RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM74 (Homo sapiens)

Ensembl gene IDs: ENSG00000164841

Ensembl transcript IDs: ENST00000297459.4, ENST00000518838.1

Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGGCTTAAGGACTGTTGCTACCATGAGGGAAGTGCTCGTTGCTTaGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCCAAAA +
Preference number: 1 (lower is better)
Translates to: LGLRTVATMREVLVA*PTASDTACEAQSPK
Trigger: TTTTGGGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTTCCCTCATGGTAGCAACAGTCCTTAAGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 90 bp TGTTGCTACCATGAGGGAAGTGCTCGTTGCTTGGCCTACAGCAAGTaGTACAGCCTGCGAGGCACAGTCCCCAAAAGTCTAGCTGCAATT +
Preference number: 1 (lower is better)
Translates to: CCYHEGSARCLAYSK*YSLRGTVPKSLAAI
Trigger: AATTGCAGCTAGACTTTTGGGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTTCCCTCATGGTAGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 90 bp GAGAAGAGTTTGTGCTGCATGAGGCAAGAGTTCACAGTTGCTGAATaGCATCTAGACCACTGTGAGTGGGAGGTGAGTTCTGACGATGAC +
Preference number: 1 (lower is better)
Translates to: EKSLCCMRQEFTVAE*HLDHCEWEVSSDDD
Trigger: GTCATCGTCAGAACTCACCTCCCACTCACAGTGGTCTAGATGTCATTCAGCAACTGTGAACTCTTGCCTCATGCAGCACAAACTCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 90 bp GCAAAATGTAAGGTATTTCTGAGGCTGCATTTCCCATCCCTTTTCTaGACCGTCACCATAATGAGGCGGTCTGTCACTGTGAACACCCAG +
Preference number: 1 (lower is better)
Translates to: AKCKVFLRLHFPSLF*TVTIMRRSVTVNTQ
Trigger: CTGGGTGTTCACAGTGACAGACCGCCTCATTATGGTGACGGTTCAGAAAAGGGATGGGAAATGCAGCCTCAGAAATACCTTACATTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CCA 90 bp GGGGCCAGTACATCTTATTATGTGATCTGCTTTAAGAGCTCCCAATaGGTGGGAAGGACACACAGCGCTGCAAAGAAAACTCTTTGCAAA +
Preference number: 1 (lower is better)
Translates to: GASTSYYVICFKSSQ*VGRTHSAAKKTLCK
Trigger: TTTGCAAAGAGTTTTCTTTGCAGCGCTGTGTGTCCTTCCCACCCATTGGGAGCTCTTAAAGCAGATCACATAATAAGATGTACTGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 90 bp AAAGACAGCTTTCTTTCTGTAACTCACCCCATTGGGCCACACTGCTaGAAGACGAGCTGTCTTCTCATTGAGACTAGGAAGATGACTCTT +
Preference number: 1 (lower is better)
Translates to: KDSFLSVTHPIGPHC*KTSCLLIETRKMTL
Trigger: AAGAGTCATCTTCCTAGTCTCAATGAGAAGACAGCTCGTCTTTCAGCAGTGTGGCCCAATGGGGTGAGTTACAGAAAGAAAGCTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR GCA 90 bp TTGGCAGCGCAGTCTCTTTTCAGAAATTGTACCTTGAAGGGCATGTaGCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGTATGAG +
Preference number: 1 (lower is better)
Translates to: LAAQSLFRNCTLKGM*QHWSNWVPKTNKYE
Trigger: CTCATACTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGTACAATTTCTGAAAAGAGACTGCGCTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 90 bp GAAATATATTTAAAATGTCTCATGCCTTGCCTCTTGCTGCTGGTGTaGGAACCAGCAGACTTCAAGAGCACAGATAACCAGTATGATGGC +
Preference number: 1 (lower is better)
Translates to: EIYLKCLMPCLLLLV*EPADFKSTDNQYDG
Trigger: GCCATCATACTGGTTATCTGTGCTCTTGAAGTCTGCTGGTTCTCACACCAGCAGCAAGAGGCAAGGCATGAGACATTTTAAATATATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 90 bp ACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATaGAGGATGCAAGACCAAAACTATAGGTATTGTATGCCCAATGTC +
Preference number: 1 (lower is better)
Translates to: TSTILKRQTEGHKSP*RMQDQNYRYCMPNV
Trigger: GACATTGGGCATACAATACCTATAGTTTTGGTCTTGCATCCTTCATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CCA 90 bp CTCACTCAGCAGATCGTTTCCTTCTTGTTTCAACATCATCCAAAGTaGATCCTTAAGCAGGCTAGAGCTGGACTTAGAAACCTTCAGAAT +
Preference number: 1 (lower is better)
Translates to: LTQQIVSFLFQHHPK*ILKQARAGLRNLQN
Trigger: ATTCTGAAGGTTTCTAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGAAGGAAACGATCTGCTGAGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR GCA 90 bp ATAGGTATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTaGCAAAGTACCTCTAGAGCCAAAAACACTCTTTGTCAGATTGGG +
Preference number: 1 (lower is better)
Translates to: IGIVCPMSIECITWS*QSTSRAKNTLCQIG
Trigger: CCCAATCTGACAAAGAGTGTTTTTGGCTCTAGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAATACCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR GCA 90 bp TGCAAGACCAAAACTATAGGTATTGTATGCCCAATGTCTATAGAATaGATCACCTGGTCTTGCCAAAGTACCTCTAGAGCCAAAAACACT +
Preference number: 1 (lower is better)
Translates to: CKTKTIGIVCPMSIE*ITWSCQSTSRAKNT
Trigger: AGTGTTTTTGGCTCTAGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAATACCTATAGTTTTGGTCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR GCA 90 bp ACAAATCTCCATGAAGGATGCAAGACCAAAACTATAGGTATTGTATaGCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACC +
Preference number: 1 (lower is better)
Translates to: TNLHEGCKTKTIGIV*PMSIECITWSCQST
Trigger: GGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAATACCTATAGTTTTGGTCTTGCATCCTTCATGGAGATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CCA 90 bp AAAACTATAGGTATTGTATGCCCAATGTCTATAGAATGCATCACCTaGTCTTGCCAAAGTACCTCTAGAGCCAAAAACACTCTTTGTCAG +
Preference number: 1 (lower is better)
Translates to: KTIGIVCPMSIECIT*SCQSTSRAKNTLCQ
Trigger: CTGACAAAGAGTGTTTTTGGCTCTAGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAATACCTATAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 90 bp GCATCTCATTCTGAGGCTGATTCCAAATTCTTCATTCATGACTTGTaGAAGACTTCTCTTCTTCTTAATGTCAATAGTAAGGCATGCCAA +
Preference number: 1 (lower is better)
Translates to: ASHSEADSKFFIHDL*KTSLLLNVNSKACQ
Trigger: TTGGCATGCCTTACTATTGACATTAAGAAGAAGAGAAGTCTTTCACAAGTCATGAATGAAGAATTTGGAATCAGCCTCAGAATGAGATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 90 bp GCAAGATTCATTAAATGCTTCCACATGAAAAGCTTTATTATCAAGTaGAAAGACCTCCTAACACTTGATTCCCAAACTCCTCTTCCTTCA +
Preference number: 1 (lower is better)
Translates to: ARFIKCFHMKSFIIK*KDLLTLDSQTPLPS
Trigger: TGAAGGAAGAGGAGTTTGGGAATCAAGTGTTAGGAGGTCTTTTCACTTGATAATAAAGCTTTTCATGTGGAAGCATTTAATGAATCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 90 bp TACATAAACCAAATACCCAGGGAAAAGTCGATTAAGGCAAGTATCTaGATAATGTCACCACAGCCCAAAAGAAGTCATTCAGATGATTTT +
Preference number: 1 (lower is better)
Translates to: YINQIPREKSIKASI*IMSPQPKRSHSDDF
