Pregenerated sensors for TMEM88 (Homo sapiens)
Ensembl gene IDs: ENSG00000167874Ensembl transcript IDs: ENST00000301599.7, ENST00000574668.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCTGAGGGGGAGGTGTGCAGGTTCCAGCCTAGATGTTCAGGATTaGGATGTGGGTCGTGAAAGGAAAGTGGGTTTTCCGGGATGTGGG | + |
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Preference number: 1 (lower is better) Translates to: ELRGRCAGSSLDVQD*DVGRERKVGFPGCG Trigger: CCCACATCCCGGAAAACCCACTTTCCTTTCACGACCCACATCTCAATCCTGAACATCTAGGCTGGAACCTGCACACCTCCCCCTCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| 3UTR-3UTR CAA 90 bp | CGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGTGCACCGGGCTTCAAGTCCTaGGGCCGAATAAGAGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: RGHEIVVPFTTELRGRCAPGFKS*GRIRGR Trigger: CCTCCCTCTTATTCGGCCCAAGGACTTGAAGCCCGG...TGCACACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| 3UTR TCA 72 bp | GGGAGGTGTGCAGGTTCCAGCCTAGATGTTCAGGATTaGGATGTGGGTCGTGAAAGGAAAGTGGGTTTTCCG | + |
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Preference number: 3 (lower is better) Translates to: GRCAGSSLDVQD*DVGRERKVGFP Trigger: CGGAAAACCCACTTTCCTTTCACGACCCACATCTCAATCCTGAACATCTAGGCTGGAACCTGCACACCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR CCA 90 bp | GGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGTGCAGGTGGGGTCCCGGGGCTCTaGGCCGTCACCAGGAACCGC | + |
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Preference number: 4 (lower is better) Translates to: GHEIVVPFTTELRGRCAGGVPGL*AVTRNR Trigger: GCGGTTCCTGGTGACGGCCCAGAGCCCCGGGACCCC...ACCTGCACACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR GCA 90 bp | AAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGCCCGCAGGTGCGCGGTaGAAGGGGGTGCCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KTRARDCCPIHDGAEGEVPAGAR*KGVPGS Trigger: GCTCCCAGGCACCCCCTTGCACCGCGCACCTGCGGG...CACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR TCA 90 bp | GGTGGGGGCAGGGCAGGTCGGAAGATGCCGGGCTTCAAGTCCTTGGGCCGAATAGACCCAGACCTTTCCTaGTGTGGGAACGGCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: GGGRAGRKMPGFKSLGRIDPDLS*CGNGLG Trigger: TCCCAGGCCGTTCCCACATCAGGAAAGGTCTGGGTC...TATTCGGCCCAAGGACTTGAAGCCCGGCATCTTCCGACCTGCCCTGCCCCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR CCA 90 bp | ACTGACGCTGCTGCTCCCAAGGGGATGCTAGGACTCCGCTCAGGCAGGGGTGGGAGACCTTTCCTGATGTaGGAACGGCCTGGGACCCTG | + |
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Preference number: 4 (lower is better) Translates to: TDAAAPKGMLGLRSGRGGRPFLM*ERPGTL Trigger: CAGGGTCCCAGGCCGTTCCCACATCAGGAAAGGTCT...CCCACCCCTGCCTGAGCGGAGTCCTAGCATCCCCTTGGGAGCAGCAGCGTCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR TCA 90 bp | AGGGCAGGTCGGAAGATGCCGGGCTTCAAGTCCTTGGGCCGAATAAGAGGGAGGTGGGAGCGCAGGAACTaGGAGTGGCAGAGGAAGCCG | + |
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Preference number: 4 (lower is better) Translates to: RAGRKMPGFKSLGRIRGRWERRN*EWQRKP Trigger: CGGCTTCCTCTGCCACTCTCAGTTCCTGCGCTCCCA...CCTCCCTCTTATTCGGCCCAAGGACTTGAAGCCCGGCATCTTCCGACCTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR TCA 90 bp | TGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGCCTGGGACCCTGGTaGGGCCCGGATTTGCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: CTIKRGHEIVVPFTTELRGLGPW*GPDLPR Trigger: CCGCGGCAAATCCGGGCCTCACCAGGGTCCCAGGCC...CCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR CCA 