGGGATaGAGCCCTGTGCTGCTGAAC +
Preference number: 3 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGITLWG*SPVLLN
Trigger: GTTCAGCAGCACAGGGCTCAATCCCCACAGGGTGAT...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCTGGAGGTGGTCCTGTTaGTGTTCTGCCTGGGCATCT +
Preference number: 3 (lower is better)
Translates to: ESRGQADCLCGRGARGRSWRWSC*CSAWAS
Trigger: AGATGCCCAGGCAGAACACAAACAGGACCACCTCCA...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGACGCCCACCGCTCCCTTaGCAAAGCTGGTCACAACTG +
Preference number: 3 (lower is better)
Translates to: LLCHTARKQESQIQAFRGRPPLP*QSWSQL
Trigger: CAGTTGTGACCAGCTTTGCAAAGGGAGCGGTGGGCG...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCTGCAGGAGGGACTCCTaGGTCCTGAGGGACTCTGTG +
Preference number: 3 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESCRRDS*VLRDSV
Trigger: CACAGAGTCCCTCAGGACCAAGGAGTCCCTCCTGCA...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGACCAAGGATTCCCATTTaGGGAGCCTGGAGACAGGCC +
Preference number: 3 (lower is better)
Translates to: LLCHTARKQESQIQAFRGPRIPI*GAWRQA
Trigger: GGCCTGTCTCCAGGCTCCCAAAATGGGAATCCTTGG...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp AAAGGCTCCACACCTGCAGGAGGGACTCCTTGGTCCTaGGGGACTCTGTGCCTGCATAGGCTCCAGTCCTTA +
Preference number: 3 (lower is better)
Translates to: KGSTPAGGTPWS*GTLCLHRLQSL
Trigger: TAAGGACTGGAGCCTATGCAGGCACAGAGTCCCTCAGGACCAAGGAGTCCCTCCTGCAGGTGTGGAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR TCA 72 bp TCTGCTGGGTGCCTGCTATTGGCAGCACTTGCTGCATaGGGTGCTGGTAGGAAGGAGGCAGAGTCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: SAGCLLLAALAA*GAGRKEAESCS
Trigger: AGAGCAGGACTCTGCCTCCTTCCTACCAGCACCTCATGCAGCAAGTGCTGCCAATAGCAGGCACCCAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp AAGTGGAAGAGCTGGGGCTTGGACCCTAGTCCCGTCTaGCTCCAGGGCCATCCTCATCTTCTCTGCCACACA +
Preference number: 3 (lower is better)
Translates to: KWKSWGLDPSPV*LQGHPHLLCHT
Trigger: TGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGACTAGGGTCCAAGCCCCAGCTCTTCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp CATGCAGATGGCAGCGCTGAGCTGGGGGACAGGCTTTaGCAACTCACTGCTACAGTCCATCCTTGTCTGGCA +
Preference number: 3 (lower is better)
Translates to: HADGSAELGDRL*QLTATVHPCLA
Trigger: TGCCAGACAAGGATGGACTGTAGCAGTGAGTTGGCAAAGCCTGTCCCCCAGCTCAGCGCTGCCATCTGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATaGCTCCGCCAGGCCCACTTGGTCTTACTGTTAGAG +
Preference number: 3 (lower is better)
Translates to: DGPEPAHTKALK*LRQAHLVLLLE
Trigger: CTCTAACAGTAAGACCAAGTGGGCCTGGCGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GCAGGTGGTAGGATGCCGCAGGGCCAGTGGGCTGTGTaGAGATATGACAAATGTCTCCTGTGGCTCAGAGCA +
Preference number: 3 (lower is better)
Translates to: AGGRMPQGQWAV*RYDKCLLWLRA
Trigger: TGCTCTGAGCCACAGGAGACATTTGTCATATCTGCACACAGCCCACTGGCCCTGCGGCATCCTACCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp GTCAGGAGACAACCAAGGATTCCCATTTTGGGAGCCTaGAGACAGGCCTGGTTCAGCGGCTACGTCCAGCAC +
Preference number: 3 (lower is better)
Translates to: VRRQPRIPILGA*RQAWFSGYVQH
Trigger: GTGCTGGACGTAGCCGCTGAACCAGGCCTGTCTCCAGGCTCCCAAAATGGGAATCCTTGGTTGTCTCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGACGGCTTCCTTCTGTGTaGGGTGTGGGCATCATAAGG +
Preference number: 3 (lower is better)
Translates to: LLCHTARKQESQIQAFRGRLPSV*GVGIIR
Trigger: CCTTATGATGCCCACACCCAACACAGAAGGAAGCCG...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCCTTCTCACTACTCACTaGGCCACACCATTCTCTGCT +
Preference number: 3 (lower is better)
Translates to: ESRGQADCLCGRGARGRSLLTTH*ATPFSA
Trigger: AGCAGAGAATGGTGTGGCCAAGTGAGTAGTGAGAAG...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGATGTGGTCACTGCACTTaGTCCTCCAAGGTCTCCCAA +
Preference number: 3 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGCGHCT*SSKVSQ
Trigger: TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACA...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp GGAGGGGGAGGTGTCCAAAGTCACCGAGTGAGTGAATaGATGACTGCAAACTCCATGAGGGCAGGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: GGGGVQSHRVSE*MTANSMRAGAR
Trigger: CCTGGCTCCTGCCCTCATGGAGTTTGCAGTCATTCATTCACTCACTCGGTGACTTTGGACACCTCCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp CCCTGTGCTGCTGAACATGCCCCAGGCAGCTGCAAGTaGTCAGGGGTCTCAGTCCAGTCGTATGTACAGATA +
Preference number: 3 (lower is better)
Translates to: PCAAEHAPGSCK*SGVSVQSYVQI
Trigger: TATCTGTACATACGACTGGACTGAGACCCCTGAGCACTTGCAGCTGCCTGGGGCATGTTCAGCAGCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp CGTGTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTaGCTCATCTCTGTAGCTCCCACAGCATGTTCCCTA +
Preference number: 3 (lower is better)
Translates to: RVSSFRAGFSRV*LISVAPTACSL
Trigger: TAGGGAACATGCTGTGGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp GAGTCGTGCATTCGCTATCTGCTGGGTGCCTGCTATTaGCAGCACTTGCTGCATGAGGTGCTGGTAGGAAGG +
Preference number: 3 (lower is better)
Translates to: ESCIRYLLGACY*QHLLHEVLVGR
Trigger: CCTTCCTACCAGCACCTCATGCAGCAAGTGCTGCCAATAGCAGGCACCCAGCAGATAGCGAATGCACGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp GAAATCCTGCACAGGCTCTGGAGAAAGCTGGTGTCATaGAGGACACTGGAGCCCTTGTCCAGGAGGTGGCTA +
Preference number: 3 (lower is better)
Translates to: EILHRLWRKLVS*RTLEPLSRRWL
Trigger: TAGCCACCTCCTGGACAAGGGCTCCAGTGTCCTCCATGACACCAGCTTTCTCCAGAGCCTGTGCAGGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACGCAGCAACTCATGCCTaGTCTGTCAAAACCCAGAGC +
Preference number: 3 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHAATHA*SVKTQS
Trigger: GCTCTGGGTTTTGACAGACAAGGCATGAGTTGCTGC...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAGCAGCAACTCATGCCTaGTCTGTCAAAACCCAGAGC +
Preference number: 3 (lower is better)
Translates to: LLCHTARKQESQIQAFRGAATHA*SVKTQS
Trigger: GCTCTGGGTTTTGACAGACAAGGCATGAGTTGCTGC...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATGTCCAAATTCTTCAGTaGAATCCTCAAGGCCCTCCA +
Preference number: 3 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHVQILQ*NPQGPP
Trigger: TGGAGGGCCTTGAGGATTCAACTGAAGAATTTGGAC...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATAGAGCTATGGGAGGTTaGGCTTTCTTTATCCTGACC +
Preference number: 3 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHRAMGG*AFFILT
Trigger: GGTCAGGATAAAGAAAGCCAAACCTCCCATAGCTCT...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp ATCCTCCCCTCAGTGACGTCCACAGAACTGCAGCGCTaGGAAGGCCAGATTGCAGATCTGAAGTCCAACTCC +
Preference number: 3 (lower is better)
Translates to: ILPSVTSTELQR*EGQIADLKSNS
Trigger: GGAGTTGGACTTCAGATCTGCAATCTGGCCTTCTCAGCGCTGCAGTTCTGTGGACGTCACTGAGGGGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp GAGAGGAGGGGGAGGTGTCCAAAGTCACCGAGTGAGTaGATGAATGACTGCAAACTCCATGAGGGCAGGAGC +
Preference number: 3 (lower is better)
Translates to: ERRGRCPKSPSE*MNDCKLHEGRS
Trigger: GCTCCTGCCCTCATGGAGTTTGCAGTCATTCATTCACTCACTCGGTGACTTTGGACACCTCCCCCTCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp CATATTGCTGGCCCCCTTCCCTCCGGGAATCCCACATaGACCTCAAACTGTCCAAAGTGGAGCTCATCTTCC +
Preference number: 3 (lower is better)
Translates to: HIAGPLPSGNPT*TSNCPKWSSSS
Trigger: GGAAGATGAGCTCCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGCAATATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GGCAAAGCTGGGTTTTGGAGTCGTGCATTCGCTATCTaGTGGGTGCCTGCTATTGGCAGCACTTGCTGCATG +
Preference number: 3 (lower is better)
Translates to: GKAGFWSRAFAI*WVPAIGSTCCM
Trigger: CATGCAGCAAGTGCTGCCAATAGCAGGCACCCAGCAGATAGCGAATGCACGACTCCAAAACCCAGCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp ACTACAGCCAGGAGGCAAAGCTGGGTTTTGGAGTCGTaGATTCGCTATCTGCTGGGTGCCTGCTATTGGCAG +
Preference number: 3 (lower is better)
Translates to: TTARRQSWVLES*IRYLLGACYWQ
Trigger: CTGCCAATAGCAGGCACCCAGCAGATAGCGAATGCACGACTCCAAAACCCAGCTTTGCCTCCTGGCTGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp GCACACCTGAGACGTGTACCTGCTATTCCAATTTCCTaGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCA +
Preference number: 3 (lower is better)
Translates to: AHLRRVPAIPIS*DLGFLLCWVWA
Trigger: TGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGGAAATTGGAATAGCAGGTACACGTCTCAGGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR CCA 72 bp CCAAGGATTCCCATTTTGGGAGCCTGGAGACAGGCCTaGTTCAGCGGCTACGTCCAGCACTGTCATATTGCT +
Preference number: 3 (lower is better)
Translates to: PRIPILGAWRQA*FSGYVQHCHIA
Trigger: AGCAATATGACAGTGCTGGACGTAGCCGCTGAACCAGGCCTGTCTCCAGGCTCCCAAAATGGGAATCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp CTGAGAACATTGTTAACAAGTGGAAGAGCTGGGGCTTaGACCCTAGTCCCGTCTGACTCCAGGGCCATCCTC +
Preference number: 3 (lower is better)
Translates to: LRTLLTSGRAGA*TLVPSDSRAIL
Trigger: GAGGATGGCCCTGGAGTCAGACGGGACTAGGGTCCAAGCCCCAGCTCTTCCACTTGTTAACAATGTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGTGCAGGAGGGACTCCTaGGTCCTGAGGGACTCTGTG +
Preference number: 3 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRCRRDS*VLRDSV
Trigger: CACAGAGTCCCTCAGGACCAAGGAGTCCCTCCTGCA...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CAA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGGCTCCTGACAGGGCTTaGTCTCCCTGGGAAGGAATC +
Preference number: 3 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALAPDRA*SPWEGI
Trigger: GATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGC...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGCATGTCTTCGCACCCTaGTATGTATTGTGCTGTTCT +
Preference number: 3 (lower is better)
Translates to: KAGGRARACTHKSPQMPPHVFAP*YVLCCS
Trigger: AGAACAGCACAATACATACAAGGGTGCGAAGACATG...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACGATAAGACTGTCGCATaGTTCTACGGGGTTGTGACG +
Preference number: 3 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHDKTVA*FYGVVT
Trigger: CGTCACAACCCCGTAGAACAATGCGACAGTCTTATC...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCCTGAGGCTGAGAACATaGTTAACAAGTGGAAGAGCT +
Preference number: 3 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGLRLRT*LTSGRA
Trigger: AGCTCTTCCACTTGTTAACAATGTTCTCAGCCTCAG...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp AAATGCAGTCAGGTGGTTTCCCACCCTTGGCCTGCTTaGAACCCCCACGCCTGTGTCCAGTGTCAGAATTTG +
Preference number: 3 (lower is better)
Translates to: KCSQVVSHPWPA*NPHACVQCQNL
Trigger: CAAATTCTGACACTGGACACAGGCGTGGGGGTTTCAAGCAGGCCAAGGGTGGGAAACCACCTGACTGCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GAGCACTGTAACCTGGAGGTGGTCCTGTTTGTGTTCTaGCTGGGCATCTACTCCGTGAATGTGTTGGGGAAC +
Preference number: 3 (lower is better)
Translates to: EHCNLEVVLFVF*LGIYSVNVLGN
Trigger: GTTCCCCAACACATTCACGGAGTAGATGCCCAGGCAGAACACAAACAGGACCACCTCCAGGTTACAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp CAAGGAACACTAGGTGAGCATCATCCATTACCCACCTaGCTTCCGGAGCTCATCTCACCTGACTCAGGGAGT +
Preference number: 3 (lower is better)
Translates to: QGTLGEHHPLPT*LPELISPDSGS
Trigger: ACTCCCTGAGTCAGGTGAGATGAGCTCCGGAAGGCAGGTGGGTAATGGATGATGCTCACCTAGTGTTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GTTTTGGAGTCGTGCATTCGCTATCTGCTGGGTGCCTaGTATTGGCAGCACTTGCTGCATGAGGTGCTGGTA +
Preference number: 3 (lower is better)
Translates to: VLESCIRYLLGA*YWQHLLHEVLV
Trigger: TACCAGCACCTCATGCAGCAAGTGCTGCCAATAGCAGGCACCCAGCAGATAGCGAATGCACGACTCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp AGAAAAATGCAGTCAGGTGGTTTCCCACCCTTGGCCTaGTTGAAACCCCCACGCCTGTGTCCAGTGTCAGAA +
Preference number: 3 (lower is better)
Translates to: RKMQSGGFPPLA*LKPPRLCPVSE
Trigger: TTCTGACACTGGACACAGGCGTGGGGGTTTCAAGCAGGCCAAGGGTGGGAAACCACCTGACTGCATTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GTTCAACTCAAATGGCAATCACTGACACCTCCTGGCTaGGGGTCACTGGAGGGTGACAGTGATGAAGGACAC +
Preference number: 3 (lower is better)
Translates to: VQLKWQSLTPPG*GSLEGDSDEGH
Trigger: GTGTCCTTCATCACTGTCACCCTCCAGTGACCCGCAGCCAGGAGGTGTCAGTGATTGCCATTTGAGTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTaGGAAGGAATCCATGTCTTGGGAAGGCTCTGCATC +
Preference number: 3 (lower is better)
Translates to: ERCCAPDRALSP*EGIHVLGRLCI
Trigger: GATGCAGAGCCTTCCCAAGACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR CCA 72 bp CCATCTCGGACAAAGGTGCGGAGCTGGGAAAAGAGATaGTTTCTTCAGGAAAGGGTGAGCCCTGCAACTCGA +
Preference number: 3 (lower is better)
Translates to: PSRTKVRSWEKR*FLQERVSPATR
Trigger: TCGAGTTGCAGGGCTCACCCTTTCCTGAAGAAACCATCTCTTTTCCCAGCTCCGCACCTTTGTCCGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp AAAGCTGGGTTTTGGAGTCGTGCATTCGCTATCTGCTaGGTGCCTGCTATTGGCAGCACTTGCTGCATGAGG +
Preference number: 3 (lower is better)
Translates to: KAGFWSRAFAIC*VPAIGSTCCMR
Trigger: CCTCATGCAGCAAGTGCTGCCAATAGCAGGCACCCAGCAGATAGCGAATGCACGACTCCAAAACCCAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp CAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTaGAGCACACAGGCTTTGTCCAAAAGACAGGGAGTG +
Preference number: 3 (lower is better)
Translates to: QPEETAQEEGWD*STQALSKRQGV
Trigger: CACTCCCTGTCTTTTGGACAAAGCCTGTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp CAGTGGGCTGTGTGCAGATATGACAAATGTCTCCTGTaGCTCAGAGCAGCAAGAGCCTCCAGTGTGTCCTTC +
Preference number: 3 (lower is better)
Translates to: QWAVCRYDKCLL*LRAARASSVSF
Trigger: GAAGGACACACTGGAGGCTCTTGCTGCTCTGAGCCACAGGAGACATTTGTCATATCTGCACACAGCCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGCTCCTGACAGGGCTTaGTCTCCCTGGGAAGGAATC +
Preference number: 3 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGAPDRA*SPWEGI
Trigger: GATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGC...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CAA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGAACATCCTACAGCACTTaGTCAGGATCTTCCACTTCA +
Preference number: 3 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGTSYST*SGSSTS
Trigger: TGAAGTGGAAGATCCTGACAAAGTGCTGTAGGATGT...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAATGCATCCTTTCCCATaGCACTTTGAGATCGCTCTC +
Preference number: 3 (lower is better)
Translates to: LLCHTARKQESQIQAFRGMHPFP*HFEIAL
Trigger: GAGAGCGATCTCAAAGTGCAATGGGAAAGGATGCAT...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGGATAAGACTGTCGCATaGTTCTACGGGGTTGTGACG +
Preference number: 3 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRDKTVA*FYGVVT
Trigger: CGTCACAACCCCGTAGAACAATGCGACAGTCTTATC...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp GAACTGTCTGGACCTCTGACTGGGGACCAGATGGAATaGTGGAAATCCCGGGGATGGATGAAGTATGGACAC +
Preference number: 3 (lower is better)
Translates to: ELSGPLTGDQME*WKSRGWMKYGH
Trigger: GTGTCCATACTTCATCCATCCCCGGGATTTCCATCATTCCATCTGGTCCCCAGTCAGAGGTCCAGACAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp AATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTaGCTGGGGACCAGATGGAATGATGGAAATCCCGGG +
Preference number: 3 (lower is better)
Translates to: NLSASQMNCLDL*LGTRWNDGNPG
Trigger: CCCGGGATTTCCATCATTCCATCTGGTCCCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp GCTCCGTCTCCCACTTCAGAGCCTTCTGTACTCTGCTaGCTCTGTCCAGAATCCCAGCTATTTGGGTTCAAG +
Preference number: 3 (lower is better)
Translates to: APSPTSEPSVLC*LCPESQLFGFK
Trigger: CTTGAACCCAAATAGCTGGGATTCTGGACAGAGTCAGCAGAGTACAGAAGGCTCTGAAGTGGGAGACGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp TCACACTCAGCCTTCTTTCCTAACTGCTGGCCCAGCTaGGCTGTAACAGCTTCAGGCCCAACACCAAATGCA +
Preference number: 3 (lower is better)
Translates to: SHSAFFPNCWPS*AVTASGPTPNA
Trigger: TGCATTTGGTGTTGGGCCTGAAGCTGTTACAGCTCAGCTGGGCCAGCAGTTAGGAAAGAAGGCTGAGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp AGAGGCTTAAAGCCATTAAGGTTTGTTTCTTGCTCCTaGTGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGC +
Preference number: 3 (lower is better)
Translates to: RGLKPLRFVSCS*CRSTRGWWGFC
Trigger: GCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAGAAACAAACCTTAATGGCTTTAAGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp TGGAGCCTATGGCATCCAAGGCGCAGAACTGCAACGTaGCCCAGTATTCAGATTCTCTGTCCACTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: WSLWHPRRRTAT*PSIQILCPLSL
Trigger: GAGAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTGGATGCCATAGGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GGCACAGGTTCCAGTTTGTCCTTCTGGATTCTAGTGTaGCCTTACTGCCCCTCACTTCACACTCAGCCTTCT +
Preference number: 3 (lower is better)
Translates to: GTGSSLSFWILV*PYCPSLHTQPS
Trigger: AGAAGGCTGAGTGTGAAGTGAGGGGCAGTAAGGGCACACTAGAATCCAGAAGGACAAACTGGAACCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp TCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTaGCCAACACAATGGCAACAGGAAGGCACAGGACCA +
Preference number: 3 (lower is better)
Translates to: SEVAVLPPPTFQ*PTQWQQEGTGP
Trigger: TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGGCACCCTTGTATGTATaGTGCTGTTCTCTGATAATA +
Preference number: 3 (lower is better)
Translates to: KAGGRARACTHKSPQMPPAPLYV*CCSLII
Trigger: TATTATCAGAGAACAGCACAATACATACAAGGGTGC...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAAAGAGTTTTGTGTCCTaGAGAAAGACTCCATGTCCT +
Preference number: 3 (lower is better)
Translates to: LLCHTARKQESQIQAFRGKSFVS*RKTPCP
Trigger: AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTT...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGAAGAGTTTTGTGTCCTaGAGAAAGACTCCATGTCCT +
Preference number: 3 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQKSFVS*RKTPCP
Trigger: AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR-3UTR CAA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTGCAAGGAAGGGCTGTTaGAATCTTGGGATCTCCCCC +
Preference number: 3 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSARKGC*NLGISP
Trigger: GGGGGAGATCCCAAGATTCAAACAGCCCTTCCTTGC...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACAGGGTGTGGGTTAGGGTaGGCCACAGAGAAGTTTGCA +
Preference number: 3 (lower is better)
Translates to: FDESRSLRQSWKETPHFTGCGLG*ATEKFA
Trigger: TGCAAACTTCTCTGTGGCCAACCCTAACCCACACCC...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTGGGTGTGGGTTAGGGTaGGCCACAGAGAAGTTTGCA +
Preference number: 3 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSGCGLG*ATEKFA
Trigger: TGCAAACTTCTCTGTGGCCAACCCTAACCCACACCC...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCATTTCAGGTTTTACTTaGTCTTTACATCCCAGACTC +
Preference number: 3 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGISGFT*SLHPRL
Trigger: GAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAAT...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp TGTGTGACCATCTTGTTGTCCGGGTGGTCAGTTTTATaGAGCCATCTGAGAGAAGGCTGCACGAGACAGTGG +
Preference number: 3 (lower is better)
Translates to: CVTILLSGWSVL*SHLREGCTRQW
Trigger: CCACTGTCTCGTGCAGCCTTCTCTCAGATGGCTTCATAAAACTGACCACCCGGACAACAAGATGGTCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GTAAATATCAGTCTTTCCTGCCTCTGCATTCCCCCTTaGTGTTCCCTCTCCATGTCCAAACACGTGGTGACC +
Preference number: 3 (lower is better)
Translates to: VNISLSCLCIPP*CSLSMSKHVVT
Trigger: GGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGGGGAATGCAGAGGCAGGAAAGACTGATATTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp TCAGTGCCCGGAGTAAATATCAGTCTTTCCTGCCTCTaGATTCCCCCTTGCTGTTCCCTCTCCATGTCCAAA +
Preference number: 3 (lower is better)
Translates to: SVPGVNISLSCL*IPPCCSLSMSK
Trigger: TTTGGACATGGAGAGGGAACAGCAAGGGGGAATGCAGAGGCAGGAAAGACTGATATTTACTCCGGGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp GAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTaGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGT +
Preference number: 3 (lower is better)
Translates to: EVLHVLGRAPGP*KSFVSLRKTPC
Trigger: ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR CCA 72 bp TGGCTCATCTCTGTAGCTCCCACAGCATGTTCCCTATaGAAGGTTTGCGGGACTGAATTGTCACTCAGAAGC +
Preference number: 3 (lower is better)
Translates to: WLISVAPTACSL*KVCGTELSLRS
Trigger: GCTTCTGAGTGACAATTCAGTCCCGCAAACCTTCCATAGGGAACATGCTGTGGGAGCTACAGAGATGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCATGCATCCTTTCCCATaGCACTTTGAGATCGCTCTC +
Preference number: 3 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLMHPFP*HFEIAL
Trigger: GAGAGCGATCTCAAAGTGCAATGGGAAAGGATGCAT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCACATGTCTTCGCACCCTaGTATGTATTGTGCTGTTCT +
Preference number: 3 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPHVFAP*YVLCCS
Trigger: AGAACAGCACAATACATACAAGGGTGCGAAGACATG...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGCCTCGTGTGACATCATaGTCAGTATCATTTCTCCTA +
Preference number: 3 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRPRVTS*SVSFLL
Trigger: TAGGAGAAATGATACTGACAATGATGTCACACGAGG...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp GAGATTTGTGAATGGCCTAATGACTACCACACCAGCTaGCAGTGTCAACCCAAGAGCTATGGGAGGTTTGGC +
Preference number: 3 (lower is better)
Translates to: EICEWPNDYHTS*QCQPKSYGRFG
Trigger: GCCAAACCTCCCATAGCTCTTGGGTTGACACTGTCAGCTGGTGTGGTAGTCATTAGGCCATTCACAAATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp CCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTaGCATCATTGTCAGTATCATTTCTCCTACAAAGCA +
Preference number: 3 (lower is better)
Translates to: PPPDSCLASLLV*HHCQYHFSYKA
Trigger: TGCTTTGTAGGAGAAATGATACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp GGAGCTGGGAAAAGAGATGGTTTCTTCAGGAAAGGGTaGGCCCTGCAACTCGACAAATCGTGGATACAACGA +
Preference number: 3 (lower is better)
Translates to: GAGKRDGFFRKG*ALQLDKSWIQR
Trigger: TCGTTGTATCCACGATTTGTCGAGTTGCAGGGCTCACCCTTTCCTGAAGAAACCATCTCTTTTCCCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp CTCCGCCAGGCCCACTTGGTCTTACTGTTAGAGGTGTaGGTGATAAAGAAAAATGCAGTCAGGTGGTTTCCC +
Preference number: 3 (lower is better)
Translates to: LRQAHLVLLLEV*VIKKNAVRWFP
Trigger: GGGAAACCACCTGACTGCATTTTTCTTTATCACTCACACCTCTAACAGTAAGACCAAGTGGGCCTGGCGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp AGACCACAGGGAGTGATGAAAATCTCAGGGAAGGGATaGCATGTGGACACTGGTGACCACAAAGAACACTCT +
Preference number: 3 (lower is better)
Translates to: RPQGVMKISGKG*HVDTGDHKEHS
Trigger: AGAGTGTTCTTTGTGGTCACCAGTGTCCACATGGCATCCCTTCCCTGAGATTTTCATCACTCCCTGTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp AAGTGCAAGCTCCATGGCAAAGGTGACAGCTTCTCCTaGAGGTCACCAGTCACTGAGATTGAAGGCATAAGA +
Preference number: 3 (lower is better)
Translates to: KCKLHGKGDSFS*RSPVTEIEGIR
Trigger: TCTTATGCCTTCAATCTCAGTGACTGGTGACCTGCAGGAGAAGCTGTCACCTTTGCCATGGAGCTTGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GAGTCTCTGAAGCCCAGGTCCCACAGCTGCCAAGCCTaGAACTTTGTGCAGTTGCAGAGTTTGAACTTTAAA +
Preference number: 3 (lower is better)
Translates to: ESLKPRSHSCQA*NFVQLQSLNFK
Trigger: TTTAAAGTTCAAACTCTGCAACTGCACAAAGTTGCAGGCTTGGCAGCTGTGGGACCTGGGCTTCAGAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp GAAATTTGGTTTCCCCAAGATAGACTCCACCTCCTCTaGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTC +
Preference number: 3 (lower is better)
Translates to: EIWFPQDRLHLL*KDAVLLTGLCL
Trigger: GAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAGGAGGTGGAGTCTATCTTGGGGAAACCAAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR CCA 72 bp CTCACTTGGCCACACCATTCTCTGCTCAGTGCCCCATaGAAGAGACGTGATTGCAGAAAGCAGATAACAAAG +
Preference number: 3 (lower is better)
Translates to: LTWPHHSLLSAP*KRRDCRKQITK
Trigger: CTTTGTTATCTGCTTTCTGCAATCACGTCTCTTCCATGGGGCACTGAGCAGAGAATGGTGTGGCCAAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAGCAGAAGTAACAGTTTaGCACAGATTTCTCCAACTG +
Preference number: 3 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVAEVTV*HRFLQL
Trigger: CAGTTGGAGAAATCTGTGCAAAACTGTTACTTCTGC...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAACTAGGGAGGATCGCTaGAACTTGGGAGGTGGAGGC +
Preference number: 3 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKTREDR*NLGGGG
Trigger: GCCTCCACCTCCCAAGTTCAAGCGATCCTCCCTAGT...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAAGGTGTGGAATCCTTTaGTCCACTTACTTTCCTTAC +
Preference number: 3 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVRCGIL*STYFPY
Trigger: GTAAGGAAAGTAAGTGGACAAAAGGATTCCACACCT...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp TGGAAATCCCGGGGATGGATGAAGTATGGACACTGGTaGTCAGTGAGAATGCTCTCCCAACTTCTTGGCATT +
Preference number: 3 (lower is better)
Translates to: WKSRGWMKYGHW*SVRMLSQLLGI
Trigger: AATGCCAAGAAGTTGGGAGAGCATTCTCACTGATCACCAGTGTCCATACTTCATCCATCCCCGGGATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp AAGGAAGGGCTGTTTGAATCTTGGGATCTCCCCCACTaGGACAAGTCAGGAGACAACCAAGGATTCCCATTT +
Preference number: 3 (lower is better)
Translates to: KEGLFESWDLPH*DKSGDNQGFPF
Trigger: AAATGGGAATCCTTGGTTGTCTCCTGACTTGTCTCAGTGGGGGAGATCCCAAGATTCAAACAGCCCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp GAAATATTTGATCTTCATGGCCCAAGGAACACTAGGTaGGCATCATCCATTACCCACCTGCCTTCCGGAGCT +
Preference number: 3 (lower is better)
Translates to: EIFDLHGPRNTR*ASSITHLPSGA
Trigger: AGCTCCGGAAGGCAGGTGGGTAATGGATGATGCTCACCTAGTGTTCCTTGGGCCATGAAGATCAAATATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp TCAAAACCCAGAGCAGAAACAGCTTCAAGGTGTGTCTaGATAGCCAAGGCCTTAGACAACTTTACGGGTCTC +
Preference number: 3 (lower is better)
Translates to: SKPRAETASRCV*IAKALDNFTGL
Trigger: GAGACCCGTAAAGTTGTCTAAGGCCTTGGCTATGCAGACACACCTTGAAGCTGTTTCTGCTCTGGGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp TCTGTAGCTCCCACAGCATGTTCCCTATGGAAGGTTTaGGGGACTGAATTGTCACTCAGAAGCTTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: SVAPTACSLWKV*GTELSLRSFQN
Trigger: GTTCTGAAAGCTTCTGAGTGACAATTCAGTCCCGCAAACCTTCCATAGGGAACATGCTGTGGGAGCTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp TCCAGTTTGTCCTTCTGGATTCTAGTGTGCCCTTACTaGCCCTCACTTCACACTCAGCCTTCTTTCCTAACT +
Preference number: 3 (lower is better)
Translates to: SSLSFWILVCPY*PSLHTQPSFLT
Trigger: AGTTAGGAAAGAAGGCTGAGTGTGAAGTGAGGGGCAGTAAGGGCACACTAGAATCCAGAAGGACAAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GGCTTTCTTTATCCTGACCATCTATCCTTCACGGGCTaGTGCCAAGTTAATCGTCCCAAGAAAGCTCTGGTT +
Preference number: 3 (lower is better)
Translates to: GFLYPDHLSFTG*CQVNRPKKALV
Trigger: AACCAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTCAGGATAAAGAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp GATGGAATGATGGAAATCCCGGGGATGGATGAAGTATaGACACTGGTGATCAGTGAGAATGCTCTCCCAACT +
Preference number: 3 (lower is better)
Translates to: DGMMEIPGMDEV*TLVISENALPT
Trigger: AGTTGGGAGAGCATTCTCACTGATCACCAGTGTCCATACTTCATCCATCCCCGGGATTTCCATCATTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCTCTGATCAAGGACTTTaGACAGCTCCCATTACCATT +
Preference number: 3 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLSDQGL*TAPITI
Trigger: AATGGTAATGGGAGCTGTCAAAAGTCCTTGATCAGA...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCCAGAAAGTAAGTTGCTaGGCTTTCATGACCACAGTT +
Preference number: 3 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLQKVSC*AFMTTV
Trigger: AACTGTGGTCATGAAAGCCAAGCAACTTACTTTCTG...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp ACACCATTCTCTGCTCAGTGCCCCATGGAAGAGACGTaGTTGCAGAAAGCAGATAACAAAGGCATGTTTTCC +
Preference number: 3 (lower is better)
Translates to: TPFSAQCPMEET*LQKADNKGMFS
Trigger: GGAAAACATGCCTTTGTTATCTGCTTTCTGCAATCACGTCTCTTCCATGGGGCACTGAGCAGAGAATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp CCGCACCCCCATGTCTTCGCACCCTTGTATGTATTGTaGTGTTCTCTGATAATAGCTGGGACTAGTTTTCAA +
Preference number: 3 (lower is better)
Translates to: PHPHVFAPLYVL*CSLIIAGTSFQ
Trigger: TTGAAAACTAGTCCCAGCTATTATCAGAGAACAGCACAATACATACAAGGGTGCGAAGACATGGGGGTGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp TTTCTTTATCCTGACCATCTATCCTTCACGGGCTGCTaGCAAGTTAATCGTCCCAAGAAAGCTCTGGTTAGC +
Preference number: 3 (lower is better)
Translates to: FLYPDHLSFTGC*QVNRPKKALVS
Trigger: GCTAACCAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTCAGGATAAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp AAGCCTACACTGACTCTTAAAGCTTCTACTCAGAAGTaGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAA +
Preference number: 3 (lower is better)
Translates to: KPTLTLKASTQK*LCCLHLHFSGQ
Trigger: TTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTTTAAGAGTCAGTGTAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTGCTGAGATCGCACCATaGCATTCCAGCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESAEIAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAATGCAATGGTGCGATCTCAGC...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTACTAGGGAGGATCGCTaGAACTTGGGAGGTGGAGGC +
Preference number: 3 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESTREDR*NLGGGG
Trigger: GCCTCCACCTCCCAAGTTCAAGCGATCCTCCCTAGT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp TCCAGAATCCCAGCTATTTGGGTTCAAGCATCCCAGTaGCCTGGCTCTATACGTCTTAATGTGGTATTTCTG +
Preference number: 3 (lower is better)
Translates to: SRIPAIWVQASQ*PGSIRLNVVFL
Trigger: CAGAAATACCACATTAAGACGTATAGAGCCAGGTCACTGGGATGCTTGAACCCAAATAGCTGGGATTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp TCTCCTACAAAGCAATATGGAGGCCAGAAAGTAAGTTaGTTGGCTTTCATGACCACAGTTCAGTCCTGTGAC +
Preference number: 3 (lower is better)
Translates to: SPTKQYGGQKVS*LAFMTTVQSCD
Trigger: GTCACAGGACTGAACTGTGGTCATGAAAGCCAAGCAACTTACTTTCTGGCCTCCATATTGCTTTGTAGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp CTATTGTTAAGGGGGAAAAGCACACTATCGTGTGTCTaGATGGCAAACGAGAGGGACAGAGAGATTTGTGAA +
Preference number: 3 (lower is better)
Translates to: LLLRGKSTLSCV*MANERDREICE
Trigger: TTCACAAATCTCTCTGTCCCTCTCGTTTGCCATCCAGACACACGATAGTGTGCTTTTCCCCCTTAACAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp AGACATTTTTCCAGTTCTAACAAGACTACTGTTCTCTaGACACACCTGGGCTTCCTCCTAGGAATACCTGAC +
Preference number: 3 (lower is better)
Translates to: RHFSSSNKTTVL*THLGFLLGIPD
Trigger: GTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCAGAGAACAGTAGTCTTGTTAGAACTGGAAAAATGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp ATTAGAAACTGTTTAGAAATGAATGCAGGGCCCAGATaGGCGGGATCAGACTGTGTACAGGGTGTGACAAAA +
Preference number: 3 (lower is better)
Translates to: IRNCLEMNAGPR*AGSDCVQGVTK
Trigger: TTTTGTCACACCCTGTACACAGTCTGATCCCGCTCATCTGGGCCCTGCATTCATTTCTAAACAGTTTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR TCA 72 bp TTCTTGGCATTATGTAAGACCCTCAGAACTCAGCTATaGCCCTCATGGAAAGAGAAGGAATCCCAAATGGAC +
Preference number: 3 (lower is better)
Translates to: FLALCKTLRTQL*PSWKEKESQMD
Trigger: GTCCATTTGGGATTCCTTCTCTTTCCATGAGGGTCATAGCTGAGTTCTGAGGGTCTTACATAATGCCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp ACTGACCAAGATTACCCAAGTGCCCCTATATGTTCCTaGAACTGTCCTTTAAGAATCACCCTGATTCAGGGT +
Preference number: 3 (lower is better)
Translates to: TDQDYPSAPICS*NCPLRITLIQG
Trigger: ACCCTGAATCAGGGTGATTCTTAAAGGACAGTTTCAGGAACATATAGGGGCACTTGGGTAATCTTGGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CCA 72 bp TGGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATaGTTTCGTGTGCTGGTTCTAGTTTCCATGAATGTG +
Preference number: 3 (lower is better)
Translates to: WTQSYFFRATSQ*FRVLVLVSMNV
Trigger: CACATTCATGGAAACTAGAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCATTTCAGGTTTTACTTaGTCTTTACATCCCAGACTC +
Preference number: 3 (lower is better)
Translates to: GHRVISLGPQANGFVCWFISGFT*SLHPRL
Trigger: GAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAAT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp ATTTACCAGACAATGAGACTGATATGTCAGTTAGCTTaGAAAGTAACCCTGGGTCTATCAGACCTCAGGTTG +
Preference number: 3 (lower is better)
Translates to: IYQTMRLICQLA*KVTLGLSDLRL
Trigger: CAACCTGAGGTCTGATAGACCCAGGGTTACTTTGCAAGCTAACTGACATATCAGTCTCATTGTCTGGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTTACTCCGTGAATGTGTaGGGGAACGCCCTCCTCATA +
Preference number: 3 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIYSVNV*GNALLI
Trigger: TATGAGGAGGGCGTTCCCCAACACATTCACGGAGTA...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp AAGTTGCTTGGCTTTCATGACCACAGTTCAGTCCTGTaGCCAGTAACTCTATTGAGACATGTACGTTCTTAT +
Preference number: 3 (lower is better)
Translates to: KLLGFHDHSSVL*PVTLLRHVRSY
Trigger: ATAAGAACGTACATGTCTCAATAGAGTTACTGGTCACAGGACTGAACTGTGGTCATGAAAGCCAAGCAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR TCA 72 bp AGACTTTTAAGTTGTGAGGAAAACCCACCATGTTACTaGTGTAGCTCTTCAGAAAGAGCAGGTGTTACTGCA +
Preference number: 3 (lower is better)
Translates to: RLLSCEENPPCY*CSSSERAGVTA
Trigger: TGCAGTAACACCTGCTCTTTCTGAAGAGCTACATCAGTAACATGGTGGGTTTTCCTCACAACTTAAAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp CAGCTCTTAAATTGGTCCCCTCCTTTCCACCGATATTaGTTTAAGAAGGCTTCACCATTTCTCTTTCAAATG +
Preference number: 3 (lower is better)
Translates to: QLLNWSPPFHRY*FKKASPFLFQM
Trigger: CATTTGAAAGAGAAATGGTGAAGCCTTCTTAAAGCAATATCGGTGGAAAGGAGGGGACCAATTTAAGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR-3UTR CAA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTCTAACAGCTCTTAAATaGGTCCCCTCCTTTCCACCG +
Preference number: 3 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIILTALK*VPSFPP
Trigger: CGGTGGAAAGGAGGGGACCAATTTAAGAGCTGTTAG...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR GCA 72 bp GGCTCAAAACAGAAGTTACATTCTTGTGATATTTCTTaGACACCTGAGACGTGTACCTGCTATTCCAATTTC +
Preference number: 3 (lower is better)
Translates to: GSKQKLHSCDIS*TPETCTCYSNF
Trigger: GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATGTAACTTCTGTTTTGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
3UTR TCA 72 bp GTTGGGTGTGGGCATCATAAGGAAAGTCTGTCTCACTaGTTTAAATCATCTCAGCATACGTATACATACATA +
Preference number: 3 (lower is better)
Translates to: VGCGHHKESLSH*FKSSQHTYTYI
Trigger: TATGTATGTATACGTATGCTGAGATGATTTAAATCAGTGAGACAGACTTTCCTTATGATGCCCACACCCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGGCCAGCGGCGCCACGTaGGTGGGTAGCAGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEASGAT*VGSSAG
Trigger: GCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGC...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACCTCGGCCGTCGCGTTaGGGCACCGCACGAACCGAG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAPRPSR*GTARTE
Trigger: CTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCGCCGGCGGCGGACGCTaGGTACTGTCCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ESRGQADCLCGRGARGRSAGGGR*VLSRLW
Trigger: CCACAGCCTGGACAGTACGCAGCGTCCGCCGCCGGC...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTCACTGGGAATGGGGCTaGGACAGGGCCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPHWEWG*DRAWAG
Trigger: CCCAGCCCAGGCCCTGTCCCAGCCCCATTCCCAGTG...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR TCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTTGGCACAGATGCTGCTaGCAGTGGCCCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPWHRCC*QWPLLG
Trigger: GCCCAGGAGGGGCCACTGTCAGCAGCATCTGTGCCA...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACGCACTGGCCAGCAGTaGTCGGGTGGGGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTARTGQQ*SGGDVV
Trigger: GACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACAGAGTCGGGCGCACTaGCCAGCAGTGCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAQSRAH*PAVLGW
Trigger: CCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGCATGGCGAACACGGCTaGGCGCTCAGGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEHGEHG*ALRGKG
Trigger: GCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATG...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCCATGGCGAACACGGCTaGGCGCTCAGGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGHGEHG*ALRGKG
Trigger: GCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATG...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTACTGGAAGGGGGTCCTaGATGGGGACCCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPTGRGS*MGTQAG
Trigger: CCCTGCCTGGGTCCCCATCCAGGACCCCCTTCCAGT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGGGAGAGGGTTTGCTCTaGGGGCCGGCCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEGEGLL*GPARNQ
Trigger: CTGGTTCCTGGCCGGCCCTCAGAGCAAACCCTCTCC...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACTCCAGCTGGCATCCTaGGGCACCTCCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTALQLAS*GTSTGH
Trigger: GTGGCCTGTGGAGGTGCCTCAGGATGCCAGCTGGAG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATTGGCACAGATGCTGCTaGCAGTGGCCCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHWHRCC*QWPLLG
Trigger: GCCCAGGAGGGGCCACTGTCAGCAGCATCTGTGCCA...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGGGGGCAGTGGCTGGTTaGCCAGGGACTGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPGAVAG*PGTGAC
Trigger: ACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCC...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGGGGGCAGTGGCTGGTTaGCCAGGGACTGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEGAVAG*PGTGAC
Trigger: ACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCC...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGAGTGGCAGGGCGAGGTaGGGGGAACCTAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPSGRAR*GEPSPS
Trigger: GGATGGGCTAGGTTCCCCGCACCTCGCCCTGCCACT...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCAGTGGCAGGGCGAGGTaGGGGGAACCTAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGSGRAR*GEPSPS
Trigger: GGATGGGCTAGGTTCCCCGCACCTCGCCCTGCCACT...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGATCTGGGGGCAGTGGCTaGTTGCCCAGGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGSGGSG*LPRDWG
Trigger: GCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGA...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGGCTCGGGTGGGGACGTaGTCCCAGGCCCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLARVGT*SQAPPQ
Trigger: CTGCGGAGGGGCCTGGGACCACGTCCCCACCCGAGC...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGACCAGCAGTGCTCGGGTaGGGACGTGGTCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGPAVLG*GRGPRP
Trigger: GGGCCTGGGACCACGTCCCCACCCGAGCACTGCTGG...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTCTGGCAACAGCCTCATaGCGAACACGGCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPLATAS*RTRLGA
Trigger: AGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAG...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGACTGGAAGGGGGTCCTaGATGGGGACCCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWTGRGS*MGTQAG
Trigger: CCCTGCCTGGGTCCCCATCCAGGACCCCCTTCCAGT...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000643932.2