Trigger: AAAATCATCTGAATGACTTCTTTTGGGCTGTGGTGACATTATTCAGATACTTGCCTTAATCGACTTTTCCCTGGGTATTTGGTTTATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR GCA 90 bp CTGCAAAGAAAACTCTTTGCAAACTCTACCACTAACAGTTTAAGGTaGCCTAAAAAGAACTGGCTTATAAAGATATTAGGAGCCTTAAAT +
Preference number: 1 (lower is better)
Translates to: LQRKLFANSTTNSLR*PKKNWLIKILGALN
Trigger: ATTTAAGGCTCCTAATATCTTTATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAAGAGTTTTCTTTGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CAA 90 bp CACCATAATGAGGCGGTCTGTCACTGTGAACACCCAGTGTGTGTCTaGCAAAGTGAGCACCTTGCTCATCATGCTGCTCTTAGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: HHNEAVCHCEHPVCV*QSEHLAHHAALREE
Trigger: CTCTTCTCTAAGAGCAGCATGATGAGCAAGGTGCTCACTTTGCAAGACACACACTGGGTGTTCACAGTGACAGACCGCCTCATTATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CAA 90 bp GGTAAAGGCACACATAAGTTTGGCAGCGCAGTCTCTTTTCAGAAATaGTACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCC +
Preference number: 2 (lower is better)
Translates to: GKGTHKFGSAVSFQK*YLEGHVPALVQLGP
Trigger: GGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGTACAATTTCTGAAAAGAGACTGCGCTGCCAAACTTATGTGTGCCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR TCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGGGACTGTTGCTACCATaGGGGAAGTGCTCGTTGCTT +
Preference number: 2 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKGLLLP*GKCSLL
Trigger: AAGCAACGAGCACTTCCCTCATGGTAGCAACAGTCC...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGTGTAACTCACCCCATTaGGCCACACTGCTGAAAGAC +
Preference number: 2 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKCNSPH*ATLLKD
Trigger: GTCTTTCAGCAGTGTGGCCCAATGGGGTGAGTTACA...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR TCA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTAGGCGGTCTGTCACTGTaGACACCCAGTGTGTGTCTT +
Preference number: 2 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLGGLSL*TPSVCL
Trigger: AAGACACACACTGGGTGTTCACAGTGACAGACCGCC...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR GCA 90 bp TTTGCCAAAGTCACCCATGTATTCCACAGTTGTCCACAACACCACAAACTTCAGGCAAGTGATACAGCCTaGGAGGCACAGTCCCCAAAA +
Preference number: 2 (lower is better)
Translates to: FAKVTHVFHSCPQHHKLQASDTA*EAQSPK
Trigger: TTTTGGGGACTGTGCCTCGCAGGCTGTATCACTTGC...CTGAAGTTTGTGGTGTTGTGGACAACTGTGGAATACATGGGTGACTTTGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR GCA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGACCCAGTGTGTGTCTTaGAAAGTGAGCACCTTGCTC +
Preference number: 2 (lower is better)
Translates to: GNNQHHIEETDGRSQISMTQCVS*KVSTLL
Trigger: GAGCAAGGTGCTCACTTTGCAAGACACACACTGGGT...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGGAAGTGCTCGTTGCTTaGCCTACAGCAAGTGATACA +
Preference number: 2 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKEVLVA*PTASDT
Trigger: TGTATCACTTGCTGTAGGCCAAGCAACGAGCACTTC...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR TCA 90 bp GATCCTGGTAACACAATCATGGAAGTTACAACAACTCTTAGAGCACAGGTTGGACTCTTGCTGCTGGTGTaGGAACCAGCAGACTTCAAG +
Preference number: 2 (lower is better)
Translates to: DPGNTIMEVTTTLRAQVGLLLLV*EPADFK
Trigger: CTTGAAGTCTGCTGGTTCTCACACCAGCAGCAAGAG...TCCAACCTGTGCTCTAAGAGTTGTTGTAACTTCCATGATTGTGTTACCAGGATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR GCA 90 bp TTTTTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTTGTTTTGCCTTGCCTCTTGCTaGTGGTGTGAGAACCAGCAG +
Preference number: 2 (lower is better)
Translates to: FLTHSSDLLTQQIVSFLFCLASC*WCENQQ
Trigger: CTGCTGGTTCTCACACCAGCAGCAAGAGGCAAGGCA...AAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR GCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGGAGAAGAGTTTGTGCTaGATGAGGCAAGAGTTCACA +
Preference number: 2 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKEKSLC*MRQEFT
Trigger: TGTGAACTCTTGCCTCATGCAGCACAAACTCTTCTC...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR TCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGATTAAGGCAAGTATCTaGATAATGTCACCACAGCCC +
Preference number: 2 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKIKASI*IMSPQP
Trigger: GGGCTGTGGTGACATTATTCAGATACTTGCCTTAAT...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR GCA 90 bp GATCCTGGTAACACAATCATGGAAGTTACAACAACTCTTAGAGCACAGGTTGGAGGGCTTAAGGACTGTTaGTACCATGAGGGAAGTGCT +
Preference number: 2 (lower is better)
Translates to: DPGNTIMEVTTTLRAQVGGLKDC*YHEGSA
Trigger: AGCACTTCCCTCATGGTAGCAACAGTCCTTAAGCCC...TCCAACCTGTGCTCTAAGAGTTGTTGTAACTTCCATGATTGTGTTACCAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CAA 90 bp TTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTaGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCT +
Preference number: 2 (lower is better)
Translates to: LTHSSDLLTQQIVSF*FQHHPKWILKQARA
Trigger: AGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR TCA 90 bp GATCCTGGTAACACAATCATGGAAGTTACAACAACTCTTAGAGCACAGGTTGGATTCCCATCCCTTTTCTaGACCGTCACCATAATGAGG +
Preference number: 2 (lower is better)
Translates to: DPGNTIMEVTTTLRAQVGFPSLF*TVTIMR
Trigger: CCTCATTATGGTGACGGTTCAGAAAAGGGATGGGAA...TCCAACCTGTGCTCTAAGAGTTGTTGTAACTTCCATGATTGTGTTACCAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGCTGCAATTCTATTGGTaGTTTTCCCCAAACAGCAAT +
Preference number: 2 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKLQFYW*FSPNSN
Trigger: ATTGCTGTTTGGGGAAAACCACCAATAGAATTGCAG...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CAA 90 bp ACACCCATGAGAGCTCATCCACATAAATATCCTGATTCACACATTTaGCCAAAGTCACCCATGTATTCCACAGTTGTCCACAACACCACA +
Preference number: 2 (lower is better)
Translates to: TPMRAHPHKYPDSHI*PKSPMYSTVVHNTT
Trigger: TGTGGTGTTGTGGACAACTGTGGAATACATGGGTGACTTTGGCAAAATGTGTGAATCAGGATATTTATGTGGATGAGCTCTCATGGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR TCA 90 bp TGGAAGCACACCAGAGCCAATCATGACTCAGGCCTGTCTAGATGTTTAGATGTCATGGATAAGCACCTTTaGGAATTAGATGTAAGCCTT +
Preference number: 2 (lower is better)
Translates to: WKHTRANHDSGLSRCLDVMDKHL*ELDVSL
Trigger: AAGGCTTACATCTAATTCTCAAAGGTGCTTATCCAT...GACATCTAAACATCTAGACAGGCCTGAGTCATGATTGGCTCTGGTGTGCTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR TCA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTAAGAGTTCACAGTTGCTaGATGACATCTAGACCACTG +
