Pregenerated sensors for TMEM82 (Homo sapiens)
Ensembl gene IDs: ENSG00000162460Ensembl transcript IDs: ENST00000375782.2, ENST00000465575.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAGGCAGGTCTGAGAGGCTGCATCATTGCCCACCCCAAGAAAAAGAGGGTTCAACTCCAGGCATCGCCCTaGGGTCAAGGCCTCGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: KAGLRGCIIAHPKKKRVQLQASP*GQGLGD Trigger: ATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAG...TTGAACCCTCTTTTTCTTGGGGTGGGCAATGATGCAGCCTCTCAGACCTGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGCAGGTCTGAGAGGCTGCATCATTGCCCACCCCAAGAAAAAGAGGGTTCAACCCATCCCCAAATCCTaGCTTCCCTTCTCGGGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KAGLRGCIIAHPKKKRVQPIPKS*LPFSGL Trigger: GAGCCCCGAGAAGGGAAGGCAGGATTTGGGGATGGG...TTGAACCCTCTTTTTCTTGGGGTGGGCAATGATGCAGCCTCTCAGACCTGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTAGGTTCAGCGTGCGGTaGGGGGCGCCCTCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLCLQASPWGQGLGDQARFSVR*GAPSCR Trigger: CCTGCAGGAGGGCGCCCCTCACCGCACGCTGAACCT...AGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGCTCTGCAGGCCGGGGTaGTGCCGCTGCTCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALPLCLQASPWGQGLGDQLCRPG*CRCSSC Trigger: GCAGGAGGAGCAGCGGCAGCACCCCGGCCTGCAGAG...CTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTGTCTGCACCTGGCTCTaGAGGCCGGGGTGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLCLQASPWGQGLGDQAVCTWL*RPGCCR Trigger: GCGGCAGCACCCCGGCCTGCAGAGCCAGGTGCAGAC...AGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGCCAGGCCCAGCAGCGTaGCCAGCCCGAGGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPLCLQASPWGQGLGDQPGPAA*PARGSA Trigger: TGCTGAGCCTCGGGCTGGCCACGCTGCTGGGCCTGG...CTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTCACCCTGGGAGCCCTTaGCCAGGGACAGCAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLCLQASPWGQGLGDQAHPGSP*PGTAAW Trigger: CCACGCTGCTGTCCCTGGGCAAGGGCTCCCAGGGTG...AGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTTCCAGGGAGGCCCACTaGGCCCGAAGCCGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLCLQASPWGQGLGDQASREAH*ARSRSF Trigger: AAAGGAGCGGCTTCGGGCCCAGTGGGCCTCCCTGGA...AGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTAGTGGGCCACGGCAAAGGCTATaGCCAGGGCACGGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLQASPWGQGLGDQASGPRQRL*PGHGPA Trigger: TGCTGGGCCGTGCCCTGGCCATAGCCTTTGCCGTGG...CCCACTAGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTAGTGGGGCCTGTGCTGAGCTCTaGGCAGGAGGCCAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLQASPWGQGLGDQASGACAEL*AGGQLC Trigger: GCAGAGCTGGCCTCCTGCCCAGAGCTCAGCACAGGC...CCCACTAGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTGGGCTGGCTTGGTGTTaGCACTGGAGGCCTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPLCLQASPWGQGLGDQAGLAWC*HWRPLG Trigger: TCCCAGAGGCCTCCAGTGTCAACACCAAGCCAGCCC...AGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGAGAGGTCAAGCAGGGTaGGGACGCCCACGAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: ALPLCLQASPWGQGLGDQRGQAG*GRPRDT Trigger: GGTGTCTCGTGGGCGTCCGCACCCTGCTTGACCTCT...CTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTCTCCAGGCATCGCCCTaGGGTCAAGGCCTCGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPLCLQASPWGQGLGDQALQASP*GQGLGD