CDS-3UTR CCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAATGTGGCCGTGGGCCTaGGGAAGGTGGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAMWPWA*GRWAAK
Trigger: CTTGGCTGCCCACCTTCCCCAGGCCCACGGCCACAT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGCCAGCGGCGCCACGTaGGTGGGTAGCAGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCASGAT*VGSSAG
Trigger: GCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGAGGAGAGGGTTTGCTCTaGGGGCCGGCCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGGEGLL*GPARNQ
Trigger: CTGGTTCCTGGCCGGCCCTCAGAGCAAACCCTCTCC...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGAGGTGGAGGCTGCAGTaGGCTGAGATGGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWRWRLQ*AEMAPL
Trigger: CAGTGGCGCCATCTCAGCTCACTGCAGCCTCCACCT...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATCACCCTTGGCCTGCTTaGAACCCCCACGCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHHPWPA*NPHACV
Trigger: GACACAGGCGTGGGGGTTTCAAGCAGGCCAAGGGTG...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGCACCCTTGGCCTGCTTaGAACCCCCACGCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPHPWPA*NPHACV
Trigger: GACACAGGCGTGGGGGTTTCAAGCAGGCCAAGGGTG...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAAGGTGTCCAGCTCGTTaGGCAGAGTCGGGCGCACTG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTARCPAR*AESGAL
Trigger: CAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCTCGGCCGTCGCGTTaGGGCACCGCACGAACCGAG +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSPRPSR*GTARTE
Trigger: CTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGG...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCCTCGGCCGTCGCGTTaGGGCACCGCACGAACCGAG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVPRPSR*GTARTE
Trigger: CTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGG...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATCTCTCCACCCGGCCTTaGACTCGCAGGCTGCGTACA +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHLSTRP*TRRLRT
Trigger: TGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAG...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCGCCGGCGGCGGACGCTaGGTACTGTCCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESAGGGR*VLSRLW
Trigger: CCACAGCCTGGACAGTACGCAGCGTCCGCCGCCGGC...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAGCACAGCCCAGACGCTaGCTCTGGGAAGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAAQPRR*LWEGSL
Trigger: CAGGCTTCCTTCCCAGAGGCAGCGTCTGGGCTGTGC...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTCCAGCACTGTCATATTaGTGGCCCCCTTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPPALSY*WPPSLR
Trigger: CCGGAGGGAAGGGGGCCAGCAATATGACAGTGCTGG...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGAACAGCTGGAAGCGGATaGTCCTACCAGGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGTAGSG*SYQGPG
Trigger: CCCGGGGCCCTGGTAGGACCATCCGCTTCCAGCTGT...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCCGGTTCTGGGGGCAGTaGCTGGTTGCCCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPRFWGQ*LVAQGL
Trigger: CAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCG...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCGCTCGGGTGGGGACGTaGTCCCAGGCCCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVARVGT*SQAPPQ
Trigger: CTGCGGAGGGGCCTGGGACCACGTCCCCACCCGAGC...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCCAGCAGTGCTCGGGTaGGGACGTGGTCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCPAVLG*GRGPRP
Trigger: GGGCCTGGGACCACGTCCCCACCCGAGCACTGCTGG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCCTGGCAACAGCCTCATaGCGAACACGGCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: ESRGQADCLCGRGARGRSLATAS*RTRLGA
Trigger: AGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAG...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTGCAGTCGTCCACGCATaGGGACAGGAAGGTGCGCAT +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPAVVHA*GQEGAH
Trigger: ATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGC...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGCCCTTGACAGAGATGTaGCCGTGGGCCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEPLTEM*PWAWGR
Trigger: CCTTCCCCAGGCCCACGGCCACATCTCTGTCAAGGG...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCCCAGATGGGACCCCGTaGTCAGTCTTGGCACGAGGG +
Preference number: 4 (lower is better)
Translates to: ESRGQADCLCGRGARGRSPDGTP*SVLARG
Trigger: CCCTCGTGCCAAGACTGACCACGGGGTCCCATCTGG...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGCCCAGACGCTGCCTCTaGGAAGGAAGCCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWPRRCL*EGSLRP
Trigger: TGGCCTCAGGCTTCCTTCCCAGAGGCAGCGTCTGGG...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTATGGCAGCGCTGAGCTaGGGGACAGGCTTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPMAALS*GTGFAN
Trigger: GTTGGCAAAGCCTGTCCCCCAGCTCAGCGCTGCCAT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp ACCTGGGAGAGACCACAGCCTCGCCCACCGCTCCCTTaGCAAAGCTGGTCACAACTGACCGCACCTCCACCA +
Preference number: 4 (lower is better)
Translates to: TWERPQPRPPLP*QSWSQLTAPPP
Trigger: TGGTGGAGGTGCGGTCAGTTGTGACCAGCTTTGCAAAGGGAGCGGTGGGCGAGGCTGTGGTCTCTCCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACGGGACGCAGACGCAGTaGCAGGGGGCAGGCAGATAC +
Preference number: 4 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHGTQTQ*QGAGRY
Trigger: GTATCTGCCTGCCCCCTGTCACTGCGTCTGCGTCCC...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAACCAGGGCCCCGGGATaGTGTTTCCACACGCACGTA +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTATRAPG*CFHTHV
Trigger: TACGTGCGTGTGGAAACATCATCCCGGGGCCCTGGT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGCCAGCTGAGGGTCAGTaGGAAAACCCCAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEPAEGQ*ENPRHS
Trigger: GCTGTGCCTGGGGTTTTCTCACTGACCCTCAGCTGG...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGACTCCGGGCTGCGCTaGACCGGCGATAACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVDSGLR*TGDNQA
Trigger: GGCCTGGTTATCGCCGGTTCAGCGCAGCCCGGAGTC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCGACTCCGGGCTGCGCTaGACCGGCGATAACCAGGCC +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESDSGLR*TGDNQA
Trigger: GGCCTGGTTATCGCCGGTTCAGCGCAGCCCGGAGTC...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTTTTCCCGAGGAGAAGTaGGAGCAGCTCTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPFPEEK*EQLCMA
Trigger: CGCCATGCAGAGCTGCTCTCACTTCTCCTCGGGAAA...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGGGGGCAGTGGCTGGTTaGCCAGGGACTGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQGAVAG*PGTGAC
Trigger: ACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCC...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCGGAACAGGTCACTGCTaGATCCCCCAGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: ESRGQADCLCGRGARGRSGTGHC*IPQAQG
Trigger: CCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCC...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGTGTGCGCAGCAGCTTaGACTGGCCGTAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCVCAAA*TGRRAR
Trigger: GCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACAC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCGTGTGCGCAGCAGCTTaGACTGGCCGTAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESVCAAA*TGRRAR
Trigger: GCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACAC...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGACATCTGCACTGTCGGTaGAGCCCCAGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGHLHCR*SPSLST
Trigger: GGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATG...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAGCCGGCGGCGGACGCTaGGTACTGTCCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPAGGGR*VLSRLW
Trigger: CCACAGCCTGGACAGTACGCAGCGTCCGCCGCCGGC...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACAGGACGGCACTGCCTaGAATAAGGCTGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAQDGTA*NKAARA
Trigger: TGCCCTGGCAGCCTTATTGCAGGCAGTGCCGTCCTG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGTTCCCACCCTTGGCCTaGTTGAAACCCCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWFPPLA*LKPPRL
Trigger: CAGGCGTGGGGGTTTCAAGCAGGCCAAGGGTGGGAA...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGGGTGTGCATGAGGGATaGGGTGGAGGCAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPGVHEG*GGGKAG
Trigger: TCCTGCCTTGCCTCCACCGCATCCCTCATGCACACC...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCGGGCAGGTGGTAGGATaGCGCAGGGCCAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESGQVVG*RRASGL
Trigger: CAGCCCACTGGCCCTGCGGCATCCTACCACCTGCCC...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCTCTGGGGGCAGTGGCTaGTTGCCCAGGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESSGGSG*LPRDWG
Trigger: GCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGA...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCACCAGCAGTGCTCGGGTaGGGACGTGGTCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPPAVLG*GRGPRP
Trigger: GGGCCTGGGACCACGTCCCCACCCGAGCACTGCTGG...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGCAGAGTCGGGCGCACTaGCCAGCAGTGCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLQSRAH*PAVLGW
Trigger: CCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTG...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCAGAGTCGGGCGCACTaGCCAGCAGTGCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESQSRAH*PAVLGW
Trigger: CCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCCATGGCGAACACGGCTaGGCGCTCAGGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSHGEHG*ALRGKG
Trigger: GCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATG...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCATGGCGAACACGGCTaGGCGCTCAGGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCHGEHG*ALRGKG
Trigger: GCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGATGGGATTCGCAGCCTaGCAACCCTGGTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWMGFAA*QPWWWH
Trigger: GTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCAT...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGAATTTGTGACAGGGGGTaGAACGAGGGCCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGICDRG*NEGRGR
Trigger: CCGGCCTCGGCCCTCGTTCCACCCCCTGTCACAAAT...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643932.2
CDS-3UTR CCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAAAGGCCTCCAGCCCCTaGGCCAAGGACAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAKASSP*AKDREQ
Trigger: CTGTTCTCTGTCCTTGGCCCAGGGGCTGGAGGCCTT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCGTACTGTCCAGGCTGTaGCCAAGATCCCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: ESRGQADCLCGRGARGRSVLSRL*PRSPGR
Trigger: TCGCCCTGGGGATCTTGGCCACAGCCTGGACAGTAC...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCGCCAGCGGCGCCACGTaGGTGGGTAGCAGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLASGAT*VGSSAG
Trigger: GCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGC...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTCCCATTTTGGGAGCCTaGAGACAGGCCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPPILGA*RQAWFS
Trigger: GCTGAACCAGGCCTGTCTCCAGGCTCCCAAAATGGG...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATGGAAGAGCTGGGGCTTaGACCCTAGTCCCGTCTGAC +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHGRAGA*TLVPSD
Trigger: GTCAGACGGGACTAGGGTCCAAGCCCCAGCTCTTCC...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAGGTCCTGGGAGGCAGTaGCAGGGCGAGGTGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPGPGRQ*QGEVRG
Trigger: TCCCCGCACCTCGCCCTGCCACTGCCTCCCAGGACC...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGCCGGGCTTATGGGCCTaGAGCCTATGGCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWPGLWA*SLWHPR
Trigger: CCTTGGATGCCATAGGCTCCAGGCCCATAAGCCCGG...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp AGGCCTGGTTCAGCGGCTACGTCCAGCACTGTCATATaGCTGGCCCCCTTCCCTCCGGGAATCCCACATGCA +
Preference number: 4 (lower is better)
Translates to: RPGSAATSSTVI*LAPFPPGIPHA
Trigger: TGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGCAATATGACAGTGCTGGACGTAGCCGCTGAACCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGGAGAGGGTTTGCTCTaGGGGCCGGCCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVGEGLL*GPARNQ
Trigger: CTGGTTCCTGGCCGGCCCTCAGAGCAAACCCTCTCC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGGGACGCAGACGCAGTaGCAGGGGGCAGGCAGATAC +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVGTQTQ*QGAGRY
Trigger: GTATCTGCCTGCCCCCTGTCACTGCGTCTGCGTCCC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCTCCAGCTGGCATCCTaGGGCACCTCCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCLQLAS*GTSTGH
Trigger: GTGGCCTGTGGAGGTGCCTCAGGATGCCAGCTGGAG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCGCTGGAGCTCCAGGCTaGGGACGCCTCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESAGAPG*GRLHCP
Trigger: TGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGC...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCCCCTGGTGGTGGCACTaGCAGAGAGGAGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSPWWWH*QRGGSR
Trigger: CCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGG...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCTGGGCAGTGTCCAGCTaGGGGTCAGTGAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: ESRGQADCLCGRGARGRSWAVSS*GSVRKP
Trigger: GGGTTTTCTCACTGACCCTCAGCTGGACACTGCCCA...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCTGGCACAGATGCTGCTaGCAGTGGCCCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESWHRCC*QWPLLG
Trigger: GCCCAGGAGGGGCCACTGTCAGCAGCATCTGTGCCA...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTGCCCTGCTGATTCCCTaGGGGGCCCTCTTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSALLIP*GALFPH
Trigger: GTGGGGAAAGAGGGCCCCTCAGGGAATCAGCAGGGC...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGAAAAGGAAGAGTCCCTaGGCTCCACACCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPKRKSP*APHPRP
Trigger: TGGCCTGGGGTGTGGAGCTCAGGGACTCTTCCTTTT...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGGCTCCATGGCAAAGGTaGCAGCTTCTCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWAPWQR*QLLLQV
Trigger: GACCTGCAGGAGAAGCTGTCACCTTTGCCATGGAGC...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGACCTCCTAGGAATACCTaGCGCTGGCCTTTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGPPRNT*RWPFPR
Trigger: CCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGG...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACACCACAGCGCACAATaGCACAGAGGGATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAHHSAQ*HRGMAK
Trigger: CTTGGCCATCCCTCTGTGTCATTGTGCGCTGTGGTG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAAGGTGTCCAGCTCGTTaGGCAGAGTCGGGCGCACTG +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGRCPAR*AESGAL
Trigger: CAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCT...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGGGGACAGGAAGGTaGGCATCCGCACCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSMGTGR*ASAPRP
Trigger: CGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCAT...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAGTGTGCGCAGCAGCTTaGACTGGCCGTAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVVCAAA*TGRRAR
Trigger: GCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACAC...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCCCATGTCGGTCAAGCTaGAGAGCCATGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ESRGQADCLCGRGARGRSPCRSS*RAMDSS
Trigger: GCTGCTGTCCATGGCTCTGCAGCTTGACCGACATGG...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATAGGCCCAGCTCCTCCTaGTCGTTGATGCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHRPSSS*SLMHSW
Trigger: CCAGCTATGCATCAACGAGCAGGAGGAGCTGGGCCT...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGAGGCCCAGCTCCTCCTaGTCGTTGATGCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEERPSSS*SLMHSW
Trigger: CCAGCTATGCATCAACGAGCAGGAGGAGCTGGGCCT...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAGAAAGGCTCCACACCTaGAGGAGGGACTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAERLHT*RRDSLV
Trigger: GACCAAGGAGTCCCTCCTGCAGGTGTGGAGCCTTTC...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCTGGGCGACTCCGGGCTaGGCTGAACCGGCGATAACC +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSWATPG*AEPAIT
Trigger: GGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCA...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTCTCTGCATTCCCCCTTaGTGTTCCCTCTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPLCIPP*CSLSMS
Trigger: GGACATGGAGAGGGAACAGCAAGGGGGAATGCAGAG...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGAGGCCCTCCAGAATCTaGCCCCACCTGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWRPSRI*PHLLLQ
Trigger: CTGAAGAAGCAGGTGGGGGCAGATTCTGGAGGGCCT...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCACAGCTGGAAGCGGATaGTCCTACCAGGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVTAGSG*SYQGPG
Trigger: CCCGGGGCCCTGGTAGGACCATCCGCTTCCAGCTGT...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCGAGCAGGCCGGGCTGTaGGCACTCTTGCAACCGCAC +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESEQAGL*ALLQPH
Trigger: GTGCGGTTGCAAGAGTGCCCACAGCCCGGCCTGCTC...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGTGGTTGCCCAGGGACTaGGGCATGTTCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWWLPRD*GMFMAA
Trigger: AGCTGCCATGAACATGCCCCAGTCCCTGGGCAACCA...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGTGGTTGCCCAGGGACTaGGGCATGTTCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPWLPRD*GMFMAA
Trigger: AGCTGCCATGAACATGCCCCAGTCCCTGGGCAACCA...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAAGGGGTTCCAAGGGATaGCGGTTCTGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGRGSKG*RFWGQW
Trigger: CCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCT...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGCTCGGGTGGGGACGTaGTCCCAGGCCCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWARVGT*SQAPPQ
Trigger: CTGCGGAGGGGCCTGGGACCACGTCCCCACCCGAGC...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTCGGCCAGGGACTCTTTaGAACAGGTCACTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPRPGTL*NRSLLH
Trigger: ATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCG...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGGGAAGAGCTCGGTGCTaGCAAAGGAGCGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEGRARC*QRSGKD
Trigger: GTCCTTTCCGCTCCTTTGCCAGCACCGAGCTCTTCC...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGCCAGCGGCGCCACGTaGGTGGGTAGCAGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGASGAT*VGSSAG
Trigger: GCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGC...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCCCGTGGTCAGTCTTaGCACGAGGGGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSPRGQS*HEGAAG
Trigger: TCCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGG...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCCCCGTGGTCAGTCTTaGCACGAGGGGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCPRGQS*HEGAAG
Trigger: TCCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTAAGTTCTCCATGTCCTaGGAAGGGCTCCAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPKFSMS*EGLQVP
Trigger: AGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGCCCAGACGCTGCCTCTaGGAAGGAAGCCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQPRRCL*EGSLRP
Trigger: TGGCCTCAGGCTTCCTTCCCAGAGGCAGCGTCTGGG...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGTAGGAGTTCAGGCCTaGGCGACTCCGGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVVGVQA*ATPGCA
Trigger: AGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTAC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGAATGACCCCTCCTCACTaGGAGGGATGCACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGMTPPH*EGCTPA
Trigger: AGCTGGGGTGCATCCCTCCCAGTGAGGAGGGGTCAT...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGGCCTGGAGACAGGCCTaGTTCAGCGGCTACGTCCAG +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQAWRQA*FSGYVQ
Trigger: CTGGACGTAGCCGCTGAACCAGGCCTGTCTCCAGGC...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGGCAACCTCTCCCTCATaGACATCTGCGGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWATSPS*TSAAPP
Trigger: AGGAGGTGCCGCAGATGTCCATGAGGGAGAGGTTGC...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGGCAACCTCTCCCTCATaGACATCTGCGGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEATSPS*TSAAPP
Trigger: AGGAGGTGCCGCAGATGTCCATGAGGGAGAGGTTGC...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCAGAGAGCAGCTCTGCATaGCGATGGAGGTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEAESSSA*RWRSPG
Trigger: CCCAGGTGACCTCCATCGCCATGCAGAGCTGCTCTC...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACTGGCTGCGGGTCACTaGAGGGTGACAGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTALAAGH*RVTVMK
Trigger: CTTCATCACTGTCACCCTCCAGTGACCCGCAGCCAG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGAATCACTGACACCTCCTaGCTGCGGGTCACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGITDTS*LRVTGG
Trigger: CCCTCCAGTGACCCGCAGCCAGGAGGTGTCAGTGAT...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCGGAAGAGCTGGGGCTTaGACCCTAGTCCCGTCTGAC +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPGRAGA*TLVPSD
Trigger: GTCAGACGGGACTAGGGTCCAAGCCCCAGCTCTTCC...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGCAAGAGGCAGGTCCTaGGAGGCAGTGGCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCARGRS*EAVAGR
Trigger: TCGCCCTGCCACTGCCTCCCAGGACCTGCCTCTTGC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCACTCCAGCTGGCATCCTaGGGCACCTCCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPLQLAS*GTSTGH
Trigger: GTGGCCTGTGGAGGTGCCTCAGGATGCCAGCTGGAG...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAGCTGGAGCTCCAGGCTaGGGACGCCTCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPAGAPG*GRLHCP
Trigger: TGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGC...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCGCTGGAGCTCCAGGCTaGGGACGCCTCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVAGAPG*GRLHCP
Trigger: TGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGC...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATCCCTGGTGGTGGCACTaGCAGAGAGGAGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHPWWWH*QRGGSR
Trigger: CCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGG...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGCAGGTGGCAGAAACATaGGGTTGCTCAGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEQVAET*GCSGRA
Trigger: TGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTG...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTGGGCTGGGATTTGTaGCAGGGGGTGGAACGAGGG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVLGWDL*QGVERG
Trigger: CCCTCGTTCCACCCCCTGTCACAAATCCCAGCCCAG...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR TCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCTGGGCTGGGATTTGTaGCAGGGGGTGGAACGAGGG +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESLGWDL*QGVERG
Trigger: CCCTCGTTCCACCCCCTGTCACAAATCCCAGCCCAG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR TCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGCTGGACACTGGGGCTTaGACAAGGGCAGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLLDTGA*TRAGSG
Trigger: CCCACTCCCTGCCCTTGTTCAAGCCCCAGTGTCCAG...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR TCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATGATGAGGGCAAAGGCTaGGATAATGGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHDEGKG*DNGLGW
Trigger: CCAGCCCAACCCATTATCTCAGCCTTTGCCCTCATC...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643932.2
CDS-3UTR TCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTCCACACTGCCCGCAATaGGCATATGCCAAATGCTGT +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPPHCPQ*AYAKCC
Trigger: ACAGCATTTGGCATATGCTCATTGCGGGCAGTGTGG...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAGCTCCTCCTGCTCGTTaGTGCATAGCTGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAAPPAR*CIAGNH
Trigger: GTGGTTACCAGCTATGCATCAACGAGCAGGAGGAGC...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAGCCCTGCTGATTCCCTaGGGGGCCCTCTTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPALLIP*GALFPH
Trigger: GTGGGGAAAGAGGGCCCCTCAGGGAATCAGCAGGGC...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTACTGTGTACAGGGTGTaGCAAAAGCCTCCGGCAGTA +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPTVYRV*QKPPAV
Trigger: TACTGCCGGAGGCTTTTGTCACACCCTGTACACAGT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGAATGCAGGGCCCAGATaGGCGGGATCAGACTGTGTA +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEENAGPR*AGSDCV
Trigger: TACACAGTCTGATCCCGCTCATCTGGGCCCTGCATT...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCACACTTCACCACCGTGTaGGCTCCTTCAGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEAHFTTV*APSGQD
Trigger: ATCCTGCCCTGAAGGAGCTCACACGGTGGTGAAGTG...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGAGGTGGAGGCTGCAGTaGGCTGAGATGGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLRWRLQ*AEMAPL
Trigger: CAGTGGCGCCATCTCAGCTCACTGCAGCCTCCACCT...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACGACCCTAGTCCCGTCTaGCTCCAGGGCCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHDPSPV*LQGHPH
Trigger: ATGAGGATGGCCCTGGAGTCAGACGGGACTAGGGTC...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGCGCACTGGCCAGCAGTaGTCGGGTGGGGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGRERTGQQ*SGGDVV
Trigger: GACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCG...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTAGGTGTCCAGCTCGTTaGGCAGAGTCGGGCGCACTG +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCRCPAR*AESGAL
Trigger: CAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCT...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGGGAACAGGTCACTGCTaGATCCCCCAGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQGTGHC*IPQAQG
Trigger: CCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCC...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGAACCAGGTCCCCGTCTaGGGGAATGGGATTCGCAGC +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQNQVPV*GNGIRS
Trigger: GCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCCTCGGCCGTCGCGTTaGGGCACCGCACGAACCGAG +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVPRPSR*GTARTE
Trigger: CTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAATGGGGACAGGAAGGTaGGCATCCGCACCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPMGTGR*ASAPRP
Trigger: CGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCAT...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCTCTCCACCCGGCCTTaGACTCGCAGGCTGCGTACA +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESLSTRP*TRRLRT
Trigger: TGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCCTCTCCACCCGGCCTTaGACTCGCAGGCTGCGTACA +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSLSTRP*TRRLRT
Trigger: TGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAG...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCATCTGCACTGTCGGTaGAGCCCCAGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESHLHCR*SPSLST
Trigger: GGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCATCTGCACTGTCGGTaGAGCCCCAGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVHLHCR*SPSLST
Trigger: GGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATG...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAATTGATGACAGGGGGTaGCCCGGACCGGAAATACAC +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAIDDRG*PGPEIH
Trigger: GTGTATTTCCGGTCCGGGGCACCCCCTGTCATCAAT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGCACAGCCCAGACGCTaGCTCTGGGAAGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVAQPRR*LWEGSL
Trigger: CAGGCTTCCTTCCCAGAGGCAGCGTCTGGGCTGTGC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATAGCTGGGCTTGGTGGTaGACACCTCTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHSWAWW*TPLIPA
Trigger: AGCTGGGATTAGAGGTGTGCACCACCAAGCCCAGCT...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGCTCTGCATTCCCCCTTaGTGTTCCCTCTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWLCIPP*CSLSMS
Trigger: GGACATGGAGAGGGAACAGCAAGGGGGAATGCAGAG...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAAGGGCACCCCCATGTTaGTCATCTGCTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGRAPPC*SSAGSP
Trigger: TGGGGAGCCAGCAGATGAGCAACATGGGGGTGCCCT...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGAATGAGTGGGCAGACCTaGATGCAGATGGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGMSGQT*MQMAAL
Trigger: CAGCGCTGCCATCTGCATGCAGGTCTGCCCACTCAT...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATTCCCTCATGGACATCTaGGGCACCTCCTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHSLMDI*GTSSFV
Trigger: CACAAAGGAGGAGGTGCCGCAGATGTCCATGAGGGA...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCGGGAGGCTGACCTGCTaGAGCTCAGACATCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPGRLTC*SSDIRS
Trigger: TGACCTGATGTCTGAGCTGCAGCAGGTCAGCCTCCC...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTGTAGCTGATGATGGATaGCATCCTCCATCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPVADDG*HPPSSL
Trigger: GAGGCTGGATGGAGGATGGCATCCATCATCAGCTAC...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCCCCAGGTCCCACAGCTaGCAAGCCTGCAACTTTGTG +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPPRSHS*QACNFV
Trigger: CACAAAGTTGCAGGCTTGGCAGCTGTGGGACCTGGG...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGCAGGGGTGGGGCTTTaGGACGCAGACGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCAGVGL*DADAVT
Trigger: TGTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCGAGCAGGCCGGGCTGTaGGCACTCTTGCAACCGCAC +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVEQAGL*ALLQPH
Trigger: GTGCGGTTGCAAGAGTGCCCACAGCCCGGCCTGCTC...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCTCTGGGGGCAGTGGCTaGTTGCCCAGGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPSGGSG*LPRDWG
Trigger: GCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGA...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCGCTCGGGTGGGGACGTaGTCCCAGGCCCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFARVGT*SQAPPQ
Trigger: CTGCGGAGGGGCCTGGGACCACGTCCCCACCCGAGC...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGCCAGCAGTGCTCGGGTaGGGACGTGGTCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGPAVLG*GRGPRP
Trigger: GGGCCTGGGACCACGTCCCCACCCGAGCACTGCTGG...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTGGCAACAGCCTCATaGCGAACACGGCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVLATAS*RTRLGA
Trigger: AGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAG...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACGGCCAGGGACTCTTTaGAACAGGTCACTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTARPGTL*NRSLLH
Trigger: ATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGATGGGATTCGCAGCCTaGCAACCCTGGTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQMGFAA*QPWWWH
Trigger: GTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCAT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCCCCGTCTGCGGGAATaGGATTCGCAGCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESPRLRE*DSQPGN
Trigger: GTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCCCCGTCTGCGGGAATaGGATTCGCAGCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVPRLRE*DSQPGN
Trigger: GTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGG...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGGCAGTCGTCCACGCATaGGGACAGGAAGGTGCGCAT +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQAVVHA*GQEGAH
Trigger: ATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGC...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGGGCTGGGACAGGGCCTaGGCTGGGATTTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRGWDRA*AGICDR
Trigger: CCTGTCACAAATCCCAGCCCAGGCCCTGTCCCAGCC...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGGCCTTAAGCAAACACTaGGAATGGGGCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEALSKH*EWGWDR
Trigger: CCTGTCCCAGCCCCATTCCCAGTGTTTGCTTAAGGC...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGGCTGGGCTGGACACTaGGGCTTGAACAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCGWAGH*GLNKGR
Trigger: CCTGCCCTTGTTCAAGCCCCAGTGTCCAGCCCAGCC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAATGTGGCCGTGGGCCTaGGGAAGGTGGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVMWPWA*GRWAAK
Trigger: CTTGGCTGCCCACCTTCCCCAGGCCCACGGCCACAT...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCCCTTGACAGAGATGTaGCCGTGGGCCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCPLTEM*PWAWGR
Trigger: CCTTCCCCAGGCCCACGGCCACATCTCTGTCAAGGG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGAAGTTCTCCATGTCCTaGGAAGGGCTCCAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEKFSMS*EGLQVP
Trigger: AGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTT...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTAGACTCCACCTCCTCTaGAAAGATGCTGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPRLHLL*KDAVLL
Trigger: CAGGAGCACAGCATCTTTCCAGAGGAGGTGGAGTCT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCCCAGACGCTGCCTCTaGGAAGGAAGCCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESPRRCL*EGSLRP
Trigger: TGGCCTCAGGCTTCCTTCCCAGAGGCAGCGTCTGGG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCCCAGACGCTGCCTCTaGGAAGGAAGCCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCPRRCL*EGSLRP
Trigger: TGGCCTCAGGCTTCCTTCCCAGAGGCAGCGTCTGGG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTCACCATCTCAGGGAATaGCACCACCATCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPHHLRE*HHHPQI
Trigger: GATTTGGGGATGGTGGTGCCATTCCCTGAGATGGTG...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGCCCAGAGCTCATGAGTaGGCAGACCTGCATGCAGAT +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPPRAHE*ADLHAD
Trigger: ATCTGCATGCAGGTCTGCCCACTCATGAGCTCTGGG...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTGACAAATGTCTCCTGTaGCTCAGAGCAGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPDKCLL*LRAARA
Trigger: GGCTCTTGCTGCTCTGAGCCACAGGAGACATTTGTC...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTGGTCCTGGGAGGCAGTaGCAGGGCGAGGTGCGGGGA +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVGPGRQ*QGEVRG
Trigger: TCCCCGCACCTCGCCCTGCCACTGCCTCCCAGGACC...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGAGCAGACTGTCTATGTaGCAGGGGAGCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWSRLSM*QGSKRQ
Trigger: CTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCT...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTTCAGCAGGGCCCTCCTaGGGCAGGCCGAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPSAGPS*GRPRNL
Trigger: CAGGTTCCTCGGCCTGCCCCAGGAGGGCCCTGCTGA...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTACACACCAGCTGTGCTaGAACCCTGTAAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPTHQLC*NPVSEA
Trigger: AGCTTCACTTACAGGGTTTCAGCACAGCTGGTGTGT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCACCAGGGCCCCGGGATaGTGTTTCCACACGCACGTA +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSTRAPG*CFHTHV
Trigger: TACGTGCGTGTGGAAACATCATCCCGGGGCCCTGGT...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCGCTGGAGCTCCAGGCTaGGGACGCCTCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLAGAPG*GRLHCP
Trigger: TGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGC...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCCTGGTGGTGGCACTaGCAGAGAGGAGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCPWWWH*QRGGSR
Trigger: CCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGG...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCCTGGACACTGGGGCTTaGACAAGGGCAGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVLDTGA*TRAGSG
Trigger: CCCACTCCCTGCCCTTGTTCAAGCCCCAGTGTCCAG...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR TCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGCCAGCTGAGGGTCAGTaGGAAAACCCCAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRPAEGQ*ENPRHS
Trigger: GCTGTGCCTGGGGTTTTCTCACTGACCCTCAGCTGG...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCAGACGTTAAAGATGCCTaGGGTGCGGTTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEADVKDA*GAVGQC
Trigger: ACACTGCCCAACCGCACCTCAGGCATCTTTAACGTC...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCCATCCTGGAGACCCTTaGCAGAGATGTGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSHPGDP*QRCGRG
Trigger: CCCACGGCCACATCTCTGTCAAGGGTCTCCAGGATG...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCGCTCCTCCTGCTCGTTaGTGCATAGCTGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPAPPAR*CIAGNH
Trigger: GTGGTTACCAGCTATGCATCAACGAGCAGGAGGAGC...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTTGGCACAGATGCTGCTaGCAGTGGCCCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPWHRCC*QWPLLG
Trigger: GCCCAGGAGGGGCCACTGTCAGCAGCATCTGTGCCA...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCGGGACTCCTTGGTCCTaGGGGACTCTGTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESGTPWS*GTLCLH
Trigger: ATGCAGGCACAGAGTCCCTCAGGACCAAGGAGTCCC...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCGGGACTCCTTGGTCCTaGGGGACTCTGTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSGTPWS*GTLCLH
Trigger: ATGCAGGCACAGAGTCCCTCAGGACCAAGGAGTCCC...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGGTACCCAGAGCTCATaGGTGGGCAGACCTGCATGC +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVGTQSS*VGRPAC
Trigger: GCATGCAGGTCTGCCCACTCATGAGCTCTGGGTACC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTGGAGAGAGAATGAGATaGAGTGGGCAAACCAGACAG +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPGERMR*SGQTRQ