Preference number: 2 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLRVHSC*MTSRPL
Trigger: CAGTGGTCTAGATGTCATTCAGCAACTGTGAACTCT...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR TCA 90 bp TTTTTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTTGTTTAGAGTTTGTGCTGCATaGGGCAAGAGTTCACAGTTG +
Preference number: 2 (lower is better)
Translates to: FLTHSSDLLTQQIVSFLFRVCAA*GKSSQL
Trigger: CAACTGTGAACTCTTGCCTCATGCAGCACAAACTCT...AAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR TCA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATAATTGGGCCACACTGCTaGAAGACGAGCTGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: FANSTTNSLRCPKKNWLIIGPHC*KTSCLL
Trigger: GAGAAGACAGCTCGTCTTTCAGCAGTGTGGCCCAAT...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CCA 90 bp TTTGCCAAAGTCACCCATGTATTCCACAGTTGTCCACAACACCACAAACTTCAGAGGTGTGGCTGGTTGTaGTTTCTTATACATCTTACA +
Preference number: 2 (lower is better)
Translates to: FAKVTHVFHSCPQHHKLQRCGWL*FLIHLT
Trigger: TGTAAGATGTATAAGAAACCACAACCAGCCACACCT...CTGAAGTTTGTGGTGTTGTGGACAACTGTGGAATACATGGGTGACTTTGGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CCA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTACTGGCACCAACACTGTaGTTTAAATTCACATTGGTC +
Preference number: 2 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLLAPTL*FKFTLV
Trigger: GACCAATGTGAATTTAAACCACAGTGTTGGTGCCAG...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CAA 90 bp CTGGTAACACAATCATGGAAGTTACAACAACTCTTAGAGCACAGGTaGGAAAAACCTCCAGGCAGAGTTGCAAAATGTAAGGTATTTCTG +
Preference number: 2 (lower is better)
Translates to: LVTQSWKLQQLLEHR*EKPPGRVAKCKVFL
Trigger: CAGAAATACCTTACATTTTGCAACTCTGCCTGGAGGTTTTTCCAACCTGTGCTCTAAGAGTTGTTGTAACTTCCATGATTGTGTTACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR GCA 90 bp GATCCTGGTAACACAATCATGGAAGTTACAACAACTCTTAGAGCACAGGTTGGACCCCAAAAGTCTAGCTaGAATTCTATTGGTGGTTTT +
Preference number: 2 (lower is better)
Translates to: DPGNTIMEVTTTLRAQVGPQKSS*NSIGGF
Trigger: AAAACCACCAATAGAATTGCAGCTAGACTTTTGGGG...TCCAACCTGTGCTCTAAGAGTTGTTGTAACTTCCATGATTGTGTTACCAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CCA 90 bp TTTTTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTTGTTTCAACATCATCCAAAGTaGATCCTTAAGCAGGCTAGA +
Preference number: 2 (lower is better)
Translates to: FLTHSSDLLTQQIVSFLFQHHPK*ILKQAR
Trigger: TCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTG...AAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CAA 90 bp TCATATGCCCATCCTCTCTTTTTACTATCTTCTGAGCCTCCCTTTTaGTATTTCAGTTCAACCCTTAAGTCATATGCAGCATACCTCACT +
Preference number: 2 (lower is better)
Translates to: SYAHPLFLLSSEPPF*YFSSTLKSYAAYLT
Trigger: AGTGAGGTATGCTGCATATGACTTAAGGGTTGAACTGAAATACAAAAAGGGAGGCTCAGAAGATAGTAAAAAGAGAGGATGGGCATATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR GCA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATATTACTTCCTCATTCCTaGTGTCTCATACCAATTCCC +
Preference number: 2 (lower is better)
Translates to: FANSTTNSLRCPKKNWLILLPHS*CLIPIP
Trigger: GGGAATTGGTATGAGACAGCAGGAATGAGGAAGTAA...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CCA 72 bp AGGACTGTTGCTACCATGAGGGAAGTGCTCGTTGCTTaGCCTACAGCAAGTGATACAGCCTGCGAGGCACAG +
Preference number: 3 (lower is better)
Translates to: RTVATMREVLVA*PTASDTACEAQ
Trigger: CTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTTCCCTCATGGTAGCAACAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 72 bp CATGAGGGAAGTGCTCGTTGCTTGGCCTACAGCAAGTaGTACAGCCTGCGAGGCACAGTCCCCAAAAGTCTA +
Preference number: 3 (lower is better)
Translates to: HEGSARCLAYSK*YSLRGTVPKSL
Trigger: TAGACTTTTGGGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTTCCCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 72 bp GTTTGGCAGCGCAGTCTCTTTTCAGAAATTGTACCTTaGAGGGCATGTGCCAGCACTGGTCCAATTGGGTCC +
Preference number: 3 (lower is better)
Translates to: VWQRSLFSEIVP*RACASTGPIGS
Trigger: GGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGTACAATTTCTGAAAAGAGACTGCGCTGCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 72 bp TTGTGCTGCATGAGGCAAGAGTTCACAGTTGCTGAATaGCATCTAGACCACTGTGAGTGGGAGGTGAGTTCT +
Preference number: 3 (lower is better)
Translates to: LCCMRQEFTVAE*HLDHCEWEVSS
Trigger: AGAACTCACCTCCCACTCACAGTGGTCTAGATGTCATTCAGCAACTGTGAACTCTTGCCTCATGCAGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CAA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGTGCAAAGTGAGCACCTaGCTCATCATGCTGCTCTTA +
Preference number: 3 (lower is better)
Translates to: GNNQHHIEETDGRSQISMCKVST*LIMLLL
Trigger: TAAGAGCAGCATGATGAGCAAGGTGCTCACTTTGCA...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 72 bp TTTCTTTCTGTAACTCACCCCATTGGGCCACACTGCTaGAAGACGAGCTGTCTTCTCATTGAGACTAGGAAG +
Preference number: 3 (lower is better)
Translates to: FLSVTHPIGPHC*KTSCLLIETRK
Trigger: CTTCCTAGTCTCAATGAGAAGACAGCTCGTCTTTCAGCAGTGTGGCCCAATGGGGTGAGTTACAGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CAA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGCTAGCTGCAATTCTATaGGTGGTTTTCCCCAAACAG +
Preference number: 3 (lower is better)
Translates to: GNNQHHIEETDGRSQISMLAAIL*VVFPKQ
Trigger: CTGTTTGGGGAAAACCACCAATAGAATTGCAGCTAG...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CAA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGAACCTCCAGGCAGAGTaGCAAAATGTAAGGTATTTC +
Preference number: 3 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKNLQAE*QNVRYF
Trigger: GAAATACCTTACATTTTGCAACTCTGCCTGGAGGTT...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CAA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGCCATGTATTCCACAGTaGTCCACAACACCACAAACT +
Preference number: 3 (lower is better)
Translates to: GNNQHHIEETDGRSQISMPCIPQ*STTPQT
Trigger: AGTTTGTGGTGTTGTGGACAACTGTGGAATACATGG...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CAA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGTCTGAGCCTCCCTTTTaGTATTTCAGTTCAACCCTT +
Preference number: 3 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKSEPPF*YFSSTL