90 bp | GCTGAGGGGGAGGTGTGCAGGTTCCAGCCTAGATGTTCAGGATTGAGATGTGGGGATGTGGGAACGGCCTaGGACCCTGGTGAGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: AEGEVCRFQPRCSGLRCGDVGTA*DPGEAR Trigger: CCGGGCCTCACCAGGGTCCCAGGCCGTTCCCACATC...CCCACATCTCAATCCTGAACATCTAGGCTGGAACCTGCACACCTCCCCCTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR TCA 90 bp | GGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGTGCAGGTCGAAGCCCAGCATGGTaGCAGCGGGTAGCAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: GHEIVVPFTTELRGRCAGRSPAW*QRVARW Trigger: CCATCTTGCTACCCGCTGTCACCATGCTGGGCTTCG...ACCTGCACACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR GCA 90 bp | CATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGCGCGGTGCAAGGGGGTaGCTGGGAGCGCAGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: HKTRARDCCPIHDGAEGERGARG*LGAQEL Trigger: CAGTTCCTGCGCTCCCAGGCACCCCCTTGCACCGCG...CTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR GCA 90 bp | GGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGTGCAGGTGGGCAGGTCGGAAGATaGCGGGCTTCAAGTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GHEIVVPFTTELRGRCAGGQVGR*RASSPE Trigger: CTCAGGACTTGAAGCCCGGCATCTTCCGACCTGCCC...ACCTGCACACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000574668.1 |
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| CDS-3UTR CCA 90 bp | AAGCTGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGGGGTCCCGGGGCTCTaGGCCGTCACCAGGAACCGC | + |
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Preference number: 4 (lower is better) Translates to: KLHHKTRARDCCPIHDGAGVPGL*AVTRNR Trigger: GCGGTTCCTGGTGACGGCCCAGAGCCCCGGGACCCC...AGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR CCA 90 bp | CGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGTGCAGGTTCCAGAGAGGCGGCGGTAGCTaGCCAGAGCAAGCACGAGCA | + |
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Preference number: 4 (lower is better) Translates to: RDCCPIHDGAEGEVCRFQRGGGS*PEQARA Trigger: TGCTCGTGCTTGCTCTGGCCAGCTACCGCCGCCTCT...CTGGAACCTGCACACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR GCA 90 bp | GGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGTGCAGGTGCTGAGGGGGAGGTGTaGAGGTTCCAGCCTAGATGT | + |
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Preference number: 4 (lower is better) Translates to: GHEIVVPFTTELRGRCAGAEGEV*RFQPRC Trigger: ACATCTAGGCTGGAACCTGCACACCTCCCCCTCAGC...ACCTGCACACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR GCA 90 bp | TGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGAGGAACCGCTCGCTGTaGCCCGGGGACATCCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: CTIKRGHEIVVPFTTELRRNRSL*PGDIRH Trigger: ATGGCGGATGTCCCCGGGGCACAGCGAGCGGTTCCT...CCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR GCA 90 bp | ATTGAGATGTGGGTCGTGAAAGGAAAGTGGGTTTTCCGGGATGTGGGGGCTTTTAGGAACCGCTCGCTGTaGCCCGGGGACATCCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IEMWVVKGKWVFRDVGAFRNRSL*PGDIRH Trigger: ATGGCGGATGTCCCCGGGGCACAGCGAGCGGTTCCT...AAAAGCCCCCACATCCCGGAAAACCCACTTTCCTTTCACGACCCACATCTCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR TCA 90 bp | AAGCTGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTCGAAGCCCAGCATGGTaGCAGCGGGTAGCAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: KLHHKTRARDCCPIHDGARSPAW*QRVARW Trigger: CCATCTTGCTACCCGCTGTCACCATGCTGGGCTTCG...AGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR TCA 90 bp | AGGGCAGGTCGGAAGATGCCGGGCTTCAAGTCCTTGGGCCGAATAAGAGGGAGGCTAGATGTTCAGGATTaGGATGTGGGTCGTGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RAGRKMPGFKSLGRIRGRLDVQD*DVGRER Trigger: CCTTTCACGACCCACATCTCAATCCTGAACATCTAG...CCTCCCTCTTATTCGGCCCAAGGACTTGAAGCCCGGCATCTTCCGACCTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR TCA 90 bp | CGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGTGCACTAGATGTTCAGGATTaGGATGTGGGTCGTGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RGHEIVVPFTTELRGRCALDVQD*DVGRER Trigger: CCTTTCACGACCCACATCTCAATCCTGAACATCTAG...TGCACACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR GCA 90 bp | AAGCTGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGGGCAGGTCGGAAGATaGCGGGCTTCAAGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KLHHKTRARDCCPIHDGAGQVGR*RASSPW Trigger: CCAAGGACTTGAAGCCCGGCATCTTCCGACCTGCCC...AGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR CCA 90 bp | AGCTGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGCAGCGGGTAGCAAGATaGTCCCTAGCACCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: SCTIKRGHEIVVPFTTELQRVAR*SLAPAP Trigger: TGGTGCTGGTGCTAGGGACCATCTTGCTACCCGCTG...CAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR CCA 90 bp | GGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGTGCAGGTTTCAGGATTGAGATGTaGGTCGTGAAAGGAAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GHEIVVPFTTELRGRCAGFRIEM*VVKGKW Trigger: CCACTTTCCTTTCACGACCCACATCTCAATCCTGAA...ACCTGCACACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR CCA 90 bp | TGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGCCACCAGCAGATTCTaGGCTGTTACAAGAACAGCG | + |
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Preference number: 4 (lower is better) Translates to: CTIKRGHEIVVPFTTELRATSRF*AVTRTA Trigger: CGCTGTTCTTGTAACAGCCCAGAATCTGCTGGTGGC...CCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR CCA 90 bp | AGCTGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGGCCACCAGCAGATTCTaGGCTGTTACAAGAACAGCG | + |
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Preference number: 4 (lower is better) Translates to: SCTIKRGHEIVVPFTTELATSRF*AVTRTA Trigger: CGCTGTTCTTGTAACAGCCCAGAATCTGCTGGTGGC...CAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR CCA 90 bp | AAGCTGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGTCGTGAAAGGAAAGTaGGTTTTCCGGGATGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KLHHKTRARDCCPIHDGAVVKGK*VFRDVG Trigger: CCCCACATCCCGGAAAACCCACTTTCCTTTCACGAC...AGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR CCA 90 bp | CATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGATCTTTATTGATGCGTaGACACTCCTTCCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HKTRARDCCPIHDGAEGEIFIDA*TLLPLQ Trigger: CTGGAGGGGAAGGAGTGTCCACGCATCAATAAAGAT...CTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR GCA 90 bp | ATACTAGAGAAGCTGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGCTGAGGGGGAGGTGTaGAGGTTCCAGCCTAGATGT | + |
