Pregenerated sensors for TMEM78 (Homo sapiens)
Ensembl gene IDs: ENSG00000177800Ensembl transcript IDs: ENST00000323223.2
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | TTCCAATCTCCTCTACTAGCAACCTCCAGTATATTCTGGTTACCCTaGTCCAAAAATGCTCTAAACATGCCATGCCTGTGTACTACTTCC | + |
Preference number: 5 (lower is better) Translates to: FQSPLLATSSIFWLP*SKNALNMPCLCTTS Trigger: GGAAGTAGTACACAGGCATGGCATGTTTAGAGCATTTTTGGAGCAGGGTAACCAGAATATACTGGAGGTTGCTAGTAGAGGAGATTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000323223.2 |
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CDS CCA 90 bp | GCACACAAACTCCTTTCCAACATGATATTACAATACCCAGATTTCTaGTGTCAAGCCACATGTCAGTATGAACGGTCCTGCACAGATGAC | + |
Preference number: 5 (lower is better) Translates to: AHKLLSNMILQYPDF*CQATCQYERSCTDD Trigger: GTCATCTGTGCAGGACCGTTCATACTGACATGTGGCTTGACACCAGAAATCTGGGTATTGTAATATCATGTTGGAAAGGAGTTTGTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323223.2 |
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CDS CCA 90 bp | CCCTTTCTTTTCCAATCTCCTCTACTAGCAACCTCCAGTATATTCTaGTTACCCTGCTCCAAAAATGCTCTAAACATGCCATGCCTGTGT | + |
Preference number: 5 (lower is better) Translates to: PFLFQSPLLATSSIF*LPCSKNALNMPCLC Trigger: ACACAGGCATGGCATGTTTAGAGCATTTTTGGAGCAGGGTAACCAGAATATACTGGAGGTTGCTAGTAGAGGAGATTGGAAAAGAAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323223.2 |
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CDS CCA 90 bp | GTCTATTGCAGACAATTACTTACGGGCTCACAAAAGAATATTCTCTaGTTTTGCCCAGTGGGATGCACTGTCCTACAAAGGCTGAAGATT | + |
Preference number: 5 (lower is better) Translates to: VYCRQLLTGSQKNIL*FCPVGCTVLQRLKI Trigger: AATCTTCAGCCTTTGTAGGACAGTGCATCCCACTGGGCAAAACCAGAGAATATTCTTTTGTGAGCCCGTAAGTAATTGTCTGCAATAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323223.2 |
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CDS GCA 72 bp | TTCTGGTGTCAAGCCACATGTCAGTATGAACGGTCCTaGACAGATGACGTGTTCAACTTTCATGGTTGTCTC | + |
Preference number: 6 (lower is better) Translates to: FWCQATCQYERS*TDDVFNFHGCL Trigger: GAGACAACCATGAAAGTTGAACACGTCATCTGTGCAGGACCGTTCATACTGACATGTGGCTTGACACCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323223.2 |
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CDS GCA 72 bp | TTACTTACGGGCTCACAAAAGAATATTCTCTGGTTTTaGCCAGTGGGATGCACTGTCCTACAAAGGCTGAAG | + |
Preference number: 6 (lower is better) Translates to: LLTGSQKNILWF*PVGCTVLQRLK Trigger: CTTCAGCCTTTGTAGGACAGTGCATCCCACTGGGCAAAACCAGAGAATATTCTTTTGTGAGCCCGTAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323223.2 |
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CDS GCA 72 bp | TGGTTACCCTGCTCCAAAAATGCTCTAAACATGCCATaGCTGTGTACTACTTCCCCATGGTTTATTCTCCCT | + |
Preference number: 6 (lower is better) Translates to: WLPCSKNALNMP*LCTTSPWFILP Trigger: AGGGAGAATAAACCATGGGGAAGTAGTACACAGGCATGGCATGTTTAGAGCATTTTTGGAGCAGGGTAACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323223.2 |
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CDS GCA 72 bp | AACCTCCAGTATATTCTGGTTACCCTGCTCCAAAAATaGTCTAAACATGCCATGCCTGTGTACTACTTCCCC | + |
Preference number: 6 (lower is better) Translates to: NLQYILVTLLQK*SKHAMPVYYFP Trigger: GGGGAAGTAGTACACAGGCATGGCATGTTTAGAGCATTTTTGGAGCAGGGTAACCAGAATATACTGGAGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000323223.2 |
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CDS CAA 90 bp | TTGCAGACAATTACTTACGGGCTCACAAAAGAATATTCTCTGGTTTaGCCCAGTGGGATGCACTGTCCTACAAAGGCTGAAGATTTTGGG | + |
Preference number: 6 (lower is better) Translates to: LQTITYGLTKEYSLV*PSGMHCPTKAEDFG Trigger: CCCAAAATCTTCAGCCTTTGTAGGACAGTGCATCCCACTGGGCAAAACCAGAGAATATTCTTTTGTGAGCCCGTAAGTAATTGTCTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323223.2 |
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CDS CAA 72 bp | ATTACTTACGGGCTCACAAAAGAATATTCTCTGGTTTaGCCCAGTGGGATGCACTGTCCTACAAAGGCTGAA | + |
Preference number: 6 (lower is better) Translates to: ITYGLTKEYSLV*PSGMHCPTKAE Trigger: TTCAGCCTTTGTAGGACAGTGCATCCCACTGGGCAAAACCAGAGAATATTCTTTTGTGAGCCCGTAAGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323223.2 |
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CDS CCA 72 bp | TTCCAATCTCCTCTACTAGCAACCTCCAGTATATTCTaGTTACCCTGCTCCAAAAATGCTCTAAACATGCCA | + |
Preference number: 6 (lower is better) Translates to: FQSPLLATSSIF*LPCSKNALNMP Trigger: TGGCATGTTTAGAGCATTTTTGGAGCAGGGTAACCAGAATATACTGGAGGTTGCTAGTAGAGGAGATTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000323223.2 |
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CDS CCA 72 bp | TTGTCCTTGTGCTTTGGAGTGTCTTCAGGCTTTCCCTaGATAATGATAGCCAAAAGTATTCAGAGTTTTAGA | + |
Preference number: 6 (lower is better) Translates to: LSLCFGVSSGFP*IMIAKSIQSFR Trigger: TCTAAAACTCTGAATACTTTTGGCTATCATTATCCAGGGAAAGCCTGAAGACACTCCAAAGCACAAGGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323223.2 |