Trigger: AAGGGTTGAACTGAAATACAAAAAGGGAGGCTCAGA...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CAA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGGATAGGTGTGGCTGGTaGTGGTTTCTTATACATCTT +
Preference number: 3 (lower is better)
Translates to: GNNQHHIEETDGRSQISMDRCGW*WFLIHL
Trigger: AAGATGTATAAGAAACCACAACCAGCCACACCTATC...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CAA 90 bp TTTTTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTTGTTTAAAATGTCTCATGCCTaGCCTCTTGCTGCTGGTGTG +
Preference number: 3 (lower is better)
Translates to: FLTHSSDLLTQQIVSFLFKMSHA*PLAAGV
Trigger: CACACCAGCAGCAAGAGGCAAGGCATGAGACATTTT...AAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CAA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTACTCTTAGAGAAGAGTTaGTGCTGCATGAGGCAAGAG +
Preference number: 3 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLLLEKS*CCMRQE
Trigger: CTCTTGCCTCATGCAGCACAAACTCTTCTCTAAGAG...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR GCA 72 bp CAGTCTCTTTTCAGAAATTGTACCTTGAAGGGCATGTaGCAGCACTGGTCCAATTGGGTCCCTAAAACAAAT +
Preference number: 3 (lower is better)
Translates to: QSLFRNCTLKGM*QHWSNWVPKTN
Trigger: ATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGTACAATTTCTGAAAAGAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CCA 72 bp ACATCTTATTATGTGATCTGCTTTAAGAGCTCCCAATaGGTGGGAAGGACACACAGCGCTGCAAAGAAAACT +
Preference number: 3 (lower is better)
Translates to: TSYYVICFKSSQ*VGRTHSAAKKT
Trigger: AGTTTTCTTTGCAGCGCTGTGTGTCCTTCCCACCCATTGGGAGCTCTTAAAGCAGATCACATAATAAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR-3UTR CAA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATACACCCAGTGTGTGTCTaGCAAAGTGAGCACCTTGCT +
Preference number: 3 (lower is better)
Translates to: FANSTTNSLRCPKKNWLIHPVCV*QSEHLA
Trigger: AGCAAGGTGCTCACTTTGCAAGACACACACTGGGTG...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR GCA 72 bp GTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTaGCAAAGTACCTCTAGAGCCAAAAACACTCTTTGT +
Preference number: 3 (lower is better)
Translates to: VCPMSIECITWS*QSTSRAKNTLC
Trigger: ACAAAGAGTGTTTTTGGCTCTAGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CCA 72 bp CAGATCGTTTCCTTCTTGTTTCAACATCATCCAAAGTaGATCCTTAAGCAGGCTAGAGCTGGACTTAGAAAC +
Preference number: 3 (lower is better)
Translates to: QIVSFLFQHHPK*ILKQARAGLRN
Trigger: GTTTCTAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGAAGGAAACGATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CCA 72 bp GGTATTGTATGCCCAATGTCTATAGAATGCATCACCTaGTCTTGCCAAAGTACCTCTAGAGCCAAAAACACT +
Preference number: 3 (lower is better)
Translates to: GIVCPMSIECIT*SCQSTSRAKNT
Trigger: AGTGTTTTTGGCTCTAGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CCA 72 bp CTTGATAGAACAGAATCAAGGGTTATAGCAGTCATGTaGGTAAAAGCAACCATGGCCTCCAAGAACTTCATG +
Preference number: 3 (lower is better)
Translates to: LDRTESRVIAVM*VKATMASKNFM
Trigger: CATGAAGTTCTTGGAGGCCATGGTTGCTTTTACCCACATGACTGCTATAACCCTTGATTCTGTTCTATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CCA 72 bp TTCAGAAATTGTACCTTGAAGGGCATGTGCCAGCACTaGTCCAATTGGGTCCCTAAAACAAATAAGTATGAG +
Preference number: 3 (lower is better)
Translates to: FRNCTLKGMCQH*SNWVPKTNKYE
Trigger: CTCATACTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGTACAATTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR GCA 72 bp AAAACTATAGGTATTGTATGCCCAATGTCTATAGAATaGATCACCTGGTCTTGCCAAAGTACCTCTAGAGCC +
Preference number: 3 (lower is better)
Translates to: KTIGIVCPMSIE*ITWSCQSTSRA
Trigger: GGCTCTAGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAATACCTATAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR TCA 72 bp CAAATACCCAGGGAAAAGTCGATTAAGGCAAGTATCTaGATAATGTCACCACAGCCCAAAAGAAGTCATTCA +
Preference number: 3 (lower is better)
Translates to: QIPREKSIKASI*IMSPQPKRSHS
Trigger: TGAATGACTTCTTTTGGGCTGTGGTGACATTATTCAGATACTTGCCTTAATCGACTTTTCCCTGGGTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CCA 72 bp TCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTaGCTTATAAAGATATTAGGAGCCTTAAATCATCCA +
Preference number: 3 (lower is better)
Translates to: STTNSLRCPKKN*LIKILGALNHP
Trigger: TGGATGATTTAAGGCTCCTAATATCTTTATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CCA 72 bp AATCTTCTCATCGTAGTCATTCTTTATGTCCAATTCTaGGAAAGGTTAAACCCATTACAGAGAACAGTAAGT +
Preference number: 3 (lower is better)
Translates to: NLLIVVILYVQF*ERLNPLQRTVS
Trigger: ACTTACTGTTCTCTGTAATGGGTTTAACCTTTCCCAGAATTGGACATAAAGAATGACTACGATGAGAAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCTGTGGCTGCTGTATCTaGCTGGTCACCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPCGCCI*LVTRQP
Trigger: GGGCTGCCTGGTGACCAGGCAGATACAGCAGCCACA...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCGGGCTGCCACAGTGTTaGGGTCCACAGTCACTTCCC +
Preference number: 4 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPGLPQC*GPQSLP
Trigger: GGGAAGTGACTGTGGACCCCAACACTGTGGCAGCCC...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGACACAGCGGTCCAGGTaGGCCCCCAGCCTCGCACTC +
Preference number: 4 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKTQRSR*APSLAL
Trigger: GAGTGCGAGGCTGGGGGCTCACCTGGACCGCTGTGT...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCAGAGAGCAGCTCTTGTaGCTGCTGTATCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPREQLL*LLYLPG
Trigger: ACCAGGCAGATACAGCAGCCACAAGAGCTGCTCTCT...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCCGGTTGCTCTTGGGGTaGATGCACACTGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPRLLLG*MHTVSD
Trigger: GTCAGAAACAGTGTGCATCCACCCCAAGAGCAACCG...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCGTGTGTCTTGCAAAGTaGGCACCTTGCTCATCATGC +
Preference number: 4 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPVCLAK*APCSSC
Trigger: GCATGATGAGCAAGGTGCTCACTTTGCAAGACACAC...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCTGCATCACCTGGTCTTaGCAAAGTACCTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPCITWS*QSTSRA
Trigger: GGCTCTAGAGGTACTTTGGCAAGACCAGGTGATGCA...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGACCAGGCAGCCCTCTTaGACTCCAGTCCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKTRQPS*TPVPGI