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Preference number: 4 (lower is better) Translates to: ILEKLHHKTRARDCCPIHAEGEV*RFQPRC Trigger: ACATCTAGGCTGGAACCTGCACACCTCCCCCTCAGC...GTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCAGCTTCTCTAGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR CCA 90 bp | ATTGAGATGTGGGTCGTGAAAGGAAAGTGGGTTTTCCGGGATGTGGGGGCTTTTGTCGTGAAAGGAAAGTaGGTTTTCCGGGATGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: IEMWVVKGKWVFRDVGAFVVKGK*VFRDVG Trigger: CCCCACATCCCGGAAAACCCACTTTCCTTTCACGAC...AAAAGCCCCCACATCCCGGAAAACCCACTTTCCTTTCACGACCCACATCTCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR CCA 90 bp | AGCTGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGTTCAGGATTGAGATGTaGGTCGTGAAAGGAAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SCTIKRGHEIVVPFTTELFRIEM*VVKGKW Trigger: CCACTTTCCTTTCACGACCCACATCTCAATCCTGAA...CAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR TCA 90 bp | ATTGAGATGTGGGTCGTGAAAGGAAAGTGGGTTTTCCGGGATGTGGGGGCTTTTTCGTTAAATCTTTATTaGTGCGTGGACACTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: IEMWVVKGKWVFRDVGAFSLNLY*CVDTPS Trigger: GGAAGGAGTGTCCACGCATCAATAAAGATTTAACGA...AAAAGCCCCCACATCCCGGAAAACCCACTTTCCTTTCACGACCCACATCTCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR CAA 90 bp | ACTGACGCTGCTGCTCCCAAGGGGATGCTAGGACTCCGCTCAGGCAGGGGTGGGAACGAGGGCACGAGATaGTTGTCCCATTCACGACGG | + |
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Preference number: 5 (lower is better) Translates to: TDAAAPKGMLGLRSGRGGNEGTR*LSHSRR Trigger: CCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTT...CCCACCCCTGCCTGAGCGGAGTCCTAGCATCCCCTTGGGAGCAGCAGCGTCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS TCA 90 bp | AGCGCAGGAACTGAGAGTGGCAGAGGAAGCCGAAGCCCAGCATGGTaGCAGCGGGTAGCAAGATGGTCCCTAGCACCAGCACCAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SAGTESGRGSRSPAW*QRVARWSLAPAPAG Trigger: TCCTGCTGGTGCTGGTGCTAGGGACCATCTTGCTACCCGCTGTCACCATGCTGGGCTTCGGCTTCCTCTGCCACTCTCAGTTCCTGCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR CAA 90 bp | GGGGGCAGGGCAGGTCGGAAGATGCCGGGCTTCAAGTCCTTGGGCCGAATAAGAGAGGGCACGAGATTGTaGTCCCATTCACGACGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GGRAGRKMPGFKSLGRIREGTRL*SHSRRS Trigger: GCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTC...TCTTATTCGGCCCAAGGACTTGAAGCCCGGCATCTTCCGACCTGCCCTGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS TCA 90 bp | GCTTCAAGTCCTGAGAGTGGCAGAGGAAGCCGAAGCCCAGCATGGTaGCAGCGGGTAGCAAGATGGTCCCTAGCACCAGCACCAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: ASSPESGRGSRSPAW*QRVARWSLAPAPAG Trigger: TCCTGCTGGTGCTGGTGCTAGGGACCATCTTGCTACCCGCTGTCACCATGCTGGGCTTCGGCTTCCTCTGCCACTCTCAGGACTTGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574668.1 |
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| CDS CCA 90 bp | GTTGTTCTTGACTCGAGGGTCATTAGACCCAGACCTTTCCTGATGTaGGAACGGCCTGGGACCCTGGTGAGGCCCGGATTTGCCGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: VVLDSRVIRPRPFLM*ERPGTLVRPGFAAA Trigger: AGCCGCGGCAAATCCGGGCCTCACCAGGGTCCCAGGCCGTTCCCACATCAGGAAAGGTCTGGGTCTAATGACCCTCGAGTCAAGAACAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR CAA 90 bp | CATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGGGCAGCCGTCAGGGTaGTTCTTGACTCGAGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: HKTRARDCCPIHDGAEGEGQPSG*FLTRGS Trigger: TGACCCTCGAGTCAAGAACAACCCTGACGGCTGCCC...CTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR CAA 90 bp | AAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGGAGGGCACGAGATTGTaGTCCCATTCACGACGGAGC | + |
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Preference number: 5 (lower is better) Translates to: KTRARDCCPIHDGAEGEVEGTRL*SHSRRS Trigger: GCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTC...CACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR CAA 90 bp | CGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGTGCAGGTTCCAGAACGAGGGCACGAGATaGTTGTCCCATTCACGACGG | + |