Trigger: ATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAG...AGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTAGTGGGAAACAGGGCCAGCCCTaGCAGGTGCACCGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCLQASPWGQGLGDQASGKQGQP*QVHRFQ Trigger: CTGGAAACGGTGCACCTGGCAGGGCTGGCCCTGTTT...CCCACTAGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTCACAGTAGCGCTGGCTaGTGTGCAGCTCGTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLCLQASPWGQGLGDQAHSSAG*CAARRG Trigger: GCCTCTACGAGCTGCACAGCAGCCAGCGCTACTGTG...AGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGATGAGGGCCACAGCTaGCAGGTCACCCACGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALPLCLQASPWGQGLGDQDEGHS*QVTHGK Trigger: TTTGCCGTGGGTGACCTGGCAGCTGTGGCCCTCATC...CTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTAGTGGGGTAGGGAGACAAGGATaGCCAGCAGGTCCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLQASPWGQGLGDQASGVGRQG*PAGPAS Trigger: GCTGGCTGGACCTGCTGGGCATCCTTGTCTCCCTAC...CCCACTAGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTCCCATCCCCAAATCCTaGCTTCCCTTCTCGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLCLQASPWGQGLGDQAPIPKS*LPFSGL Trigger: GAGCCCCGAGAAGGGAAGGCAGGATTTGGGGATGGG...AGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGCTCTCGGCGGCACCCTaGGAGCCCTTGCCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQLSAAP*EPLPRD Trigger: GTCCCTGGGCAAGGGCTCCCAGGGTGCCGCCGAGAG...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGTGTCCAGAACCGCATaGCCTCCGAGGTGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALPLCLQASPWGQGLGDQVSRTA*PPRWSG Trigger: TCCTGACCACCTCGGAGGCCATGCGGTTCTGGACAC...CTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGGAGGGGGCCGAACTCTaGGACTGGGGTGCCGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQEGAEL*DWGAEG Trigger: GCCCTCGGCACCCCAGTCCCAGAGTTCGGCCCCCTC...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGTGCAGGCCGGGGTGCTaGCGCTGCTCCTCCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQCRPGC*RCSSCM Trigger: CATGCAGGAGGAGCAGCGGCAGCACCCCGGCCTGCA...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGATGGAAGAGAGAACATaGCAGCCCCGGAAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALPLCLQASPWGQGLGDQMEERT*QPRKEP Trigger: GGGCTCCTTCCGGGGCTGCCATGTTCTCTCTTCCAT...CTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGCCAGGGACAGCAGCGTaGACACGGCCCGGAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQPGTAA*TRPGGR Trigger: TCTCCCTCCGGGCCGTGTCCACGCTGCTGTCCCTGG...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGAGCACCGTCTGCACCTaGCTCTGCAGGCCGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQSTVCT*LCRPGC Trigger: GCACCCCGGCCTGCAGAGCCAGGTGCAGACGGTGCT...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGCGAAGAGGCCGCCCATaGGCACCAGCACCGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQRRGRP*APAPSA Trigger: TGCAGACGGTGCTGGTGCGCATGGGCGGCCTCTTCG...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGTTTTCGGGTCGCCGCTaGGGGTCATTGGCACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQFSGRR*GSLAQP Trigger: GGGCTGTGCCAATGACCCGCAGCGGCGACCCGAAAA...