Trigger: GATGCCAGGGACTGGAGTTCAAGAGGGCTGCCTGGT...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCTTCCCATCCCTTTTCTaGACCGTCACCATAATGAGG +
Preference number: 4 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPFPSLF*TVTIMR
Trigger: CCTCATTATGGTGACGGTTCAGAAAAGGGATGGGAA...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp TGGAAGCACACCAGAGCCAATCATGACTCAGGCCTGTCTAGATGTTTAGATGTCCGAGCAGGATCCCAGTaGCCAAGAACAAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: WKHTRANHDSGLSRCLDVRAGSQ*PRTRWR
Trigger: GCGCCATCTTGTTCTTGGTCACTGGGATCCTGCTCG...GACATCTAAACATCTAGACAGGCCTGAGTCATGATTGGCTCTGGTGTGCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGTTCCGGAAAGTCTTCTaGTTCGGCCACCCGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GNNQHHIEETDGRSQISMFRKVF*FGHPVR
Trigger: CCGCACCGGGTGGCCGAAGCAGAAGACTTTCCGGAA...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCGAGAAGAGTTTGTGCTaGATGAGGCAAGAGTTCACA +
Preference number: 4 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPEKSLC*MRQEFT
Trigger: TGTGAACTCTTGCCTCATGCAGCACAAACTCTTCTC...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGGCTGCTGTATCTGCCTaGTCACCAGGCAGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKAAVSA*SPGSPL
Trigger: AAGAGGGCTGCCTGGTGACCAGGCAGATACAGCAGC...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCGTTATAGCAGTCATGTaGGTAAAAGCAACCATGGCC +
Preference number: 4 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPVIAVM*VKATMA
Trigger: GGCCATGGTTGCTTTTACCCACATGACTGCTATAAC...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGTGCCTTGCCTCTTGCTaGTGGTGTGAGAACCAGCAG +
Preference number: 4 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKCLASC*WCENQQ
Trigger: CTGCTGGTTCTCACACCAGCAGCAAGAGGCAAGGCA...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGCTCCATCTCCCGGGCTaGCACAGTGTTGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRLHLPG*HSVGVH
Trigger: GTGGACCCCAACACTGTGGCAGCCCGGGAGATGGAG...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGGCAAGTGATACAGCCTaGGAGGCACAGTCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKASDTA*EAQSPK
Trigger: TTTTGGGGACTGTGCCTCGCAGGCTGTATCACTTGC...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCTCTTTCTTTCTTATATaGCATTTGTTTGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPSFFLI*HLFGAW
Trigger: CCAGGCTCCAAACAAATGTCATATAAGAAAGAAAGA...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGTGCTCTTGGGGTGGATaGACACTGTTTCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKCSWGG*TLFLTA
Trigger: TGCTGTCAGAAACAGTGTGCATCCACCCCAAGAGCA...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGGTGGAGAAGTCCTGGTaGAAAGGCATCTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GNNQHHIEETDGRSQISMVEKSW*KGIWLK
Trigger: CTTCAGCCAGATGCCTTTCCACCAGGACTTCTCCAC...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTAGGTAGTGGAGCTCCATaGGAGCTAGTCAGACATCCC +
Preference number: 4 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLGSGAP*ELVRHP
Trigger: GGGATGTCTGACTAGCTCTCATGGAGCTCCACTACC...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTATTGGCCTACAGCAAGTaGTACAGCCTGCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLLAYSK*YSLRGT
Trigger: TGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAA...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp TGGAAGCACACCAGAGCCAATCATGACTCAGGCCTGTCTAGATGTTTAGATGTCAGAGTTTGTGCTGCATaGGGCAAGAGTTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: WKHTRANHDSGLSRCLDVRVCAA*GKSSQL
Trigger: CAACTGTGAACTCTTGCCTCATGCAGCACAAACTCT...GACATCTAAACATCTAGACAGGCCTGAGTCATGATTGGCTCTGGTGTGCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTGGCGGTCTGTCACTGTaGACACCCAGTGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: IVCPMSIECITWSCQSTSGGLSL*TPSVCL
Trigger: AAGACACACACTGGGTGTTCACAGTGACAGACCGCC...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TTTGCCAAAGTCACCCATGTATTCCACAGTTGTCCACAACACCACAAACTTCAGGGCATGTGCCAGCACTaGTCCAATTGGGTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: FAKVTHVFHSCPQHHKLQGMCQH*SNWVPK
Trigger: TTTAGGGACCCAATTGGACCAGTGCTGGCACATGCC...CTGAAGTTTGTGGTGTTGTGGACAACTGTGGAATACATGGGTGACTTTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGATTATGCCCTTTTGCTaGTGGCGAGCTCCGGTTCCG +
Preference number: 4 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRIMPFC*WRAPVP
Trigger: CGGAACCGGAGCTCGCCATCAGCAAAAGGGCATAAT...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp GATCCTGGTAACACAATCATGGAAGTTACAACAACTCTTAGAGCACAGGTTGGAGGACGATGTAAGAGATaGTCACGAGCAGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: DPGNTIMEVTTTLRAQVGGRCKR*SRAGSQ
Trigger: CTGGGATCCTGCTCGTGATCATCTCTTACATCGTCC...TCCAACCTGTGCTCTAAGAGTTGTTGTAACTTCCATGATTGTGTTACCAGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGAGAGTTCACAGTTGCTaGATGACATCTAGACCACTG +
Preference number: 4 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKRVHSC*MTSRPL
Trigger: CAGTGGTCTAGATGTCATTCAGCAACTGTGAACTCT...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTAATTGGGCCACACTGCTaGAAGACGAGCTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLIGPHC*KTSCLL
Trigger: GAGAAGACAGCTCGTCTTTCAGCAGTGTGGCCCAAT...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGTCAGAAATTGTACCTTaGAGGGCATGTGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: GNNQHHIEETDGRSQISMSEIVP*RACAST
Trigger: AGTGCTGGCACATGCCCTTCAAGGTACAATTTCTGA...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp TTTTTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTTGTTTCCCTTCCATCTCGGTTaGTCTTGGGGTGGATGCACA +
Preference number: 4 (lower is better)
Translates to: FLTHSSDLLTQQIVSFLFPFHLG*SWGGCT
Trigger: TGTGCATCCACCCCAAGAGCAACCGAGATGGAAGGG...AAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTACCTTGAAGGGCATGTaGCAGCACTGGTCCAATTGG +
Preference number: 4 (lower is better)
Translates to: IVCPMSIECITWSCQSTSTLKGM*QHWSNW
Trigger: CCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TTTGCCAAAGTCACCCATGTATTCCACAGTTGTCCACAACACCACAAACTTCAGTTTAAGAGCTCCCAATaGGTGGGAAGGACACACAGC +
Preference number: 4 (lower is better)