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Preference number: 5 (lower is better) Translates to: RDCCPIHDGAEGEVCRFQNEGTR*LSHSRR Trigger: CCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTT...CTGGAACCTGCACACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301599.7 ENST00000574668.1 |
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| CDS-3UTR CAA 90 bp | CACGAGATTGTTGTCCCATTCACGACGGAGCTGAGGGGGAGGTGTGCAGGTTCCCCGTCAGGGTTGTTCTaGACTCGAGGGTCATTAGAC | + |
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Preference number: 5 (lower is better) Translates to: HEIVVPFTTELRGRCAGSPSGLF*TRGSLD Trigger: GTCTAATGACCCTCGAGTCAAGAACAACCCTGACGG...GGAACCTGCACACCTCCCCCTCAGCTCCGTCGTGAATGGGACAACAATCTCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR CAA 90 bp | AAGCTGCACCATAAAACGAGGGCACGAGATTGTTGTCCCATTCACGACGGAGCTCCGGGCTTCAAGTCCTaGGGCCGAATAAGAGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: KLHHKTRARDCCPIHDGAPGFKS*GRIRGR Trigger: CCTCCCTCTTATTCGGCCCAAGGACTTGAAGCCCGG...AGCTCCGTCGTGAATGGGACAACAATCTCGTGCCCTCGTTTTATGGTGCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS-3UTR CAA 90 bp | TTCAGGATTGAGATGTGGGTCGTGAAAGGAAAGTGGGTTTTCCGGGATGTGGGGTTCGTTAAATCTTTATaGATGCGTGGACACTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FRIEMWVVKGKWVFRDVGFVKSL*MRGHSF Trigger: GAAGGAGTGTCCACGCATCAATAAAGATTTAACGAA...CCCCACATCCCGGAAAACCCACTTTCCTTTCACGACCCACATCTCAATCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS GCA 72 bp | GTGACCAGTAGGGCCGTGAAACCGGGGTCCCGCAGGTaGGCGGTGCAAGGGGGTGCCTGGGAGCGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: VTSRAVKPGSRR*AVQGGAWERRN Trigger: GTTCCTGCGCTCCCAGGCACCCCCTTGCACCGCGCACCTGCGGGACCCCGGTTTCACGGCCCTACTGGTCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS GCA 72 bp | GAAACCGGGGTCCCGCAGGTGCGCGGTGCAAGGGGGTaGCTGGGAGCGCAGGAACTGAGAGTGGCAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: ETGVPQVRGARG*LGAQELRVAEE Trigger: TTCCTCTGCCACTCTCAGTTCCTGCGCTCCCAGGCACCCCCTTGCACCGCGCACCTGCGGGACCCCGGTTTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS TCA 72 bp | CCTGAGAGTGGCAGAGGAAGCCGAAGCCCAGCATGGTaGCAGCGGGTAGCAAGATGGTCCCTAGCACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PESGRGSRSPAW*QRVARWSLAPA Trigger: TGCTGGTGCTAGGGACCATCTTGCTACCCGCTGTCACCATGCTGGGCTTCGGCTTCCTCTGCCACTCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574668.1 |
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| CDS TCA 72 bp | ACTGAGAGTGGCAGAGGAAGCCGAAGCCCAGCATGGTaGCAGCGGGTAGCAAGATGGTCCCTAGCACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TESGRGSRSPAW*QRVARWSLAPA Trigger: TGCTGGTGCTAGGGACCATCTTGCTACCCGCTGTCACCATGCTGGGCTTCGGCTTCCTCTGCCACTCTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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| CDS CCA 72 bp | GACTCGAGGGTCATTAGACCCAGACCTTTCCTGATGTaGGAACGGCCTGGGACCCTGGTGAGGCCCGGATTT | + |
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Preference number: 6 (lower is better) Translates to: DSRVIRPRPFLM*ERPGTLVRPGF Trigger: AAATCCGGGCCTCACCAGGGTCCCAGGCCGTTCCCACATCAGGAAAGGTCTGGGTCTAATGACCCTCGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301599.7 |
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