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Pregenerated sensors for TMEM78 (Homo sapiens)

Ensembl gene IDs: ENSG00000177800

Ensembl transcript IDs: ENST00000323223.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TTCCAATCTCCTCTACTAGCAACCTCCAGTATATTCTGGTTACCCTaGTCCAAAAATGCTCTAAACATGCCATGCCTGTGTACTACTTCC +
Preference number: 5 (lower is better)
Translates to: FQSPLLATSSIFWLP*SKNALNMPCLCTTS
Trigger: GGAAGTAGTACACAGGCATGGCATGTTTAGAGCATTTTTGGAGCAGGGTAACCAGAATATACTGGAGGTTGCTAGTAGAGGAGATTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323223.2
CDS CCA 90 bp GCACACAAACTCCTTTCCAACATGATATTACAATACCCAGATTTCTaGTGTCAAGCCACATGTCAGTATGAACGGTCCTGCACAGATGAC +
Preference number: 5 (lower is better)
Translates to: AHKLLSNMILQYPDF*CQATCQYERSCTDD
Trigger: GTCATCTGTGCAGGACCGTTCATACTGACATGTGGCTTGACACCAGAAATCTGGGTATTGTAATATCATGTTGGAAAGGAGTTTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323223.2
CDS CCA 90 bp CCCTTTCTTTTCCAATCTCCTCTACTAGCAACCTCCAGTATATTCTaGTTACCCTGCTCCAAAAATGCTCTAAACATGCCATGCCTGTGT +
Preference number: 5 (lower is better)
Translates to: PFLFQSPLLATSSIF*LPCSKNALNMPCLC
Trigger: ACACAGGCATGGCATGTTTAGAGCATTTTTGGAGCAGGGTAACCAGAATATACTGGAGGTTGCTAGTAGAGGAGATTGGAAAAGAAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323223.2
CDS CCA 90 bp GTCTATTGCAGACAATTACTTACGGGCTCACAAAAGAATATTCTCTaGTTTTGCCCAGTGGGATGCACTGTCCTACAAAGGCTGAAGATT +
Preference number: 5 (lower is better)
Translates to: VYCRQLLTGSQKNIL*FCPVGCTVLQRLKI
Trigger: AATCTTCAGCCTTTGTAGGACAGTGCATCCCACTGGGCAAAACCAGAGAATATTCTTTTGTGAGCCCGTAAGTAATTGTCTGCAATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323223.2
CDS GCA 72 bp TTCTGGTGTCAAGCCACATGTCAGTATGAACGGTCCTaGACAGATGACGTGTTCAACTTTCATGGTTGTCTC +
Preference number: 6 (lower is better)
Translates to: FWCQATCQYERS*TDDVFNFHGCL
Trigger: GAGACAACCATGAAAGTTGAACACGTCATCTGTGCAGGACCGTTCATACTGACATGTGGCTTGACACCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323223.2
CDS GCA 72 bp TTACTTACGGGCTCACAAAAGAATATTCTCTGGTTTTaGCCAGTGGGATGCACTGTCCTACAAAGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LLTGSQKNILWF*PVGCTVLQRLK
Trigger: CTTCAGCCTTTGTAGGACAGTGCATCCCACTGGGCAAAACCAGAGAATATTCTTTTGTGAGCCCGTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323223.2
CDS GCA 72 bp TGGTTACCCTGCTCCAAAAATGCTCTAAACATGCCATaGCTGTGTACTACTTCCCCATGGTTTATTCTCCCT +
Preference number: 6 (lower is better)
Translates to: WLPCSKNALNMP*LCTTSPWFILP
Trigger: AGGGAGAATAAACCATGGGGAAGTAGTACACAGGCATGGCATGTTTAGAGCATTTTTGGAGCAGGGTAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323223.2
CDS GCA 72 bp AACCTCCAGTATATTCTGGTTACCCTGCTCCAAAAATaGTCTAAACATGCCATGCCTGTGTACTACTTCCCC +
Preference number: 6 (lower is better)
Translates to: NLQYILVTLLQK*SKHAMPVYYFP
Trigger: GGGGAAGTAGTACACAGGCATGGCATGTTTAGAGCATTTTTGGAGCAGGGTAACCAGAATATACTGGAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323223.2
CDS CAA 90 bp TTGCAGACAATTACTTACGGGCTCACAAAAGAATATTCTCTGGTTTaGCCCAGTGGGATGCACTGTCCTACAAAGGCTGAAGATTTTGGG +
Preference number: 6 (lower is better)
Translates to: LQTITYGLTKEYSLV*PSGMHCPTKAEDFG
Trigger: CCCAAAATCTTCAGCCTTTGTAGGACAGTGCATCCCACTGGGCAAAACCAGAGAATATTCTTTTGTGAGCCCGTAAGTAATTGTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323223.2
CDS CAA 72 bp ATTACTTACGGGCTCACAAAAGAATATTCTCTGGTTTaGCCCAGTGGGATGCACTGTCCTACAAAGGCTGAA +
Preference number: 6 (lower is better)
Translates to: ITYGLTKEYSLV*PSGMHCPTKAE
Trigger: TTCAGCCTTTGTAGGACAGTGCATCCCACTGGGCAAAACCAGAGAATATTCTTTTGTGAGCCCGTAAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323223.2
CDS CCA 72 bp TTCCAATCTCCTCTACTAGCAACCTCCAGTATATTCTaGTTACCCTGCTCCAAAAATGCTCTAAACATGCCA +
Preference number: 6 (lower is better)
Translates to: FQSPLLATSSIF*LPCSKNALNMP
Trigger: TGGCATGTTTAGAGCATTTTTGGAGCAGGGTAACCAGAATATACTGGAGGTTGCTAGTAGAGGAGATTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323223.2
CDS CCA 72 bp TTGTCCTTGTGCTTTGGAGTGTCTTCAGGCTTTCCCTaGATAATGATAGCCAAAAGTATTCAGAGTTTTAGA +
Preference number: 6 (lower is better)
Translates to: LSLCFGVSSGFP*IMIAKSIQSFR
Trigger: TCTAAAACTCTGAATACTTTTGGCTATCATTATCCAGGGAAAGCCTGAAGACACTCCAAAGCACAAGGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323223.2