Translates to: FAKVTHVFHSCPQHHKLQFKSSQ*VGRTHS
Trigger: GCTGTGTGTCCTTCCCACCCATTGGGAGCTCTTAAA...CTGAAGTTTGTGGTGTTGTGGACAACTGTGGAATACATGGGTGACTTTGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp AAGGATAGGTGTGGCTGGTTGTGGTTTCTTATACATCTTACATGGCTTTTCTTCCCAAGCTCCCCAGGGTaGTTATGCCCTTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: KDRCGWLWFLIHLTWLFFPSSPG*LCPFAD
Trigger: ATCAGCAAAAGGGCATAATCACCCTGGGGAGCTTGG...GAAGAAAAGCCATGTAAGATGTATAAGAAACCACAACCAGCCACACCTATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTCAACCAGCACCATATTaGAGAGACAGACGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: IVCPMSIECITWSCQSTSQPAPY*RDRRKV
Trigger: GACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTG...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGAGGGAGAGCTGTTCCTaGAACACAGGAGAGTTACCC +
Preference number: 4 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRRESCS*NTGELP
Trigger: GGGTAACTCTCCTGTGTTTCAGGAACAGCTCTCCCT...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGAAATTAACAGCACGATaGGAACCACAGGGTACAAAC +
Preference number: 4 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKKLTAR*EPQGTN
Trigger: GTTTGTACCCTGTGGTTCTCATCGTGCTGTTAATTT...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp TGGAAGCACACCAGAGCCAATCATGACTCAGGCCTGTCTAGATGTTTAGATGTCTTAGAGAAGAGTTTGTaGTGCATGAGGCAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: WKHTRANHDSGLSRCLDVLEKSL*CMRQEF
Trigger: GAACTCTTGCCTCATGCAGCACAAACTCTTCTCTAA...GACATCTAAACATCTAGACAGGCCTGAGTCATGATTGGCTCTGGTGTGCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp TGGAAGCACACCAGAGCCAATCATGACTCAGGCCTGTCTAGATGTTTAGATGTCTTACTTCCTCATTCCTaGTGTCTCATACCAATTCCC +
Preference number: 4 (lower is better)
Translates to: WKHTRANHDSGLSRCLDVLLPHS*CLIPIP
Trigger: GGGAATTGGTATGAGACAGCAGGAATGAGGAAGTAA...GACATCTAAACATCTAGACAGGCCTGAGTCATGATTGGCTCTGGTGTGCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGAAGGACACACAGCGCTaGAAAGAAAACTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKKDTQR*KENSLQ
Trigger: TTGCAAAGAGTTTTCTTTGCAGCGCTGTGTGTCCTT...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTTGAACTCCAGTCCCTaGCATCACAGAGGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRLNSSP*HHRGLP
Trigger: AGGCAGACCTCTGTGATGCCAGGGACTGGAGTTCAA...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTACATCTCGGTTGCTCTTaGGGTGGATGCACACTGTTT +
Preference number: 4 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLHLGCS*GGCTLF
Trigger: AAACAGTGTGCATCCACCCCAAGAGCAACCGAGATG...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTGCTCCCCCTTCCACATaGACATCATTAACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: IVCPMSIECITWSCQSTSAPPST*TSLTSR
Trigger: CCTGCTTGTTAATGATGTCCATGTGGAAGGGGGAGC...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TGGAAGCACACCAGAGCCAATCATGACTCAGGCCTGTCTAGATGTTTAGATGTCCAGCACTGGTCCAATTaGGTCCCTAAAACAAATAAG +
Preference number: 4 (lower is better)
Translates to: WKHTRANHDSGLSRCLDVQHWSN*VPKTNK
Trigger: CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTG...GACATCTAAACATCTAGACAGGCCTGAGTCATGATTGGCTCTGGTGTGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTGGAAAGGCATCTGGCTaGAGAGTACTGTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: IVCPMSIECITWSCQSTSGKASG*RVLFCR
Trigger: TCTGCAAAACAGTACTCTTCAGCCAGATGCCTTTCC...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp TGGAAGCACACCAGAGCCAATCATGACTCAGGCCTGTCTAGATGTTTAGATGTCTGCACACGTGAAAGATaGAGACCAAAATGTTCACAT +
Preference number: 4 (lower is better)
Translates to: WKHTRANHDSGLSRCLDVCTRER*RPKCSH
Trigger: ATGTGAACATTTTGGTCTTCATCTTTCACGTGTGCA...GACATCTAAACATCTAGACAGGCCTGAGTCATGATTGGCTCTGGTGTGCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGACCCAGTGTGTGTCTTaGAAAGTGAGCACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRTQCVS*KVSTLL
Trigger: GAGCAAGGTGCTCACTTTGCAAGACACACACTGGGT...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp AAGGATAGGTGTGGCTGGTTGTGGTTTCTTATACATCTTACATGGCTTTTCTTCTCACAGAGGTCTGCCTaGTTGCTCTTCTTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: KDRCGWLWFLIHLTWLFFSQRSA*LLFLAR
Trigger: CCTTGCTAAGAAGAGCAACCAGGCAGACCTCTGTGA...GAAGAAAAGCCATGTAAGATGTATAAGAAACCACAACCAGCCACACCTATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp GATCCTGGTAACACAATCATGGAAGTTACAACAACTCTTAGAGCACAGGTTGGAGGAGGAGGGGGATGCTaGAGAAGAACTAAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: DPGNTIMEVTTTLRAQVGGGGGC*RRTKFR
Trigger: TCTAAACTTAGTTCTTCTCCAGCATCCCCCTCCTCC...TCCAACCTGTGCTCTAAGAGTTGTTGTAACTTCCATGATTGTGTTACCAGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTACACAGTCACTTCCCGTaGGACGATGTAAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLHSHFP*DDVRDD
Trigger: ATCATCTCTTACATCGTCCCACGGGAAGTGACTGTG...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGCAACATCATCCAAAGTaGATCCTTAAGCAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: GNNQHHIEETDGRSQISMQHHPK*ILKQAR
Trigger: TCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTG...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp AAGGATAGGTGTGGCTGGTTGTGGTTTCTTATACATCTTACATGGCTTTTCTTCTGTAACTCACCCCATTaGGCCACACTGCTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: KDRCGWLWFLIHLTWLFFCNSPH*ATLLKD
Trigger: GTCTTTCAGCAGTGTGGCCCAATGGGGTGAGTTACA...GAAGAAAAGCCATGTAAGATGTATAAGAAACCACAACCAGCCACACCTATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGTATATGACATTTGTTTaGAGCCTGGCTAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GNNQHHIEETDGRSQISMYMTFV*SLARKP
Trigger: AGGCTTCCTAGCCAGGCTCCAAACAAATGTCATATA...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp TTTTTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTTGTTTTCCGCTGCTCCAAGTTaGTGTTTTTGTCCACATAGG +
Preference number: 4 (lower is better)
Translates to: FLTHSSDLLTQQIVSFLFSAAPS*CFCPHR
Trigger: CCTATGTGGACAAAAACATCAACTTGGAGCAGCGGA...AAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATAGGACTGTTGCTACCATaGGGGAAGTGCTCGTTGCTT +
Preference number: 4 (lower is better)
Translates to: FANSTTNSLRCPKKNWLIGLLLP*GKCSLL