Trigger: CTGTCTGGTTTGCCCACTTCATCTCATTCTCTCTCC...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATGGAGCTCATCTCACCTaGCTCAGGGAGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHGAHLT*LREWGS
Trigger: GCTGCCCCACTCCCTGAGTCAGGTGAGATGAGCTCC...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCGGCCATGACCGAGCGTaGCACTGCGTGACACTGGTA +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSGHDRA*HCVTLV
Trigger: TACCAGTGTCACGCAGTGTCACGCTCGGTCATGGCC...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGGCCATGACCGAGCGTaGCACTGCGTGACACTGGTA +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCGHDRA*HCVTLV
Trigger: TACCAGTGTCACGCAGTGTCACGCTCGGTCATGGCC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGAACAGAGCTTGAGTTGTaGAGGGGTGGGGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGTELEL*RGGALG
Trigger: TCCCAAAGCCCCACCCCTGCACAACTCAAGCTCTGT...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTGGGGCAGTGGCTGGTTaGCCAGGGACTGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPGAVAG*PGTGAC
Trigger: ACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCC...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCATTTGGAACAGGTCACTaGTGCATCCCCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAFGTGH*CIPQAQ
Trigger: TTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAA...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTATGGGGACAGGAAGGTaGGCATCCGCACCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPMGTGR*ASAPRP
Trigger: CGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCAT...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGAATTGATGACAGGGGGTaGCCCGGACCGGAAATACAC +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGIDDRG*PGPEIH
Trigger: GTGTATTTCCGGTCCGGGGCACCCCCTGTCATCAAT...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGCCTGGGAAGTGTGTATaGAGGGGATTGATGACAGGG +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEPGKCV*RGLMTG
Trigger: CCCTGTCATCAATCCCCTGCATACACACTTCCCAGG...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCATGCAGAAAACCACGATaGCTGGCTGGTCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTACRKPR*LAGHRH
Trigger: ATGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCA...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCCAGGACGGCACTGCCTaGAATAAGGCTGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSQDGTA*NKAARA
Trigger: TGCCCTGGCAGCCTTATTGCAGGCAGTGCCGTCCTG...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGAGGCCCAGCTCCTCCTaGTCGTTGATGCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQRPSSS*SLMHSW
Trigger: CCAGCTATGCATCAACGAGCAGGAGGAGCTGGGCCT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCAGTCTTTCCTGCCTCTaGATTCCCCCTTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ESRGQADCLCGRGARGRSSLSCL*IPPCCS
Trigger: GGAACAGCAAGGGGGAATGCAGAGGCAGGAAAGACT...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCATGCCCCAGGCAGCTaGAAGTGCTCAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCHAPGS*KCSGVS
Trigger: TGAGACCCCTGAGCACTTGCAGCTGCCTGGGGCATG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTAGTAGAGAAGACAGGTaGACCACAGCGCACAATGAC +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPSREDR*TTAHND
Trigger: GTCATTGTGCGCTGTGGTGCACCTGTCTTCTCTACT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCGTAGCTGATGATGGATaGCATCCTCCATCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGVADDG*HPPSSL
Trigger: GAGGCTGGATGGAGGATGGCATCCATCATCAGCTAC...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAAGCTGTGACCACAGGTaGAAACCACCATGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTASCDHR*KPPCLG
Trigger: TCCTAGGCATGGTGGTTTGCACCTGTGGTCACAGCT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTGGGCAGGTGGTAGGATaGCGCAGGGCCAGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVGQVVG*RRASGL
Trigger: CAGCCCACTGGCCCTGCGGCATCCTACCACCTGCCC...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTTCCAAGGCGCAGAACTaGAACGTGACCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPSKAQN*NVTQYS
Trigger: TGAATACTGGGTCACGTTGCAGTTCTGCGCCTTGGA...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAGCAGGGGTGGGGCTTTaGGACGCAGACGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPAGVGL*DADAVT
Trigger: TGTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGC...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGCGGTTCTGGGGGCAGTaGCTGGTTGCCCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGRERFWGQ*LVAQGL
Trigger: CAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCG...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGACGGCCAGGGACTCTTTaGAACAGGTCACTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGRPGTL*NRSLLH
Trigger: ATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCG...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTATGGGATTCGCAGCCTaGCAACCCTGGTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCMGFAA*QPWWWH
Trigger: GTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCAT...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTACCCCGTCTGCGGGAATaGGATTCGCAGCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVPRLRE*DSQPGN
Trigger: GTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGG...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGCAGTCGTCCACGCATaGGGACAGGAAGGTGCGCAT +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVAVVHA*GQEGAH
Trigger: ATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGAAGGGGGTCCTGGATaGGGACCCAGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWEGGPG*GPRQGL
Trigger: CAGCCCCTGCCTGGGTCCCCATCCAGGACCCCCTTC...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGGCTGAGATAATGGGTTaGGCTGGGCTGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQAEIMG*AGLDTG
Trigger: CCCAGTGTCCAGCCCAGCCCAACCCATTATCTCAGC...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAAGGCCTCCAGCCCCTaGGCCAAGGACAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSKASSP*AKDREQ
Trigger: CTGTTCTCTGTCCTTGGCCCAGGGGCTGGAGGCCTT...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCATCAGGAACATGGAAGTaGAAGAGCTCGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTASGTWK*KSSVLA
Trigger: TGCCAGCACCGAGCTCTTCCACTTCCATGTTCCTGA...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGTACTGTCCAGGCTGTaGCCAAGATCCCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVVLSRL*PRSPGR
Trigger: TCGCCCTGGGGATCTTGGCCACAGCCTGGACAGTAC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCCCGTGGTCAGTCTTaGCACGAGGGGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCPRGQS*HEGAAG
Trigger: TCCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGG...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGAGGGCTCCAGGTCCCTaGAAGAGTTTTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPRAPGP*KSFVSL
Trigger: CAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACCCCATTTTGGGAGCCTaGAGACAGGCCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHPILGA*RQAWFS
Trigger: GCTGAACCAGGCCTGTCTCCAGGCTCCCAAAATGGG...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGACACTGTGCTGAGTGCTaGGCCAAGTGCAAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGHCAEC*AKCKLH
Trigger: ATGGAGCTTGCACTTGGCCCAGCACTCAGCACAGTG...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACAGTGGCCAACACAATaGCAACAGGAAGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAQWPTQ*QQEGTG
Trigger: TCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCGCACCTCCCCTTCTGTaGCCACGTCATCAACTACTT +
Preference number: 4 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGAPPLL*PRHQLL
Trigger: AAGTAGTTGATGACGTGGCCACAGAAGGGGAGGTGC...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTACGAGCACTGTAACCTaGAGGTGGTCCTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPTSTVT*RWSCLC
Trigger: ACACAAACAGGACCACCTCCAGGTTACAGTGCTCGT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGGAGAGCAGCTCTGCATaGCGATGGAGGTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLESSSA*RWRSPG
Trigger: CCCAGGTGACCTCCATCGCCATGCAGAGCTGCTCTC...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGAGCAGTGCTGGGCTCTaGAGAATGGGCAGAACACCC +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQSSAGL*RMGRTP
Trigger: GGGTGTTCTGCCCATTCTCCAGAGCCCAGCACTGCT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACCTGGCTGCGGGTCACTaGAGGGTGACAGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHLAAGH*RVTVMK
Trigger: CTTCATCACTGTCACCCTCCAGTGACCCGCAGCCAG...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACATGCCGCAGGGCCAGTaGGCTGTGTGCAGATATGAC +
Preference number: 4 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHMPQGQ*AVCRYD
Trigger: GTCATATCTGCACACAGCCCACTGGCCCTGCGGCAT...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp GGTGCGGGGAACCTAGCCCATCCCAGCACCGTGCACTaGCTCATAATGAACTCGGCACTTCCCAAACCACAG +
Preference number: 4 (lower is better)
Translates to: GAGNLAHPSTVH*LIMNSALPKPQ
Trigger: CTGTGGTTTGGGAAGTGCCGAGTTCATTATGAGCAAGTGCACGGTGCTGGGATGGGCTAGGTTCCCCGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGGGACGCAGACGCAGTaGCAGGGGGCAGGCAGATAC +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGGTQTQ*QGAGRY
Trigger: GTATCTGCCTGCCCCCTGTCACTGCGTCTGCGTCCC...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACGGGACGCAGACGCAGTaGCAGGGGGCAGGCAGATAC +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANGTQTQ*QGAGRY
Trigger: GTATCTGCCTGCCCCCTGTCACTGCGTCTGCGTCCC...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCTCCAGCTGGCATCCTaGGGCACCTCCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVLQLAS*GTSTGH
Trigger: GTGGCCTGTGGAGGTGCCTCAGGATGCCAGCTGGAG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAACCAGGGCCCCGGGATaGTGTTTCCACACGCACGTA +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVTRAPG*CFHTHV
Trigger: TACGTGCGTGTGGAAACATCATCCCGGGGCCCTGGT...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGGAAGGAAGGGCTGTaGTGGGGACTGCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPWKEGL*WGLQQG
Trigger: CCCTTGCTGCAGTCCCCATCACAGCCCTTCCTTCCA...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR TCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCAGGGCTGGCGGCAGCTaGAACCCAGACTTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESRAGGS*NPDLSL
Trigger: TAGACTCAAGTCTGGGTTTCAGCTGCCGCCAGCCCT...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATCCAGCTGAGGGTCAGTaGGAAAACCCCAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHPAEGQ*ENPRHS
Trigger: GCTGTGCCTGGGGTTTTCTCACTGACCCTCAGCTGG...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCTGGGCAGTGTCCAGCTaGGGGTCAGTGAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSWAVSS*GSVRKP
Trigger: GGGTTTTCTCACTGACCCTCAGCTGGACACTGCCCA...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTTGGGCAGTGTCCAGCTaGGGGTCAGTGAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSWAVSS*GSVRKP
Trigger: GGGTTTTCTCACTGACCCTCAGCTGGACACTGCCCA...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCTGGGCAGTGTCCAGCTaGGGGTCAGTGAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESWAVSS*GSVRKP
Trigger: GGGTTTTCTCACTGACCCTCAGCTGGACACTGCCCA...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGGACGTTAAAGATGCCTaGGGTGCGGTTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQDVKDA*GAVGQC
Trigger: ACACTGCCCAACCGCACCTCAGGCATCTTTAACGTC...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCACATCCTGGAGACCCTTaGCAGAGATGTGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPHPGDP*QRCGRG
Trigger: CCCACGGCCACATCTCTGTCAAGGGTCTCCAGGATG...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGAAATACAGCACCTGCTTaGCCACGGGCTGTAAACGAG +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGNTAPA*PRAVNE
Trigger: CTCGTTTACAGCCCGTGGTCAAGCAGGTGCTGTATT...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGACCACACTGCCCGCAATaGGCATATGCCAAATGCTGT +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGPHCPQ*AYAKCC
Trigger: ACAGCATTTGGCATATGCTCATTGCGGGCAGTGTGG...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAGGGACTCCTTGGTCCTaGGGGACTCTGTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPGTPWS*GTLCLH
Trigger: ATGCAGGCACAGAGTCCCTCAGGACCAAGGAGTCCC...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCAACTGTGTACAGGGTGTaGCAAAAGCCTCCGGCAGTA +
Preference number: 4 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEATVYRV*QKPPAV
Trigger: TACTGCCGGAGGCTTTTGTCACACCCTGTACACAGT...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCGACTCCGGGCTGCGCTaGACCGGCGATAACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFDSGLR*TGDNQA
Trigger: GGCCTGGTTATCGCCGGTTCAGCGCAGCCCGGAGTC...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTAAAAGGAAGAGTCCCTaGGCTCCACACCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCKRKSP*APHPRP
Trigger: TGGCCTGGGGTGTGGAGCTCAGGGACTCTTCCTTTT...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGCCTGCTTCTTCAGCCTaGTTTTCCACTATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWPASSA*FSTMPF
Trigger: GAAGGGCATAGTGGAAAATCAGGCTGAAGAAGCAGG...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCTCCTTCCACTGTGCTaGGTGCTGGGCCAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESLLPLC*VLGQVQ
Trigger: TTGCACTTGGCCCAGCACTCAGCACAGTGGAAGGAG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCAGGTACCCAGAGCTCATaGGTGGGCAGACCTGCATGC +
Preference number: 4 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPGTQSS*VGRPAC
Trigger: GCATGCAGGTCTGCCCACTCATGAGCTCTGGGTACC...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGGGAGAGAGAATGAGATaGAGTGGGCAAACCAGACAG +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPGERMR*SGQTRQ
Trigger: CTGTCTGGTTTGCCCACTTCATCTCATTCTCTCTCC...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCTATAGCCCCAGCACCTaGTACCTAGCACAGAATAGG +
Preference number: 4 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGYSPST*YLAQNR
Trigger: CCTATTCTGTGCTAGGTATCAGGTGCTGGGGCTATA...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCAAAGCTGGTCACAACTaGCCGCACCTCCACCAGATT +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPKAGHN*PHLHQI
Trigger: AATCTGGTGGAGGTGCGGTCAGTTGTGACCAGCTTT...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCATTCTTCAGGAAAGGGTaGGCCCTGCAACTCGACAAA +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAFFRKG*ALQLDK
Trigger: TTTGTCGAGTTGCAGGGCTCACCCTTTCCTGAAGAA...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGAAAGGCACTCCAGCCTaGAGAAACTGCCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPKGTPA*RNCPRR
Trigger: TCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCTTT...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGAAAGGCACTCCAGCCTaGAGAAACTGCCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEKGTPA*RNCPRR
Trigger: TCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCTTT...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCCCCACCTCAGCCTTCTaGGTAGCTGTGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSPTSAF*VAVTTG
Trigger: ACCTGTGGTCACAGCTACTCAGAAGGCTGAGGTGGG...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCCCACCTCAGCCTTCTaGGTAGCTGTGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESPTSAF*VAVTTG
Trigger: ACCTGTGGTCACAGCTACTCAGAAGGCTGAGGTGGG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAGCCATGGCCAGTAGGTaGGAGGTAAGGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAAMASR*EVRRFH
Trigger: ATGAAATCTCCTTACCTCTCACCTACTGGCCATGGC...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAAACCAGGTCCCCGTCTaGGGGAATGGGATTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPNQVPV*GNGIRS
Trigger: GCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTT...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATACAGATAATTGTGTGTaGGCAGCAGCTTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHTDNCV*AAACTG
Trigger: GCCAGTGCAAGCTGCTGCGCACACACAATTATCTGT...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCTCTCCACCCGGCCTTaGACTCGCAGGCTGCGTACA +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCLSTRP*TRRLRT
Trigger: TGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAG...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCCATGTCGGTCAAGCTaGAGAGCCATGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVPCRSS*RAMDSS
Trigger: GCTGCTGTCCATGGCTCTGCAGCTTGACCGACATGG...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCACAGGACGGCACTGCCTaGAATAAGGCTGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPQDGTA*NKAARA
Trigger: TGCCCTGGCAGCCTTATTGCAGGCAGTGCCGTCCTG...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCAGGCCCAGCTCCTCCTaGTCGTTGATGCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESRPSSS*SLMHSW
Trigger: CCAGCTATGCATCAACGAGCAGGAGGAGCTGGGCCT...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGAAAGGCTCCACACCTaGAGGAGGGACTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCERLHT*RRDSLV
Trigger: GACCAAGGAGTCCCTCCTGCAGGTGTGGAGCCTTTC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGACCTCCTCTGGAAAGATaGTGTGCTCCTGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGPPLER*CAPDRA
Trigger: AGCCCTGTCAGGAGCACAGCATCTTTCCAGAGGAGG...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACTGTTTAGAAATGAATaGAGGGCCCAGATGAGCGGG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTALFRNE*RAQMSG
Trigger: CCCGCTCATCTGGGCCCTGCATTCATTTCTAAACAG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGTGGGCGACTCCGGGCTaGGCTGAACCGGCGATAACC +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGWATPG*AEPAIT
Trigger: GGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCA...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCGGGTACAGCAATATCTaGCAGCCACAGCCCTGTATT +
Preference number: 4 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGGYSNI*QPQPCI
Trigger: AATACAGGGCTGTGGCTGGCAGATATTGCTGTACCC...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATCCTGATTTTCCACTATaGCCTTCACATGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHPDFPL*PSHGCP
Trigger: GGGACAGCCATGTGAAGGGCATAGTGGAAAATCAGG...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTTTCTGGATTCTAGTGTaGCCTTACTGCCCCTCACTT +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPFWILV*PYCPSL
Trigger: AAGTGAGGGGCAGTAAGGGCACACTAGAATCCAGAA...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACGAGTGCTGGGCCAAGTaGAAGCTCCATGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHECWAK*KLHGKG
Trigger: ACCTTTGCCATGGAGCTTGCACTTGGCCCAGCACTC...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACCTGGGGGACAGGCTTTaGCAACTCACTGCTACAGTC +
Preference number: 4 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHLGDRL*QLTATV
Trigger: GACTGTAGCAGTGAGTTGGCAAAGCCTGTCCCCCAG...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGCTGGGATCAACGGAGTaGCTGCTGCTGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRLGSTE*LLLAVM
Trigger: CATCACAGCCAGCAGCAGGCACTCCGTTGATCCCAG...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTGGGAGGCTGACCTGCTaGAGCTCAGACATCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSGRLTC*SSDIRS
Trigger: TGACCTGATGTCTGAGCTGCAGCAGGTCAGCCTCCC...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCAGAGGGAGGCTGACCTaGTGCAGCTCAGACATCAGG +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESRGRLT*CSSDIR
Trigger: CCTGATGTCTGAGCTGCAGCAGGTCAGCCTCCCTCT...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCACATCCATTACCCACCTaGCTTCCGGAGCTCATCTCA +
Preference number: 4 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEAHPLPT*LPELIS
Trigger: TGAGATGAGCTCCGGAAGGCAGGTGGGTAATGGATG...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTACCTCCACCAGATTCGTaGCTGGCTTCCCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVPPPDS*LASLLV
Trigger: CACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGG...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCAAAGAGATGGAGCAGTaGTGGGCTCTGGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPKEMEQ*WALENG
Trigger: CCCATTCTCCAGAGCCCAGCACTGCTCCATCTCTTT...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGGGACATAGTTCTGTCTaGAGCAACACCCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWGHSSV*SNTPIR
Trigger: TCTGATGGGGGTGTTGCTGCAGACAGAACTATGTCC...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATGGCCAGTGGGCTGTGTaGAGATATGACAAATGTCTC +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHGQWAV*RYDKCL
Trigger: GAGACATTTGTCATATCTGCACACAGCCCACTGGCC...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGACACAGCTGCCAAGCCTaGAACTTTGTGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGHSCQA*NFVQLQ
Trigger: CTGCAACTGCACAAAGTTGCAGGCTTGGCAGCTGTG...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAAGTGCCAGCTCCAGCTaGCATCCTGAGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPSASSS*HPEAPP
Trigger: TGGAGGTGCCTCAGGATGCCAGCTGGAGCTGGCACT...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGACAGCTGGAAGCGGATaGTCCTACCAGGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRTAGSG*SYQGPG
Trigger: CCCGGGGCCCTGGTAGGACCATCCGCTTCCAGCTGT...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTTCTGGGGGCAGTGGCTaGTTGCCCAGGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSSGGSG*LPRDWG
Trigger: GCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGA...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGCGGTTCTGGGGGCAGTaGCTGGTTGCCCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWRFWGQ*LVAQGL
Trigger: CAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCG...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCACCGTCACGTTTTCCTaGCGCACGGAGCTCGCATTG +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSTVTFS*RTELAL
Trigger: CAATGCGAGCTCCGTGCGCCAGGAAAACGTGACGGT...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCGAAGGGGGTCCTGGATaGGGACCCAGGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFEGGPG*GPRQGL
Trigger: CAGCCCCTGCCTGGGTCCCCATCCAGGACCCCCTTC...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTGGCTGGGCTGGACACTaGGGCTTGAACAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPGWAGH*GLNKGR
Trigger: CCTGCCCTTGTTCAAGCCCCAGTGTCCAGCCCAGCC...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATAAGGCCTCCAGCCCCTaGGCCAAGGACAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHKASSP*AKDREQ
Trigger: CTGTTCTCTGTCCTTGGCCCAGGGGCTGGAGGCCTT...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTGCGGGGTGAGCAGGTaGAGTAATCAGTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEECGVSR*SNQSGK
Trigger: TTTTCCTGACTGATTACTCCACCTGCTCACCCCGCA...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTGGAAGAGCTCGGTGCTaGCAAAGGAGCGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSGRARC*QRSGKD
Trigger: GTCCTTTCCGCTCCTTTGCCAGCACCGAGCTCTTCC...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCACAGCTGTGTCCCCTaGGAAGTGTGTATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCHSCVP*EVCMQG
Trigger: CCCCTGCATACACACTTCCCAGGGGACACAGCTGTG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGATGTGGCCGTGGGCCTaGGGAAGGTGGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGMWPWA*GRWAAK
Trigger: CTTGGCTGCCCACCTTCCCCAGGCCCACGGCCACAT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACATGTGGCCGTGGGCCTaGGGAAGGTGGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANMWPWA*GRWAAK
Trigger: CTTGGCTGCCCACCTTCCCCAGGCCCACGGCCACAT...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCCAGGGCGAAGAGACTaGGTCCAAGCAGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESPGRRD*VQAGSR
Trigger: TCTGGAACCTGCTTGGACCCAGTCTCTTCGCCCTGG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGCCCCGTGGTCAGTCTTaGCACGAGGGGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRPRGQS*HEGAAG
Trigger: TCCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGG...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCAGATGGGACCCCGTaGTCAGTCTTGGCACGAGGG +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCPDGTP*SVLARG
Trigger: CCCTCGTGCCAAGACTGACCACGGGGTCCCATCTGG...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGAGGGCTTTGTCTCCCTaGGAAGGAATCCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEERALSP*EGIHVL
Trigger: CAAGACATGGATTCCTTCCCAGGGAGACAAAGCCCT...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAGCTATTCCAATTTCCTaGGACCTCGGCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAAIPIS*DLGFLL
Trigger: CAGAAGGAAGCCGAGGTCCCAGGAAATTGGAATAGC...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATTGGAAATCCCGGGGATaGATGAAGTATGGACACTGG +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHWKSRG*MKYGHW
Trigger: CCAGTGTCCATACTTCATCCATCCCCGGGATTTCCA...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAATGACCCCTCCTCACTaGGAGGGATGCACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVMTPPH*EGCTPA
Trigger: AGCTGGGGTGCATCCCTCCCAGTGAGGAGGGGTCAT...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGACACCATCTCAGGGAATaGCACCACCATCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGHHLRE*HHHPQI
Trigger: GATTTGGGGATGGTGGTGCCATTCCCTGAGATGGTG...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCATGGCAGCGCTGAGCTaGGGGACAGGCTTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVMAALS*GTGFAN
Trigger: GTTGGCAAAGCCTGTCCCCCAGCTCAGCGCTGCCAT...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCGAGATGGAGCAGTGCTaGGCTCTGGAGAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESEMEQC*ALENGQ
Trigger: CTGCCCATTCTCCAGAGCCCAGCACTGCTCCATCTC...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGATGCCGCAGGGCCAGTaGGCTGTGTGCAGATATGAC +
Preference number: 4 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRMPQGQ*AVCRYD
Trigger: GTCATATCTGCACACAGCCCACTGGCCCTGCGGCAT...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGTGGTTCTCCTCCTTCTaGGCAGGTGGTAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRWFSSF*AGGRMP
Trigger: CGGCATCCTACCACCTGCCCAGAAGGAGGAGAACCA...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGAGCAGACTGTCTATGTaGCAGGGGAGCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQSRLSM*QGSKRQ
Trigger: CTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTTGGGCCTGGAGCCTATaGCATCCAAGGCGCAGAACT +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSWAWSL*HPRRRT
Trigger: AGTTCTGCGCCTTGGATGCCATAGGCTCCAGGCCCA...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGTGAAGCCGGGCTTATaGGCCTGGAGCCTATGGCAT +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCVKPGL*AWSLWH
Trigger: ATGCCATAGGCTCCAGGCCCATAAGCCCGGCTTCAC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp AAGGCCAAGGATCCCAACGTGGATAAGACTGTCGCATaGTTCTACGGGGTTGTGACGCCCTCGCTGAACCCC +
Preference number: 4 (lower is better)
Translates to: KAKDPNVDKTVA*FYGVVTPSLNP
Trigger: GGGGTTCAGCGAGGGCGTCACAACCCCGTAGAACAATGCGACAGTCTTATCCACGTTGGGATCCTTGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTGGAGAGGGTTTGCTCTaGGGGCCGGCCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSGEGLL*GPARNQ
Trigger: CTGGTTCCTGGCCGGCCCTCAGAGCAAACCCTCTCC...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCACCAGGGCCCCGGGATaGTGTTTCCACACGCACGTA +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLTRAPG*CFHTHV
Trigger: TACGTGCGTGTGGAAACATCATCCCGGGGCCCTGGT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCTCAAGGGCACCTCGTaGGTCAAGCATCCAAACACC +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSLKGTS*VKHPNT
Trigger: GGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAG...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCTCAAGGGCACCTCGTaGGTCAAGCATCCAAACACC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCLKGTS*VKHPNT
Trigger: GGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCAGGTGGCAGAAACATaGGGTTGCTCAGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSQVAET*GCSGRA
Trigger: TGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTG...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCTGGAAGGAAGGGCTGTaGTGGGGACTGCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLWKEGL*WGLQQG
Trigger: CCCTTGCTGCAGTCCCCATCACAGCCCTTCCTTCCA...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643932.2
CDS-3UTR TCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATAGGGCTGGCGGCAGCTaGAACCCAGACTTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHRAGGS*NPDLSL
Trigger: TAGACTCAAGTCTGGGTTTCAGCTGCCGCCAGCCCT...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGAGCACATCGTAGTCCATaGTGCAGAAAACCACGATGC +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGAHRSP*CRKPRC
Trigger: GCATCGTGGTTTTCTGCATCATGGACTACGATGTGC...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTAATGCAGGGCCCAGATaGGCGGGATCAGACTGTGTA +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSNAGPR*AGSDCV
Trigger: TACACAGTCTGATCCCGCTCATCTGGGCCCTGCATT...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCCAAAAGCCTAGGTCCTaGAGGGAACAGAAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGQKPRS*REQKRL
Trigger: AAGCCTTTTCTGTTCCCTTCAGGACCTAGGCTTTTG...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCGTTCAAGCATCCCAGTaGCCTGGCTCTATACGTCTT +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPVQASQ*PGSIRL
Trigger: AAGACGTATAGAGCCAGGTCACTGGGATGCTTGAAC...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGGAAGGTTTGCGGGACTaGATTGTCACTCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPEGLRD*IVTQKL
Trigger: AAGCTTCTGAGTGACAATTCAGTCCCGCAAACCTTC...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGACCTGCTTCTTCAGCCTaGTTTTCCACTATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGPASSA*FSTMPF
Trigger: GAAGGGCATAGTGGAAAATCAGGCTGAAGAAGCAGG...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATAACTGCTGGCCCAGCTaGGCTGTAACAGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHNCWPS*AVTASG
Trigger: GCCTGAAGCTGTTACAGCTCAGCTGGGCCAGCAGTT...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGACTCTGGGACTCAGGATaGCAAAACAGCTACCATTGG +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGLWDSG*QNSYHW
Trigger: CCAATGGTAGCTGTTTTGTCATCCTGAGTCCCAGAG...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCCCTGCAGATGTACCTaGCCCTGGCGCTGGGATCAA +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPPCRCT*PWRWDQ
Trigger: TTGATCCCAGCGCCAGGGTCAGGTACATCTGCAGGG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGAGCTCATCTCACCTaGCTCAGGGAGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWGAHLT*LREWGS
Trigger: GCTGCCCCACTCCCTGAGTCAGGTGAGATGAGCTCC...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCCCAAGGAACACTAGGTaGGCATCATCCATTACCCAC +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPPRNTR*ASSITH
Trigger: GTGGGTAATGGATGATGCTCACCTAGTGTTCCTTGG...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGAGTTGCTTGGCTTTCATaGCCACAGTTCAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGVAWLS*PQFSPV
Trigger: CACAGGACTGAACTGTGGTCATGAAAGCCAAGCAAC...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGCCTCCTAGGAATACCTaGCGCTGGCCTTTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGREPPRNT*RWPFPR
Trigger: CCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGG...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATCACCACAGCGCACAATaGCACAGAGGGATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHHHSAQ*HRGMAK
Trigger: CTTGGCCATCCCTCTGTGTCATTGTGCGCTGTGGTG...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCAGGGTGGTCAGTTTTATaGAGCCATCTGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEAGWSVL*SHLREG
Trigger: GCCTTCTCTCAGATGGCTTCATAAAACTGACCACCC...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCGAACCAGCTTCTATCTaGTGTCCCAGCCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSEPASI*CPSLCP
Trigger: TGGGCACAGGCTGGGACATCAGATAGAAGCTGGTTC...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTACAGAGCTTGAGTTGTaGAGGGGTGGGGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSTELEL*RGGALG
Trigger: TCCCAAAGCCCCACCCCTGCACAACTCAAGCTCTGT...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTGGCTGTGGGCACTCTTaGAACCGCACACACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCGCGHS*NRTHSW
Trigger: CCAGCTGTGTGTGCGGTTGCAAGAGTGCCCACAGCC...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGAGGTGTCCAGCTCGTTaGGCAGAGTCGGGCGCACTG +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGRCPAR*AESGAL
Trigger: CAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGCTTGCACTCGCAGGCTaGGTACAGATAATTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWLALAG*VQIIVC
Trigger: ACACACAATTATCTGTACGCAGCCTGCGAGTGCAAG...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGCATCTGCACTGTCGGTaGAGCCCCAGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRHLHCR*SPSLST
Trigger: GGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATG...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAATAGGTGAGCGCATCTaGACTGTCGGTGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPIGERI*TVGAAP
Trigger: TGGGGCTGCACCGACAGTGCAGATGCGCTCACCTAT...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACCAAAAGTTCCCCCTTaGTCCTTGAAGATGATGAGG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAPKVPP*SLKMMR
Trigger: CCTCATCATCTTCAAGGAGCAAGGGGGAACTTTTGG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTATTGATGACAGGGGGTaGCCCGGACCGGAAATACAC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCIDDRG*PGPEIH
Trigger: GTGTATTTCCGGTCCGGGGCACCCCCTGTCATCAAT...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACCCTGGGAAGTGTGTATaGAGGGGATTGATGACAGGG +
Preference number: 4 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHPGKCV*RGLMTG
Trigger: CCCTGTCATCAATCCCCTGCATACACACTTCCCAGG...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCAGCAAATACAGCACCTaGTTGACCACGGGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: ESRGQADCLCGRGARGRSSKYST*LTTGCK
Trigger: TTTACAGCCCGTGGTCAAGCAGGTGCTGTATTTGCT...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCCTCCTCTGGAAAGATaGTGTGCTCCTGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVPPLER*CAPDRA
Trigger: AGCCCTGTCAGGAGCACAGCATCTTTCCAGAGGAGG...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGCACAGCCCAGACGCTaGCTCTGGGAAGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGAQPRR*LWEGSL
Trigger: CAGGCTTCCTTCCCAGAGGCAGCGTCTGGGCTGTGC...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGCCTGAGACGTGTACCTaGTATTCCAATTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEPETCT*YSNFLG
Trigger: TCCCAGGAAATTGGAATAGCAGGTACACGTCTCAGG...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCTGGGCGACTCCGGGCTaGGCTGAACCGGCGATAACC +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFWATPG*AEPAIT
Trigger: GGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCA...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACATCTCAGGGAAGGGATaGCATGTGGACACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHISGKG*HVDTGD
Trigger: GTCACCAGTGTCCACATGGCATCCCTTCCCTGAGAT...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAAATATCAGTCTTTCCTaGCTCTGCATTCCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTANISLS*LCIPPC
Trigger: GCAAGGGGGAATGCAGAGGCAGGAAAGACTGATATT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCACACACAAAAGCATaGGCACATGCACTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSPHTKA*AHALAQ
Trigger: CTGGGCCAGTGCATGTGCGCATGCTTTTGTGTGTGG...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGCCAGCACTGTCATATTaGTGGCCCCCTTCCCTCCGG +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGREPALSY*WPPSLR
Trigger: CCGGAGGGAAGGGGGCCAGCAATATGACAGTGCTGG...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATTCCCTATGGAAGGTTTaGGGGACTGAATTGTCACTC +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHSLWKV*GTELSL
Trigger: GAGTGACAATTCAGTCCCGCAAACCTTCCATAGGGA...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGAGAATCTGCCCCCACCTaGTTCTTCAGCCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGESAPT*FFSLIF
Trigger: GAAAATCAGGCTGAAGAAGCAGGTGGGGGCAGATTC...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGGGTGACAGCTTCTCCTaGAGGTCACCAGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRGDSFS*RSPVTE
Trigger: CTCAGTGACTGGTGACCTGCAGGAGAAGCTGTCACC...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGAGTGCTGGGCCAAGTaGAAGCTCCATGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCECWAK*KLHGKG
Trigger: ACCTTTGCCATGGAGCTTGCACTTGGCCCAGCACTC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCAGGGCACCCCCATGTTaGTCATCTGCTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPRAPPC*SSAGSP
Trigger: TGGGGAGCCAGCAGATGAGCAACATGGGGGTGCCCT...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCGTGCATTCGCTATCTaGTGGGTGCCTGCTATTGGC +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSRAFAI*WVPAIG
Trigger: GCCAATAGCAGGCACCCAGCAGATAGCGAATGCACG...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGGGTGTGCATGAGGGATaGGGTGGAGGCAAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGGVHEG*GGGKAG
Trigger: TCCTGCCTTGCCTCCACCGCATCCCTCATGCACACC...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGGCTGTATCATTCTGTTaGGGTGTATGTGTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPAVSFC*GVCVGG
Trigger: CCCTCCAACACATACACCGCAACAGAATGATACAGC...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGACATCCTCATCTTCTCTaGCACACAGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGHPHLL*HTARKQ
Trigger: CTGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATG...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTGCAGGGGTGGGGCTTTaGGACGCAGACGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVAGVGL*DADAVT
Trigger: TGTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGC...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTAACCGCACACACAGCTaGAAGCGGATGGTCCTACCA +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSNRTHS*KRMVLP
Trigger: TGGTAGGACCATCCGCTTCCAGCTGTGTGTGCGGTT...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATTGGTTGCCCAGGGACTaGGGCATGTTCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHWLPRD*GMFMAA
Trigger: AGCTGCCATGAACATGCCCCAGTCCCTGGGCAACCA...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTAGGGGTTCCAAGGGATaGCGGTTCTGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVRGSKG*RFWGQW