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR TCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGGCGTGTAGCAGATGGTaGGCGGTGTCCAGAACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQACSRW*AVSRTA Trigger: TGCGGTTCTGGACACCGCTCACCATCTGCTACACGC...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGGCCTCCGGCCAGGTCTaGGTAAGGACAGACCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQASGQV*VRTDQR Trigger: ACGTTGGTCTGTCCTTACGCAGACCTGGCCGGAGGC...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTAGTGGGGAGAGGCTGCATCATTaGCCACCCCAAGAAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCLQASPWGQGLGDQASGERLHH*PPQEKE Trigger: CTCTTTTTCTTGGGGTGGGCAATGATGCAGCCTCTC...CCCACTAGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGGCCGCTGCGGGTCATTaGCACAGCCCACGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQAAAGH*HSPRRS Trigger: ACTTCTTCGTGGGCTGTGCCAATGACCCGCAGCGGC...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTAGTGGGTGGAGGCCTCTGGGATaGAAAATCCTGTATCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLQASPWGQGLGDQASGWRPLG*KILYLA Trigger: TGCCAGATACAGGATTTTCCATCCCAGAGGCCTCCA...CCCACTAGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGGTCTGAGAGGCTGCATCATTGCCCACCCCAAGAAAAAGAGGGTTCAAGCAGCAGGTTCAGCGTaGGGTGAGGGGCGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAGLRGCIIAHPKKKRVQAAGSA*GEGRPP Trigger: AGGAGGGCGCCCCTCACCGCACGCTGAACCTGCTGC...TTGAACCCTCTTTTTCTTGGGGTGGGCAATGATGCAGCCTCTCAGACCTGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR TCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGCCTCCTGCATGTAGATaGCCAGCAGCGTGTAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQPPACR*PAACSR Trigger: TCTGCTACACGCTGCTGGTCATCTACATGCAGGAGG...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGGTGGTCAGGAAGTCCTaGTTGATGAGGGCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGDQASGLETDSRSSLRQVVRKS*LMRATA Trigger: AGCTGTGGCCCTCATCAACCAGGACTTCCTGACCAC...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGGTCTGAGAGGCTGCATCATTGCCCACCCCAAGAAAAAGAGGGTTCAAGCCGAGGGCAGGGGCTaGCTTGGTGTTGACACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KAGLRGCIIAHPKKKRVQAEGRG*LGVDTG Trigger: TCCAGTGTCAACACCAAGCCAGCCCCTGCCCTCGGC...TTGAACCCTCTTTTTCTTGGGGTGGGCAATGATGCAGCCTCTCAGACCTGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGGTCTGAGAGGCTGCATCATTGCCCACCCCAAGAAAAAGAGGGTTCAAGGAAAATCCTGTATCTaGCAGAGGTCAAGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KAGLRGCIIAHPKKKRVQGKSCI*QRSSRV Trigger: CACCCTGCTTGACCTCTGCCAGATACAGGATTTTCC...TTGAACCCTCTTTTTCTTGGGGTGGGCAATGATGCAGCCTCTCAGACCTGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS GCA 90 bp | GTGCATGGGCCAGCAGGCCCAGGCACACCCCACAGTAGCGCTGGCTaGTGTGCAGCTCGTAGAGGCGGCAGACGTGGCGGTGGAGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VHGPAGPGTPHSSAG*CAARRGGRRGGGGA Trigger: GGCGCCTCCACCGCCACGTCTGCCGCCTCTACGAGCTGCACAGCAGCCAGCGCTACTGTGGGGTGTGCCTGGGCCTGCTGGCCCATGCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS GCA 90 bp | ACCCGGGACCCCACGACCGTCAGAAACAGGGCCAGCCCTGCCAGGTaGACCGTTTCCAGGGAGGCCCACTGGGCCCGAAGCCGCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TRDPTTVRNRASPAR*TVSREAHWARSRSF Trigger: AAAGGAGCGGCTTCGGGCCCAGTGGGCCTCCCTGGAAACGGTGCACCTGGCAGGGCTGGCCCTGTTTCTGACGGTCGTGGGGTCCCGGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS CCA 90 bp | AACAGGGCCAGCCCTGCCAGGTGCACCGTTTCCAGGGAGGCCCACTaGGCCCGAAGCCGCTCCTTTTCGGGTCGCCGCTGCGGGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: NRASPARCTVSREAH*ARSRSFSGRRCGSL Trigger: CAATGACCCGCAGCGGCGACCCGAAAAGGAGCGGCTTCGGGCCCAGTGGGCCTCCCTGGAAACGGTGCACCTGGCAGGGCTGGCCCTGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS CCA 90 bp | AACAGGGCCAGCCCTGCCAGGTGCACCGTTTCCAGGGAGGCCCACTaGGCCCGAAGCCGCTCCTTTTCGGGTCGCCGCTGCGGGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: NRASPARCTVSREAH*ARSRSFSGRRCGSL Trigger: AAGTGACCCGCAGCGGCGACCCGAAAAGGAGCGGCTTCGGGCCCAGTGGGCCTCCCTGGAAACGGTGCACCTGGCAGGGCTGGCCCTGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465575.1 |
||
| CDS GCA 90 bp | GGCCTCCGAGGTGGTCAGGAAGTCCTGGTTGATGAGGGCCACAGCTaGCAGGTCACCCACGGCAAAGGCTATGGCCAGGGCACGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLRGGQEVLVDEGHS*QVTHGKGYGQGTAQ Trigger: CTGGGCCGTGCCCTGGCCATAGCCTTTGCCGTGGGTGACCTGGCAGCTGTGGCCCTCATCAACCAGGACTTCCTGACCACCTCGGAGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTAGTGGGCGCCGCTGCGGGTCATaGGCACAGCCCACGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LCLQASPWGQGLGDQASGRRCGS*AQPTKK Trigger: CTTCTTCGTGGGCTGTGCCAATGACCCGCAGCGGCG...CCCACTAGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGGCTAGTGGGAGGGCAGGGGCTGGCTaGGTGTTGACACTGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCLQASPWGQGLGDQASGRAGAG*VLTLEA Trigger: GGCCTCCAGTGTCAACACCAAGCCAGCCCCTGCCCT...CCCACTAGCCTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS CCA 90 bp | AGCGGTGTCCAGAACCGCATGGCCTCCGAGGTGGTCAGGAAGTCCTaGTTGATGAGGGCCACAGCTGCCAGGTCACCCACGGCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGVQNRMASEVVRKS*LMRATAARSPTAKA Trigger: AGCCTTTGCCGTGGGTGACCTGGCAGCTGTGGCCCTCATCAACCAGGACTTCCTGACCACCTCGGAGGCCATGCGGTTCTGGACACCGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS-3UTR CAA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGGGCCCCGATCAGGCCTaGCAGGAGGGAGTCAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGDQASGLETDSRSSLRQGPDQA*QEGVKE Trigger: CTCCTTGACTCCCTCCTGCAAGGCCTGATCGGGGCC...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS GCA 90 bp | GCCTCTGGGATGGAAAATCCTGTATCTGGCAGAGGTCAAGCAGGGTaGGGACGCCCACGAGACACCAGAGCTCGCCCAGTAGGGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: ASGMENPVSGRGQAG*GRPRDTRARPVGRQ Trigger: TTGTCTCCCTACTGGGCGAGCTCTGGTGTCTCGTGGGCGTCCGCACCCTGCTTGACCTCTGCCAGATACAGGATTTTCCATCCCAGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CAA 90 bp | CTCGGAGATCAGGCTAGTGGGCTTGAGACAGACTCCAGATCCTCCCTGAGGCAGATCAGGCTAGTGGGCTaGAGACAGACTCCAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGDQASGLETDSRSSLRQIRLVG*RQTPDP Trigger: AGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGAT...CTGCCTCAGGGAGGATCTGGAGTCTGTCTCAAGCCCACTAGCCTGATCTCCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCCACTCTGCCTCCAGGCATCGCCCTGGGGTCAAGGCCTCGGAGATCAGAAGACATCGTCTTTATaGTTCATGGAGAAGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPLCLQASPWGQGLGDQKTSSL*FMEKGR Trigger: CCTTCCCTTCTCCATGAACAATAAAGACGATGTCTT...CTGATCTCCGAGGCCTTGACCCCAGGGCGATGCCTGGAGGCAGAGTGGCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGGTCTGAGAGGCTGCATCATTGCCCACCCCAAGAAAAAGAGGGTTCAAGTCAGGAAGTCCTGGTaGATGAGGGCCACAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KAGLRGCIIAHPKKKRVQVRKSW*MRATAA Trigger: GGCAGCTGTGGCCCTCATCAACCAGGACTTCCTGAC...TTGAACCCTCTTTTTCTTGGGGTGGGCAATGATGCAGCCTCTCAGACCTGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||