Trigger: AAGCAACGAGCACTTCCCTCATGGTAGCAACAGTCC...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp TTTTTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTTGTTTAGACCTCCTAACACTTaGTTCCCAAACTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLTHSSDLLTQQIVSFLFRPPNT*FPNSSS
Trigger: GGAAGAGGAGTTTGGGAATCAAGTGTTAGGAGGTCT...AAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTGGTCACAAATCTCCATaGAGGATGCAAGACCAAAAC +
Preference number: 4 (lower is better)
Translates to: IVCPMSIECITWSCQSTSGHKSP*RMQDQN
Trigger: GTTTTGGTCTTGCATCCTTCATGGAGATTTGTGACC...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp GATCCTGGTAACACAATCATGGAAGTTACAACAACTCTTAGAGCACAGGTTGGATCTTGCTGTAATAGGTaGACCACTGGCAAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: DPGNTIMEVTTTLRAQVGSCCNR*TTGKGC
Trigger: ACAACCTTTGCCAGTGGTTCACCTATTACAGCAAGA...TCCAACCTGTGCTCTAAGAGTTGTTGTAACTTCCATGATTGTGTTACCAGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp TTTGCCAAAGTCACCCATGTATTCCACAGTTGTCCACAACACCACAAACTTCAGTTTCTAATTCCTGGCTaGAGCAGTTACAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: FAKVTHVFHSCPQHHKLQFLIPG*SSYRLS
Trigger: GGAAAGTCTGTAACTGCTGCAGCCAGGAATTAGAAA...CTGAAGTTTGTGGTGTTGTGGACAACTGTGGAATACATGGGTGACTTTGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGAATCTCCATGAAGGATaGAAGACCAAAACTATAGGT +
Preference number: 4 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKNLHEG*KTKTIG
Trigger: ACCTATAGTTTTGGTCTTGCATCCTTCATGGAGATT...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTTGGTGGAAAGGCATCTaGCTGAAGAGTACTGTTTTG +
Preference number: 4 (lower is better)
Translates to: IVCPMSIECITWSCQSTSWWKGI*LKSTVL
Trigger: CAAAACAGTACTCTTCAGCCAGATGCCTTTCCACCA...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGCGTTCCGCTGTTATTTaGTTGTTCCCTGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRRSAVI*LFPEWR
Trigger: TCTCCACTCAGGGAACAACCAAATAACAGCGGAACG...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTGATATGGCAGCCTCTTaGGACCACTCATTTGGATTT +
Preference number: 4 (lower is better)
Translates to: IVCPMSIECITWSCQSTSDMAAS*DHSFGF
Trigger: AAATCCAAATGAGTGGTCCCAAGAGGCTGCCATATC...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGGAAGTGCTCGTTGCTTaGCCTACAGCAAGTGATACA +
Preference number: 4 (lower is better)
Translates to: IKTFTGNNQHHIEETDGREVLVA*PTASDT
Trigger: TGTATCACTTGCTGTAGGCCAAGCAACGAGCACTTC...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TTTTTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTTGTTTCATTTGTTTGGAGCCTaGCTAGGAAGCCTGAAGATG +
Preference number: 4 (lower is better)
Translates to: FLTHSSDLLTQQIVSFLFHLFGA*LGSLKM
Trigger: CATCTTCAGGCTTCCTAGCCAGGCTCCAAACAAATG...AAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATATATTTGGTTGTTCCCTaGGTGGAGAAGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FANSTTNSLRCPKKNWLIYLVVP*VEKSWW
Trigger: CCACCAGGACTTCTCCACTCAGGGAACAACCAAATA...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTTCACAGTTGCTGAATaGCATCTAGACCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRFTVAE*HLDHCE
Trigger: CTCACAGTGGTCTAGATGTCATTCAGCAACTGTGAA...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGACACAGTGGGGAGCATaGCGAAAAGCTGTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRTQWGA*RKAVLY
Trigger: ATAAAGAACAGCTTTTCGTCATGCTCCCCACTGTGT...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATAGAGCTCCGGTTCCGCTaGTCCAAGTTGATGTTTTTG +
Preference number: 4 (lower is better)
Translates to: FANSTTNSLRCPKKNWLIELRFR*SKLMFL
Trigger: CAAAAACATCAACTTGGAGCAGCGGAACCGGAGCTC...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTAGAACCATAGAGTTTTaGAGACTCTTTGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: IVCPMSIECITWSCQSTSRTIEF*RLFGRG
Trigger: GCCTCTTCCAAAGAGTCTGCAAAACTCTATGGTTCT...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp TTTGCCAAAGTCACCCATGTATTCCACAGTTGTCCACAACACCACAAACTTCAGCCCCAAAAGTCTAGCTaGAATTCTATTGGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FAKVTHVFHSCPQHHKLQPQKSS*NSIGGF
Trigger: AAAACCACCAATAGAATTGCAGCTAGACTTTTGGGG...CTGAAGTTTGTGGTGTTGTGGACAACTGTGGAATACATGGGTGACTTTGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATATGGTTGTTCCCTGAGTaGAGAAGTCCTGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FANSTTNSLRCPKKNWLIWLFPE*RSPGGK
Trigger: CTTTCCACCAGGACTTCTCCACTCAGGGAACAACCA...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp AAGGATAGGTGTGGCTGGTTGTGGTTTCTTATACATCTTACATGGCTTTTCTTCCAGATATCAAAGATATaGCAGCCTCTTGGGACCACT +
Preference number: 4 (lower is better)
Translates to: KDRCGWLWFLIHLTWLFFQISKI*QPLGTT
Trigger: AGTGGTCCCAAGAGGCTGCCATATCTTTGATATCTG...GAAGAAAAGCCATGTAAGATGTATAAGAAACCACAACCAGCCACACCTATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
3UTR CAA 72 bp AGAGCTCATCCACATAAATATCCTGATTCACACATTTaGCCAAAGTCACCCATGTATTCCACAGTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RAHPHKYPDSHI*PKSPMYSTVVH
Trigger: GTGGACAACTGTGGAATACATGGGTGACTTTGGCAAAATGTGTGAATCAGGATATTTATGTGGATGAGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTACATCTAGCTTCCTCTaGTGGCCATATAATTTCTCA +
Preference number: 4 (lower is better)
Translates to: IVCPMSIECITWSCQSTSTSSFL*WPYNFS
Trigger: TGAGAAATTATATGGCCATCAGAGGAAGCTAGATGT...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp AAGGATAGGTGTGGCTGGTTGTGGTTTCTTATACATCTTACATGGCTTTTCTTCATTAAGGCAAGTATCTaGATAATGTCACCACAGCCC +
Preference number: 4 (lower is better)
Translates to: KDRCGWLWFLIHLTWLFFIKASI*IMSPQP
Trigger: GGGCTGTGGTGACATTATTCAGATACTTGCCTTAAT...GAAGAAAAGCCATGTAAGATGTATAAGAAACCACAACCAGCCACACCTATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTAGTACATCTTATTATGTaGTCTGCTTTAAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLVHLIM*SALRAP
Trigger: GGGAGCTCTTAAAGCAGATCACATAATAAGATGTAC...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp TTTTTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTTGTTTCCAATGTCTATAGAATaGATCACCTGGTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: FLTHSSDLLTQQIVSFLFPMSIE*ITWSCQ
Trigger: TTGGCAAGACCAGGTGATGCATTCTATAGACATTGG...AAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATATTGGGACCACTCATTTaGATTTTCCCAGCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: FANSTTNSLRCPKKNWLILGPLI*IFPAKL