Trigger: CCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCT...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGCATATCGACTCCGAATaGCCAGGACCACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLHIDSE*PGPQVA
Trigger: TGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATG...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTGGCTGGGACAGGGCCTaGGCTGGGATTTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVGWDRA*AGICDR
Trigger: CCTGTCACAAATCCCAGCCCAGGCCCTGTCCCAGCC...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCAGCAAACACTGGGAATaGGGCTGGGACAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPSKHWE*GWDRAW
Trigger: CCAGGCCCTGTCCCAGCCCCATTCCCAGTGTTTGCT...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCGCCTTAAGCAAACACTaGGAATGGGGCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSALSKH*EWGWDR
Trigger: CCTGTCCCAGCCCCATTCCCAGTGTTTGCTTAAGGC...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATGCTGAGATAATGGGTTaGGCTGGGCTGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHAEIMG*AGLDTG
Trigger: CCCAGTGTCCAGCCCAGCCCAACCCATTATCTCAGC...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCACTAGAGGGAGAGACTTaGGTAAACACAGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTALEGET*VNTEMR
Trigger: CCTCATCTCTGTGTTTACCCAAGTCTCTCCCTCTAG...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCAAGGCCTCCAGCCCCTaGGCCAAGGACAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLKASSP*AKDREQ
Trigger: CTGTTCTCTGTCCTTGGCCCAGGGGCTGGAGGCCTT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGATGCGGGGTGAGCAGGTaGAGTAATCAGTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGCGVSR*SNQSGK
Trigger: TTTTCCTGACTGATTACTCCACCTGCTCACCCCGCA...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAGGAAGAGCTCGGTGCTaGCAAAGGAGCGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVGRARC*QRSGKD
Trigger: GTCCTTTCCGCTCCTTTGCCAGCACCGAGCTCTTCC...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCCCTTGACAGAGATGTaGCCGTGGGCCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVPLTEM*PWAWGR
Trigger: CCTTCCCCAGGCCCACGGCCACATCTCTGTCAAGGG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGCCCTTGACAGAGATGTaGCCGTGGGCCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWPLTEM*PWAWGR
Trigger: CCTTCCCCAGGCCCACGGCCACATCTCTGTCAAGGG...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCCAGATGGGACCCCGTaGTCAGTCTTGGCACGAGGG +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVPDGTP*SVLARG
Trigger: CCCTCGTGCCAAGACTGACCACGGGGTCCCATCTGG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGAGGGCTCCAGGTCCCTaGAAGAGTTTTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQRAPGP*KSFVSL
Trigger: CAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTGTAGGAGTTCAGGCCTaGGCGACTCCGGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSVGVQA*ATPGCA
Trigger: AGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTAC...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGGACTTGAGTCTAGGCTaGGTAGGAGTTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLDLSLG*VGVQAW
Trigger: CCAGGCCTGAACTCCTACCCAGCCTAGACTCAAGTC...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000650015.1
CDS-3UTR CCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCATGGAAATCCCGGGGATaGATGAAGTATGGACACTGG +
Preference number: 4 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEAWKSRG*MKYGHW
Trigger: CCAGTGTCCATACTTCATCCATCCCCGGGATTTCCA...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCACGGGTCTCCACATATaGCCCAGAAGTGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVTGLHI*PRSGRE
Trigger: CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGT...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTCTCACTACTCACTTaGCCACACCATTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEFSLLT*PHHSLL
Trigger: GAGCAGAGAATGGTGTGGCCAAGTGAGTAGTGAGAA...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCCATGCGCACATGCACTaGCCCAGGCACACTGAACTA +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSHAHMH*PRHTEL
Trigger: TAGTTCAGTGTGCCTGGGCCAGTGCATGTGCGCATG...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGGCCTGGAGACAGGCCTaGTTCAGCGGCTACGTCCAG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRAWRQA*FSGYVQ
Trigger: CTGGACGTAGCCGCTGAACCAGGCCTGTCTCCAGGC...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGCAGAACATCACCCTGTaGGGATTGAGCCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRQNITL*GLSPVL
Trigger: CAGCACAGGGCTCAATCCCCACAGGGTGATGTTCTG...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCAGAACATCACCCTGTaGGGATTGAGCCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSQNITL*GLSPVL
Trigger: CAGCACAGGGCTCAATCCCCACAGGGTGATGTTCTG...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAGCTAAAACTGGCCTGTaGGGACATCTCCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGAKTGL*GHLPQC
Trigger: GCATTGAGGGAGATGTCCCCACAGGCCAGTTTTAGC...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGCCCAGAGCTCATGAGTaGGCAGACCTGCATGCAGAT +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLPRAHE*ADLHAD
Trigger: ATCTGCATGCAGGTCTGCCCACTCATGAGCTCTGGG...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATCACCAGATTCGTGCCTaGCTTCCCTCCTCGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHHQIRA*LPSSCD
Trigger: GTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTG...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTACAAAGGTGCGGAGCTaGGAAAAGAGATGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPTKVRS*EKRWFL
Trigger: AAGAAACCATCTCTTTTCCCAGCTCCGCACCTTTGT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCGCCCAAGAAGAGGGATaGGACTGGAGCACACAGGCT +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVAQEEG*DWSTQA
Trigger: AGCCTGTGTGCTCCAGTCCCATCCCTCTTCTTGGGC...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGATTGCGGTGTATGTGTTaGAGGGGGAAGGGGGAATTG +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGLRCMC*RGKGEL
Trigger: CAATTCCCCCTTCCCCCTCCAACACATACACCGCAA...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTGCAAACAGGAGACTaGCACTGCCCAAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVLQTGD*HCPKPF
Trigger: GAAGGGCTTTGGGCAGTGCCAGTCTCCTGTTTGCAG...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGCTGCAAACAGGAGACTaGCACTGCCCAAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLLQTGD*HCPKPF
Trigger: GAAGGGCTTTGGGCAGTGCCAGTCTCCTGTTTGCAG...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCAGGGCCACAAGCCAATaGTTTCGTGTGCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPRATSQ*FRVLVL
Trigger: TAGAACCAGCACACGAAACCATTGGCTTGTGGCCCT...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTAACATTGTTAACAAGTaGAAGAGCTGGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPNIVNK*KSWGLD
Trigger: GTCCAAGCCCCAGCTCTTCCACTTGTTAACAATGTT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGCCGGGCTTATGGGCCTaGAGCCTATGGCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALPGLWA*SLWHPR
Trigger: CCTTGGATGCCATAGGCTCCAGGCCCATAAGCCCGG...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGATCCTTACGGCAATCCTaGAAGGAGACACCCCATTTC +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGSLRQS*KETPHF
Trigger: GAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGA...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp CTGAGACAAGTCAGGAGACAACCAAGGATTCCCATTTaGGGAGCCTGGAGACAGGCCTGGTTCAGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: LRQVRRQPRIPI*GAWRQAWFSGY
Trigger: GTAGCCGCTGAACCAGGCCTGTCTCCAGGCTCCCAAAATGGGAATCCTTGGTTGTCTCCTGACTTGTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp GTGAAAGCTGCCGTCCTAACTCTGCTGAGAGGAGGTTaGCTCTCCAGGAAAGCATCCCACTGCTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VKAAVLTLLRGG*LSRKASHCYCC
Trigger: GCAGCAGTAGCAGTGGGATGCTTTCCTGGAGAGCAAACCTCCTCTCAGCAGAGTTAGGACGGCAGCTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp TTTGTGTTCTGCCTGGGCATCTACTCCGTGAATGTGTaGGGGAACGCCCTCCTCATAGGGCTGAACGTGCTG +
Preference number: 4 (lower is better)
Translates to: FVFCLGIYSVNV*GNALLIGLNVL
Trigger: CAGCACGTTCAGCCCTATGAGGAGGGCGTTCCCCAACACATTCACGGAGTAGATGCCCAGGCAGAACACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTGACCTTGTACAGGGCTaGGCGATTGTGTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCDLVQG*AIVWGE
Trigger: CTCTCCCCACACAATCGCTCAGCCCTGTACAAGGTC...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATCAGGTGGCAGAAACATaGGGTTGCTCAGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHQVAET*GCSGRA
Trigger: TGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTG...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCCCACACTGCCCGCAATaGGCATATGCCAAATGCTGT +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSPHCPQ*AYAKCC
Trigger: ACAGCATTTGGCATATGCTCATTGCGGGCAGTGTGG...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAAGAGTTTTGTGTCCTTaGGAAAGACTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTARVLCP*ERLHVL
Trigger: GAGGACATGGAGTCTTTCTCAAGGACACAAAACTCT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCAAGTATGGACACTGGTaGTCAGTGAGAATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPKYGHW*SVRMLS
Trigger: GGAGAGCATTCTCACTGATCACCAGTGTCCATACTT...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCACTTCACCACCGTGTaGGCTCCTTCAGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPHFTTV*APSGQD
Trigger: ATCCTGCCCTGAAGGAGCTCACACGGTGGTGAAGTG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGAACTGCTGGCCCAGCTaGGCTGTAACAGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGRENCWPS*AVTASG
Trigger: GCCTGAAGCTGTTACAGCTCAGCTGGGCCAGCAGTT...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCTGGCTTTCTTTATCCTaGCCATCTATCCTTCACGGG +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPWLSLS*PSILHG
Trigger: CCCGTGAAGGATAGATGGTCAGGATAAAGAAAGCCA...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAGACTACCACACCAGCTaGCAGTGTCAACCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVDYHTS*QCQPKS
Trigger: GCTCTTGGGTTGACACTGTCAGCTGGTGTGGTAGTC...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCGACTACCACACCAGCTaGCAGTGTCAACCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVDYHTS*QCQPKS
Trigger: GCTCTTGGGTTGACACTGTCAGCTGGTGTGGTAGTC...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAGTTGCTTGGCTTTCATaGCCACAGTTCAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGVAWLS*PQFSPV
Trigger: CACAGGACTGAACTGTGGTCATGAAAGCCAAGCAAC...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTAAAGCTGGTCACAACTaGCCGCACCTCCACCAGATT +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSKAGHN*PHLHQI
Trigger: AATCTGGTGGAGGTGCGGTCAGTTGTGACCAGCTTT...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGGCAGCACTTGCTGCATaGGGTGCTGGTAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGAALAA*GAGRKE
Trigger: CTCCTTCCTACCAGCACCTCATGCAGCAAGTGCTGC...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAGAACCAGCTTCTATCTaGTGTCCCAGCCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPEPASI*CPSLCP
Trigger: TGGGCACAGGCTGGGACATCAGATAGAAGCTGGTTC...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACGACCCTAGTCCCGTCTaGCTCCAGGGCCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANDPSPV*LQGHPH
Trigger: ATGAGGATGGCCCTGGAGTCAGACGGGACTAGGGTC...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGGAACAGGTCACTGCTaGATCCCCCAGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGGTGHC*IPQAQG
Trigger: CCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCC...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCTTTGGAACAGGTCACTaGTGCATCCCCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVFGTGH*CIPQAQ
Trigger: TTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAA...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGTTTGGAACAGGTCACTaGTGCATCCCCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLFGTGH*CIPQAQ
Trigger: TTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAA...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGAACCAGGTCCCCGTCTaGGGGAATGGGATTCGCAGC +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGNQVPV*GNGIRS
Trigger: GCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGACAGATAATTGTGTGTaGGCAGCAGCTTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQTDNCV*AAACTG
Trigger: GCCAGTGCAAGCTGCTGCGCACACACAATTATCTGT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTATAGGTGAGCGCATCTaGACTGTCGGTGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPIGERI*TVGAAP
Trigger: TGGGGCTGCACCGACAGTGCAGATGCGCTCACCTAT...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGATAGGTGAGCGCATCTaGACTGTCGGTGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGREIGERI*TVGAAP
Trigger: TGGGGCTGCACCGACAGTGCAGATGCGCTCACCTAT...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCACCAAAAGTTCCCCCTTaGTCCTTGAAGATGATGAGG +
Preference number: 4 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEAPKVPP*SLKMMR
Trigger: CCTCATCATCTTCAAGGAGCAAGGGGGAACTTTTGG...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCTGGGAAGTGTGTATaGAGGGGATTGATGACAGGG +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSPGKCV*RGLMTG
Trigger: CCCTGTCATCAATCCCCTGCATACACACTTCCCAGG...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCTGCAGAAAACCACGATaGCTGGCTGGTCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVCRKPR*LAGHRH
Trigger: ATGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCA...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTTGCAGAAAACCACGATaGCTGGCTGGTCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCCRKPR*LAGHRH
Trigger: ATGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCA...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTGAAAGGCTCCACACCTaGAGGAGGGACTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPERLHT*RRDSLV
Trigger: GACCAAGGAGTCCCTCCTGCAGGTGTGGAGCCTTTC...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCCCTCCTCTGGAAAGATaGTGTGCTCCTGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVPPLER*CAPDRA
Trigger: AGCCCTGTCAGGAGCACAGCATCTTTCCAGAGGAGG...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGATCTCAGGGAAGGGATaGCATGTGGACACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLISGKG*HVDTGD
Trigger: GTCACCAGTGTCCACATGGCATCCCTTCCCTGAGAT...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATGGTGACAGCTTCTCCTaGAGGTCACCAGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHGDSFS*RSPVTE
Trigger: CTCAGTGACTGGTGACCTGCAGGAGAAGCTGTCACC...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGTTGGGAGGTGGAGGCTaGAGTGAGCTGAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGLGGGG*SELRWR
Trigger: GCGCCATCTCAGCTCACTGCAGCCTCCACCTCCCAA...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTTCCTTCACGGGCTGCTaGCAAGTTAATCGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCSFTGC*QVNRPK
Trigger: CTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGA...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTATCCTTCACGGGCTaGTGCCAAGTTAATCGTCCC +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVLSFTG*CQVNRP
Trigger: GGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAG...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCTGCAGAGGTGAAAGCTaGCGTCCTAACTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVCRGES*RPNSAE
Trigger: CTCAGCAGAGTTAGGACGGCAGCTTTCACCTCTGCA...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGTGCAGAGGTGAAAGCTaGCGTCCTAACTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLCRGES*RPNSAE
Trigger: CTCAGCAGAGTTAGGACGGCAGCTTTCACCTCTGCA...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGGACATCTCCCTCAATaGGCTGGCATTAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCGHLPQ*AGINGG
Trigger: GCCACCATTAATGCCAGCGCATTGAGGGAGATGTCC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTATGAGTGGGCAGACCTaGATGCAGATGGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCMSGQT*MQMAAL
Trigger: CAGCGCTGCCATCTGCATGCAGGTCTGCCCACTCAT...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCGTTATGTGGCTATCTaGCAGCCGCTTAGGTACCCA +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSRYVAI*QPLRYP
Trigger: TGGGTACCTAAGCGGCTGGCAGATAGCCACATAACG...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCTGGGATCAACGGAGTaGCTGCTGCTGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPLGSTE*LLLAVM
Trigger: CATCACAGCCAGCAGCAGGCACTCCGTTGATCCCAG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGACTGAGAAGGCCAGATTaGAGATCTGAAGTCCAACTC +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGLRRPD*RSEVQL
Trigger: GAGTTGGACTTCAGATCTGCAATCTGGCCTTCTCAG...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATGGCCAGAAAGTAAGTTaGTTGGCTTTCATGACCACA +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHGQKVS*LAFMTT
Trigger: TGTGGTCATGAAAGCCAAGCAACTTACTTTCTGGCC...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCTCGCTATCTGCTGGGTaGCTGCTATTGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESSLSAG*LLLAAL
Trigger: AAGTGCTGCCAATAGCAGGCACCCAGCAGATAGCGA...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTACGTGCATTCGCTATCTaGTGGGTGCCTGCTATTGGC +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVRAFAI*WVPAIG
Trigger: GCCAATAGCAGGCACCCAGCAGATAGCGAATGCACG...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATACAAAAGCCCTCAAATaGCTCCGCCAGGCCCACTTG +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHTKALK*LRQAHL
Trigger: CAAGTGGGCCTGGCGGAGGCATTTGAGGGCTTTTGT...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAAGGTGCAAACCACCATaGCTAGGATCAGGATTTTTG +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTARCKPP*LGSGFL
Trigger: CAAAAATCCTGATCCTAGGCATGGTGGTTTGCACCT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGGCCATTGCACCCACATaGAGAGGAGCTGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGAIAPT*RGAAQQ
Trigger: CTGCTGAGCAGCTCCTCTGCATGTGGGTGCAATGGC...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAAACCGCACACACAGCTaGAAGCGGATGGTCCTACCA +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPNRTHS*KRMVLP
Trigger: TGGTAGGACCATCCGCTTCCAGCTGTGTGTGCGGTT...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATAACCGCACACACAGCTaGAAGCGGATGGTCCTACCA +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHNRTHS*KRMVLP
Trigger: TGGTAGGACCATCCGCTTCCAGCTGTGTGTGCGGTT...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCAGGGGTTCCAAGGGATaGCGGTTCTGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFRGSKG*RFWGQW
Trigger: CCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCTCAGGAACATGGAAGTaGAAGAGCTCGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSSGTWK*KSSVLA
Trigger: TGCCAGCACCGAGCTCTTCCACTTCCATGTTCCTGA...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGTCAGGAACATGGAAGTaGAAGAGCTCGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLSGTWK*KSSVLA
Trigger: TGCCAGCACCGAGCTCTTCCACTTCCATGTTCCTGA...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGTGTCCTCAGGAACATaGAAGTGGAAGAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVVSSGT*KWKSSV
Trigger: CACCGAGCTCTTCCACTTCCATGTTCCTGAGGACAC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCGTGTCCTCAGGAACATaGAAGTGGAAGAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSVSSGT*KWKSSV
Trigger: CACCGAGCTCTTCCACTTCCATGTTCCTGAGGACAC...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCACAGCTGTGTCCCCTaGGAAGTGTGTATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPHSCVP*EVCMQG
Trigger: CCCCTGCATACACACTTCCCAGGGGACACAGCTGTG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGCCAGGGCGAAGAGACTaGGTCCAAGCAGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALPGRRD*VQAGSR
Trigger: TCTGGAACCTGCTTGGACCCAGTCTCTTCGCCCTGG...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGTACTGTCCAGGCTGTaGCCAAGATCCCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGVLSRL*PRSPGR
Trigger: TCGCCCTGGGGATCTTGGCCACAGCCTGGACAGTAC...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATCCAGATGGGACCCCGTaGTCAGTCTTGGCACGAGGG +
Preference number: 4 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYPDGTP*SVLARG
Trigger: CCCTCGTGCCAAGACTGACCACGGGGTCCCATCTGG...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGAGACTCCACCTCCTCTaGAAAGATGCTGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLRLHLL*KDAVLL
Trigger: CAGGAGCACAGCATCTTTCCAGAGGAGGTGGAGTCT...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGGAGTTGCTGAGCCTCTaGGAAAATCTGGAAATTTGG +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEELLSL*ENLEIW
Trigger: CCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTC...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAACGGGTCTCCACATATaGCCCAGAAGTGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPTGLHI*PRSGRE
Trigger: CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGT...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCACAGCATGTTCCCTATaGAAGGTTTGCGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPTACSL*KVCGTE
Trigger: TTCAGTCCCGCAAACCTTCCATAGGGAACATGCTGT...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATTCCAGTTTGTCCTTCTaGATTCTAGTGTGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHSSLSF*ILVCPY
Trigger: GTAAGGGCACACTAGAATCCAGAAGGACAAACTGGA...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGAGTTTGCATGTGATTTaGAAGGCAAAAGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWSLHVI*KAKVGQ
Trigger: CTGGCCCACTTTTGCCTTCCAAATCACATGCAAACT...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGCAGTGGCCAACACAATaGCAACAGGAAGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLQWPTQ*QQEGTG
Trigger: TCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTG...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCACAAAACAGCTACCATTaGGAACACTGCTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEAQNSYH*EHCWSP
Trigger: TGGTGACCAGCAGTGTTCCCAATGGTAGCTGTTTTG...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGGGCTCCCAGGCCAGTTaGAGCTTTTTCCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQGSQAS*SFFQKA
Trigger: AGCTTTTTGGAAAAAGCTCCAACTGGCCTGGGAGCC...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTAGCTCTGCATGGCGATaGAGGTCACCTGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCSSAWR*RSPGRD
Trigger: GTCTCTCCCAGGTGACCTCCATCGCCATGCAGAGCT...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGCCAGGAGGCAAAGCTaGGTTTTGGAGTCGTGCATT +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVARRQS*VLESCI
Trigger: AATGCACGACTCCAAAACCCAGCTTTGCCTCCTGGC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCAGAAAGCTGGTGTCATaGAGGACACTGGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVRKLVS*RTLEPL
Trigger: CAAGGGCTCCAGTGTCCTCCATGACACCAGCTTTCT...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGATCACTGACACCTCCTaGCTGCGGGTCACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRITDTS*LRVTGG
Trigger: CCCTCCAGTGACCCGCAGCCAGGAGGTGTCAGTGAT...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCGTAACCTCGAACTCCTaGGCTCAAGTACTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSVTSNS*AQVLLP
Trigger: TGGGAGGAGTACTTGAGCCCAGGAGTTCGAGGTTAC...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGAACATTGTTAACAAGTaGAAGAGCTGGGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPNIVNK*KSWGLD
Trigger: GTCCAAGCCCCAGCTCTTCCACTTGTTAACAATGTT...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTGTGAAGCCGGGCTTATaGGCCTGGAGCCTATGGCAT +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCVKPGL*AWSLWH
Trigger: ATGCCATAGGCTCCAGGCCCATAAGCCCGGCTTCAC...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCTCAAGGGCACCTCGTaGGTCAAGCATCCAAACACC +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPLKGTS*VKHPNT
Trigger: GGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCTCAAGGGCACCTCGTaGGTCAAGCATCCAAACACC +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCLKGTS*VKHPNT
Trigger: GGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAG...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACAGGGCTGGCGGCAGCTaGAACCCAGACTTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANRAGGS*NPDLSL
Trigger: TAGACTCAAGTCTGGGTTTCAGCTGCCGCCAGCCCT...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGGCACATCGTAGTCCATaGTGCAGAAAACCACGATGC +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLAHRSP*CRKPRC
Trigger: GCATCGTGGTTTTCTGCATCATGGACTACGATGTGC...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCGCTCCTCCTGCTCGTTaGTGCATAGCTGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPAPPAR*CIAGNH
Trigger: GTGGTTACCAGCTATGCATCAACGAGCAGGAGGAGC...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGAAGAGCTTTACTGACTaGAGACCACAGGGAGTGATG +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQKSFTD*RPQGVM
Trigger: CATCACTCCCTGTGGTCTTCAGTCAGTAAAGCTCTT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGTTTCCCATTGCACTTTaGGATCGCTCTCTTTACATC +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPFPIAL*DRSLYI
Trigger: GATGTAAAGAGAGCGATCTCAAAGTGCAATGGGAAA...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCTTTCCCATTGCACTTTaGGATCGCTCTCTTTACATC +
Preference number: 4 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGFPIAL*DRSLYI
Trigger: GATGTAAAGAGAGCGATCTCAAAGTGCAATGGGAAA...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGCTAGGGAGGATCGCTTaGACTTGGGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWLGRIA*TWEVEA
Trigger: AGCCTCCACCTCCCAAGTTCAAGCGATCCTCCCTAG...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACTGGGCATCTACTCCGTaGATGTGTTGGGGAACGCCC +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANWASTP*MCWGTP
Trigger: GGGCGTTCCCCAACACATTCACGGAGTAGATGCCCA...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGCAGCACTTGCTGCATaGGGTGCTGGTAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWAALAA*GAGRKE
Trigger: CTCCTTCCTACCAGCACCTCATGCAGCAAGTGCTGC...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATTCCAGTGTCAGAATTTaGGATGGACATAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHSSVRI*DGHSSV
Trigger: GACAGAACTATGTCCATCTCAAATTCTGACACTGGA...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCAACCCACCATGTTACTaGTGTAGCTCTTCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGNPPCY*CSSSER
Trigger: TCTTTCTGAAGAGCTACATCAGTAACATGGTGGGTT...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGGGCTGTGTGCAGATATaGCAAATGTCTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLGCVQI*QMSPVA
Trigger: AGCCACAGGAGACATTTGTCATATCTGCACACAGCC...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCACAGAGCTTGAGTTGTaGAGGGGTGGGGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLTELEL*RGGALG
Trigger: TCCCAAAGCCCCACCCCTGCACAACTCAAGCTCTGT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAACGCACTGGCCAGCAGTaGTCGGGTGGGGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKRTGQQ*SGGDVV
Trigger: GACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCG...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCATTGATGACAGGGGGTaGCCCGGACCGGAAATACAC +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLIDDRG*PGPEIH
Trigger: GTGTATTTCCGGTCCGGGGCACCCCCTGTCATCAAT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCCATGTCGGTCAAGCTaGAGAGCCATGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVPCRSS*RAMDSS
Trigger: GCTGCTGTCCATGGCTCTGCAGCTTGACCGACATGG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCGCCGGCGGCGGACGCTaGGTACTGTCCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFAGGGR*VLSRLW
Trigger: CCACAGCCTGGACAGTACGCAGCGTCCGCCGCCGGC...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATCAGGACGGCACTGCCTaGAATAAGGCTGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYQDGTA*NKAARA
Trigger: TGCCCTGGCAGCCTTATTGCAGGCAGTGCCGTCCTG...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACGAAAGGCTCCACACCTaGAGGAGGGACTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANERLHT*RRDSLV
Trigger: GACCAAGGAGTCCCTCCTGCAGGTGTGGAGCCTTTC...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTCCTCTGGAAAGATaGTGTGCTCCTGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCPPLER*CAPDRA
Trigger: AGCCCTGTCAGGAGCACAGCATCTTTCCAGAGGAGG...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp TTCAAATGTTCCAATAGCTGTGGTCACTGCACTTTGTCCTCCAAGGTCTCCCAAGCACAGCCCAGACGCTaGCTCTGGGAAGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: FKCSNSCGHCTLSSKVSQAQPRR*LWEGSL
Trigger: CAGGCTTCCTTCCCAGAGGCAGCGTCTGGGCTGTGC...TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGACACCCCTCAGATACTaGAAATCGGGCTCAATAGGA +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQTPLRY*KSGSIG
Trigger: TCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAACACCCCTCAGATACTaGAAATCGGGCTCAATAGGA +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGTPLRY*KSGSIG
Trigger: TCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGT...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTCTTGTGATATTTCTTaGACACCTGAGACGTGTACC +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEESCDIS*TPETCT
Trigger: GGTACACGTCTCAGGTGTGCAAGAAATATCACAAGA...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCATCTTGTGATATTTCTTaGACACCTGAGACGTGTACC +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTASCDIS*TPETCT
Trigger: GGTACACGTCTCAGGTGTGCAAGAAATATCACAAGA...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGCTTCAAGGTGTGTCTaGATAGCCAAGGCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCASRCV*IAKALD
Trigger: GTCTAAGGCCTTGGCTATGCAGACACACCTTGAAGC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTGGCCACACCATTCTCTaGTCAGTGCCCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCGHTIL*SVPHGR
Trigger: TCTTCCATGGGGCACTGAGCAGAGAATGGTGTGGCC...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATCATGCCCCAGGCAGCTaGAAGTGCTCAGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYHAPGS*KCSGVS
Trigger: TGAGACCCCTGAGCACTTGCAGCTGCCTGGGGCATG...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGATCCCTATGGAAGGTTTaGGGGACTGAATTGTCACTC +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGSLWKV*GTELSL
Trigger: GAGTGACAATTCAGTCCCGCAAACCTTCCATAGGGA...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGGCTGGTGGGGCTTCTaGTCCGCATCATGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGGWWGF*SASWSS
Trigger: TGAAGACCATGATGCGGAGCAGAAGCCCCACCAGCC...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACGGCTGGTGGGGCTTCTaGTCCGCATCATGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANGWWGF*SASWSS
Trigger: TGAAGACCATGATGCGGAGCAGAAGCCCCACCAGCC...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCTGGGGGACAGGCTTTaGCAACTCACTGCTACAGTC +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPLGDRL*QLTATV
Trigger: GACTGTAGCAGTGAGTTGGCAAAGCCTGTCCCCCAG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTTCCCTCATGGACATCTaGGGCACCTCCTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCSLMDI*GTSSFV
Trigger: CACAAAGGAGGAGGTGCCGCAGATGTCCATGAGGGA...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCGTCCTGTTTGTGTTCTaGCTGGGCATCTACTCCGTG +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVVLFVF*LGIYSV
Trigger: CACGGAGTAGATGCCCAGGCAGAACACAAACAGGAC...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGAGGCCAGAAAGTAAGTTaGTTGGCTTTCATGACCACA +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGGQKVS*LAFMTT
Trigger: TGTGGTCATGAAAGCCAAGCAACTTACTTTCTGGCC...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTACAAAAGCCCTCAAATaGCTCCGCCAGGCCCACTTG +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCTKALK*LRQAHL
Trigger: CAAGTGGGCCTGGCGGAGGCATTTGAGGGCTTTTGT...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGGCCATTGCACCCACATaGAGAGGAGCTGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRAIAPT*RGAAQQ
Trigger: CTGCTGAGCAGCTCCTCTGCATGTGGGTGCAATGGC...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCACACAGCTGCCAAGCCTaGAACTTTGTGCAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPHSCQA*NFVQLQ
Trigger: CTGCAACTGCACAAAGTTGCAGGCTTGGCAGCTGTG...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGCCCAGGTCCCACAGCTaGCAAGCCTGCAACTTTGTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWPRSHS*QACNFV
Trigger: CACAAAGTTGCAGGCTTGGCAGCTGTGGGACCTGGG...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGTCCAAGGCGCAGAACTaGAACGTGACCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRSKAQN*NVTQYS
Trigger: TGAATACTGGGTCACGTTGCAGTTCTGCGCCTTGGA...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGAACCGCACACACAGCTaGAAGCGGATGGTCCTACCA +
Preference number: 4 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALNRTHS*KRMVLP
Trigger: TGGTAGGACCATCCGCTTCCAGCTGTGTGTGCGGTT...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGTGGTTGCCCAGGGACTaGGGCATGTTCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGWLPRD*GMFMAA
Trigger: AGCTGCCATGAACATGCCCCAGTCCCTGGGCAACCA...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCGGGAAGGGCCACACTTaGGCCAAAGAAGATGTAGAA +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESGKGHT*AKEDVE
Trigger: TTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCC...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTTCCACTGTCCAGCACTaGCAACAGCCTCATGGCGAA +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCSTVQH*QQPHGE
Trigger: TTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGA...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGACCGTCACGTTTTCCTaGCGCACGGAGCTCGCATTG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRTVTFS*RTELAL
Trigger: CAATGCGAGCTCCGTGCGCCAGGAAAACGTGACGGT...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGACCGTCACGTTTTCCTaGCGCACGGAGCTCGCATTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWTVTFS*RTELAL
Trigger: CAATGCGAGCTCCGTGCGCCAGGAAAACGTGACGGT...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCATGGGATTCGCAGCCTaGCAACCCTGGTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFMGFAA*QPWWWH
Trigger: GTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCAT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCATATCGACTCCGAATaGCCAGGACCACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCHIDSE*PGPQVA
Trigger: TGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATG...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCTGCGGGGTGAGCAGGTaGAGTAATCAGTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSCGVSR*SNQSGK
Trigger: TTTTCCTGACTGATTACTCCACCTGCTCACCCCGCA...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTGGAAGAGCTCGGTGCTaGCAAAGGAGCGGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVGRARC*QRSGKD
Trigger: GTCCTTTCCGCTCCTTTGCCAGCACCGAGCTCTTCC...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGAGTCACACTTTGGTCTaGGCAGTGGTCCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRSHTLV*AVVPKS
Trigger: ACTTTTGGGGACCACTGCCCAGACCAAAGTGTGACT...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAGTCACACTTTGGTCTaGGCAGTGGTCCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSSHTLV*AVVPKS
Trigger: ACTTTTGGGGACCACTGCCCAGACCAAAGTGTGACT...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCACAGCTGTGTCCCCTaGGAAGTGTGTATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVHSCVP*EVCMQG
Trigger: CCCCTGCATACACACTTCCCAGGGGACACAGCTGTG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTGTACTGTCCAGGCTGTaGCCAAGATCCCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSVLSRL*PRSPGR
Trigger: TCGCCCTGGGGATCTTGGCCACAGCCTGGACAGTAC...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTAAGTTCTCCATGTCCTaGGAAGGGCTCCAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCKFSMS*EGLQVP
Trigger: AGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTT...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCAGGGCTTTGTCTCCCTaGGAAGGAATCCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVRALSP*EGIHVL
Trigger: CAAGACATGGATTCCTTCCCAGGGAGACAAAGCCCT...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCAGACTCCACCTCCTCTaGAAAGATGCTGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVRLHLL*KDAVLL
Trigger: CAGGAGCACAGCATCTTTCCAGAGGAGGTGGAGTCT...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGGGGCTCAATAGGAATTaGGGAATAGGCATTAGAAAC +
Preference number: 4 (lower is better)
Translates to: KAGGRARACTHKSPQMPPGLNRN*GIGIRN
Trigger: GTTTCTAATGCCTATTCCCCAATTCCTATTGAGCCC...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCGCTATTCCAATTTCCTaGGACCTCGGCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSAIPIS*DLGFLL
Trigger: CAGAAGGAAGCCGAGGTCCCAGGAAATTGGAATAGC...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGGCTATTCCAATTTCCTaGGACCTCGGCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRAIPIS*DLGFLL
Trigger: CAGAAGGAAGCCGAGGTCCCAGGAAATTGGAATAGC...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTGACTTGAGTCTAGGCTaGGTAGGAGTTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPDLSLG*VGVQAW
Trigger: CCAGGCCTGAACTCCTACCCAGCCTAGACTCAAGTC...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000650015.1
CDS-3UTR CCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATGGAAGGGATGCCATGTaGACACTGGTGACCACAAAG +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHGRDAM*TLVTTK
Trigger: CTTTGTGGTCACCAGTGTCCACATGGCATCCCTTCC...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACGCACTGTCATATTGCTaGCCCCCTTCCCTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANALSYC*PPSLRE
Trigger: TTCCCGGAGGGAAGGGGGCCAGCAATATGACAGTGC...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATCAAGGATTCCCATTTTaGGAGCCTGGAGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHQGFPF*EPGDRP
Trigger: AGGCCTGTCTCCAGGCTCCCAAAATGGGAATCCTTG...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCTCAACCCAAGAGCTATaGGAGGTTTGGCTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGSTQEL*EVWLSL
Trigger: TAAAGAAAGCCAAACCTCCCATAGCTCTTGGGTTGA...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGGCTTCTACTCAGAAGTaGCTGTGTTGCCTCCACCTA +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLASTQK*LCCLHL