| CDS TCA 72 bp | GCCAGCCCGAGGCTCAGCAGCAGGTTCAGCGTGCGGTaGGGGGCGCCCTCCTGCAGGAAGCTCAGGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: ASPRLSSRFSVR*GAPSCRKLRPQ Trigger: CTGTGGCCTGAGCTTCCTGCAGGAGGGCGCCCCTCACCGCACGCTGAACCTGCTGCTGAGCCTCGGGCTGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS CCA 72 bp | AGCCCTGCCAGGTGCACCGTTTCCAGGGAGGCCCACTaGGCCCGAAGCCGCTCCTTTTCGGGTCGCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPARCTVSREAH*ARSRSFSGRRC Trigger: GCAGCGGCGACCCGAAAAGGAGCGGCTTCGGGCCCAGTGGGCCTCCCTGGAAACGGTGCACCTGGCAGGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS CCA 72 bp | CGGCACCCTGGGAGCCCTTGCCCAGGGACAGCAGCGTaGACACGGCCCGGAGGGAGAACTCGAGCACCACGA | + |
|
Preference number: 6 (lower is better) Translates to: RHPGSPCPGTAA*TRPGGRTRAPR Trigger: TCGTGGTGCTCGAGTTCTCCCTCCGGGCCGTGTCCACGCTGCTGTCCCTGGGCAAGGGCTCCCAGGGTGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS GCA 72 bp | CCCACGACCGTCAGAAACAGGGCCAGCCCTGCCAGGTaGACCGTTTCCAGGGAGGCCCACTGGGCCCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PTTVRNRASPAR*TVSREAHWARS Trigger: GCTTCGGGCCCAGTGGGCCTCCCTGGAAACGGTGCACCTGGCAGGGCTGGCCCTGTTTCTGACGGTCGTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS GCA 72 bp | CCAGCAGGCCCAGGCACACCCCACAGTAGCGCTGGCTaGTGTGCAGCTCGTAGAGGCGGCAGACGTGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PAGPGTPHSSAG*CAARRGGRRGG Trigger: ACCGCCACGTCTGCCGCCTCTACGAGCTGCACAGCAGCCAGCGCTACTGTGGGGTGTGCCTGGGCCTGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS GCA 72 bp | GGTGGTCAGGAAGTCCTGGTTGATGAGGGCCACAGCTaGCAGGTCACCCACGGCAAAGGCTATGGCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGQEVLVDEGHS*QVTHGKGYGQG Trigger: GCCCTGGCCATAGCCTTTGCCGTGGGTGACCTGGCAGCTGTGGCCCTCATCAACCAGGACTTCCTGACCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS CCA 72 bp | CAGAACCGCATGGCCTCCGAGGTGGTCAGGAAGTCCTaGTTGATGAGGGCCACAGCTGCCAGGTCACCCACG | + |
|
Preference number: 6 (lower is better) Translates to: QNRMASEVVRKS*LMRATAARSPT Trigger: CGTGGGTGACCTGGCAGCTGTGGCCCTCATCAACCAGGACTTCCTGACCACCTCGGAGGCCATGCGGTTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS CAA 90 bp | GGTGTCCAGAACCGCATGGCCTCCGAGGTGGTCAGGAAGTCCTGGTaGATGAGGGCCACAGCTGCCAGGTCACCCACGGCAAAGGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: GVQNRMASEVVRKSW*MRATAARSPTAKAM Trigger: CATAGCCTTTGCCGTGGGTGACCTGGCAGCTGTGGCCCTCATCAACCAGGACTTCCTGACCACCTCGGAGGCCATGCGGTTCTGGACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000375782.2 ENST00000465575.1 |
||
| CDS GCA 72 bp | ATGGAAAATCCTGTATCTGGCAGAGGTCAAGCAGGGTaGGGACGCCCACGAGACACCAGAGCTCGCCCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: MENPVSGRGQAG*GRPRDTRARPV Trigger: TACTGGGCGAGCTCTGGTGTCTCGTGGGCGTCCGCACCCTGCTTGACCTCTGCCAGATACAGGATTTTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375782.2 |
||