Trigger: TAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGC...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCACTGTAACCTGGAGGTaGTCCTGTTTGTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSTVTWR*SCLCSA
Trigger: GGCAGAACACAAACAGGACCACCTCCAGGTTACAGT...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCGGCTCCCAGGCCAGTTaGAGCTTTTTCCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESGSQAS*SFFQKA
Trigger: AGCTTTTTGGAAAAAGCTCCAACTGGCCTGGGAGCC...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGAGCTCTGCATGGCGATaGAGGTCACCTGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGSSAWR*RSPGRD
Trigger: GTCTCTCCCAGGTGACCTCCATCGCCATGCAGAGCT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCGCCAGGAGGCAAAGCTaGGTTTTGGAGTCGTGCATT +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVARRQS*VLESCI
Trigger: AATGCACGACTCCAAAACCCAGCTTTGCCTCCTGGC...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCATCCTGCACAGGCTCTaGAGAAAGCTGGTGTCATGG +
Preference number: 4 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVILHRL*RKLVSW
Trigger: CCATGACACCAGCTTTCTCCAGAGCCTGTGCAGGAT...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAAAAATGCAGTCAGGTaGTTTCCCACCCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSKNAVR*FPTLGL
Trigger: CAGGCCAAGGGTGGGAAACCACCTGACTGCATTTTT...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGGAAGAGGGATGGGACTaGAGCACACAGGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALEEGWD*STQALS
Trigger: GGACAAAGCCTGTGTGCTCCAGTCCCATCCCTCTTC...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGCCCAAGAAGAGGGATaGGACTGGAGCACACAGGCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWAQEEG*DWSTQA
Trigger: AGCCTGTGTGCTCCAGTCCCATCCCTCTTCTTGGGC...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATTTGCGGTGTATGTGTTaGAGGGGGAAGGGGGAATTG +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHLRCMC*RGKGEL
Trigger: CAATTCCCCCTTCCCCCTCCAACACATACACCGCAA...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAGGCAACCTGGTAACATaGCATTTTCTGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGGNLVT*HFLDTE
Trigger: CTCTGTGTCCAGAAAATGCCATGTTACCAGGTTGCC...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATGACAAATGTCTCCTGTaGCTCAGAGCAGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHDKCLL*LRAARA
Trigger: GGCTCTTGCTGCTCTGAGCCACAGGAGACATTTGTC...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGTGGTTCTCCTCCTTCTaGGCAGGTGGTAGGATGCCG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWWFSSF*AGGRMP
Trigger: CGGCATCCTACCACCTGCCCAGAAGGAGGAGAACCA...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACCGGAGATCGCTTAATTaGCTCCACTTCTCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHRRSLN*LHFSEG
Trigger: TCCTTCTGAGAAGTGGAGCCAATTAAGCGATCTCCG...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATACACACCAGCTGTGCTaGAACCCTGTAAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHTHQLC*NPVSEA
Trigger: AGCTTCACTTACAGGGTTTCAGCACAGCTGGTGTGT...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCAGGTGGCAGAAACATaGGGTTGCTCAGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVQVAET*GCSGRA
Trigger: TGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGGATGAGGGCAAAGGCTaGGATAATGGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRDEGKG*DNGLGW
Trigger: CCAGCCCAACCCATTATCTCAGCCTTTGCCCTCATC...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR TCA 90 bp TTCAAATGTTCCAATAGCTGTGGTCACTGCACTTTGTCCTCCAAGGTCTCCCAACCAGCTGAGGGTCAGTaGGAAAACCCCAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: FKCSNSCGHCTLSSKVSQPAEGQ*ENPRHS
Trigger: GCTGTGCCTGGGGTTTTCTCACTGACCCTCAGCTGG...TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGACGTTAAAGATGCCTaGGGTGCGGTTGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWDVKDA*GAVGQC
Trigger: ACACTGCCCAACCGCACCTCAGGCATCTTTAACGTC...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCAATACAGCACCTGCTTaGCCACGGGCTGTAAACGAG +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPNTAPA*PRAVNE
Trigger: CTCGTTTACAGCCCGTGGTCAAGCAGGTGCTGTATT...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCATCACAGAACCATTCTaGACCAATCAATCACTGGAG +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPITEPF*TNQSLE
Trigger: CTCCAGTGATTGATTGGTTCAGAATGGTTCTGTGAT...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGAATCACAGAACCATTCTaGACCAATCAATCACTGGAG +
Preference number: 4 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGITEPF*TNQSLE
Trigger: CTCCAGTGATTGATTGGTTCAGAATGGTTCTGTGAT...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAGCCCTGCTGATTCCCTaGGGGGCCCTCTTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKALLIP*GALFPH
Trigger: GTGGGGAAAGAGGGCCCCTCAGGGAATCAGCAGGGC...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTACTGTGTACAGGGTGTaGCAAAAGCCTCCGGCAGTA +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPTVYRV*QKPPAV
Trigger: TACTGCCGGAGGCTTTTGTCACACCCTGTACACAGT...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTAATGCAGGGCCCAGATaGGCGGGATCAGACTGTGTA +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVNAGPR*AGSDCV
Trigger: TACACAGTCTGATCCCGCTCATCTGGGCCCTGCATT...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATGCAGGGCCCAGATaGGCGGGATCAGACTGTGTA +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRNAGPR*AGSDCV
Trigger: TACACAGTCTGATCCCGCTCATCTGGGCCCTGCATT...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTGAAAGTCTGTCTCACTaGTTTAAATCATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QKPPAVAPISPADSLRGPESLSH*FKSSQH
Trigger: ATGCTGAGATGATTTAAATCAGTGAGACAGACTTTC...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGTCCCAAATGGACAAATaGTCTTTTCTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQSQMDK*SFLALR
Trigger: CCTGAGTGCCAGAAAAGATCATTTGTCCATTTGGGA...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATTGGGCATCTACTCCGTaGATGTGTTGGGGAACGCCC +
Preference number: 4 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYWASTP*MCWGTP
Trigger: GGGCGTTCCCCAACACATTCACGGAGTAGATGCCCA...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TTCAAATGTTCCAATAGCTGTGGTCACTGCACTTTGTCCTCCAAGGTCTCCCAATCCAGAGAGGGAGGCTaGCCTGCTGCAGCTCAGACA +
Preference number: 4 (lower is better)
Translates to: FKCSNSCGHCTLSSKVSQSREGG*PAAAQT
Trigger: TGTCTGAGCTGCAGCAGGTCAGCCTCCCTCTCTGGA...TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCATTCCTTAAGGAGAGATaGCCAGAAATCAAGCTTACA +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAFLKER*PEIKLT
Trigger: TGTAAGCTTGATTTCTGGTCATCTCTCCTTAAGGAA...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATTTCTTCAGGAAAGGGTaGGCCCTGCAACTCGACAAA +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHFFRKG*ALQLDK
Trigger: TTTGTCGAGTTGCAGGGCTCACCCTTTCCTGAAGAA...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCACCGAGTGAGTGAATaGATGACTGCAAACTCCATG +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESHRVSE*MTANSM
Trigger: CATGGAGTTTGCAGTCATTCATTCACTCACTCGGTG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTACGCAGAACTGCAACGTaGCCCAGTATTCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVRRTAT*PSIQIL
Trigger: GAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCG...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGACAGAGCTTGAGTTGTaGAGGGGTGGGGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRTELEL*RGGALG
Trigger: TCCCAAAGCCCCACCCCTGCACAACTCAAGCTCTGT...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCCGCACTGGCCAGCAGTaGTCGGGTGGGGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFRTGQQ*SGGDVV
Trigger: GACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCG...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTATGGGGACAGGAAGGTaGGCATCCGCACCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTMGTGR*ASAPRP
Trigger: CGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCAT...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATACAGATAATTGTGTGTaGGCAGCAGCTTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHTDNCV*AAACTG
Trigger: GCCAGTGCAAGCTGCTGCGCACACACAATTATCTGT...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCTTGCACTCGCAGGCTaGGTACAGATAATTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESLALAG*VQIIVC
Trigger: ACACACAATTATCTGTACGCAGCCTGCGAGTGCAAG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCAGCAAATACAGCACCTaGTTGACCACGGGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESSKYST*LTTGCK
Trigger: TTTACAGCCCGTGGTCAAGCAGGTGCTGTATTTGCT...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTCCATGTCGGTCAAGCTaGAGAGCCATGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSPCRSS*RAMDSS
Trigger: GCTGCTGTCCATGGCTCTGCAGCTTGACCGACATGG...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTACACCCCTCAGATACTaGAAATCGGGCTCAATAGGA +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCTPLRY*KSGSIG
Trigger: TCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGT...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGATCTTGTGATATTTCTTaGACACCTGAGACGTGTACC +
Preference number: 4 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGSCDIS*TPETCT
Trigger: GGTACACGTCTCAGGTGTGCAAGAAATATCACAAGA...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGCTGAGATCGCACCATTaGATTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALLRSHH*IPAWAT
Trigger: TGTTGCCCAGGCTGGAATGCAATGGTGCGATCTCAG...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGAGCTGGGCTTGGTGGTaGACACCTCTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGSWAWW*TPLIPA
Trigger: AGCTGGGATTAGAGGTGTGCACCACCAAGCCCAGCT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGATGCATCCTTTCCCATTaGACTTTGAGATCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGCILSH*TLRSLS
Trigger: AGAGAGCGATCTCAAAGTGCAATGGGAAAGGATGCA...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATGAATCTGCCCCCACCTaGTTCTTCAGCCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHESAPT*FFSLIF
Trigger: GAAAATCAGGCTGAAGAAGCAGGTGGGGGCAGATTC...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGTTCCACTGTGCTGAGTaGTGGGCCAAGTGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRFHCAE*WAKCKL
Trigger: GAGCTTGCACTTGGCCCAGCACTCAGCACAGTGGAA...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTGCTTTGCCAACTCACTaGTACAGTCCATCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSALPTH*YSPSLS
Trigger: AGACAAGGATGGACTGTAGCAGTGAGTTGGCAAAGC...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCGTCCTGTTTGTGTTCTaGCTGGGCATCTACTCCGTG +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLVLFVF*LGIYSV
Trigger: CACGGAGTAGATGCCCAGGCAGAACACAAACAGGAC...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGCTGAGAAGGCCAGATTaGAGATCTGAAGTCCAACTC +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLLRRPD*RSEVQL
Trigger: GAGTTGGACTTCAGATCTGCAATCTGGCCTTCTCAG...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCATCCATTACCCACCTaGCTTCCGGAGCTCATCTCA +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPHPLPT*LPELIS
Trigger: TGAGATGAGCTCCGGAAGGCAGGTGGGTAATGGATG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGGGAAAGGGTGAGCCCTaGAACTCGACAAATCGTGGA +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGREGKGEP*NSTNRG
Trigger: TCCACGATTTGTCGAGTTGCAGGGCTCACCCTTTCC...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAAGTGATAAAGAAAAATaGAGTCAGGTGGTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TAPVPAPSILQSLLHSTASDKEK*SQVVSH
Trigger: GTGGGAAACCACCTGACTGCATTTTTCTTTATCACT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGAGGTGCAAACCACCATaGCTAGGATCAGGATTTTTG +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQRCKPP*LGSGFL
Trigger: CAAAAATCCTGATCCTAGGCATGGTGGTTTGCACCT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTAAGAGCAGGTGTTACTaGAAACAGGAGACTGGCACT +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSKSRCY*KQETGT
Trigger: AGTGCCAGTCTCCTGTTTGCAGTAACACCTGCTCTT...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTGTCATAAGACGCCATTaGACCCACATGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCVIRRH*THMQRS
Trigger: GCTCCTCTGCATGTGGGTGCAATGGCGTCTTATGAC...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTCATCCTCATCTTCTCTaGCACACAGCCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPHPHLL*HTARKQ
Trigger: CTGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATG...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTGAGCAGGCCGGGCTGTaGGCACTCTTGCAACCGCAC +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTEQAGL*ALLQPH
Trigger: GTGCGGTTGCAAGAGTGCCCACAGCCCGGCCTGCTC...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATGGGAAGGGCCACACTTaGGCCAAAGAAGATGTAGAA +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHGKGHT*AKEDVE
Trigger: TTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCC...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGTCCACTGTCCAGCACTaGCAACAGCCTCATGGCGAA +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRSTVQH*QQPHGE
Trigger: TTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGA...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCACCGTCACGTTTTCCTaGCGCACGGAGCTCGCATTG +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFTVTFS*RTELAL
Trigger: CAATGCGAGCTCCGTGCGCCAGGAAAACGTGACGGT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACCATATCGACTCCGAATaGCCAGGACCACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANHIDSE*PGPQVA
Trigger: TGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATG...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCTAGAGGGAGAGACTTaGGTAAACACAGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCLEGET*VNTEMR
Trigger: CCTCATCTCTGTGTTTACCCAAGTCTCTCCCTCTAG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTTCAGGAACATGGAAGTaGAAGAGCTCGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCSGTWK*KSSVLA
Trigger: TGCCAGCACCGAGCTCTTCCACTTCCATGTTCCTGA...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACACACAGCTGTGTCCCCTaGGAAGTGTGTATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FDESRSLRQSWKETPHFTHSCVP*EVCMQG
Trigger: CCCCTGCATACACACTTCCCAGGGGACACAGCTGTG...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGAACCAATCAATCACTaGAGACACACAGACTCCACC +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCEPINH*RHTDST
Trigger: GGTGGAGTCTGTGTGTCTCCAGTGATTGATTGGTTC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGCACTGTGCTGAGTGCTaGGCCAAGTGCAAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRHCAEC*AKCKLH
Trigger: ATGGAGCTTGCACTTGGCCCAGCACTCAGCACAGTG...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCACCTACATTTCAGTaGCCAACACAATGGCAACAG +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSPPTFQ*PTQWQQ
Trigger: CTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGG...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCAAGGATCCCAACGTaGATAAGACTGTCGCATTGT +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSPRIPT*IRLSHC
Trigger: ACAATGCGACAGTCTTATCCACGTTGGGATCCTTGG...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGAGAATGAGATGAAGTaGGCAAACCAGACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVENEMK*ANQTAV
Trigger: CACAGCTGTCTGGTTTGCCCACTTCATCTCATTCTC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACACACCAGATTCGTGCCTaGCTTCCCTCCTCGTGTGAC +
Preference number: 4 (lower is better)
Translates to: FDESRSLRQSWKETPHFTHQIRA*LPSSCD
Trigger: GTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTG...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGCTCCCTTTGCAAAGCTaGTCACAACTGACCGCACCT +
Preference number: 4 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALLPLQS*SQLTAP
Trigger: AGGTGCGGTCAGTTGTGACCAGCTTTGCAAAGGGAG...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTATCCTGCACAGGCTCTaGAGAAAGCTGGTGTCATGG +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCILHRL*RKLVSW
Trigger: CCATGACACCAGCTTTCTCCAGAGCCTGTGCAGGAT...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACGAAGAGGGATGGGACTaGAGCACACAGGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANEEGWD*STQALS
Trigger: GGACAAAGCCTGTGTGCTCCAGTCCCATCCCTCTTC...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATTGGGCCTGGAGCCTATaGCATCCAAGGCGCAGAACT +
Preference number: 4 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYWAWSL*HPRRRT
Trigger: AGTTCTGCGCCTTGGATGCCATAGGCTCCAGGCCCA...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTACACACCAGCTGTGCTaGAACCCTGTAAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPTHQLC*NPVSEA
Trigger: AGCTTCACTTACAGGGTTTCAGCACAGCTGGTGTGT...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCCCCTGGTGGTGGCACTaGCAGAGAGGAGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFPWWWH*QRGGSR
Trigger: CCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGG...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCGCACATCGTAGTCCATaGTGCAGAAAACCACGATGC +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLAHRSP*CRKPRC
Trigger: GCATCGTGGTTTTCTGCATCATGGACTACGATGTGC...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTAATACAGCACCTGCTTaGCCACGGGCTGTAAACGAG +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVNTAPA*PRAVNE
Trigger: CTCGTTTACAGCCCGTGGTCAAGCAGGTGCTGTATT...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCGCCCTGCTGATTCCCTaGGGGGCCCTCTTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFALLIP*GALFPH
Trigger: GTGGGGAAAGAGGGCCCCTCAGGGAATCAGCAGGGC...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTTCCCAAATGGACAAATaGTCTTTTCTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCSQMDK*SFLALR
Trigger: CCTGAGTGCCAGAAAAGATCATTTGTCCATTTGGGA...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGAGGTTGCAGTGAGCTaGGATCGCACCATTGCATTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWEVAVS*DRTIAF
Trigger: GAATGCAATGGTGCGATCTCAGCTCACTGCAACCTC...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGGTTCAAGCATCCCAGTaGCCTGGCTCTATACGTCTT +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGREVQASQ*PGSIRL
Trigger: AAGACGTATAGAGCCAGGTCACTGGGATGCTTGAAC...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGCTGATCAAGGACTTTTaGCAGCTCCCATTACCATTA +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQLIKDF*QLPLPL
Trigger: TAATGGTAATGGGAGCTGTCAAAAGTCCTTGATCAG...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TTCAAATGTTCCAATAGCTGTGGTCACTGCACTTTGTCCTCCAAGGTCTCCCAAGCTCCATGGCAAAGGTaGCAGCTTCTCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FKCSNSCGHCTLSSKVSQAPWQR*QLLLQV
Trigger: GACCTGCAGGAGAAGCTGTCACCTTTGCCATGGAGC...TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGTATAGCCCCAGCACCTaGTACCTAGCACAGAATAGG +
Preference number: 4 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGYSPST*YLAQNR
Trigger: CCTATTCTGTGCTAGGTATCAGGTGCTGGGGCTATA...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCAAGTCACCGAGTGAGTaGATGAATGACTGCAAACTC +
Preference number: 4 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESKSPSE*MNDCKL
Trigger: GAGTTTGCAGTCATTCATTCACTCACTCGGTGACTT...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGGCCATGGCCAGTAGGTaGGAGGTAAGGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGREAMASR*EVRRFH
Trigger: ATGAAATCTCCTTACCTCTCACCTACTGGCCATGGC...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTACAGATAATTGTGTGTaGGCAGCAGCTTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPTDNCV*AAACTG
Trigger: GCCAGTGCAAGCTGCTGCGCACACACAATTATCTGT...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCCTGGGAAGTGTGTATaGAGGGGATTGATGACAGGG +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVPGKCV*RGLMTG
Trigger: CCCTGTCATCAATCCCCTGCATACACACTTCCCAGG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGTGCAGAAAACCACGATaGCTGGCTGGTCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWCRKPR*LAGHRH
Trigger: ATGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCA...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCAAGCAAATACAGCACCTaGTTGACCACGGGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPSKYST*LTTGCK
Trigger: TTTACAGCCCGTGGTCAAGCAGGTGCTGTATTTGCT...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACTCTTGTGATATTTCTTaGACACCTGAGACGTGTACC +
Preference number: 4 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHSCDIS*TPETCT
Trigger: GGTACACGTCTCAGGTGTGCAAGAAATATCACAAGA...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGTGCAGTTTTAACAGATaGAGCAACTCATGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQCSFNR*SNSCLV
Trigger: GACAAGGCATGAGTTGCTGCATCTGTTAAAACTGCA...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGCTCACACCTCCTCACTaGTTCTCACTACTCACTTGG +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGRELTPPH*FSLLTW
Trigger: CCAAGTGAGTAGTGAGAAGCAGTGAGGAGGTGTGAG...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGAGTCTTTCCTGCCTCTaGATTCCCCCTTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGSLSCL*IPPCCS
Trigger: GGAACAGCAAGGGGGAATGCAGAGGCAGGAAAGACT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAAGGCCCAACACCAAATaGAGAAGTAACAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: LLCHTARKQESQIQAFRGRPNTK*RSNSFA
Trigger: TGCAAAACTGTTACTTCTGCATTTGGTGTTGGGCCT...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGCTATCCTTCACGGGCTaGTGCCAAGTTAATCGTCCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWLSFTG*CQVNRP
Trigger: GGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAG...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACAGCTGTGACCACAGGTaGAAACCACCATGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANSCDHR*KPPCLG
Trigger: TCCTAGGCATGGTGGTTTGCACCTGTGGTCACAGCT...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCGGCCAGTGGGCTGTGTaGAGATATGACAAATGTCTC +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPGQWAV*RYDKCL
Trigger: GAGACATTTGTCATATCTGCACACAGCCCACTGGCC...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTGCAGGGGTGGGGCTTTaGGACGCAGACGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTAGVGL*DADAVT
Trigger: TGTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGC...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGGGGAAGGGCCACACTTaGGCCAAAGAAGATGTAGAA +
Preference number: 4 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGGKGHT*AKEDVE
Trigger: TTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCC...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAACTGGCAACAGCCTCATaGCGAACACGGCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKLATAS*RTRLGA
Trigger: AGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAG...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATTCCACTGTCCAGCACTaGCAACAGCCTCATGGCGAA +
Preference number: 4 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYSTVQH*QQPHGE
Trigger: TTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGA...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGTGTCCTCAGGAACATaGAAGTGGAAGAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGVSSGT*KWKSSV
Trigger: CACCGAGCTCTTCCACTTCCATGTTCCTGAGGACAC...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGAGGGCTCCAGGTCCCTaGAAGAGTTTTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGRAPGP*KSFVSL
Trigger: CAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCAAGTTCTCCATGTCCTaGGAAGGGCTCCAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFKFSMS*EGLQVP
Trigger: AGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTAGGGCTTTGTCTCCCTaGGAAGGAATCCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPRALSP*EGIHVL
Trigger: CAAGACATGGATTCCTTCCCAGGGAGACAAAGCCCT...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGGAGTTGCTGAGCCTCTaGGAAAATCTGGAAATTTGG +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLELLSL*ENLEIW
Trigger: CCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTC...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGGGGCTCAATAGGAATTaGGGAATAGGCATTAGAAAC +
Preference number: 4 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQGLNRN*GIGIRN
Trigger: GTTTCTAATGCCTATTCCCCAATTCCTATTGAGCCC...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTGCTATTCCAATTTCCTaGGACCTCGGCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCAIPIS*DLGFLL
Trigger: CAGAAGGAAGCCGAGGTCCCAGGAAATTGGAATAGC...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCGTAGGAGTTCAGGCCTaGGCGACTCCGGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFVGVQA*ATPGCA
Trigger: AGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTAC...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGCAAGGATTCCCATTTTaGGAGCCTGGAGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRQGFPF*EPGDRP
Trigger: AGGCCTGTCTCCAGGCTCCCAAAATGGGAATCCTTG...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCAAGACTACTGTTCTCTaGACACACCTGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLKTTVL*THLGFL
Trigger: GAGGAAGCCCAGGTGTGTCCAGAGAACAGTAGTCTT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGAGAAAGCTGGTGTCATaGAGGACACTGGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWRKLVS*RTLEPL
Trigger: CAAGGGCTCCAGTGTCCTCCATGACACCAGCTTTCT...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGATGAGGCTTCACACTTaGGGAATTCTTTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEEMRLHT*GILYFL
Trigger: CAAAAAGTAAAGAATTCCCCAAGTGTGAAGCCTCAT...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAGGCAACCTGGTAACATaGCATTTTCTGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPGNLVT*HFLDTE
Trigger: CTCTGTGTCCAGAAAATGCCATGTTACCAGGTTGCC...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAAGCCAAAATATTTGCTaGGGGACAGGGATAGGGACA +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVSQNIC*GTGIGT
Trigger: TGTCCCTATCCCTGTCCCCCAGCAAATATTTTGGCT...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTCGGGGGCCGGGGACCTaGGTAGGAGTTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESRGPGT*VGVQAW
Trigger: CCAGGCCTGAACTCCTACCCAGGTCCCCGGCCCCCG...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643932.2
3UTR CAA 72 bp CTGTACTCTGCTGACTCTGTCCAGAATCCCAGCTATTaGGGTTCAAGCATCCCAGTGACCTGGCTCTATACG +
Preference number: 4 (lower is better)
Translates to: LYSADSVQNPSY*GSSIPVTWLYT
Trigger: CGTATAGAGCCAGGTCACTGGGATGCTTGAACCCAAATAGCTGGGATTCTGGACAGAGTCAGCAGAGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp AACCTTGAGAGGCTTAAAGCCATTAAGGTTTGTTTCTaGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: NLERLKAIKVCF*LLMQVHQRLVG
Trigger: CCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAGAAACAAACCTTAATGGCTTTAAGCCTCTCAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAACATCCTGGAGACCCTTaGCAGAGATGTGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKHPGDP*QRCGRG
Trigger: CCCACGGCCACATCTCTGTCAAGGGTCTCCAGGATG...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTGCACATCGTAGTCCATaGTGCAGAAAACCACGATGC +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVAHRSP*CRKPRC
Trigger: GCATCGTGGTTTTCTGCATCATGGACTACGATGTGC...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCGAAAGTCTGTCTCACTaGTTTAAATCATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPESLSH*FKSSQH
Trigger: ATGCTGAGATGATTTAAATCAGTGAGACAGACTTTC...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTCTCAGAACTCAGCTATaGCCCTCATGGAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPLRTQL*PSWKEK
Trigger: CTTCTCTTTCCATGAGGGTCATAGCTGAGTTCTGAG...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCAAAAGCCTAGGTCCTaGAGGGAACAGAAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPQKPRS*REQKRL
Trigger: AAGCCTTTTCTGTTCCCTTCAGGACCTAGGCTTTTG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGGAAGGTTTGCGGGACTaGATTGTCACTCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGEGLRD*IVTQKL
Trigger: AAGCTTCTGAGTGACAATTCAGTCCCGCAAACCTTC...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCGATTCATCACTCTTCTaGTCAAGGACTTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSDSSLF*SRTFDS
Trigger: GCTGTCAAAAGTCCTTGATCAGAAGAGTGATGAATC...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCTCTGGGACTCAGGATaGCAAAACAGCTACCATTGG +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVLWDSG*QNSYHW
Trigger: CCAATGGTAGCTGTTTTGTCATCCTGAGTCCCAGAG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTGCTTCCCTCCTCGTGTaGCATCATTGTCAGTATCAT +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCASLLV*HHCQYH
Trigger: ATGATACTGACAATGATGTCACACGAGGAGGGAAGC...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATCTGAGCCTTGAAGGATaGGTAGAAAAGAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHLSLEG*VEKKGT
Trigger: AGTGCCTTTCTTTTCTACTCATCCTTCAAGGCTCAG...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCGCAGAACTGCAACGTaGCCCAGTATTCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVRRTAT*PSIQIL
Trigger: GAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTTGTTATTCTTTATTGTaGAAGGACAGGAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCCYSLL*KDRKGR
Trigger: CCTCCCCTTCCTGTCCTTTCACAATAAAGAATAACA...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCACTTCTGCTGCTTTATTaGAGGATGATTTTTAGTCTC +
Preference number: 4 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEALLLLY*RMIFSL
Trigger: GAGACTAAAAATCATCCTTCAATAAAGCAGCAGAAG...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTCTTGCACTCGCAGGCTaGGTACAGATAATTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPLALAG*VQIIVC
Trigger: ACACACAATTATCTGTACGCAGCCTGCGAGTGCAAG...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCCAAAAGTTCCCCCTTaGTCCTTGAAGATGATGAGG +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPPKVPP*SLKMMR
Trigger: CCTCATCATCTTCAAGGAGCAAGGGGGAACTTTTGG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGCTGTTTAGAAATGAATaGAGGGCCCAGATGAGCGGG +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRLFRNE*RAQMSG
Trigger: CCCGCTCATCTGGGCCCTGCATTCATTTCTAAACAG...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCCTGAGACGTGTACCTaGTATTCCAATTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPPETCT*YSNFLG
Trigger: TCCCAGGAAATTGGAATAGCAGGTACACGTCTCAGG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCCCTGAGACGTGTACCTaGTATTCCAATTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLPETCT*YSNFLG
Trigger: TCCCAGGAAATTGGAATAGCAGGTACACGTCTCAGG...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGAATATCAGTCTTTCCTaGCTCTGCATTCCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGNISLS*LCIPPC
Trigger: GCAAGGGGGAATGCAGAGGCAGGAAAGACTGATATT...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTGGGTACAGCAATATCTaGCAGCCACAGCCCTGTATT +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVGYSNI*QPQPCI
Trigger: AATACAGGGCTGTGGCTGGCAGATATTGCTGTACCC...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTTTGGGAGGTGGAGGCTaGAGTGAGCTGAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTLGGGG*SELRWR
Trigger: GCGCCATCTCAGCTCACTGCAGCCTCCACCTCCCAA...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTTCCTTCACGGGCTGCTaGCAAGTTAATCGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSSFTGC*QVNRPK
Trigger: CTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGA...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTCCCCTCTTGCTCATCTaGCTGTCTTACCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPPLLLI*LSYLFI
Trigger: GATGAAAAGGTAAGACAGGCAGATGAGCAAGAGGGG...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATGGACATCTCCCTCAATaGGCTGGCATTAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYGHLPQ*AGINGG
Trigger: GCCACCATTAATGCCAGCGCATTGAGGGAGATGTCC...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTCGTTATGTGGCTATCTaGCAGCCGCTTAGGTACCCA +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSRYVAI*QPLRYP
Trigger: TGGGTACCTAAGCGGCTGGCAGATAGCCACATAACG...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTCCTCCACCAGATTCGTaGCTGGCTTCCCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTPPPDS*LASLLV
Trigger: CACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGG...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCTCGCTATCTGCTGGGTaGCTGCTATTGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFSLSAG*LLLAAL
Trigger: AAGTGCTGCCAATAGCAGGCACCCAGCAGATAGCGA...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGGACATAGTTCTGTCTaGAGCAACACCCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGGHSSV*SNTPIR
Trigger: TCTGATGGGGGTGTTGCTGCAGACAGAACTATGTCC...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGGCTGTATCATTCTGTTaGGGTGTATGTGTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGREAVSFC*GVCVGG
Trigger: CCCTCCAACACATACACCGCAACAGAATGATACAGC...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTCAGAGTCGGGCGCACTaGCCAGCAGTGCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESQSRAH*PAVLGW
Trigger: CCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTG...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TTCAAATGTTCCAATAGCTGTGGTCACTGCACTTTGTCCTCCAAGGTCTCCCAACGGCCAGGGACTCTTTaGAACAGGTCACTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: FKCSNSCGHCTLSSKVSQRPGTL*NRSLLH
Trigger: ATGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCG...TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCCCCCGTCTGCGGGAATaGGATTCGCAGCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFPRLRE*DSQPGN
Trigger: GTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGG...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCATTTGTGACAGGGGGTaGAACGAGGGCCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFICDRG*NEGRGR
Trigger: CCGGCCTCGGCCCTCGTTCCACCCCCTGTCACAAAT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTGCGGGGTGAGCAGGTaGAGTAATCAGTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVCGVSR*SNQSGK
Trigger: TTTTCCTGACTGATTACTCCACCTGCTCACCCCGCA...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACAAGACTCCACCTCCTCTaGAAAGATGCTGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: FDESRSLRQSWKETPHFTRLHLL*KDAVLL
Trigger: CAGGAGCACAGCATCTTTCCAGAGGAGGTGGAGTCT...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTGAACCAATCAATCACTaGAGACACACAGACTCCACC +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPEPINH*RHTDST
Trigger: GGTGGAGTCTGTGTGTCTCCAGTGATTGATTGGTTC...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGGGGCTCAATAGGAATTaGGGAATAGGCATTAGAAAC +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLGLNRN*GIGIRN
Trigger: GTTTCTAATGCCTATTCCCCAATTCCTATTGAGCCC...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCAAGAAGGAATCCCAAATaGACAAATGATCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEARRNPK*TNDLFW
Trigger: CCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCT...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCGGAAGGGATGCCATGTaGACACTGGTGACCACAAAG +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFGRDAM*TLVTTK
Trigger: CTTTGTGGTCACCAGTGTCCACATGGCATCCCTTCC...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCATCCAGTTTGTCCTTCTaGATTCTAGTGTGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPSSLSF*ILVCPY
Trigger: GTAAGGGCACACTAGAATCCAGAAGGACAAACTGGA...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACATTTGGAAGGCAAAAGTaGGCCAGGTGTGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FDESRSLRQSWKETPHFTFGRQK*ARCGGS
Trigger: TGAGCCACCACACCTGGCCCACTTTTGCCTTCCAAA...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCTTTGGAAGGCAAAAGTaGGCCAGGTGTGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFFGRQK*ARCGGS
Trigger: TGAGCCACCACACCTGGCCCACTTTTGCCTTCCAAA...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAAGTTTGCATGTGATTTaGAAGGCAAAAGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPSLHVI*KAKVGQ
Trigger: CTGGCCCACTTTTGCCTTCCAAATCACATGCAAACT...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCAAAACAGCTACCATTaGGAACACTGCTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCQNSYH*EHCWSP
Trigger: TGGTGACCAGCAGTGTTCCCAATGGTAGCTGTTTTG...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGACGAGCACTGTAACCTaGAGGTGGTCCTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGTSTVT*RWSCLC
Trigger: ACACAAACAGGACCACCTCCAGGTTACAGTGCTCGT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTGAGAATGAGATGAAGTaGGCAAACCAGACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPENEMK*ANQTAV
Trigger: CACAGCTGTCTGGTTTGCCCACTTCATCTCATTCTC...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATTCCAAAAAGCTGGGTaGTCCAGATGGAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPFQKAG*SRWKRR
Trigger: TCTCCTTTTCCATCTGGACCACCCAGCTTTTTGGAA...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACAAGACTACTGTTCTCTaGACACACCTGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANKTTVL*THLGFL
Trigger: GAGGAAGCCCAGGTGTGTCCAGAGAACAGTAGTCTT...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCAAGCTGGGAAAAGAGATaGTTTCTTCAGGAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPSWEKR*FLQERV
Trigger: CACCCTTTCCTGAAGAAACCATCTCTTTTCCCAGCT...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGAGGGCCACAAGCCAATaGTTTCGTGTGCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWRATSQ*FRVLVL
Trigger: TAGAACCAGCACACGAAACCATTGGCTTGTGGCCCT...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGCGGAGATCGCTTAATTaGCTCCACTTCTCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALRRSLN*LHFSEG
Trigger: TCCTTCTGAGAAGTGGAGCCAATTAAGCGATCTCCG...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCAGCCAAAATATTTGCTaGGGGACAGGGATAGGGACA +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPSQNIC*GTGIGT
Trigger: TGTCCCTATCCCTGTCCCCCAGCAAATATTTTGGCT...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp AGTAAATATCAGTCTTTCCTGCCTCTGCATTCCCCCTaGCTGTTCCCTCTCCATGTCCAAACACGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SKYQSFLPLHSP*LFPLHVQTRGD
Trigger: GTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGGGGAATGCAGAGGCAGGAAAGACTGATATTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp CCAGCTGACAGTGTCAACCCAAGAGCTATGGGAGGTTaGGCTTTCTTTATCCTGACCATCTATCCTTCACGG +
Preference number: 4 (lower is better)
Translates to: PADSVNPRAMGG*AFFILTIYPSR
Trigger: CCGTGAAGGATAGATGGTCAGGATAAAGAAAGCCAAACCTCCCATAGCTCTTGGGTTGACACTGTCAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp ACACAATGGCAACAGGAAGGCACAGGACCACACCTATaGTTAAGGGGGAAAAGCACACTATCGTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TQWQQEGTGPHL*LRGKSTLSCVW
Trigger: CCAGACACACGATAGTGTGCTTTTCCCCCTTAACAATAGGTGTGGTCCTGTGCCTTCCTGTTGCCATTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp AGGTCCCACAGCTGCCAAGCCTGCAACTTTGTGCAGTaGCAGAGTTTGAACTTTAAATTGGGCAGGGACCAT +
Preference number: 4 (lower is better)
Translates to: RSHSCQACNFVQ*QSLNFKLGRDH
Trigger: ATGGTCCCTGCCCAATTTAAAGTTCAAACTCTGCAACTGCACAAAGTTGCAGGCTTGGCAGCTGTGGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACAAGAGCTTTACTGACTaGAGACCACAGGGAGTGATG +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANKSFTD*RPQGVM
Trigger: CATCACTCCCTGTGGTCTTCAGTCAGTAAAGCTCTT...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAGATTCATCACTCTTCTaGTCAAGGACTTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVDSSLF*SRTFDS
Trigger: GCTGTCAAAAGTCCTTGATCAGAAGAGTGATGAATC...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTCTAGGGAGGATCGCTTaGACTTGGGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTLGRIA*TWEVEA
Trigger: AGCCTCCACCTCCCAAGTTCAAGCGATCCTCCCTAG...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATAGAGAAGTTTGCATGTaGTTTGGAAGGCAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHREVCM*FGRQKW
Trigger: CCACTTTTGCCTTCCAAATCACATGCAAACTTCTCT...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCTCCAGAGAGGGAGGCTaGCCTGCTGCAGCTCAGACA +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFSREGG*PAAAQT
Trigger: TGTCTGAGCTGCAGCAGGTCAGCCTCCCTCTCTGGA...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATCCAAGGAACACTAGGTaGGCATCATCCATTACCCAC +
Preference number: 4 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYPRNTR*ASSITH
Trigger: GTGGGTAATGGATGATGCTCACCTAGTGTTCCTTGG...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCACAGTTCAGTCCTGTaGCCAGTAACTCTATTGAGA +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCHSSVL*PVTLLR
Trigger: TCTCAATAGAGTTACTGGTCACAGGACTGAACTGTG...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTGCTTCCCTCCTCGTGTaGCATCATTGTCAGTATCAT +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVASLLV*HHCQYH
Trigger: ATGATACTGACAATGATGTCACACGAGGAGGGAAGC...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAATTTCCCGAGGAGAAGTaGGAGCAGCTCTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKFPEEK*EQLCMA
Trigger: CGCCATGCAGAGCTGCTCTCACTTCTCCTCGGGAAA...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCACCGAGTGAGTGAATaGATGACTGCAAACTCCATG +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVHRVSE*MTANSM
Trigger: CATGGAGTTTGCAGTCATTCATTCACTCACTCGGTG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCAAGTCACCGAGTGAGTaGATGAATGACTGCAAACTC +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLKSPSE*MNDCKL
Trigger: GAGTTTGCAGTCATTCATTCACTCACTCGGTGACTT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGCTGAGCCTTGAAGGATaGGTAGAAAAGAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGLSLEG*VEKKGT
Trigger: AGTGCCTTTCTTTTCTACTCATCCTTCAAGGCTCAG...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACAGGGTGGTCAGTTTTATaGAGCCATCTGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: FDESRSLRQSWKETPHFTGWSVL*SHLREG
Trigger: GCCTTCTCTCAGATGGCTTCATAAAACTGACCACCC...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCAACCAGGTCCCCGTCTaGGGGAATGGGATTCGCAGC +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFNQVPV*GNGIRS
Trigger: GCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGCTTGCACTCGCAGGCTaGGTACAGATAATTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRLALAG*VQIIVC
Trigger: ACACACAATTATCTGTACGCAGCCTGCGAGTGCAAG...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAATAGGTGAGCGCATCTaGACTGTCGGTGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKIGERI*TVGAAP
Trigger: TGGGGCTGCACCGACAGTGCAGATGCGCTCACCTAT...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATCTGTTTAGAAATGAATaGAGGGCCCAGATGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYLFRNE*RAQMSG
Trigger: CCCGCTCATCTGGGCCCTGCATTCATTTCTAAACAG...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACACTGTTTAGAAATGAATaGAGGGCCCAGATGAGCGGG +
Preference number: 4 (lower is better)
Translates to: FDESRSLRQSWKETPHFTLFRNE*RAQMSG
Trigger: CCCGCTCATCTGGGCCCTGCATTCATTTCTAAACAG...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTAACAAGAAATCTCTCTaGATCCCAGATGAACTGTCT +
Preference number: 4 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSNKKSL*IPDELS
Trigger: AGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTT...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGAACAAGAAATCTCTCTaGATCCCAGATGAACTGTCT +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLNKKSL*IPDELS
Trigger: AGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTT...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTGCTTCAAGGTGTGTCTaGATAGCCAAGGCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSASRCV*IAKALD
Trigger: GTCTAAGGCCTTGGCTATGCAGACACACCTTGAAGC...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTACCTTTCCACCGATATTaGTTTAAGAAGGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVPFHRY*FKKASP
Trigger: TGGTGAAGCCTTCTTAAAGCAATATCGGTGGAAAGG...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTCCTGATTTTCCACTATaGCCTTCACATGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSPDFPL*PSHGCP
Trigger: GGGACAGCCATGTGAAGGGCATAGTGGAAAATCAGG...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAAAGGCCCTCCAGAATCTaGCCCCACCTGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKRPSRI*PHLLLQ
Trigger: CTGAAGAAGCAGGTGGGGGCAGATTCTGGAGGGCCT...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACTTCTGGATTCTAGTGTaGCCTTACTGCCCCTCACTT +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANFWILV*PYCPSL
Trigger: AAGTGAGGGGCAGTAAGGGCACACTAGAATCCAGAA...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCTTCCCACCCTTGGCCTaGTTGAAACCCCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFFPPLA*LKPPRL
Trigger: CAGGCGTGGGGGTTTCAAGCAGGCCAAGGGTGGGAA...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTAAGAGCAGGTGTTACTaGAAACAGGAGACTGGCACT +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVKSRCY*KQETGT
Trigger: AGTGCCAGTCTCCTGTTTGCAGTAACACCTGCTCTT...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCACATGCAGAGGAGCTaGTCAGCAGTAATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVHMQRS*SAVILV
Trigger: AACCAGAATTACTGCTGAGCAGCTCCTCTGCATGTG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TTCAAATGTTCCAATAGCTGTGGTCACTGCACTTTGTCCTCCAAGGTCTCCCAAGTCATAAGACGCCATTaGACCCACATGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FKCSNSCGHCTLSSKVSQVIRRH*THMQRS
Trigger: GCTCCTCTGCATGTGGGTGCAATGGCGTCTTATGAC...TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCGCAGTCGTCCACGCATaGGGACAGGAAGGTGCGCAT +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFAVVHA*GQEGAH
Trigger: ATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGC...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTCACTGGGAATGGGGCTaGGACAGGGCCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIHWEWG*DRAWAG
Trigger: CCCAGCCCAGGCCCTGTCCCAGCCCCATTCCCAGTG...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643932.2
CDS-3UTR CCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCAGCAAACACTGGGAATaGGGCTGGGACAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFSKHWE*GWDRAW
Trigger: CCAGGCCCTGTCCCAGCCCCATTCCCAGTGTTTGCT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGGAGTTGCTGAGCCTCTaGGAAAATCTGGAAATTTGG +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGREELLSL*ENLEIW
Trigger: CCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTC...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGAACCAATCAATCACTaGAGACACACAGACTCCACC +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGEPINH*RHTDST
Trigger: GGTGGAGTCTGTGTGTCTCCAGTGATTGATTGGTTC...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCACAAATGATCTTTTCTaGCACTCAGGAAAAATGGGG +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVTNDLF*HSGKMG
Trigger: CCCCATTTTTCCTGAGTGCCAGAAAAGATCATTTGT...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCCAAGGATCCCAACGTaGATAAGACTGTCGCATTGT +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVPRIPT*IRLSHC
Trigger: ACAATGCGACAGTCTTATCCACGTTGGGATCCTTGG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCACTGTAACCTGGAGGTaGTCCTGTTTGTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFTVTWR*SCLCSA
Trigger: GGCAGAACACAAACAGGACCACCTCCAGGTTACAGT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTACAAAGGTGCGGAGCTaGGAAAAGAGATGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPTKVRS*EKRWFL
Trigger: AAGAAACCATCTCTTTTCCCAGCTCCGCACCTTTGT...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTAGCAGTGCTGGGCTCTaGAGAATGGGCAGAACACCC +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTSSAGL*RMGRTP
Trigger: GGGTGTTCTGCCCATTCTCCAGAGCCCAGCACTGCT...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTGAGATGGAGCAGTGCTaGGCTCTGGAGAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTEMEQC*ALENGQ
Trigger: CTGCCCATTCTCCAGAGCCCAGCACTGCTCCATCTC...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATAGTTCAACTCAAATaGCAATCACTGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSIVQLK*QSLTPP
Trigger: AGGAGGTGTCAGTGATTGCCATTTGAGTTGAACTAT...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTTTTGAGGCAAGACCTTaGGTTCAGCGTTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCFEARP*VQRSSF
Trigger: AAACGAAGAACGCTGAACCCAAGGTCTTGCCTCAAA...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTTCAGCAGGGCCCTCCTaGGGCAGGCCGAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIISAGPS*GRPRNL
Trigger: CAGGTTCCTCGGCCTGCCCCAGGAGGGCCCTGCTGA...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCTCCTTACGGCAATCCTaGAAGGAGACACCCCATTTC +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFSLRQS*KETPHF
Trigger: GAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGA...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp TCTTTCAAATGTTCCAATAGCTGTGGTCACTGCACTTaGTCCTCCAAGGTCTCCCAAAGTCCATCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SFKCSNSCGHCT*SSKVSQSPSSA
Trigger: GGCAGAGGATGGACTTTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp ACAGCATGTTCCCTATGGAAGGTTTGCGGGACTGAATaGTCACTCAGAAGCTTTCAGAACATCACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TACSLWKVCGTE*SLRSFQNITLW
Trigger: CCACAGGGTGATGTTCTGAAAGCTTCTGAGTGACAATTCAGTCCCGCAAACCTTCCATAGGGAACATGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp CTGCCGCACCCCCATGTCTTCGCACCCTTGTATGTATaGTGCTGTTCTCTGATAATAGCTGGGACTAGTTTT +
Preference number: 4 (lower is better)
Translates to: LPHPHVFAPLYV*CCSLIIAGTSF
Trigger: AAAACTAGTCCCAGCTATTATCAGAGAACAGCACAATACATACAAGGGTGCGAAGACATGGGGGTGCGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp TTATCTGTACTGCCGCACCCCCATGTCTTCGCACCCTaGTATGTATTGTGCTGTTCTCTGATAATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSVLPHPHVFAP*YVLCCSLIIAG
Trigger: CCCAGCTATTATCAGAGAACAGCACAATACATACAAGGGTGCGAAGACATGGGGGTGCGGCAGTACAGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCAGGGCTGGCGGCAGCTaGAACCCAGACTTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFRAGGS*NPDLSL
Trigger: TAGACTCAAGTCTGGGTTTCAGCTGCCGCCAGCCCT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTGCTCCTCCTGCTCGTTaGTGCATAGCTGGTAACCAC +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTAPPAR*CIAGNH
Trigger: GTGGTTACCAGCTATGCATCAACGAGCAGGAGGAGC...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTATCACAGAACCATTCTaGACCAATCAATCACTGGAG +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPITEPF*TNQSLE
Trigger: CTCCAGTGATTGATTGGTTCAGAATGGTTCTGTGAT...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCGAAAGTCTGTCTCACTaGTTTAAATCATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVESLSH*FKSSQH
Trigger: ATGCTGAGATGATTTAAATCAGTGAGACAGACTTTC...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCCTCCTTCCACTGTGCTaGGTGCTGGGCCAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFLLPLC*VLGQVQ
Trigger: TTGCACTTGGCCCAGCACTCAGCACAGTGGAAGGAG...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCGCCCCTATATGTTCCTaGAACTGTCCTTTAAGAATC +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPAPICS*NCPLRI
Trigger: GATTCTTAAAGGACAGTTTCAGGAACATATAGGGGC...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTTTAAAGGTCAGTTACTaGCCAAGATTACCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPLKVSY*PRLPKC
Trigger: GCACTTGGGTAATCTTGGTCAGTAACTGACCTTTAA...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTGCATCCTTTCCCATTaGACTTTGAGATCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVCILSH*TLRSLS
Trigger: AGAGAGCGATCTCAAAGTGCAATGGGAAAGGATGCA...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGACACCATCTCTCTCATaGATCCTTTCCCATTGCACT +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGTPSLS*ILSHCT
Trigger: AGTGCAATGGGAAAGGATGCATGAGAGAGATGGTGT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTACAGATTTCTCCAACTaGTCCCATGACTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCTDFSN*SHDCKG
Trigger: ACCTTTACAGTCATGGGAGCAGTTGGAGAAATCTGT...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCACAGATTTCTCCAACTaGTCCCATGACTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPTDFSN*SHDCKG
Trigger: ACCTTTACAGTCATGGGAGCAGTTGGAGAAATCTGT...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCAATATGTCAGTTAGCTTaGAAAGTAACCCTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPICQLA*KVTLGL
Trigger: TAGACCCAGGGTTACTTTGCAAGCTAACTGACATAT...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAATCCACTGTCCAGCACTaGCAACAGCCTCATGGCGAA +
Preference number: 4 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKSTVQH*QQPHGE
Trigger: TTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGA...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGGGGCTCAATAGGAATTaGGGAATAGGCATTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGGLNRN*GIGIRN
Trigger: GTTTCTAATGCCTATTCCCCAATTCCTATTGAGCCC...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTCATGCGCACATGCACTaGCCCAGGCACACTGAACTA +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTHAHMH*PRHTEL
Trigger: TAGTTCAGTGTGCCTGGGCCAGTGCATGTGCGCATG...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCACAGCATGTTCCCTATaGAAGGTTTGCGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFTACSL*KVCGTE
Trigger: TTCAGTCCCGCAAACCTTCCATAGGGAACATGCTGT...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCCCACCTACATTTCAGTaGCCAACACAATGGCAACAG +
Preference number: 4 (lower is better)
Translates to: GHRVISLGPQANGFVCWFPPTFQ*PTQWQQ
Trigger: CTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGG...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGCAACTCGACAAATCGTaGATACAACGAAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWQLDKS*IQRNRR
Trigger: CCTCCTGTTTCGTTGTATCCACGATTTGTCGAGTTG...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGTTTGAGGCAAGACCTTaGGTTCAGCGTTCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWFEARP*VQRSSF
Trigger: AAACGAAGAACGCTGAACCCAAGGTCTTGCCTCAAA...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGTATCAGACCTCAGGTTaGAAGTTGCTAGAAACATAT +
Preference number: 4 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRYQTSG*KLLETY
Trigger: ATATGTTTCTAGCAACTTCCAACCTGAGGTCTGATA...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTCCCTGCAGATGTACCTaGCCCTGGCGCTGGGATCAA +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESPCRCT*PWRWDQ
Trigger: TTGATCCCAGCGCCAGGGTCAGGTACATCTGCAGGG...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACACACAGTTCAGTCCTGTaGCCAGTAACTCTATTGAGA +
Preference number: 4 (lower is better)
Translates to: FDESRSLRQSWKETPHFTHSSVL*PVTLLR
Trigger: TCTCAATAGAGTTACTGGTCACAGGACTGAACTGTG...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTAACCCACCATGTTACTaGTGTAGCTCTTCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVNPPCY*CSSSER
Trigger: TCTTTCTGAAGAGCTACATCAGTAACATGGTGGGTT...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACATGCAGTTGCAGAGTTTaGACTTTAAATTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FDESRSLRQSWKETPHFTCSCRV*TLNWAG
Trigger: CCCTGCCCAATTTAAAGTTCAAACTCTGCAACTGCA...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACTGCAGTTTTAACAGATaGAGCAACTCATGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANCSFNR*SNSCLV
Trigger: GACAAGGCATGAGTTGCTGCATCTGTTAAAACTGCA...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGAGTGATAAAGAAAAATaGAGTCAGGTGGTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGSDKEK*SQVVSH
Trigger: GTGGGAAACCACCTGACTGCATTTTTCTTTATCACT...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGATATGTCAGTTAGCTTaGAAAGTAACCCTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: KALDNFTGLHIWPRSGREICQLA*KVTLGL
Trigger: TAGACCCAGGGTTACTTTGCAAGCTAACTGACATAT...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTGTGTCCTCAGGAACATaGAAGTGGAAGAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTVSSGT*KWKSSV
Trigger: CACCGAGCTCTTCCACTTCCATGTTCCTGAGGACAC...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTGCTAAAACTGGCCTGTaGGGACATCTCCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTAKTGL*GHLPQC
Trigger: GCATTGAGGGAGATGTCCCCACAGGCCAGTTTTAGC...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTCAACTCGACAAATCGTaGATACAACGAAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSQLDKS*IQRNRR
Trigger: CCTCCTGTTTCGTTGTATCCACGATTTGTCGAGTTG...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGTTGGCAGAACAACACTaGATGTCAATAAATAGTTCA +
Preference number: 4 (lower is better)
Translates to: PGTSASFCVGCGHHKESLLAEQH*MSINSS
Trigger: TGAACTATTTATTGACATCCAGTGTTGTTCTGCCAA...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp AAGACCCAACCTCCACTTATCTATCTAATCATATCATaGGCTGCTTACCTCCACCACCCCACTCCACACACA +
Preference number: 4 (lower is better)
Translates to: KTQPPLIYLIIS*AAYLHHPTPHT
Trigger: TGTGTGTGGAGTGGGGTGGTGGAGGTAAGCAGCCAATGATATGATTAGATAGATAAGTGGAGGTTGGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp CCTACAAAGCAATATGGAGGCCAGAAAGTAAGTTGCTaGGCTTTCATGACCACAGTTCAGTCCTGTGACCAG +
Preference number: 4 (lower is better)
Translates to: PTKQYGGQKVSC*AFMTTVQSCDQ
Trigger: CTGGTCACAGGACTGAACTGTGGTCATGAAAGCCAAGCAACTTACTTTCTGGCCTCCATATTGCTTTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTACACACCAGCTGTGCTaGAACCCTGTAAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTTHQLC*NPVSEA
Trigger: AGCTTCACTTACAGGGTTTCAGCACAGCTGGTGTGT...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCACTGTGTACAGGGTGTaGCAAAAGCCTCCGGCAGTA +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFTVYRV*QKPPAV
Trigger: TACTGCCGGAGGCTTTTGTCACACCCTGTACACAGT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR TCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCGAGGTTGCAGTGAGCTaGGATCGCACCATTGCATTC +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFEVAVS*DRTIAF
Trigger: GAATGCAATGGTGCGATCTCAGCTCACTGCAACCTC...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGTTCCTTAAGGAGAGATaGCCAGAAATCAAGCTTACA +
Preference number: 4 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRFLKER*PEIKLT
Trigger: TGTAAGCTTGATTTCTGGTCATCTCTCCTTAAGGAA...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTGCCCCTATATGTTCCTaGAACTGTCCTTTAAGAATC +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSAPICS*NCPLRI
Trigger: GATTCTTAAAGGACAGTTTCAGGAACATATAGGGGC...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTGGCTGTGTGCAGATATaGCAAATGTCTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTGCVQI*QMSPVA
Trigger: AGCCACAGGAGACATTTGTCATATCTGCACACAGCC...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGCTTCTGCTGCTTTATTaGAGGATGATTTTTAGTCTC +
Preference number: 4 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALLLLLY*RMIFSL
Trigger: GAGACTAAAAATCATCCTTCAATAAAGCAGCAGAAG...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCCCTTGTATGTATTGTaGTGTTCTCTGATAATAGCT +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPPLYVL*CSLIIA
Trigger: AGCTATTATCAGAGAACAGCACAATACATACAAGGG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATAGGCCCAACACCAAATaGAGAAGTAACAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYRPNTK*RSNSFA
Trigger: TGCAAAACTGTTACTTCTGCATTTGGTGTTGGGCCT...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCAAAGAGATGGAGCAGTaGTGGGCTCTGGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFKEMEQ*WALENG
Trigger: CCCATTCTCCAGAGCCCAGCACTGCTCCATCTCTTT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTAGTAGAGAAGACAGGTaGACCACAGCGCACAATGAC +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTSREDR*TTAHND
Trigger: GTCATTGTGCGCTGTGGTGCACCTGTCTTCTCTACT...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTACATCATAGGAAACTTTaGAACTTCTGCTGCTTTATT +
Preference number: 4 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVHHRKL*NFCCFI
Trigger: AATAAAGCAGCAGAAGTTGCAAAGTTTCCTATGATG...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTAGTCACACTTTGGTCTaGGCAGTGGTCCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTSHTLV*AVVPKS
Trigger: ACTTTTGGGGACCACTGCCCAGACCAAAGTGTGACT...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCAGAAGGAATCCCAAATaGACAAATGATCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLRRNPK*TNDLFW
Trigger: CCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTGCTTCTACTCAGAAGTaGCTGTGTTGCCTCCACCTA +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTASTQK*LCCLHL
Trigger: TAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGC...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCTATCAGACCTCAGGTTaGAAGTTGCTAGAAACATAT +
Preference number: 4 (lower is better)
Translates to: SLRPELLSLWENLEIWFPYQTSG*KLLETY
Trigger: ATATGTTTCTAGCAACTTCCAACCTGAGGTCTGATA...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp AAGCTTCTACTCAGAAGTGGCTGTGTTGCCTCCACCTACATTTCAGTGGCCAACGAAAGTCTGTCTCACTaGTTTAAATCATCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KLLLRSGCVASTYISVANESLSH*FKSSQH
Trigger: ATGCTGAGATGATTTAAATCAGTGAGACAGACTTTC...GTTGGCCACTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGAGTAGAAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTCTCAGAACTCAGCTATaGCCCTCATGGAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTLRTQL*PSWKEK
Trigger: CTTCTCTTTCCATGAGGGTCATAGCTGAGTTCTGAG...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCCTCACACCTCCTCACTaGTTCTCACTACTCACTTGG +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFLTPPH*FSLLTW
Trigger: CCAAGTGAGTAGTGAGAAGCAGTGAGGAGGTGTGAG...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTCCACACACAAAAGCATaGGCACATGCACTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESPHTKA*AHALAQ
Trigger: CTGGGCCAGTGCATGTGCGCATGCTTTTGTGTGTGG...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTCATATCGACTCCGAATaGCCAGGACCACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESHIDSE*PGPQVA
Trigger: TGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATG...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCAGTCACACTTTGGTCTaGGCAGTGGTCCCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFSHTLV*AVVPKS
Trigger: ACTTTTGGGGACCACTGCCCAGACCAAAGTGTGACT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTACAAATGATCTTTTCTaGCACTCAGGAAAAATGGGG +
Preference number: 4 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSTNDLF*HSGKMG
Trigger: CCCCATTTTTCCTGAGTGCCAGAAAAGATCATTTGT...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAATTCTCACTACTCACTTaGCCACACCATTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKFSLLT*PHHSLL
Trigger: GAGCAGAGAATGGTGTGGCCAAGTGAGTAGTGAGAA...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGACTATGGCCATAATTTaGTCACATGAAACCGTAATG +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGTMAII*SHETVM
Trigger: CATTACGGTTTCATGTGACCAAATTATGGCCATAGT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGATGAGGCTTCACACTTaGGGAATTCTTTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGMRLHT*GILYFL
Trigger: CAAAAAGTAAAGAATTCCCCAAGTGTGAAGCCTCAT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGTTGGCAGAACAACACTaGATGTCAATAAATAGTTCA +
Preference number: 4 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALLAEQH*MSINSS
Trigger: TGAACTATTTATTGACATCCAGTGTTGTTCTGCCAA...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp CACTTTGAGATCGCTCTCTTTACATCCTACAGCACTTaGTCAGGATCTTCCACTTCACACTTGTCCCATCTA +
Preference number: 4 (lower is better)
Translates to: HFEIALFTSYST*SGSSTSHLSHL
Trigger: TAGATGGGACAAGTGTGAAGTGGAAGATCCTGACAAAGTGCTGTAGGATGTAAAGAGAGCGATCTCAAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCTGGCTTTCTTTATCCTaGCCATCTATCCTTCACGGG +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFWLSLS*PSILHG
Trigger: CCCGTGAAGGATAGATGGTCAGGATAAAGAAAGCCA...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTTTTGGAACAGGTCACTaGTGCATCCCCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESFGTGH*CIPQAQ
Trigger: TTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAA...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCAGCAAATACAGCACCTaGTTGACCACGGGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFSKYST*LTTGCK
Trigger: TTTACAGCCCGTGGTCAAGCAGGTGCTGTATTTGCT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCACACCCCTCAGATACTaGAAATCGGGCTCAATAGGA +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFTPLRY*KSGSIG
Trigger: TCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR GCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTGGCCACACCATTCTCTaGTCAGTGCCCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIGHTIL*SVPHGR
Trigger: TCTTCCATGGGGCACTGAGCAGAGAATGGTGTGGCC...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCGCTTTGCCAACTCACTaGTACAGTCCATCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFALPTH*YSPSLS
Trigger: AGACAAGGATGGACTGTAGCAGTGAGTTGGCAAAGC...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCCACATGCAGAGGAGCTaGTCAGCAGTAATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFHMQRS*SAVILV
Trigger: AACCAGAATTACTGCTGAGCAGCTCCTCTGCATGTG...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCGAACCAATCAATCACTaGAGACACACAGACTCCACC +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFEPINH*RHTDST
Trigger: GGTGGAGTCTGTGTGTCTCCAGTGATTGATTGGTTC...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTGTAACCTCGAACTCCTaGGCTCAAGTACTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESVTSNS*AQVLLP
Trigger: TGGGAGGAGTACTTGAGCCCAGGAGTTCGAGGTTAC...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp AGATTTGCAGTTTTAACAGATGCAGCAACTCATGCCTaGTCTGTCAAAACCCAGAGCAGAAACAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RFAVLTDAATHA*SVKTQSRNSFK
Trigger: CTTGAAGCTGTTTCTGCTCTGGGTTTTGACAGACAAGGCATGAGTTGCTGCATCTGTTAAAACTGCAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp GAAATCAAGCTTACACATCCTATGGGGCTGAAATATTaGATCTTCATGGCCCAAGGAACACTAGGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: EIKLTHPMGLKY*IFMAQGTLGEH
Trigger: ATGCTCACCTAGTGTTCCTTGGGCCATGAAGATCAAATATTTCAGCCCCATAGGATGTGTAAGCTTGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
3UTR CAA 72 bp GATTTACCAGACAATGAGACTGATATGTCAGTTAGCTaGCAAAGTAACCCTGGGTCTATCAGACCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: DLPDNETDMSVS*QSNPGSIRPQV
Trigger: AACCTGAGGTCTGATAGACCCAGGGTTACTTTGCAAGCTAACTGACATATCAGTCTCATTGTCTGGTAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTAATACAGCACCTGCTTaGCCACGGGCTGTAAACGAG +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIINTAPA*PRAVNE
Trigger: CTCGTTTACAGCCCGTGGTCAAGCAGGTGCTGTATT...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTCTGAGATCGCACCATTaGATTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIILRSHH*IPAWAT
Trigger: TGTTGCCCAGGCTGGAATGCAATGGTGCGATCTCAG...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTCCTTTCCACCGATATTaGTTTAAGAAGGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTPFHRY*FKKASP
Trigger: TGGTGAAGCCTTCTTAAAGCAATATCGGTGGAAAGG...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCACACCATCTCTCTCATaGATCCTTTCCCATTGCACT +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFTPSLS*ILSHCT
Trigger: AGTGCAATGGGAAAGGATGCATGAGAGAGATGGTGT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTGGAAAGGGTGAGCCCTaGAACTCGACAAATCGTGGA +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIGKGEP*NSTNRG
Trigger: TCCACGATTTGTCGAGTTGCAGGGCTCACCCTTTCC...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTCCAAGATTACCCAAGTaGCCCTATATGTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTPRLPK*PYMFLK
Trigger: TTTCAGGAACATATAGGGGCACTTGGGTAATCTTGG...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TTCAAATGTTCCAATAGCTGTGGTCACTGCACTTTGTCCTCCAAGGTCTCCCAAATCTGTAAAAACAGATaGCTGATTAAATCCCTGACC +
Preference number: 4 (lower is better)
Translates to: FKCSNSCGHCTLSSKVSQICKNR*LIKSLT
Trigger: GGTCAGGGATTTAATCAGGCATCTGTTTTTACAGAT...TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTAGGGCTTTGTCTCCCTaGGAAGGAATCCATGTCTTG +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESRALSP*EGIHVL
Trigger: CAAGACATGGATTCCTTCCCAGGGAGACAAAGCCCT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTGCACCTCCCCTTCTGTaGCCACGTCATCAACTACTT +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIAPPLL*PRHQLL
Trigger: AAGTAGTTGATGACGTGGCCACAGAAGGGGAGGTGC...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTCTCCCTTTGCAAAGCTaGTCACAACTGACCGCACCT +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIILPLQS*SQLTAP
Trigger: AGGTGCGGTCAGTTGTGACCAGCTTTGCAAAGGGAG...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCAGCTGGGAAAAGAGATaGTTTCTTCAGGAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFSWEKR*FLQERV
Trigger: CACCCTTTCCTGAAGAAACCATCTCTTTTCCCAGCT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTAAAAATGCAGTCAGGTaGTTTCCCACCCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESKNAVR*FPTLGL
Trigger: CAGGCCAAGGGTGGGAAACCACCTGACTGCATTTTT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTAAGTATGGACACTGGTaGTCAGTGAGAATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESKYGHW*SVRMLS
Trigger: GGAGAGCATTCTCACTGATCACCAGTGTCCATACTT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTGGGAAGGGCCACACTTaGGCCAAAGAAGATGTAGAA +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIGKGHT*AKEDVE
Trigger: TTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCC...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTATAGTTCAACTCAAATaGCAATCACTGACACCTCCT +
Preference number: 4 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTIVQLK*QSLTPP
Trigger: AGGAGGTGTCAGTGATTGCCATTTGAGTTGAACTAT...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTAGAGTTTTGTGTCCTTaGGAAAGACTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESRVLCP*ERLHVL
Trigger: GAGGACATGGAGTCTTTCTCAAGGACACAAAACTCT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTTGCAGTTGCAGAGTTTaGACTTTAAATTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESCSCRV*TLNWAG
Trigger: CCCTGCCCAATTTAAAGTTCAAACTCTGCAACTGCA...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTGAGTTGCTGAGCCTCTaGGAAAATCTGGAAATTTGG +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESELLSL*ENLEIW
Trigger: CCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTC...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTAGAGAAGTTTGCATGTaGTTTGGAAGGCAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESREVCM*FGRQKW
Trigger: CCACTTTTGCCTTCCAAATCACATGCAAACTTCTCT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCATCTGTAAAAACAGATaGCTGATTAAATCCCTGACC +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFICKNR*LIKSLT
Trigger: GGTCAGGGATTTAATCAGGCATCTGTTTTTACAGAT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTTCAACCCAAGAGCTATaGGAGGTTTGGCTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESSTQEL*EVWLSL
Trigger: TAAAGAAAGCCAAACCTCCCATAGCTCTTGGGTTGA...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTTTAAAGGTCAGTTACTaGCCAAGATTACCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIILKVSY*PRLPKC
Trigger: GCACTTGGGTAATCTTGGTCAGTAACTGACCTTTAA...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR TCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTTGTTATTCTTTATTGTaGAAGGACAGGAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIICYSLL*KDRKGR
Trigger: CCTCCCCTTCCTGTCCTTTCACAATAAAGAATAACA...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCCATCATAGGAAACTTTaGAACTTCTGCTGCTTTATT +
Preference number: 4 (lower is better)
Translates to: HSCDISCTPETCTCYSNFHHRKL*NFCCFI
Trigger: AATAAAGCAGCAGAAGTTGCAAAGTTTCCTATGATG...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR GCA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTCCCTTGTATGTATTGTaGTGTTCTCTGATAATAGCT +
Preference number: 4 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESPLYVL*CSLIIA
Trigger: AGCTATTATCAGAGAACAGCACAATACATACAAGGG...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CCA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTACTATGGCCATAATTTaGTCACATGAAACCGTAATG +
Preference number: 4 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIITMAII*SHETVM
Trigger: CATTACGGTTTCATGTGACCAAATTATGGCCATAGT...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS GCA 90 bp GGGCCGGGGACCTGGGTAGGAGTTCAGGCCTGGGCGACTCCGGGCTaGGCTGAACCGGCGATAACCAGGCCCCGCGGCGGCGGCCTCGAC +
Preference number: 5 (lower is better)
Translates to: GPGTWVGVQAWATPG*AEPAITRPRGGGLD
Trigger: GTCGAGGCCGCCGCCGCGGGGCCTGGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTACCCAGGTCCCCGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439587.6
ENST00000643932.2
CDS GCA 90 bp TCCCGCCCTGCGCAGGCCGGGGCGCCGAGGTCGGGACAGGGTCAGTaGAGCGGCTGCCGCCTTCTTTCCACTGCCTGCAGCCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: SRPAQAGAPRSGQGQ*SGCRLLSTACSPAG
Trigger: GCCAGCTGGGCTGCAGGCAGTGGAAAGAAGGCGGCAGCCGCTGCACTGACCCTGTCCCGACCTCGGCGCCCCGGCCTGCGCAGGGCGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS TCA 90 bp GGGGACCTGGGTAGGAGTTCAGGCCTGGGCGACTCCGGGCTGCGCTaGACCGGCGATAACCAGGCCCCGCGGCGGCGGCCTCGACTTGAC +
Preference number: 5 (lower is better)
Translates to: GDLGRSSGLGDSGLR*TGDNQAPRRRPRLD
Trigger: GTCAAGTCGAGGCCGCCGCCGCGGGGCCTGGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTACCCAGGTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439587.6
ENST00000643932.2
CDS GCA 90 bp ACTGGCCGTAGGGCCCGCAGTCGTCCACGCATGGGGACAGGAAGGTaGGCATCCGCACCTCGGCCGTCGCGTTGCGGCACCGCACGAACC +
Preference number: 5 (lower is better)
Translates to: TGRRARSRPRMGTGR*ASAPRPSRCGTART
Trigger: GGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS CCA 90 bp CAGCTCGTTGCGCAGAGTCGGGCGCACTGGCCAGCAGTGCTCGGGTaGGGACGTGGTCCCAGGCCCCTCCGCAGGGGTTCCAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: QLVAQSRAHWPAVLG*GRGPRPLRRGSKGW
Trigger: CCATCCCTTGGAACCCCTGCGGAGGGGCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000490199.2
ENST00000643932.2
ENST00000650015.1
CDS CCA 90 bp GCGCAGCAGCTTGCACTGGCCGTAGGGCCCGCAGTCGTCCACGCATaGGGACAGGAAGGTGCGCATCCGCACCTCGGCCGTCGCGTTGCG +
Preference number: 5 (lower is better)
Translates to: AQQLALAVGPAVVHA*GQEGAHPHLGRRVA
Trigger: CGCAACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS TCA 90 bp TGTGTGGTGAGGTCGAACTGGTGGCTCCGGAGAACGAGCTGGTGCTaGTTCCCGCCCTGCGCAGGCCGGGGCGCCGAGGTCGGGACAGGG +
Preference number: 5 (lower is better)
Translates to: CVVRSNWWLRRTSWC*FPPCAGRGAEVGTG
Trigger: CCCTGTCCCGACCTCGGCGCCCCGGCCTGCGCAGGGCGGGAATCAGCACCAGCTCGTTCTCCGGAGCCACCAGTTCGACCTCACCACACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS TCA 90 bp TCTAGGCTGGGTAGGAGTTCAGGCCTGGGCGACTCCGGGCTGCGCTaGACCGGCGATAACCAGGCCCCGCGGCGGCGGCCTCGACTTGAC +
Preference number: 5 (lower is better)
Translates to: SRLGRSSGLGDSGLR*TGDNQAPRRRPRLD
Trigger: GTCAAGTCGAGGCCGCCGCCGCGGGGCCTGGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTACCCAGCCTAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000650015.1
CDS GCA 90 bp TCCCGAAGGCGCGCAGAGCCGCGCAGAGCTCCTGCCTGTGGCCTCTaGCCCTCCGAGGCACAAGCTCCGGGGCTGTGTGGTGAGGTCGAA +
Preference number: 5 (lower is better)
Translates to: SRRRAEPRRAPACGL*PSEAQAPGLCGEVE
Trigger: TTCGACCTCACCACACAGCCCCGGAGCTTGTGCCTCGGAGGGGCAGAGGCCACAGGCAGGAGCTCTGCGCGGCTCTGCGCGCCTTCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS GCA 90 bp TTGAGTCTAGGCTGGGTAGGAGTTCAGGCCTGGGCGACTCCGGGCTaGGCTGAACCGGCGATAACCAGGCCCCGCGGCGGCGGCCTCGAC +
Preference number: 5 (lower is better)
Translates to: LSLGWVGVQAWATPG*AEPAITRPRGGGLD
Trigger: GTCGAGGCCGCCGCCGCGGGGCCTGGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTACCCAGCCTAGACTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000650015.1
CDS CCA 90 bp GTGGACAGAGAAGGTGTCCAGCTCGTTGCGCAGAGTCGGGCGCACTaGCCAGCAGTGCTCGGGTGGGGACGTGGTCCCAGGCCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: VDREGVQLVAQSRAH*PAVLGWGRGPRPLR
Trigger: GCGGAGGGGCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCTCTGTCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000490199.2
ENST00000643932.2
ENST00000650015.1
CDS GCA 90 bp AAGAGCCCGCCTCCAAAGTGGCTGCAGAGGCAATGGGGTGAATCGTaGTCAGAGGCGCGCTCCAATGGGGTAGCAGGGCTCGCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: KSPPPKWLQRQWGES*SEARSNGVAGLARP
Trigger: CGGCCGGGCGAGCCCTGCTACCCCATTGGAGCGCGCCTCTGAGCACGATTCACCCCATTGCCTCTGCAGCCACTTTGGAGGCGGGCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS CCA 90 bp GCACAGGGAGCGGAGGGCCAGGAACCAGGTCCCCGTCTGCGGGAATaGGATTCGCAGCCTGGCAACCCTGGTGGTGGCACTGACAGAGAG +
Preference number: 5 (lower is better)
Translates to: AQGAEGQEPGPRLRE*DSQPGNPGGGTDRE
Trigger: CTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCCTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000473947.1
ENST00000643932.2
ENST00000650015.1
CDS CCA 90 bp AAGGCTGCCAGGGCACAAGTAGAAAAGCCAGCGGCGCCACGTGGGTaGGTAGCAGTGCCGGCGGCGGACGCTGCGTACTGTCCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: KAARAQVEKPAAPRG*VAVPAADAAYCPGC
Trigger: ACAGCCTGGACAGTACGCAGCGTCCGCCGCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGCTTTTCTACTTGTGCCCTGGCAGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS TCA 90 bp CTGTGGCCTCTGCCCCTCCGAGGCACAAGCTCCGGGGCTGTGTGGTaGGGTCGAACTGGTGGCTCCGGAGAACGAGCTGGTGCTGATTCC +
Preference number: 5 (lower is better)
Translates to: LWPLPLRGTSSGAVW*GRTGGSGERAGADS
Trigger: GGAATCAGCACCAGCTCGTTCTCCGGAGCCACCAGTTCGACCTCACCACACAGCCCCGGAGCTTGTGCCTCGGAGGGGCAGAGGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS CCA 90 bp GTTGCCTCCTCCAGATCATGGCCTCTGACCCACTGGGTGACCTGCTaGCCTTTAGCCATGCCCCGCCCCAGCCACCCTTGTGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: VASSRSWPLTHWVTC*PLAMPRPSHPCAAA
Trigger: GGCAGCAGCACAAGGGTGGCTGGGGCGGGGCATGGCTAAAGGCCAGCAGGTCACCCAGTGGGTCAGAGGCCATGATCTGGAGGAGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464519.6
ENST00000473947.1
CDS TCA 90 bp TTTAGCCATGCCCCGCCCCAGCCACCCTTGTGCTGCTGCCCACCCTaGCACAAGGCTGGTGTGCCAGAGAGCCTGGGTAGGAGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: FSHAPPQPPLCCCPP*HKAGVPESLGRSSG
Trigger: GCCTGAACTCCTACCCAGGCTCTCTGGCACACCAGCCTTGTGTCAGGGTGGGCAGCAGCACAAGGGTGGCTGGGGCGGGGCATGGCTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464519.6
CDS GCA 90 bp TCGGGACAGGGTCAGTGCAGCGGCTGCCGCCTTCTTTCCACTGCCTaGAGCCCAGCTGGCCCGATGCCCCCTGCAGGAAATGAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: SGQGQCSGCRLLSTA*SPAGPMPPAGNELS
Trigger: AGAAAGCTCATTTCCTGCAGGGGGCATCGGGCCAGCTGGGCTGCAGGCAGTGGAAAGAAGGCGGCAGCCGCTGCACTGACCCTGTCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS GCA 90 bp TCCACCCGGCCTTGCACTCGCAGGCTGCGTACAGATAATTGTGTGTaGGCAGCAGCTTGCACTGGCCGTAGGGCCCGCAGTCGTCCACGC +
Preference number: 5 (lower is better)
Translates to: STRPCTRRLRTDNCV*AAACTGRRARSRPR
Trigger: GCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS GCA 90 bp CGCACGGAGCTCTGGACCCAGCATGTCCTCCTGGGGCTGCCAAGTTaGCTCCTCCAGATCATGGCCTCTGACCCACTGGGTGACCTGCTG +
Preference number: 5 (lower is better)
Translates to: RTELWTQHVLLGLPS*LLQIMASDPLGDLL
Trigger: CAGCAGGTCACCCAGTGGGTCAGAGGCCATGATCTGGAGGAGGCAACTTGGCAGCCCCAGGAGGACATGCTGGGTCCAGAGCTCCGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473947.1
CDS CCA 90 bp ATTGAGCTGGAGCTCCAGGCTGAGGACGCCTCCACTGTCCAGCACTaGCAACAGCCTCATGGCGAACACGGCTGGGCGCTCAGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: IELELQAEDASTVQH*QQPHGEHGWALRGK
Trigger: CTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000490199.2
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCACCTCGGCCGTCGCGTaGCGGCACCGCACGAACCGA +
Preference number: 5 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPTSAVA*RHRTNR
Trigger: TCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGT...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGACCCCGTGGTCAGTCTaGGCACGAGGGGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEETPWSV*ARGGSR
Trigger: CCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGGT...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS TCA 90 bp TGCTCAGGCAGAGCAGGAGTGTGGACAGCAGCTGGAATCCATAGGTaGGCGCATCTGCACTGTCGGTGCAGCCCCAGCCTCTCCACCCGG +
Preference number: 5 (lower is better)
Translates to: CSGRAGVWTAAGIHR*AHLHCRCSPSLSTR
Trigger: CCGGGTGGAGAGGCTGGGGCTGCACCGACAGTGCAGATGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS GCA 90 bp CAAGTTGCCTCCTCCAGATCATGGCCTCTGACCCACTGGGTGACCTaGTGGCCTTTAGCCATGCCCCGCCCCAGCCACCCTTGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: QVASSRSWPLTHWVT*WPLAMPRPSHPCAA
Trigger: AGCAGCACAAGGGTGGCTGGGGCGGGGCATGGCTAAAGGCCAGCAGGTCACCCAGTGGGTCAGAGGCCATGATCTGGAGGAGGCAACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464519.6
ENST00000473947.1
CDS GCA 90 bp TTTCCTGGCGCACGGAGCTCTGGACCCAGCATGTCCTCCTGGGGCTaGCAAGTTGCCTCCTCCAGATCATGGCCTCTGACCCACTGGGTG +
Preference number: 5 (lower is better)
Translates to: FPGARSSGPSMSSWG*QVASSRSWPLTHWV
Trigger: CACCCAGTGGGTCAGAGGCCATGATCTGGAGGAGGCAACTTGGCAGCCCCAGGAGGACATGCTGGGTCCAGAGCTCCGTGCGCCAGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473947.1
CDS-3UTR CAA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTGCAGGGGTGGGGCTTaGGGACGCAGACGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEECRGGA*GRRRSD
Trigger: GTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGCA...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTATGCCTGAGGTGCGGTaGGGCAGTGTCCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: QKPPAVAPISPADSLRGPMPEVR*GSVQLR
Trigger: CCTCAGCTGGACACTGCCCAACCGCACCTCAGGCAT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS TCA 90 bp TTTAGCCATGCCCCGCCCCAGCCACCCTTGTGCTGCTGCCCACCCTaGCACAAGGCTGGTGTGCCAGAGAGCAGTCACACTTTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: FSHAPPQPPLCCCPP*HKAGVPESSHTLVW
Trigger: CCAGACCAAAGTGTGACTGCTCTCTGGCACACCAGCCTTGTGTCAGGGTGGGCAGCAGCACAAGGGTGGCTGGGGCGGGGCATGGCTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473947.1
CDS GCA 90 bp TGCACTCGCAGGCTGCGTACAGATAATTGTGTGTGCGCAGCAGCTTaGACTGGCCGTAGGGCCCGCAGTCGTCCACGCATGGGGACAGGA +
Preference number: 5 (lower is better)
Translates to: CTRRLRTDNCVCAAA*TGRRARSRPRMGTG
Trigger: TCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS GCA 90 bp GACACTCATCCTGGAGACCCTGGACCCAGCATGTCCTCCTGGGGCTaGCAAGTTGCCTCCTCCAGATCATGGCCTCTGACCCACTGGGTG +
Preference number: 5 (lower is better)
Translates to: DTHPGDPGPSMSSWG*QVASSRSWPLTHWV
Trigger: CACCCAGTGGGTCAGAGGCCATGATCTGGAGGAGGCAACTTGGCAGCCCCAGGAGGACATGCTGGGTCCAGGGTCTCCAGGATGAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464519.6
CDS CCA 90 bp CGGGCTGTGGGCACTCTTGCAACCGCACACACAGCTGGAAGCGGATaGTCCTACCAGGGCCCCGGGATGATGTTTCCACACGCACGTAGA +
Preference number: 5 (lower is better)
Translates to: RAVGTLATAHTAGSG*SYQGPGMMFPHARR
Trigger: TCTACGTGCGTGTGGAAACATCATCCCGGGGCCCTGGTAGGACCATCCGCTTCCAGCTGTGTGTGCGGTTGCAAGAGTGCCCACAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000464519.6
ENST00000643932.2
ENST00000650015.1
CDS CCA 90 bp GCCTCCACTGTCCAGCACTGGCAACAGCCTCATGGCGAACACGGCTaGGCGCTCAGGGGGAAGGGCCACACTTGGGCCAAAGAAGATGTA +
Preference number: 5 (lower is better)
Translates to: ASTVQHWQQPHGEHG*ALRGKGHTWAKEDV
Trigger: TACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000490199.2
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTACCTCGGCCGTCGCGTaGCGGCACCGCACGAACCGA +
Preference number: 5 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCTSAVA*RHRTNR
Trigger: TCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGT...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAATGCCTGAGGTGCGGTaGGGCAGTGTCCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAMPEVR*GSVQLR
Trigger: CCTCAGCTGGACACTGCCCAACCGCACCTCAGGCAT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACACCCCGTGGTCAGTCTaGGCACGAGGGGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHTPWSV*ARGGSR
Trigger: CCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGGT...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGACCCCGTGGTCAGTCTaGGCACGAGGGGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQTPWSV*ARGGSR
Trigger: CCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGGT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS GCA 90 bp GTGGGCACTTTGTACAGGGCTGAGCGATTGTGTGGGGAGAGGGTTTaGTCTGAGGGCCGGCCAGGAACCAGCACAGCGACGTCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: VGTLYRAERLCGERV*SEGRPGTSTATSSK
Trigger: TTTGCTGGACGTCGCTGTGCTGGTTCCTGGCCGGCCCTCAGAGCAAACCCTCTCCCCACACAATCGCTCAGCCCTGTACAAAGTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490199.2
CDS-3UTR CAA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGTGCAGGGGTGGGGCTTaGGGACGCAGACGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQCRGGA*GRRRSD
Trigger: GTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGCA...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCTGCAGGGGTGGGGCTTaGGGACGCAGACGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVCRGGA*GRRRSD
Trigger: GTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGCA...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTGGGGAAGGGCCACACTaGGGCCAAAGAAGATGTAGA +
Preference number: 5 (lower is better)
Translates to: QKPPAVAPISPADSLRGPGEGPH*GQRRCR
Trigger: TCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCC...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTACCTCGGCCGTCGCGTaGCGGCACCGCACGAACCGA +
Preference number: 5 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCTSAVA*RHRTNR
Trigger: TCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGT...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCACCTCTCCACCCGGCCTaGCACTCGCAGGCTGCGTAC +
Preference number: 5 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPPLHPA*HSQAAY
Trigger: GTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGG...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCATGCAGGAGGGACTCCTaGGTCCTGAGGGACTCTGTG +
Preference number: 5 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEACRRDS*VLRDSV
Trigger: CACAGAGTCCCTCAGGACCAAGGAGTCCCTCCTGCA...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTAGCCTGAGGCCAGAGTaGCTGAGCCTCTGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: QKPPAVAPISPADSLRGPSLRPE*LSLWEN
Trigger: ATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAATCACCCTGTGGGGATaGAGCCCTGTGCTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAITLWG*SPVLLN
Trigger: GTTCAGCAGCACAGGGCTCAATCCCCACAGGGTGAT...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AAGGCAGGAGGACGGGCCAGAGCCTGCACACACAAAAGCCCTCAAATGCCTCCGATCACCCTGTGGGGATaGAGCCCTGTGCTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: KAGGRARACTHKSPQMPPITLWG*SPVLLN
Trigger: GTTCAGCAGCACAGGGCTCAATCCCCACAGGGTGAT...CGGAGGCATTTGAGGGCTTTTGTGTGTGCAGGCTCTGGCCCGTCCTCCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTGAGGGCACCCCCATGTaGCTCATCTGCTGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSEGTPM*LICWLP
Trigger: GGGGAGCCAGCAGATGAGCAACATGGGGGTGCCCTC...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGACTAGGGAGGATCGCTaGAACTTGGGAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWTREDR*NLGGGG
Trigger: GCCTCCACCTCCCAAGTTCAAGCGATCCTCCCTAGT...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS TCA 90 bp TTGGAACAGGTCACTGCTGCATCCCCCAGGCTCAAGGGCACCTCGTaGGTCAAGCATCCAAACACCGTCACGTTTTCCTGGCGCACGGAG +
Preference number: 5 (lower is better)
Translates to: LEQVTAASPRLKGTS*VKHPNTVTFSWRTE
Trigger: CTCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000473947.1
ENST00000490199.2
ENST00000643932.2
ENST00000650015.1
CDS GCA 90 bp ACAAAGACCTTGTACAGGGCTGAGCGATTGTGTGGGGAGAGGGTTTaGTCTGAGGGCCGGCCAGGAACCAGCACAGCGACGTCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: TKTLYRAERLCGERV*SEGRPGTSTATSSK
Trigger: TTTGCTGGACGTCGCTGTGCTGGTTCCTGGCCGGCCCTCAGAGCAAACCCTCTCCCCACACAATCGCTCAGCCCTGTACAAGGTCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000464519.6
ENST00000643932.2
ENST00000650015.1
CDS CCA 90 bp CCAGGAATGTGTCCTCAGGAACATGGAAGTGGAAGAGCTCGGTGCTaGCAAAGGAGCGGAAAGGACTCAGCTTGCGGGGTGAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PGMCPQEHGSGRARC*QRSGKDSACGVSRW
Trigger: CCACCTGCTCACCCCGCAAGCTGAGTCCTTTCCGCTCCTTTGCCAGCACCGAGCTCTTCCACTTCCATGTTCCTGAGGACACATTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000439587.6
ENST00000473947.1
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCACAGGCCACAGAGCTaGAGTTGTGCAGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESHRPQS*SCAGVG
Trigger: CCCCACCCCTGCACAACTCAAGCTCTGTGGCCTGTG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGAAGGTGTCCAGCTCGTaGCGCAGAGTCGGGCGCACT +
Preference number: 5 (lower is better)
Translates to: PGTSASFCVGCGHHKESLKVSSS*RRVGRT
Trigger: AGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTT...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAAGGTGTCCAGCTCGTaGCGCAGAGTCGGGCGCACT +
Preference number: 5 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSKVSSS*RRVGRT
Trigger: AGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTT...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATCGCACGGAGCTCGCATaGAGCTGGAGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHRTELA*SWSSRL
Trigger: CAGCCTGGAGCTCCAGCTCAATGCGAGCTCCGTGCG...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGACCTCGGCCGTCGCGTaGCGGCACCGCACGAACCGA +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRTSAVA*RHRTNR
Trigger: TCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGT...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTATGCCTGAGGTGCGGTaGGGCAGTGTCCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCMPEVR*GSVQLR
Trigger: CCTCAGCTGGACACTGCCCAACCGCACCTCAGGCAT...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGGCCCTCAGGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGAGCCTGAGGCCAGAGTaGCTGAGCCTCTGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: RPSGSSPCPGKGSRSLEESLRPE*LSLWEN
Trigger: ATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT...CTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCCTGAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCACCTCTGCATTCCCCCTaGCTGTTCCCTCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEAPLHSP*LFPLHV
Trigger: GACATGGAGAGGGAACAGCAAGGGGGAATGCAGAGG...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCACCAAGGATTCCCATTTaGGGAGCCTGGAGACAGGCC +
Preference number: 5 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEAPRIPI*GAWRQA
Trigger: GGCCTGTCTCCAGGCTCCCAAAATGGGAATCCTTGG...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGCGCCCACCGCTCCCTTaGCAAAGCTGGTCACAACTG +
Preference number: 5 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQRPPLP*QSWSQL
Trigger: CAGTTGTGACCAGCTTTGCAAAGGGAGCGGTGGGCG...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCACTCCGCCAGGCCCACTaGGTCTTACTGTTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEALRQAH*VLLLEV
Trigger: CACCTCTAACAGTAAGACCAAGTGGGCCTGGCGGAG...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGCCCAGCACCGTGCACTaGCTCATAATGAACTCGGCA +
Preference number: 5 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWPSTVH*LIMNSA
Trigger: TGCCGAGTTCATTATGAGCAAGTGCACGGTGCTGGG...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS GCA 90 bp GTTGTCCCGGGTCTCCACAAAAGCATAAAGCAGGACGGCACTGCCTaGAATAAGGCTGCCAGGGCACAAGTAGAAAAGCCAGCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: VVPGLHKSIKQDGTA*NKAARAQVEKPAAP
Trigger: TGGCGCCGCTGGCTTTTCTACTTGTGCCCTGGCAGCCTTATTGCAGGCAGTGCCGTCCTGCTTTATGCTTTTGTGGAGACCCGGGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS GCA 90 bp CTCTCCTCCCCCATTCCTCACCTCACCTTTGGAACAGGTCACTGCTaGATCCCCCAGGCTCAAGGGCACCTCGTGAGTCAAGCATCCAAA +
Preference number: 5 (lower is better)
Translates to: LSSPIPHLTFGTGHC*IPQAQGHLVSQASK
Trigger: TTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAGGTGAGGTGAGGAATGGGGGAGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000490199.2
CDS-3UTR CAA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTTGCAGGGGTGGGGCTTaGGGACGCAGACGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPCRGGA*GRRRSD
Trigger: GTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGCA...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCGGGCTGTGGGCACTCTaGCAACCGCACACACAGCTG +
Preference number: 5 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVGLWAL*QPHTQL
Trigger: CAGCTGTGTGTGCGGTTGCAAGAGTGCCCACAGCCC...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCAAAGGTGTCCAGCTCGTaGCGCAGAGTCGGGCGCACT +
Preference number: 5 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPKVSSS*RRVGRT
Trigger: AGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTT...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGCGCACGGAGCTCGCATaGAGCTGGAGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALRTELA*SWSSRL
Trigger: CAGCCTGGAGCTCCAGCTCAATGCGAGCTCCGTGCG...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCCGGCCAGGGACTCTTaGGAACAGGTCACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCPARDS*EQVTAA
Trigger: TGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGCCTCTCCACCCGGCCTaGCACTCGCAGGCTGCGTAC +
Preference number: 5 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWPLHPA*HSQAAY
Trigger: GTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGG...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCCTCTCCACCCGGCCTaGCACTCGCAGGCTGCGTAC +
Preference number: 5 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVPLHPA*HSQAAY
Trigger: GTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCCGGAAAGGACTCAGCTaGCGGGGTGAGCAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVRKGLS*RGEQVE
Trigger: CTCCACCTGCTCACCCCGCAAGCTGAGTCCTTTCCG...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCTGCAGGAGGGACTCCTaGGTCCTGAGGGACTCTGTG +
Preference number: 5 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVCRRDS*VLRDSV
Trigger: CACAGAGTCCCTCAGGACCAAGGAGTCCCTCCTGCA...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTCAGAATCCCAGCTATTaGGGTTCAAGCATCCCAGTG +
Preference number: 5 (lower is better)
Translates to: QKPPAVAPISPADSLRGPQNPSY*GSSIPV
Trigger: CACTGGGATGCTTGAACCCAAATAGCTGGGATTCTG...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCAGTCATAAGACGCCATaGCACCCACATGCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: ESRGQADCLCGRGARGRSSHKTP*HPHAEE
Trigger: CTCCTCTGCATGTGGGTGCAATGGCGTCTTATGACT...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS TCA 90 bp CAGTCTTGGCACGAGGGGGCAGCAGGAAGCCCACACTGCCCGCAATaGGCATATGCCAAATGCTGTGAATGTAGAAGTAGTTGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: QSWHEGAAGSPHCPQ*AYAKCCECRSSCPG
Trigger: CCCGGGACAACTACTTCTACATTCACAGCATTTGGCATATGCTCATTGCGGGCAGTGTGGGCTTCCTGCTGCCCCCTCGTGCCAAGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTGGGCTGTGGGCACTCTaGCAACCGCACACACAGCTG +
Preference number: 5 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPGLWAL*QPHTQL
Trigger: CAGCTGTGTGTGCGGTTGCAAGAGTGCCCACAGCCC...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTGGGCTGTGGGCACTCTaGCAACCGCACACACAGCTG +
Preference number: 5 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCGLWAL*QPHTQL
Trigger: CAGCTGTGTGTGCGGTTGCAAGAGTGCCCACAGCCC...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTACTAGAGGGAGAGACTaGGGTAAACACAGAGATGAG +
Preference number: 5 (lower is better)
Translates to: QKPPAVAPISPADSLRGPTRGRD*GKHRDE
Trigger: CTCATCTCTGTGTTTACCCAAGTCTCTCCCTCTAGT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CAA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCGGAAAGGACTCAGCTaGCGGGGTGAGCAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCRKGLS*RGEQVE
Trigger: CTCCACCTGCTCACCCCGCAAGCTGAGTCCTTTCCG...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCAAATACAGCACCTGCTaGACCACGGGCTGTAAACGA +
Preference number: 5 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGKYSTC*TTGCKR
Trigger: TCGTTTACAGCCCGTGGTCAAGCAGGTGCTGTATTT...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCTGCAGGAGGGACTCCTaGGTCCTGAGGGACTCTGTG +
Preference number: 5 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVCRRDS*VLRDSV
Trigger: CACAGAGTCCCTCAGGACCAAGGAGTCCCTCCTGCA...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGCAGGAGGGACTCCTaGGTCCTGAGGGACTCTGTG +
Preference number: 5 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPCRRDS*VLRDSV
Trigger: CACAGAGTCCCTCAGGACCAAGGAGTCCCTCCTGCA...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTGCTCCTGACAGGGCTTaGTCTCCCTGGGAAGGAATC +
Preference number: 5 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCAPDRA*SPWEGI
Trigger: GATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGC...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCCCTCTGCATTCCCCCTaGCTGTTCCCTCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSPLHSP*LFPLHV
Trigger: GACATGGAGAGGGAACAGCAAGGGGGAATGCAGAGG...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGATGTGGTCACTGCACTTaGTCCTCCAAGGTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGCGHCT*SSKVSQ
Trigger: TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACA...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCATGTGGTCACTGCACTTaGTCCTCCAAGGTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEACGHCT*SSKVSQ
Trigger: TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACA...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACGCAAGGAAGGGCTGTTaGAATCTTGGGATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHARKGC*NLGISP
Trigger: GGGGGAGATCCCAAGATTCAAACAGCCCTTCCTTGC...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCTCAGAAGTGGCTGTGTaGCCTCCACCTACATTTCAG +
Preference number: 5 (lower is better)
Translates to: ESRGQADCLCGRGARGRSSEVAV*PPPTFQ
Trigger: CTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGA...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAGATAAGACTGTCGCATaGTTCTACGGGGTTGTGACG +
Preference number: 5 (lower is better)
Translates to: TAPVPAPSILQSLLHSTADKTVA*FYGVVT
Trigger: CGTCACAACCCCGTAGAACAATGCGACAGTCTTATC...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCAGTCATAAGACGCCATaGCACCCACATGCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPSHKTP*HPHAEE
Trigger: CTCCTCTGCATGTGGGTGCAATGGCGTCTTATGACT...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS GCA 90 bp AAGAGACTGGGTCCAAGCAGGTTCCAGAGTCCATGTCGGTCAAGCTaGAGAGCCATGGACAGCAGCATAGCTCCCAGCAAATACAGCACC +
Preference number: 5 (lower is better)
Translates to: KRLGPSRFQSPCRSS*RAMDSSIAPSKYST
Trigger: GGTGCTGTATTTGCTGGGAGCTATGCTGCTGTCCATGGCTCTGCAGCTTGACCGACATGGACTCTGGAACCTGCTTGGACCCAGTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATACAGGGCTGAGCGATaGTGTGGGGAGAGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPYRAER*CGERVC
Trigger: GCAAACCCTCTCCCCACACAATCGCTCAGCCCTGTA...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCCTGGGCACAAAGACCTaGTACAGGGCTGAGCGATTG +
Preference number: 5 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSLGTKT*YRAERL
Trigger: CAATCGCTCAGCCCTGTACAAGGTCTTTGTGCCCAG...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGCACAGGCCACAGAGCTaGAGTTGTGCAGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRHRPQS*SCAGVG
Trigger: CCCCACCCCTGCACAACTCAAGCTCTGTGGCCTGTG...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGGGCTGTGGGCACTCTaGCAACCGCACACACAGCTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWGLWAL*QPHTQL
Trigger: CAGCTGTGTGTGCGGTTGCAAGAGTGCCCACAGCCC...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCGGCCAGGGACTCTTaGGAACAGGTCACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCPARDS*EQVTAA
Trigger: TGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGG...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCGGCAGAAACATGAGGTaGCTCAGGCAGAGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSGRNMR*LRQSRS
Trigger: ACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCC...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTGGCAGAAACATGAGGTaGCTCAGGCAGAGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSGRNMR*LRQSRS
Trigger: ACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCC...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGACCCAAAAGTTCCCCCTaGCTCCTTGAAGATGATGAG +
Preference number: 5 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGPKSSP*LLEDDE
Trigger: CTCATCATCTTCAAGGAGCAAGGGGGAACTTTTGGG...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGATGCCTGAGGTGCGGTaGGGCAGTGTCCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRMPEVR*GSVQLR
Trigger: CCTCAGCTGGACACTGCCCAACCGCACCTCAGGCAT...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp TTCAAATGTTCCAATAGCTGTGGTCACTGCACTTTGTCCTCCAAGGTCTCCCAAACCCCGTGGTCAGTCTaGGCACGAGGGGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: FKCSNSCGHCTLSSKVSQTPWSV*ARGGSR
Trigger: CCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGGT...TTGGGAGACCTTGGAGGACAAAGTGCAGTGACCACAGCTATTGGAACATTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAGCTCCTGACAGGGCTTaGTCTCCCTGGGAAGGAATC +
Preference number: 5 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPAPDRA*SPWEGI
Trigger: GATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGC...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GTCCTTAAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTAGCCTGAGGCCAGAGTaGCTGAGCCTCTGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: VLKKDSMMQGDSRPSGSSSLRPE*LSLWEN
Trigger: ATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT...AGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTTAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCCGGCTTCCTTCTGTGTaGGGTGTGGGCATCATAAGG +
Preference number: 5 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSRLPSV*GVGIIR
Trigger: CCTTATGATGCCCACACCCAACACAGAAGGAAGCCG...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTCGGCTTCCTTCTGTGTaGGGTGTGGGCATCATAAGG +
Preference number: 5 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCRLPSV*GVGIIR
Trigger: CCTTATGATGCCCACACCCAACACAGAAGGAAGCCG...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCCGGCTTCCTTCTGTGTaGGGTGTGGGCATCATAAGG +
Preference number: 5 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESRLPSV*GVGIIR
Trigger: CCTTATGATGCCCACACCCAACACAGAAGGAAGCCG...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCGCTGAGATCGCACCATaGCATTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVAEIAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAATGCAATGGTGCGATCTCAGC...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CAAAAGCCTCCGGCAGTAGCTCCCATCAGCCCTGCTGATTCCCTGAGGGGCCCTACATCCTACAGCACTTaGTCAGGATCTTCCACTTCA +
Preference number: 5 (lower is better)
Translates to: QKPPAVAPISPADSLRGPTSYST*SGSSTS
Trigger: TGAAGTGGAAGATCCTGACAAAGTGCTGTAGGATGT...AGGGCCCCTCAGGGAATCAGCAGGGCTGATGGGAGCTACTGCCGGAGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATTGGCCACAGAGAAGTTaGCATGTGATTTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHWPQRS*HVIWKA
Trigger: TGCCTTCCAAATCACATGCAAACTTCTCTGTGGCCA...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCGGGTGTGGGTTAGGGTaGGCCACAGAGAAGTTTGCA +
Preference number: 5 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSGCGLG*ATEKFA
Trigger: TGCAAACTTCTCTGTGGCCAACCCTAACCCACACCC...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGATCAGAAGTGGCTGTGTaGCCTCCACCTACATTTCAG +
Preference number: 5 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGSEVAV*PPPTFQ
Trigger: CTGAAATGTAGGTGGAGGCAACACAGCCACTTCTGA...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGATACTCCGTGAATGTGTaGGGGAACGCCCTCCTCATA +
Preference number: 5 (lower is better)
Translates to: LLCHTARKQESQIQAFRGYSVNV*GNALLI
Trigger: TATGAGGAGGGCGTTCCCCAACACATTCACGGAGTA...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTCTGGAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCTGGAGGTGGTCCTGTTaGTGTTCTGCCTGGGCATCT +
Preference number: 5 (lower is better)
Translates to: LWKDAVLLTGLCLPGKESWRWSC*CSAWAS
Trigger: AGATGCCCAGGCAGAACACAAACAGGACCACCTCCA...GGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCGAGAGGTCAAGTGTCTaGGTCAGTGTCACACAGCTA +
Preference number: 5 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPERSSV*VSVTQL
Trigger: TAGCTGTGTGACACTGACCAAGACACTTGACCTCTC...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGAAGGGGGAATTGATTTaGAGGCAAGACCTTGGGTTC +
Preference number: 5 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWKGELI*RQDLGF
Trigger: GAACCCAAGGTCTTGCCTCAAAATCAATTCCCCCTT...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS GCA 90 bp TGCCCCCTGCAGGAAATGAGCTTTCTCTTCTTGGAGCCAGTGCTCTaGCCTCCTCAGGCTTCTGGCCTCCTAATGAGCACTAGTGTTAAC +
Preference number: 5 (lower is better)
Translates to: CPLQEMSFLFLEPVL*PPQASGLLMSTSVN
Trigger: GTTAACACTAGTGCTCATTAGGAGGCCAGAAGCCTGAGGAGGGCAGAGCACTGGCTCCAAGAAGAGAAAGCTCATTTCCTGCAGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS-3UTR CAA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGTACAGGGCTGAGCGATaGTGTGGGGAGAGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: KALDNFTGLHIWPRSGREYRAER*CGERVC
Trigger: GCAAACCCTCTCCCCACACAATCGCTCAGCCCTGTA...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTCACAGGCCACAGAGCTaGAGTTGTGCAGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSHRPQS*SCAGVG
Trigger: CCCCACCCCTGCACAACTCAAGCTCTGTGGCCTGTG...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAGGGGAAGGGCCACACTaGGGCCAAAGAAGATGTAGA +
Preference number: 5 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPGEGPH*GQRRCR
Trigger: TCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCC...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTCCGGCCAGGGACTCTTaGGAACAGGTCACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVPARDS*EQVTAA
Trigger: TGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGG...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGCCGGCCAGGGACTCTTaGGAACAGGTCACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGPARDS*EQVTAA
Trigger: TGCAGCAGTGACCTGTTCCAAAGAGTCCCTGGCCGG...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAGGCAGAAACATGAGGTaGCTCAGGCAGAGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVGRNMR*LRQSRS
Trigger: ACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCC...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAGTTCCCCCTTGCTCCTaGAAGATGATGAGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: LLCHTARKQESQIQAFRGVPPCS*KMMRFQ
Trigger: TTGGAACCTCATCATCTTCAAGGAGCAAGGGGGAAC...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGCTTCTCACTACTCACTaGGCCACACCATTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQLLTTH*ATPFSA
Trigger: AGCAGAGAATGGTGTGGCCAAGTGAGTAGTGAGAAG...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGACTAACAGCTCTTAAATaGGTCCCCTCCTTTCCACCG +
Preference number: 5 (lower is better)
Translates to: LLCHTARKQESQIQAFRGLTALK*VPSFPP
Trigger: CGGTGGAAAGGAGGGGACCAATTTAAGAGCTGTTAG...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCGTTTGCGGGACTGAATaGTCACTCAGAAGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPVCGTE*SLRSFQ
Trigger: CTGAAAGCTTCTGAGTGACAATTCAGTCCCGCAAAC...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCCATGTCTTCGCACCCTaGTATGTATTGTGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGHVFAP*YVLCCS
Trigger: AGAACAGCACAATACATACAAGGGTGCGAAGACATG...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CAAGGCGCAGAACTGCAACGTGACCCAGTATTCAGATTCTCTGTCCACTCTCTCACTAGGGAGGATCGCTaGAACTTGGGAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: QGAELQRDPVFRFSVHSLTREDR*NLGGGG
Trigger: GCCTCCACCTCCCAAGTTCAAGCGATCCTCCCTAGT...GAGAGAGTGGACAGAGAATCTGAATACTGGGTCACGTTGCAGTTCTGCGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GTGAGCTCCTTCAGGGCAGGATTCAGTCGGGTCTGGCTCATCTCTGTAGCTCCCTGGCCACAGAGAAGTTaGCATGTGATTTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VSSFRAGFSRVWLISVAPWPQRS*HVIWKA
Trigger: TGCCTTCCAAATCACATGCAAACTTCTCTGTGGCCA...GGGAGCTACAGAGATGAGCCAGACCCGACTGAATCCTGCCCTGAAGGAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCTACTTCTATGAGATCTaGGCAGTGCTAAAACTGGCC +
Preference number: 5 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGYFYEI*AVLKLA
Trigger: GGCCAGTTTTAGCACTGCCAAGATCTCATAGAAGTA...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TCCCGTCTGACTCCAGGGCCATCCTCATCTTCTCTGCCACACAGCCAGGAAGCAAGGCCAGAAAGTAAGTaGCTTGGCTTTCATGACCAC +
Preference number: 5 (lower is better)
Translates to: SRLTPGPSSSSLPHSQEARPESK*LGFHDH
Trigger: GTGGTCATGAAAGCCAAGCAACTTACTTTCTGGCCT...TGCTTCCTGGCTGTGTGGCAGAGAAGATGAGGATGGCCCTGGAGTCAGACGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGCGCCCACCGCTCCCTTaGCAAAGCTGGTCACAACTG +
Preference number: 5 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGRPPLP*QSWSQL
Trigger: CAGTTGTGACCAGCTTTGCAAAGGGAGCGGTGGGCG...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTTGCTCCTGATGCAGGTCCACCAGAGGCTGGTGGGGCTTCTGCTCCGCATCATCTGAGGCTGAGAACATaGTTAACAAGTGGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: LAPDAGPPEAGGASAPHHLRLRT*LTSGRA
Trigger: AGCTCTTCCACTTGTTAACAATGTTCTCAGCCTCAG...ATGATGCGGAGCAGAAGCCCCACCAGCCTCTGGTGGACCTGCATCAGGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS TCA 90 bp ACTAGAGGGAGAGACTTGGGTAAACACAGAGATGAGGGCAAAGGCTaGGATAATGGGTTGGGCTGGGCTGGACACTGGGGCTTGAACAAG +
Preference number: 5 (lower is better)
Translates to: TRGRDLGKHRDEGKG*DNGLGWAGHWGLNK
Trigger: CTTGTTCAAGCCCCAGTGTCCAGCCCAGCCCAACCCATTATCTCAGCCTTTGCCCTCATCTCTGTGTTTACCCAAGTCTCTCCCTCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377988.6
ENST00000473947.1
ENST00000643932.2
CDS CCA 90 bp ATGAGGTTCCAAACAGCCAGGAATGTGTCCTCAGGAACATGGAAGTaGAAGAGCTCGGTGCTGGCAAAGGAGCGGAAAGGACTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: MRFQTARNVSSGTWK*KSSVLAKERKGLSL
Trigger: CAAGCTGAGTCCTTTCCGCTCCTTTGCCAGCACCGAGCTCTTCCACTTCCATGTTCCTGAGGACACATTCCTGGCTGTTTGGAACCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000439587.6
ENST00000473947.1
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGTACAGGGCTGAGCGATaGTGTGGGGAGAGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRYRAER*CGERVC
Trigger: GCAAACCCTCTCCCCACACAATCGCTCAGCCCTGTA...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTGGGGAAGGGCCACACTaGGGCCAAAGAAGATGTAGA +
Preference number: 5 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCGEGPH*GQRRCR
Trigger: TCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCC...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCGGCAGAAACATGAGGTaGCTCAGGCAGAGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: SLRPELLSLWENLEIWFPGRNMR*LRQSRS
Trigger: ACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCC...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCCCAAAAGTTCCCCCTaGCTCCTTGAAGATGATGAG +
Preference number: 5 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVPKSSP*LLEDDE
Trigger: CTCATCATCTTCAAGGAGCAAGGGGGAACTTTTGGG...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCAAATACAGCACCTGCTaGACCACGGGCTGTAAACGA +
Preference number: 5 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVKYSTC*TTGCKR
Trigger: TCGTTTACAGCCCGTGGTCAAGCAGGTGCTGTATTT...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCCGGCTTCCTTCTGTGTaGGGTGTGGGCATCATAAGG +
Preference number: 5 (lower is better)
Translates to: SLRPELLSLWENLEIWFPRLPSV*GVGIIR
Trigger: CCTTATGATGCCCACACCCAACACAGAAGGAAGCCG...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGGCTGAGATCGCACCATaGCATTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRAEIAP*HSSLGN
Trigger: GTTGCCCAGGCTGGAATGCAATGGTGCGATCTCAGC...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTGCAAGGAAGGGCTGTTaGAATCTTGGGATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCARKGC*NLGISP
Trigger: GGGGGAGATCCCAAGATTCAAACAGCCCTTCCTTGC...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CACACAGACTCCACCTGTATCAAACGAGGATACCAGCCACCCAGACAGCCCCAGATGCATCCTTTCCCATaGCACTTTGAGATCGCTCTC +
Preference number: 5 (lower is better)
Translates to: HTDSTCIKRGYQPPRQPQMHPFP*HFEIAL
Trigger: GAGAGCGATCTCAAAGTGCAATGGGAAAGGATGCAT...CTGGGGCTGTCTGGGTGGCTGGTATCCTCGTTTGATACAGGTGGAGTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGATACTTCTATGAGATCTaGGCAGTGCTAAAACTGGCC +
Preference number: 5 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGYFYEI*AVLKLA
Trigger: GGCCAGTTTTAGCACTGCCAAGATCTCATAGAAGTA...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GAAAGCAGGGGGCAAGCAGACTGTCTATGTGGCAGGGGAGCAAGAGGCAGGTCCAGGTGTGGAATCCTTTaGTCCACTTACTTTCCTTAC +
Preference number: 5 (lower is better)
Translates to: ESRGQADCLCGRGARGRSRCGIL*STYFPY
Trigger: GTAAGGAAAGTAAGTGGACAAAAGGATTCCACACCT...GGACCTGCCTCTTGCTCCCCTGCCACATAGACAGTCTGCTTGCCCCCTGCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCCCTCGTGTGACATCATaGTCAGTATCATTTCTCCTA +
Preference number: 5 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGPRVTS*SVSFLL
Trigger: TAGGAGAAATGATACTGACAATGATGTCACACGAGG...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGGAGCACACAGGCTTaGTCCAAAAGACAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPWSTQA*SKRQGV
Trigger: CACTCCCTGTCTTTTGGACAAAGCCTGTGTGCTCCA...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAAAGGGGGAATTGATTTaGAGGCAAGACCTTGGGTTC +
Preference number: 5 (lower is better)
Translates to: LLCHTARKQESQIQAFRGKGELI*RQDLGF
Trigger: GAACCCAAGGTCTTGCCTCAAAATCAATTCCCCCTT...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GCTGGCCCCCTTCCCTCCGGGAATCCCACATGCACCTCAAACTGTCCAAAGTGGCTATCAGACCTCAGGTaGGAAGTTGCTAGAAACATA +
Preference number: 5 (lower is better)
Translates to: AGPLPSGNPTCTSNCPKWLSDLR*EVARNI
Trigger: TATGTTTCTAGCAACTTCCAACCTGAGGTCTGATAG...CCACTTTGGACAGTTTGAGGTGCATGTGGGATTCCCGGAGGGAAGGGGGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGACTGAGGCTGAGAACATaGTTAACAAGTGGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGLRLRT*LTSGRA
Trigger: AGCTCTTCCACTTGTTAACAATGTTCTCAGCCTCAG...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS TCA 90 bp CAGACATTCCCAAACCCTCGGAGAACGTGGTGGAAATACAGACTGTaGCCCACCACCATGCACAAGCACCCAGTGATAAGATGCAGACAC +
Preference number: 5 (lower is better)
Translates to: QTFPNPRRTWWKYRL*PTTMHKHPVIRCRH
Trigger: GTGTCTGCATCTTATCACTGGGTGCTTGTGCATGGTGGTGGGTCACAGTCTGTATTTCCACCACGTTCTCCGAGGGTTTGGGAATGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377996.5
ENST00000439587.6
CDS CCA 90 bp AAGATGATGAGGTTCCAAACAGCCAGGAATGTGTCCTCAGGAACATaGAAGTGGAAGAGCTCGGTGCTGGCAAAGGAGCGGAAAGGACTC +
Preference number: 5 (lower is better)
Translates to: KMMRFQTARNVSSGT*KWKSSVLAKERKGL
Trigger: GAGTCCTTTCCGCTCCTTTGCCAGCACCGAGCTCTTCCACTTCCATGTTCCTGAGGACACATTCCTGGCTGTTTGGAACCTCATCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000439587.6
ENST00000473947.1
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGACTAGAGGGAGAGACTaGGGTAAACACAGAGATGAG +
Preference number: 5 (lower is better)
Translates to: PGTSASFCVGCGHHKESLTRGRD*GKHRDE
Trigger: CTCATCTCTGTGTTTACCCAAGTCTCTCCCTCTAGT...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377988.6
ENST00000643932.2
CDS-3UTR CAA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGAGCCTGAGGCCAGAGTaGCTGAGCCTCTGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWSLRPE*LSLWEN
Trigger: ATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCACTAACAGCTCTTAAATaGGTCCCCTCCTTTCCACCG +
Preference number: 5 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPLTALK*VPSFPP
Trigger: CGGTGGAAAGGAGGGGACCAATTTAAGAGCTGTTAG...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GAGGCACCTGTAGCTGATGATGGATGCCATCCTCCATCCAGCCTCAGTAACAGGATGCATCCTTTCCCATaGCACTTTGAGATCGCTCTC +
Preference number: 5 (lower is better)
Translates to: EAPVADDGCHPPSSLSNRMHPFP*HFEIAL
Trigger: GAGAGCGATCTCAAAGTGCAATGGGAAAGGATGCAT...CCTGTTACTGAGGCTGGATGGAGGATGGCATCCATCATCAGCTACAGGTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp ACAGCCCCAGTCCCAGCTCCATCCATCCTGCAATCCCTCCTCCACAGCACAGCAGCACCCTTGTATGTATaGTGCTGTTCTCTGATAATA +
Preference number: 5 (lower is better)
Translates to: TAPVPAPSILQSLLHSTAAPLYV*CCSLII
Trigger: TATTATCAGAGAACAGCACAATACATACAAGGGTGC...TGCTGTGCTGTGGAGGAGGGATTGCAGGATGGATGGAGCTGGGACTGGGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GGAAGGAGACACCCCATTTCACAACCCAGACACCCAGGCCTAGTGAAGCCGGGCGCACCCTTGTATGTATaGTGCTGTTCTCTGATAATA +
Preference number: 5 (lower is better)
Translates to: GRRHPISQPRHPGLVKPGAPLYV*CCSLII
Trigger: TATTATCAGAGAACAGCACAATACATACAAGGGTGC...GCCCGGCTTCACTAGGCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TGGACACACCTGGGCTTCCTCCTAGGAATACCTGACGCTGGCCTTTCCCGAGGATCTGATCAAGGACTTTaGACAGCTCCCATTACCATT +
Preference number: 5 (lower is better)
Translates to: WTHLGFLLGIPDAGLSRGSDQGL*TAPITI
Trigger: AATGGTAATGGGAGCTGTCAAAAGTCCTTGATCAGA...TCCTCGGGAAAGGCCAGCGTCAGGTATTCCTAGGAGGAAGCCCAGGTGTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGGGGTGTGGGTTAGGGTaGGCCACAGAGAAGTTTGCA +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRGCGLG*ATEKFA
Trigger: TGCAAACTTCTCTGTGGCCAACCCTAACCCACACCC...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTGTCACAAAGCACTGTCCTCACAACCAACCCAGGAGCGAAGGGCAGGAGGGGACTATCAGACCTCAGGTaGGAAGTTGCTAGAAACATA +
Preference number: 5 (lower is better)
Translates to: LSQSTVLTTNPGAKGRRGLSDLR*EVARNI
Trigger: TATGTTTCTAGCAACTTCCAACCTGAGGTCTGATAG...TCCCCTCCTGCCCTTCGCTCCTGGGTTGGTTGTGAGGACAGTGCTTTGTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGCCCAGCACCGTGCACTaGCTCATAATGAACTCGGCA +
Preference number: 5 (lower is better)
Translates to: HTHTHTPQILQIGLNRNWPSTVH*LIMNSA
Trigger: TGCCGAGTTCATTATGAGCAAGTGCACGGTGCTGGG...CCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGAGTGCAGTTGCAGAGTTaGAACTTTAAATTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LLCHTARKQESQIQAFRGVQLQS*NFKLGR
Trigger: CCTGCCCAATTTAAAGTTCAAACTCTGCAACTGCAC...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS TCA 90 bp ACCAATGGAATGGAAAATTGTCCTCGCGTTGGTAGAAGCAGCCAATaGGATGAAAAGAGCCCGCCTCCAAAGTGGCTGCAGAGGCAATGG +
Preference number: 5 (lower is better)
Translates to: TNGMENCPRVGRSSQ*DEKSPPPKWLQRQW
Trigger: CCATTGCCTCTGCAGCCACTTTGGAGGCGGGCTCTTTTCATCTCATTGGCTGCTTCTACCAACGCGAGGACAATTTTCCATTCCATTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS-3UTR CAA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCCGCACGGAGCTCGCATaGAGCTGGAGCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: HSCDISCTPETCTCYSNFRTELA*SWSSRL
Trigger: CAGCCTGGAGCTCCAGCTCAATGCGAGCTCCGTGCG...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTGTTCCCCCTTGCTCCTaGAAGATGATGAGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPVPPCS*KMMRFQ
Trigger: TTGGAACCTCATCATCTTCAAGGAGCAAGGGGGAAC...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTCCTCCCAAAAGTTCCCCCTaGCTCCTTGAAGATGATGAG +
Preference number: 5 (lower is better)
Translates to: RAPGPWKSFVSLRKTPCPPKSSP*LLEDDE
Trigger: CTCATCATCTTCAAGGAGCAAGGGGGAACTTTTGGG...AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCAAATACAGCACCTGCTaGACCACGGGCTGTAAACGA +
Preference number: 5 (lower is better)
Translates to: SLRPELLSLWENLEIWFPKYSTC*TTGCKR
Trigger: TCGTTTACAGCCCGTGGTCAAGCAGGTGCTGTATTT...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTGCAGCAACTCATGCCTaGTCTGTCAAAACCCAGAGC +
Preference number: 5 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVAATHA*SVKTQS
Trigger: GCTCTGGGTTTTGACAGACAAGGCATGAGTTGCTGC...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCAAGAGCTATGGGAGGTTaGGCTTTCTTTATCCTGACC +
Preference number: 5 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPRAMGG*AFFILT
Trigger: GGTCAGGATAAAGAAAGCCAAACCTCCCATAGCTCT...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AAACCCCCACGCCTGTGTCCAGTGTCAGAATTTGAGATGGACATAGTTCTGTCTTGGAGGTGGTCCTGTTaGTGTTCTGCCTGGGCATCT +
Preference number: 5 (lower is better)
Translates to: KPPRLCPVSEFEMDIVLSWRWSC*CSAWAS
Trigger: AGATGCCCAGGCAGAACACAAACAGGACCACCTCCA...AGACAGAACTATGTCCATCTCAAATTCTGACACTGGACACAGGCGTGGGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTTCTCTGCCACACAGCCAGGAAGCAGGAATCCCAGATCCAGGCATTTCGGGGACAGAAAGTAAGTTGCTaGGCTTTCATGACCACAGTT +
Preference number: 5 (lower is better)
Translates to: LLCHTARKQESQIQAFRGQKVSC*AFMTTV
Trigger: AACTGTGGTCATGAAAGCCAAGCAACTTACTTTCTG...TCCCCGAAATGCCTGGATCTGGGATTCCTGCTTCCTGGCTGTGTGGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTGAGAGGTCAAGTGTCTaGGTCAGTGTCACACAGCTA +
Preference number: 5 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCERSSV*VSVTQL
Trigger: TAGCTGTGTGACACTGACCAAGACACTTGACCTCTC...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGGTGCAGTTGCAGAGTTaGAACTTTAAATTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PGTSASFCVGCGHHKESLVQLQS*NFKLGR
Trigger: CCTGCCCAATTTAAAGTTCAAACTCTGCAACTGCAC...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS CCA 90 bp GAACTGCAGCACATCGTAGTCCATGATGCAGAAAACCACGATGCCTaGCTGGTCACAGGCATGATAGAACGTGGAGAAGAACATGGTGAA +
Preference number: 5 (lower is better)
Translates to: ELQHIVVHDAENHDA*LVTGMIERGEEHGE
Trigger: TTCACCATGTTCTTCTCCACGTTCTATCATGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCATCATGGACTACGATGTGCTGCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCCACAGGCCACAGAGCTaGAGTTGTGCAGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: HSCDISCTPETCTCYSNFHRPQS*SCAGVG
Trigger: CCCCACCCCTGCACAACTCAAGCTCTGTGGCCTGTG...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AGGAAGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTAAATACAGCACCTGCTaGACCACGGGCTGTAAACGA +
Preference number: 5 (lower is better)
Translates to: RKPEARVAEPLGKSGNLVKYSTC*TTGCKR
Trigger: TCGTTTACAGCCCGTGGTCAAGCAGGTGCTGTATTT...AACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp GGAAGTTCTCCATGTCCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCAAGAGTTTTGTGTCCTaGAGAAAGACTCCATGTCCT +
Preference number: 5 (lower is better)
Translates to: GSSPCPGKGSRSLEEFCVKSFVS*RKTPCP
Trigger: AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTT...GACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGGACATGGAGAACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGCTTCTCACTACTCACTaGGCCACACCATTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRLLTTH*ATPFSA
Trigger: AGCAGAGAATGGTGTGGCCAAGTGAGTAGTGAGAAG...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GAGAAATCTGACCAAAGTCATACAGCAGAAAAGGAACAAAGGCCCCGATTCAAATCCAGCACTGTCATATaGCTGGCCCCCTTCCCTCCG +
Preference number: 5 (lower is better)
Translates to: EKSDQSHTAEKEQRPRFKSSTVI*LAPFPP
Trigger: CGGAGGGAAGGGGGCCAGCAATATGACAGTGCTGGA...TTTGAATCGGGGCCTTTGTTCCTTTTCTGCTGTATGACTTTGGTCAGATTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AAGGCCTTAGACAACTTTACGGGTCTCCACATATGGCCCAGAAGTGGCAGAGAGGTTTGCGGGACTGAATaGTCACTCAGAAGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: KALDNFTGLHIWPRSGREVCGTE*SLRSFQ
Trigger: CTGAAAGCTTCTGAGTGACAATTCAGTCCCGCAAAC...CTCTCTGCCACTTCTGGGCCATATGTGGAGACCCGTAAAGTTGTCTAAGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCAACATCCTACAGCACTTaGTCAGGATCTTCCACTTCA +
Preference number: 5 (lower is better)
Translates to: LGRAPGPWKSFVSLRKTPTSYST*SGSSTS
Trigger: TGAAGTGGAAGATCCTGACAAAGTGCTGTAGGATGT...TGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATCATGTCTTCGCACCCTaGTATGTATTGTGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHHVFAP*YVLCCS
Trigger: AGAACAGCACAATACATACAAGGGTGCGAAGACATG...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGGTCCAAATTCTTCAGTaGAATCCTCAAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGVQILQ*NPQGPP
Trigger: TGGAGGGCCTTGAGGATTCAACTGAAGAATTTGGAC...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCGCAGAAGTAACAGTTTaGCACAGATTTCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSAEVTV*HRFLQL
Trigger: CAGTTGGAGAAATCTGTGCAAAACTGTTACTTCTGC...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AGCCTGAGGCCAGAGTTGCTGAGCCTCTGGGAAAATCTGGAAATTTGGTTTCCCAGAGCTATGGGAGGTTaGGCTTTCTTTATCCTGACC +
Preference number: 5 (lower is better)
Translates to: SLRPELLSLWENLEIWFPRAMGG*AFFILT
Trigger: GGTCAGGATAAAGAAAGCCAAACCTCCCATAGCTCT...GGGAAACCAAATTTCCAGATTTTCCCAGAGGCTCAGCAACTCTGGCCTCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATTACTCCGTGAATGTGTaGGGGAACGCCCTCCTCATA +
Preference number: 5 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYYSVNV*GNALLI
Trigger: TATGAGGAGGGCGTTCCCCAACACATTCACGGAGTA...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GAAAGATGCTGTGCTCCTGACAGGGCTTTGTCTCCCTGGGAAGGAATCCATGTCATGGGGCTGAAATATTaGATCTTCATGGCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: ERCCAPDRALSPWEGIHVMGLKY*IFMAQG
Trigger: TCCTTGGGCCATGAAGATCAAATATTTCAGCCCCAT...GACATGGATTCCTTCCCAGGGAGACAAAGCCCTGTCAGGAGCACAGCATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCTCCACCTACATTTCAGTGGCCAACACAATGGCAACAGGAAGGCACAGGACCAGATATGTCAGTTAGCTaGCAAAGTAACCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: PPPTFQWPTQWQQEGTGPDMSVS*QSNPGS
Trigger: AGACCCAGGGTTACTTTGCAAGCTAACTGACATATC...TGGTCCTGTGCCTTCCTGTTGCCATTGTGTTGGCCACTGAAATGTAGGTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AAGAAGGACTCCATGATGCAGGGGGACTCCAGGCCCTCAGGAAGTTCTCCATGTACCGAAGCTTTCTTCTaGTTATGCCCCTATCTTTTC +
Preference number: 5 (lower is better)
Translates to: KKDSMMQGDSRPSGSSPCTEAFF*LCPYLF
Trigger: GAAAAGATAGGGGCATAACAAGAAGAAAGCTTCGGT...ACATGGAGAACTTCCTGAGGGCCTGGAGTCCCCCTGCATCATGGAGTCCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTTACAGGGCTGAGCGATaGTGTGGGGAGAGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTYRAER*CGERVC
Trigger: GCAAACCCTCTCCCCACACAATCGCTCAGCCCTGTA...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GGACACAGAGTTATTTCTTTAGGGCCACAAGCCAATGGTTTCGTGTGCTGGTTCGTTCCCCCTTGCTCCTaGAAGATGATGAGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: GHRVISLGPQANGFVCWFVPPCS*KMMRFQ
Trigger: TTGGAACCTCATCATCTTCAAGGAGCAAGGGGGAAC...GAACCAGCACACGAAACCATTGGCTTGTGGCCCTAAAGAAATAACTCTGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATCCCAAAAGTTCCCCCTaGCTCCTTGAAGATGATGAG +
Preference number: 5 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYPKSSP*LLEDDE
Trigger: CTCATCATCTTCAAGGAGCAAGGGGGAACTTTTGGG...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATCAGAATCCCAGCTATTaGGGTTCAAGCATCCCAGTG +
Preference number: 5 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYQNPSY*GSSIPV
Trigger: CACTGGGATGCTTGAACCCAAATAGCTGGGATTCTG...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGGTCCAAATTCTTCAGTaGAATCCTCAAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRVQILQ*NPQGPP
Trigger: TGGAGGGCCTTGAGGATTCAACTGAAGAATTTGGAC...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCTGGGACCTCGGCTTCCTTCTGTGTTGGGTGTGGGCATCATAAGGAAAGTCTGTTGGTCAAACCTGGATaGATTCATCACTCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: PGTSASFCVGCGHHKESLLVKPG*IHHSSD
Trigger: ATCAGAAGAGTGATGAATCAATCCAGGTTTGACCAA...CAGACTTTCCTTATGATGCCCACACCCAACACAGAAGGAAGCCGAGGTCCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATGATAAGACTGTCGCATaGTTCTACGGGGTTGTGACG +
Preference number: 5 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYDKTVA*FYGVVT
Trigger: CGTCACAACCCCGTAGAACAATGCGACAGTCTTATC...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTCTCCGCCAGGCCCACTaGGTCTTACTGTTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTLRQAH*VLLLEV
Trigger: CACCTCTAACAGTAAGACCAAGTGGGCCTGGCGGAG...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGAGCTGTATCATTCTGTaGCGGTGTATGTGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGSCIIL*RCMCWR
Trigger: CCTCCAACACATACACCGCAACAGAATGATACAGCT...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GGGAACAAGAAATCTCTCTGCATCCCAGATGAACTGTCTGGACCTCTGACTGGGGATATGTCAGTTAGCTaGCAAAGTAACCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GNKKSLCIPDELSGPLTGDMSVS*QSNPGS
Trigger: AGACCCAGGGTTACTTTGCAAGCTAACTGACATATC...CCCAGTCAGAGGTCCAGACAGTTCATCTGGGATGCAGAGAGATTTCTTGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp ACCTCCACCAGATTCGTGCCTGGCTTCCCTCCTCGTGTGACATCATTGTCAGTAACCGAAGCTTTCTTCTaGTTATGCCCCTATCTTTTC +
Preference number: 5 (lower is better)
Translates to: TSTRFVPGFPPRVTSLSVTEAFF*LCPYLF
Trigger: GAAAAGATAGGGGCATAACAAGAAGAAAGCTTCGGT...TACTGACAATGATGTCACACGAGGAGGGAAGCCAGGCACGAATCTGGTGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AGGCACTCCAGCCTGAAGAAACTGCCCAAGAAGAGGGATGGGACTGGAGCACACTGCAACTTTGTGCAGTaGCAGAGTTTGAACTTTAAA +
Preference number: 5 (lower is better)
Translates to: RHSSLKKLPKKRDGTGAHCNFVQ*QSLNFK
Trigger: TTTAAAGTTCAAACTCTGCAACTGCACAAAGTTGCA...GTGTGCTCCAGTCCCATCCCTCTTCTTGGGCAGTTTCTTCAGGCTGGAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTAAGGTGTCCAGCTCGTaGCGCAGAGTCGGGCGCACT +
Preference number: 5 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESKVSSS*RRVGRT
Trigger: AGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTCGGAAAGGACTCAGCTaGCGGGGTGAGCAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESRKGLS*RGEQVE
Trigger: CTCCACCTGCTCACCCCGCAAGCTGAGTCCTTTCCG...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGAAGAGTTTTGTGTCCTaGAGAAAGACTCCATGTCCT +
Preference number: 5 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALKSFVS*RKTPCP
Trigger: AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTT...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATGTAAGAGTTTTGTGTCCTaGAGAAAGACTCCATGTCCT +
Preference number: 5 (lower is better)
Translates to: GRAPGPWKSFVSLRKTPCKSFVS*RKTPCP
Trigger: AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTT...ACATGGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACATGCTCTCCCAACTTCTaGGCATTATGTAAGACCCTC +
Preference number: 5 (lower is better)
Translates to: FDESRSLRQSWKETPHFTCSPNF*ALCKTL
Trigger: GAGGGTCTTACATAATGCCAAGAAGTTGGGAGAGCA...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GACCATCTATCCTTCACGGGCTGCTGCCAAGTTAATCGTCCCAAGAAAGCTCTGTCTGATCAAGGACTTTaGACAGCTCCCATTACCATT +
Preference number: 5 (lower is better)
Translates to: DHLSFTGCCQVNRPKKALSDQGL*TAPITI
Trigger: AATGGTAATGGGAGCTGTCAAAAGTCCTTGATCAGA...CAGAGCTTTCTTGGGACGATTAACTTGGCAGCAGCCCGTGAAGGATAGATGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTGAGGGCACCCCCATGTaGCTCATCTGCTGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIEGTPM*LICWLP
Trigger: GGGGAGCCAGCAGATGAGCAACATGGGGGTGCCCTC...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACAACAGGACCACACCTATaGTTAAGGGGGAAAAGCACA +
Preference number: 5 (lower is better)
Translates to: FDESRSLRQSWKETPHFTTGPHL*LRGKST
Trigger: TGTGCTTTTCCCCCTTAACAATAGGTGTGGTCCTGT...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATAGGCCAGAAAGTAAGTaGCTTGGCTTTCATGACCAC +
Preference number: 5 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYRPESK*LGFHDH
Trigger: GTGGTCATGAAAGCCAAGCAACTTACTTTCTGGCCT...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCTGGGAAGGGCTCCAGGTCCCTGGAAGAGTTTTGTGTCCTTGAGAAAGACTCCATTTCAGGTTTTACTTaGTCTTTACATCCCAGACTC +
Preference number: 5 (lower is better)
Translates to: PGKGSRSLEEFCVLEKDSISGFT*SLHPRL
Trigger: GAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAAT...GGAGTCTTTCTCAAGGACACAAAACTCTTCCAGGGACCTGGAGCCCTTCCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATAGCTGTATCATTCTGTaGCGGTGTATGTGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYSCIIL*RCMCWR
Trigger: CCTCCAACACATACACCGCAACAGAATGATACAGCT...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp ACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGAATTGGGTATCTAATCATATCATaGGCTGCTTACCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: THTHTPLRYCKSGSIGIGYLIIS*AAYLHH
Trigger: GTGGTGGAGGTAAGCAGCCAATGATATGATTAGATA...CCCAATTCCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp AACACACACACACACACACACACCCCTCAGATACTGCAAATCGGGCTCAATAGGCCTCGTGTGACATCATaGTCAGTATCATTTCTCCTA +
Preference number: 5 (lower is better)
Translates to: NTHTHTHTPQILQIGLNRPRVTS*SVSFLL
Trigger: TAGGAGAAATGATACTGACAATGATGTCACACGAGG...CCTATTGAGCCCGATTTGCAGTATCTGAGGGGTGTGTGTGTGTGTGTGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GCCTGTCTCCTTCTAAGAGGGCTCCACACCCCCAGAAAGAACTCTAGGAAGCATATTTCAGGTTTTACTTaGTCTTTACATCCCAGACTC +
Preference number: 5 (lower is better)
Translates to: ACLLLRGLHTPRKNSRKHISGFT*SLHPRL
Trigger: GAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAAT...ATGCTTCCTAGAGTTCTTTCTGGGGGTGTGGAGCCCTCTTAGAAGGAGACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TTTGATGAATCCAGGTCCTTACGGCAATCCTGGAAGGAGACACCCCATTTCACAAAGAGTTTTGTGTCCTaGAGAAAGACTCCATGTCCT +
Preference number: 5 (lower is better)
Translates to: FDESRSLRQSWKETPHFTKSFVS*RKTPCP
Trigger: AGGACATGGAGTCTTTCTCAAGGACACAAAACTCTT...TGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGTAAGGACCTGGATTCATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTTCCAGCACTGTCATATaGCTGGCCCCCTTCCCTCCG +
Preference number: 5 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIISSTVI*LAPFPP
Trigger: CGGAGGGAAGGGGGCCAGCAATATGACAGTGCTGGA...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCTGGAGCACACAGGCTTaGTCCAAAAGACAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: HSCDISCTPETCTCYSNFWSTQA*SKRQGV
Trigger: CACTCCCTGTCTTTTGGACAAAGCCTGTGTGCTCCA...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCGTTCCCCCTTGCTCCTaGAAGATGATGAGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: HSCDISCTPETCTCYSNFVPPCS*KMMRFQ
Trigger: TTGGAACCTCATCATCTTCAAGGAGCAAGGGGGAAC...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS-3UTR CAA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTTGCTCTCCCAACTTCTaGGCATTATGTAAGACCCTC +
Preference number: 5 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTCSPNF*ALCKTL
Trigger: GAGGGTCTTACATAATGCCAAGAAGTTGGGAGAGCA...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCACAGGACCACACCTATaGTTAAGGGGGAAAAGCACA +
Preference number: 5 (lower is better)
Translates to: HSCDISCTPETCTCYSNFTGPHL*LRGKST
Trigger: TGTGCTTTTCCCCCTTAACAATAGGTGTGGTCCTGT...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTATGGGGCTGAAATATTaGATCTTCATGGCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTMGLKY*IFMAQG
Trigger: TCCTTGGGCCATGAAGATCAAATATTTCAGCCCCAT...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CCCTTGCTGTTCCCTCTCCATGTCCAAACACGTGGTGACCTTAAGCTAACATATTGCAACTTTGTGCAGTaGCAGAGTTTGAACTTTAAA +
Preference number: 5 (lower is better)
Translates to: PLLFPLHVQTRGDLKLTYCNFVQ*QSLNFK
Trigger: TTTAAAGTTCAAACTCTGCAACTGCACAAAGTTGCA...ATATGTTAGCTTAAGGTCACCACGTGTTTGGACATGGAGAGGGAACAGCAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTTATCTAATCATATCATaGGCTGCTTACCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTYLIIS*AAYLHH
Trigger: GTGGTGGAGGTAAGCAGCCAATGATATGATTAGATA...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp ACCCTCATGGAAAGAGAAGGAATCCCAAATGGACAAATGATCTTTTCTGGCACTTTGGTCAAACCTGGATaGATTCATCACTCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: TLMEREGIPNGQMIFSGTLVKPG*IHHSSD
Trigger: ATCAGAAGAGTGATGAATCAATCCAGGTTTGACCAA...AGTGCCAGAAAAGATCATTTGTCCATTTGGGATTCCTTCTCTTTCCATGAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp CATTCTTGTGATATTTCTTGCACACCTGAGACGTGTACCTGCTATTCCAATTTCGCAGAAGTAACAGTTTaGCACAGATTTCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: HSCDISCTPETCTCYSNFAEVTV*HRFLQL
Trigger: CAGTTGGAGAAATCTGTGCAAAACTGTTACTTCTGC...GAAATTGGAATAGCAGGTACACGTCTCAGGTGTGCAAGAAATATCACAAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp TTTCCAGATTTCAGGTTTTACTTTGTCTTTACATCCCAGACTCAGAGAGAATCTAGGTGTGGAATCCTTTaGTCCACTTACTTTCCTTAC +
Preference number: 5 (lower is better)
Translates to: FPDFRFYFVFTSQTQRESRCGIL*STYFPY
Trigger: GTAAGGAAAGTAAGTGGACAAAAGGATTCCACACCT...AGATTCTCTCTGAGTCTGGGATGTAAAGACAAAGTAAAACCTGAAATCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS-3UTR CAA 90 bp GAAAAGATGCTTCCTGTTAATGACCAAAAACACTTTGGATTCCAAACGATCATTCAGAAAGTAAGTTGCTaGGCTTTCATGACCACAGTT +
Preference number: 5 (lower is better)
Translates to: EKMLPVNDQKHFGFQTIIQKVSC*AFMTTV
Trigger: AACTGTGGTCATGAAAGCCAAGCAACTTACTTTCTG...AATGATCGTTTGGAATCCAAAGTGTTTTTGGTCATTAACAGGAAGCATCTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000643932.2
CDS TCA 72 bp GGTAGGAGTTCAGGCCTGGGCGACTCCGGGCTGCGCTaGACCGGCGATAACCAGGCCCCGCGGCGGCGGCCT +
Preference number: 6 (lower is better)
Translates to: GRSSGLGDSGLR*TGDNQAPRRRP
Trigger: AGGCCGCCGCCGCGGGGCCTGGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377991.9
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp GCGCAGGCCGGGGCGCCGAGGTCGGGACAGGGTCAGTaGAGCGGCTGCCGCCTTCTTTCCACTGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: AQAGAPRSGQGQ*SGCRLLSTACS
Trigger: GCTGCAGGCAGTGGAAAGAAGGCGGCAGCCGCTGCACTGACCCTGTCCCGACCTCGGCGCCCCGGCCTGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS GCA 72 bp GGCTGGGTAGGAGTTCAGGCCTGGGCGACTCCGGGCTaGGCTGAACCGGCGATAACCAGGCCCCGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: GWVGVQAWATPG*AEPAITRPRGG
Trigger: GCCGCCGCGGGGCCTGGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTACCCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000650015.1
CDS CCA 72 bp GAGGTTCCCGCGGCTCAGGGAAGATGGCGGCAGCCGTaGTGCTGGCTGCTGGGTTGCGCGCGGCGCGCAGAG +
Preference number: 6 (lower is better)
Translates to: EVPAAQGRWRQP*CWLLGCARRAE
Trigger: CTCTGCGCGCCGCGCGCAACCCAGCAGCCAGCACCACGGCTGCCGCCATCTTCCCTGAGCCGCGGGAACCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS CCA 72 bp GGGCGGGGGCCGGGGACCTGGGTAGGAGTTCAGGCCTaGGCGACTCCGGGCTGCGCTGAACCGGCGATAACC +
Preference number: 6 (lower is better)
Translates to: GRGPGTWVGVQA*ATPGCAEPAIT
Trigger: GGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTACCCAGGTCCCCGGCCCCCGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439587.6
ENST00000643932.2
CDS CAA 72 bp GACAGGAAGGTGCGCATCCGCACCTCGGCCGTCGCGTaGCGGCACCGCACGAACCGAGGCCCCACCCCGCAC +
Preference number: 6 (lower is better)
Translates to: DRKVRIRTSAVA*RHRTNRGPTPH
Trigger: GTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp AGCTCGTTGCGCAGAGTCGGGCGCACTGGCCAGCAGTaGTCGGGTGGGGACGTGGTCCCAGGCCCCTCCGCA +
Preference number: 6 (lower is better)
Translates to: SSLRRVGRTGQQ*SGGDVVPGPSA
Trigger: TGCGGAGGGGCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000490199.2
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp ACAGGAAGGTGCGCATCCGCACCTCGGCCGTCGCGTTaGGGCACCGCACGAACCGAGGCCCCACCCCGCACA +
Preference number: 6 (lower is better)
Translates to: TGRCASAPRPSR*GTARTEAPPRT
Trigger: TGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCAACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp AGGGCCCGCAGTCGTCCACGCATGGGGACAGGAAGGTaGGCATCCGCACCTCGGCCGTCGCGTTGCGGCACC +
Preference number: 6 (lower is better)
Translates to: RARSRPRMGTGR*ASAPRPSRCGT
Trigger: GGTGCCGCAACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp ACCTGGGTAGGAGTTCAGGCCTGGGCGACTCCGGGCTaGGCTGAACCGGCGATAACCAGGCCCCGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: TWVGVQAWATPG*AEPAITRPRGG
Trigger: GCCGCCGCGGGGCCTGGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTACCCAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439587.6
ENST00000643932.2
CDS CCA 72 bp TGGGACAGGGCCTGGGCTGGGATTTGTGACAGGGGGTaGAACGAGGGCCGAGGCCGGGATGGGGGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: WDRAWAGICDRG*NEGRGRDGGQA
Trigger: GGCCTGGCCCCCATCCCGGCCTCGGCCCTCGTTCCACCCCCTGTCACAAATCCCAGCCCAGGCCCTGTCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377988.6
ENST00000473947.1
ENST00000643932.2
CDS TCA 72 bp AGGTCGAACTGGTGGCTCCGGAGAACGAGCTGGTGCTaGTTCCCGCCCTGCGCAGGCCGGGGCGCCGAGGTC +
Preference number: 6 (lower is better)
Translates to: RSNWWLRRTSWC*FPPCAGRGAEV
Trigger: GACCTCGGCGCCCCGGCCTGCGCAGGGCGGGAATCAGCACCAGCTCGTTCTCCGGAGCCACCAGTTCGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS TCA 72 bp CTCCTGGGCCCACGAGGCCCAGCTCCTCCTGCTCGTTaGTGCATAGCTGGTAACCACAGCCCCGGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: LLGPRGPAPPAR*CIAGNHSPGPG
Trigger: CCCGGGCCCGGGGCTGTGGTTACCAGCTATGCATCAACGAGCAGGAGGAGCTGGGCCTCGTGGGCCCAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp GAAGGTGTCCAGCTCGTTGCGCAGAGTCGGGCGCACTaGCCAGCAGTGCTCGGGTGGGGACGTGGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: EGVQLVAQSRAH*PAVLGWGRGPR
Trigger: CCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000490199.2
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp CTTGCACTGGCCGTAGGGCCCGCAGTCGTCCACGCATaGGGACAGGAAGGTGCGCATCCGCACCTCGGCCGT +
Preference number: 6 (lower is better)
Translates to: LALAVGPAVVHA*GQEGAHPHLGR
Trigger: ACGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp GGACGCCTCCACTGTCCAGCACTGGCAACAGCCTCATaGCGAACACGGCTGGGCGCTCAGGGGGAAGGGCCA +
Preference number: 6 (lower is better)
Translates to: GRLHCPALATAS*RTRLGAQGEGP
Trigger: TGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGAGGCGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000490199.2
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp GCGGAGGGCCAGGAACCAGGTCCCCGTCTGCGGGAATaGGATTCGCAGCCTGGCAACCCTGGTGGTGGCACT +
Preference number: 6 (lower is better)
Translates to: AEGQEPGPRLRE*DSQPGNPGGGT
Trigger: AGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATTCCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000473947.1
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp TGCCAGGGCACAAGTAGAAAAGCCAGCGGCGCCACGTaGGTGGGTAGCAGTGCCGGCGGCGGACGCTGCGTA +
Preference number: 6 (lower is better)
Translates to: CQGTSRKASGAT*VGSSAGGGRCV
Trigger: TACGCAGCGTCCGCCGCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGCTTTTCTACTTGTGCCCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp GAGCTCCAGGCTGAGGACGCCTCCACTGTCCAGCACTaGCAACAGCCTCATGGCGAACACGGCTGGGCGCTC +
Preference number: 6 (lower is better)
Translates to: ELQAEDASTVQH*QQPHGEHGWAL
Trigger: GAGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGACAGTGGAGGCGTCCTCAGCCTGGAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000490199.2
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp AGGGCACAAGTAGAAAAGCCAGCGGCGCCACGTGGGTaGGTAGCAGTGCCGGCGGCGGACGCTGCGTACTGT +
Preference number: 6 (lower is better)
Translates to: RAQVEKPAAPRG*VAVPAADAAYC
Trigger: ACAGTACGCAGCGTCCGCCGCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGCTTTTCTACTTGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp TCCTCCAGATCATGGCCTCTGACCCACTGGGTGACCTaGTGGCCTTTAGCCATGCCCCGCCCCAGCCACCCT +
Preference number: 6 (lower is better)
Translates to: SSRSWPLTHWVT*WPLAMPRPSHP
Trigger: AGGGTGGCTGGGGCGGGGCATGGCTAAAGGCCAGCAGGTCACCCAGTGGGTCAGAGGCCATGATCTGGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464519.6
ENST00000473947.1
CDS CCA 72 bp CCGGGCTGTGGGCACTCTTGCAACCGCACACACAGCTaGAAGCGGATGGTCCTACCAGGGCCCCGGGATGAT +
Preference number: 6 (lower is better)
Translates to: PGCGHSCNRTHS*KRMVLPGPRDD
Trigger: ATCATCCCGGGGCCCTGGTAGGACCATCCGCTTCCAGCTGTGTGTGCGGTTGCAAGAGTGCCCACAGCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000464519.6
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp GTCCAGCACTGGCAACAGCCTCATGGCGAACACGGCTaGGCGCTCAGGGGGAAGGGCCACACTTGGGCCAAA +
Preference number: 6 (lower is better)
Translates to: VQHWQQPHGEHG*ALRGKGHTWAK
Trigger: TTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGGCTGTTGCCAGTGCTGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000490199.2
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp CCTGGCGCACGGAGCTCTGGACCCAGCATGTCCTCCTaGGGCTGCCAAGTTGCCTCCTCCAGATCATGGCCT +
Preference number: 6 (lower is better)
Translates to: PGARSSGPSMSS*GCQVASSRSWP
Trigger: AGGCCATGATCTGGAGGAGGCAACTTGGCAGCCCCAGGAGGACATGCTGGGTCCAGAGCTCCGTGCGCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473947.1
CDS CAA 72 bp GGCCGGGCTGTGGGCACTTTGTACAGGGCTGAGCGATaGTGTGGGGAGAGGGTTTGCTCTGAGGGCCGGCCA +
Preference number: 6 (lower is better)
Translates to: GRAVGTLYRAER*CGERVCSEGRP
Trigger: TGGCCGGCCCTCAGAGCAAACCCTCTCCCCACACAATCGCTCAGCCCTGTACAAAGTGCCCACAGCCCGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490199.2
CDS CAA 90 bp TCCAGCTGGCATCCTGAGGCACCTCCACAGGCCACAGAGCTTGAGTaGTGCAGGGGTGGGGCTTTGGGACGCAGACGCAGTGACAGGGGG +
Preference number: 6 (lower is better)
Translates to: SSWHPEAPPQATELE*CRGGALGRRRSDRG
Trigger: CCCCCTGTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGCACAACTCAAGCTCTGTGGCCTGTGGAGGTGCCTCAGGATGCCAGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000464519.6
ENST00000643932.2
ENST00000650015.1
CDS TCA 72 bp CAGCTGGAAGCGGATGGTCCTACCAGGGCCCCGGGATaGTGTTTCCACACGCACGTAGACCCAGTGCCCCCA +
Preference number: 6 (lower is better)
Translates to: QLEADGPTRAPG*CFHTHVDPVPP
Trigger: TGGGGGCACTGGGTCTACGTGCGTGTGGAAACATCATCCCGGGGCCCTGGTAGGACCATCCGCTTCCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000464519.6
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp CCTGAGGCACCTCCACAGGCCACAGAGCTTGAGTTGTaGAGGGGTGGGGCTTTGGGACGCAGACGCAGTGAC +
Preference number: 6 (lower is better)
Translates to: PEAPPQATELEL*RGGALGRRRSD
Trigger: GTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGCACAACTCAAGCTCTGTGGCCTGTGGAGGTGCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000464519.6
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp CCAGACTTGAGTCTAGGCTGGGTAGGAGTTCAGGCCTaGGCGACTCCGGGCTGCGCTGAACCGGCGATAACC +
Preference number: 6 (lower is better)
Translates to: PDLSLGWVGVQA*ATPGCAEPAIT
Trigger: GGTTATCGCCGGTTCAGCGCAGCCCGGAGTCGCCCAGGCCTGAACTCCTACCCAGCCTAGACTCAAGTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377991.9
ENST00000650015.1
CDS CAA 90 bp CCAGCTCCAGCTGGCATCCTGAGGCACCTCCACAGGCCACAGAGCTaGAGTTGTGCAGGGGTGGGGCTTTGGGACGCAGACGCAGTGACA +
Preference number: 6 (lower is better)
Translates to: PAPAGILRHLHRPQS*SCAGVGLWDADAVT
Trigger: TGTCACTGCGTCTGCGTCCCAAAGCCCCACCCCTGCACAACTCAAGCTCTGTGGCCTGTGGAGGTGCCTCAGGATGCCAGCTGGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000464519.6
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp CCTCCAAAGTGGCTGCAGAGGCAATGGGGTGAATCGTaGTCAGAGGCGCGCTCCAATGGGGTAGCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: PPKWLQRQWGES*SEARSNGVAGL
Trigger: GAGCCCTGCTACCCCATTGGAGCGCGCCTCTGAGCACGATTCACCCCATTGCCTCTGCAGCCACTTTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS GCA 72 bp CTCTGGACCCAGCATGTCCTCCTGGGGCTGCCAAGTTaGCTCCTCCAGATCATGGCCTCTGACCCACTGGGT +
Preference number: 6 (lower is better)
Translates to: LWTQHVLLGLPS*LLQIMASDPLG
Trigger: ACCCAGTGGGTCAGAGGCCATGATCTGGAGGAGGCAACTTGGCAGCCCCAGGAGGACATGCTGGGTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473947.1
CDS GCA 72 bp AGGCTGCGTACAGATAATTGTGTGTGCGCAGCAGCTTaGACTGGCCGTAGGGCCCGCAGTCGTCCACGCATG +
Preference number: 6 (lower is better)
Translates to: RLRTDNCVCAAA*TGRRARSRPRM
Trigger: CATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp CCTTGCACTCGCAGGCTGCGTACAGATAATTGTGTGTaGGCAGCAGCTTGCACTGGCCGTAGGGCCCGCAGT +
Preference number: 6 (lower is better)
Translates to: PCTRRLRTDNCV*AAACTGRRARS
Trigger: ACTGCGGGCCCTACGGCCAGTGCAAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp GAAAAGAGCCCGCCTCCAAAGTGGCTGCAGAGGCAATaGGGTGAATCGTGCTCAGAGGCGCGCTCCAATGGG +
Preference number: 6 (lower is better)
Translates to: EKSPPPKWLQRQ*GESCSEARSNG
Trigger: CCCATTGGAGCGCGCCTCTGAGCACGATTCACCCCATTGCCTCTGCAGCCACTTTGGAGGCGGGCTCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS CCA 72 bp GGCACTCTTGCAACCGCACACACAGCTGGAAGCGGATaGTCCTACCAGGGCCCCGGGATGATGTTTCCACAC +
Preference number: 6 (lower is better)
Translates to: GTLATAHTAGSG*SYQGPGMMFPH
Trigger: GTGTGGAAACATCATCCCGGGGCCCTGGTAGGACCATCCGCTTCCAGCTGTGTGTGCGGTTGCAAGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000464519.6
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp ACTCATCCTGGAGACCCTGGACCCAGCATGTCCTCCTaGGGCTGCCAAGTTGCCTCCTCCAGATCATGGCCT +
Preference number: 6 (lower is better)
Translates to: THPGDPGPSMSS*GCQVASSRSWP
Trigger: AGGCCATGATCTGGAGGAGGCAACTTGGCAGCCCCAGGAGGACATGCTGGGTCCAGGGTCTCCAGGATGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464519.6
CDS CCA 72 bp TCCAGGCTGTGGCCAAGATCCCCAGGGCGAAGAGACTaGGTCCAAGCAGGTTCCAGAGTCCATGTCGGTCAA +
Preference number: 6 (lower is better)
Translates to: SRLWPRSPGRRD*VQAGSRVHVGQ
Trigger: TTGACCGACATGGACTCTGGAACCTGCTTGGACCCAGTCTCTTCGCCCTGGGGATCTTGGCCACAGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS CAA 72 bp AAGCTGGGCACAAAGACCTTGTACAGGGCTGAGCGATaGTGTGGGGAGAGGGTTTGCTCTGAGGGCCGGCCA +
Preference number: 6 (lower is better)
Translates to: KLGTKTLYRAER*CGERVCSEGRP
Trigger: TGGCCGGCCCTCAGAGCAAACCCTCTCCCCACACAATCGCTCAGCCCTGTACAAGGTCTTTGTGCCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000464519.6
ENST00000643932.2
ENST00000650015.1
CDS CAA 72 bp CGAACACGGCTGGGCGCTCAGGGGGAAGGGCCACACTaGGGCCAAAGAAGATGTAGAAGTGGACAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: RTRLGAQGEGPH*GQRRCRSGQRR
Trigger: CCTTCTCTGTCCACTTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000490199.2
ENST00000643932.2
ENST00000650015.1
CDS CAA 72 bp CGAATGGCCAGGACCACAGGTGGCAGAAACATGAGGTaGCTCAGGCAGAGCAGGAGTGTGGACAGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: RMARTTGGRNMR*LRQSRSVDSSW
Trigger: CCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGTCCTGGCCATTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000377996.5
ENST00000439587.6
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp GCCAATGAGATGAAAAGAGCCCGCCTCCAAAGTGGCTaGAGAGGCAATGGGGTGAATCGTGCTCAGAGGCGC +
Preference number: 6 (lower is better)
Translates to: ANEMKRARLQSG*RGNGVNRAQRR
Trigger: GCGCCTCTGAGCACGATTCACCCCATTGCCTCTGCAGCCACTTTGGAGGCGGGCTCTTTTCATCTCATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS CCA 72 bp TGTCCTCAGGAACATGGAAGTGGAAGAGCTCGGTGCTaGCAAAGGAGCGGAAAGGACTCAGCTTGCGGGGTG +
Preference number: 6 (lower is better)
Translates to: CPQEHGSGRARC*QRSGKDSACGV
Trigger: CACCCCGCAAGCTGAGTCCTTTCCGCTCCTTTGCCAGCACCGAGCTCTTCCACTTCCATGTTCCTGAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000439587.6
ENST00000473947.1
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp GGTCCAAGCAGGTTCCAGAGTCCATGTCGGTCAAGCTaGAGAGCCATGGACAGCAGCATAGCTCCCAGCAAA +
Preference number: 6 (lower is better)
Translates to: GPSRFQSPCRSS*RAMDSSIAPSK
Trigger: TTTGCTGGGAGCTATGCTGCTGTCCATGGCTCTGCAGCTTGACCGACATGGACTCTGGAACCTGCTTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS TCA 72 bp GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTCCAGGCTCCATTAATCCTTCC +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPVSPGSINPS
Trigger: GGAAGGATTAATGGAGCCTGGAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS GCA 72 bp CAGGAAATGAGCTTTCTCTTCTTGGAGCCAGTGCTCTaGCCTCCTCAGGCTTCTGGCCTCCTAATGAGCACT +
Preference number: 6 (lower is better)
Translates to: QEMSFLFLEPVL*PPQASGLLMST
Trigger: AGTGCTCATTAGGAGGCCAGAAGCCTGAGGAGGGCAGAGCACTGGCTCCAAGAAGAGAAAGCTCATTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377996.5
CDS CCA 72 bp CAAACAGCCAGGAATGTGTCCTCAGGAACATGGAAGTaGAAGAGCTCGGTGCTGGCAAAGGAGCGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: QTARNVSSGTWK*KSSVLAKERKG
Trigger: TCCTTTCCGCTCCTTTGCCAGCACCGAGCTCTTCCACTTCCATGTTCCTGAGGACACATTCCTGGCTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000439587.6
ENST00000473947.1
ENST00000643932.2
ENST00000650015.1
CDS GCA 72 bp GGTCTCCACAAAAGCATAAAGCAGGACGGCACTGCCTaGAATAAGGCTGCCAGGGCACAAGTAGAAAAGCCA +
Preference number: 6 (lower is better)
Translates to: GLHKSIKQDGTA*NKAARAQVEKP
Trigger: TGGCTTTTCTACTTGTGCCCTGGCAGCCTTATTGCAGGCAGTGCCGTCCTGCTTTATGCTTTTGTGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp CACATCGTAGTCCATGATGCAGAAAACCACGATGCCTaGCTGGTCACAGGCATGATAGAACGTGGAGAAGAA +
Preference number: 6 (lower is better)
Translates to: HIVVHDAENHDA*LVTGMIERGEE
Trigger: TTCTTCTCCACGTTCTATCATGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCATCATGGACTACGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377988.6
ENST00000377991.9
ENST00000643932.2
ENST00000650015.1
CDS CCA 72 bp TCTTACAAAAATGACCATTATCTATGCATGACAGTTTaGGAAGCACTGCTGTCTCTGTCTGTAGAAGACACA +
Preference number: 6 (lower is better)
Translates to: SYKNDHYLCMTV*EALLSLSVEDT
Trigger: TGTGTCTTCTACAGACAGAGACAGCAGTGCTTCCCAAACTGTCATGCATAGATAATGGTCATTTTTGTAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377996.5
ENST00000439587.6
CDS TCA 72 bp AGTTTTGTTCATTTACTCCAATGTGTCTTACAAAAATaGCCATTATCTATGCATGACAGTTTGGGAAGCACT +
Preference number: 6 (lower is better)
Translates to: SFVHLLQCVLQK*PLSMHDSLGST
Trigger: AGTGCTTCCCAAACTGTCATGCATAGATAATGGTCATTTTTGTAAGACACATTGGAGTAAATGAACAAAACT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377996.5
ENST00000439587.6