Trigger: GAGCTTGGCTGGGAAAATCCAAATGAGTGGTCCCAA...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp AAGGATAGGTGTGGCTGGTTGTGGTTTCTTATACATCTTACATGGCTTTTCTTCACTTCCCTGAAGACGTaGCTTCTGAACTTGTATCAT +
Preference number: 4 (lower is better)
Translates to: KDRCGWLWFLIHLTWLFFTSLKT*LLNLYH
Trigger: ATGATACAAGTTCAGAAGCCACGTCTTCAGGGAAGT...GAAGAAAAGCCATGTAAGATGTATAAGAAACCACAACCAGCCACACCTATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp GATCCTGGTAACACAATCATGGAAGTTACAACAACTCTTAGAGCACAGGTTGGACTGCAATTCTATTGGTaGTTTTCCCCAAACAGCAAT +
Preference number: 4 (lower is better)
Translates to: DPGNTIMEVTTTLRAQVGLQFYW*FSPNSN
Trigger: ATTGCTGTTTGGGGAAAACCACCAATAGAATTGCAG...TCCAACCTGTGCTCTAAGAGTTGTTGTAACTTCCATGATTGTGTTACCAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp AAGGATAGGTGTGGCTGGTTGTGGTTTCTTATACATCTTACATGGCTTTTCTTCAAGCTGTTCTTTATATaGGGGGCCAGTACATCTTAT +
Preference number: 4 (lower is better)
Translates to: KDRCGWLWFLIHLTWLFFKLFFI*GASTSY
Trigger: ATAAGATGTACTGGCCCCTCATATAAAGAACAGCTT...GAAGAAAAGCCATGTAAGATGTATAAGAAACCACAACCAGCCACACCTATCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGATATTTGTGGGAGGCTaGACAACCAAAACAGGTTTA +
Preference number: 4 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRIFVGG*TTKTGL
Trigger: TAAACCTGTTTTGGTTGTTCAGCCTCCCACAAATAT...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTACTGATTCACACATTTTaGCAAAGTCACCCATGTATT +
Preference number: 4 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLLIHTF*QSHPCI
Trigger: AATACATGGGTGACTTTGGCAAAATGTGTGAATCAG...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TTTTTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTTGTTTGTTTTGCAGACTCTTTaGAAGAGGCAAATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FLTHSSDLLTQQIVSFLFVLQTL*KRQICF
Trigger: GAAACAGATTTGCCTCTTCCAAAGAGTCTGCAAAAC...AAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR TCA 90 bp AAGGATAGGTGTGGCTGGTTGTGGTTTCTTATACATCTTACATGGCTTTTCTTCATGGATAAGCACCTTTaGGAATTAGATGTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: KDRCGWLWFLIHLTWLFFMDKHL*ELDVSL
Trigger: AAGGCTTACATCTAATTCTCAAAGGTGCTTATCCAT...GAAGAAAAGCCATGTAAGATGTATAAGAAACCACAACCAGCCACACCTATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGACTAACAGTTTAAGGTaGCCTAAAAAGAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRTNSLR*PKKNWL
Trigger: AAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGT...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATACTGGCACCAACACTGTaGTTTAAATTCACATTGGTC +
Preference number: 4 (lower is better)
Translates to: FANSTTNSLRCPKKNWLILAPTL*FKFTLV
Trigger: GACCAATGTGAATTTAAACCACAGTGTTGGTGCCAG...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATAATAGAATGCATCACCTaGTCTTGCCAAAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: FANSTTNSLRCPKKNWLIIECIT*SCQSTS
Trigger: AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTAT...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTCTTTATGTCCAATTCTaGGAAAGGTTAAACCCATTA +
Preference number: 4 (lower is better)
Translates to: IVCPMSIECITWSCQSTSLYVQF*ERLNPL
Trigger: TAATGGGTTTAACCTTTCCCAGAATTGGACATAAAG...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CCA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATAAGGTGTGGCTGGTTGTaGTTTCTTATACATCTTACA +
Preference number: 4 (lower is better)
Translates to: FANSTTNSLRCPKKNWLIRCGWL*FLIHLT
Trigger: TGTAAGATGTATAAGAAACCACAACCAGCCACACCT...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR GCA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATATCTTATTATGTGATCTaGTTTAAGAGCTCCCAATGG +
Preference number: 4 (lower is better)
Translates to: FANSTTNSLRCPKKNWLISYYVI*FKSSQW
Trigger: CCATTGGGAGCTCTTAAAGCAGATCACATAATAAGA...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCCCATCTCGGTTGCTCTaGGGGTGGATGCACACTGTT +
Preference number: 5 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPPSRLL*GWMHTV
Trigger: AACAGTGTGCATCCACCCCAAGAGCAACCGAGATGG...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS GCA 90 bp TCATTCACTGTCAGGTGCTATGGTTTTCCTTGGCCTGCCTCTGCCTaGATGGCAACTCACCGTCCAGAGCCTTTCCACTTGGCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: SFTVRCYGFPWPASA*MATHRPEPFHLAWA
Trigger: AGCCCAAGCCAAGTGGAAAGGCTCTGGACGGTGAGTTGCCATGCAGGCAGAGGCAGGCCAAGGAAAACCATAGCACCTGACAGTGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS-3UTR CAA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCAAAATGTCTCATGCCTaGCCTCTTGCTGCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPKMSHA*PLAAGV
Trigger: CACACCAGCAGCAAGAGGCAAGGCATGAGACATTTT...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS TCA 90 bp TGGTTGTTCCCTGAGTGGAGAAGTCCTGGTGGAAAGGCATCTGGCTaGAGAGTACTGTTTTGCAGAGAGGAGGAGGGGGATGCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: WLFPEWRSPGGKASG*RVLFCREEEGDAGE
Trigger: TTCTCCAGCATCCCCCTCCTCCTCTCTGCAAAACAGTACTCTTCAGCCAGATGCCTTTCCACCAGGACTTCTCCACTCAGGGAACAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS GCA 90 bp GGGGGATGCTGGAGAAGAACTAAGTTTAGACCCTTCCATCTCGGTTaGTCTTGGGGTGGATGCACACTGTTTCTGACAGCAGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GGCWRRTKFRPFHLG*SWGGCTLFLTAESS
Trigger: GCTGCTCTCTGCTGTCAGAAACAGTGTGCATCCACCCCAAGAGCAACCGAGATGGAAGGGTCTAAACTTAGTTCTTCTCCAGCATCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCTCCGCTGTTATTTGGTaGTTCCCTGAGTGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPSAVIW*FPEWRS
Trigger: ACTTCTCCACTCAGGGAACAACCAAATAACAGCGGA...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp AAGTGCTCGTTGCTTGGCCTACAGCAAGTGATACAGCCTGCGAGGCACAGTCCCAAGGCACACATAAGTTaGGCAGCGCAGTCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: KCSLLGLQQVIQPARHSPKAHIS*AAQSLF
Trigger: GAAAAGAGACTGCGCTGCCAAACTTATGTGTGCCTT...GGGACTGTGCCTCGCAGGCTGTATCACTTGCTGTAGGCCAAGCAACGAGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGCACCAGGCAGCCCTCTaGAACTCCAGTCCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: GNNQHHIEETDGRSQISMHQAAL*NSSPWH
Trigger: ATGCCAGGGACTGGAGTTCAAGAGGGCTGCCTGGTG...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp TGGAAGCACACCAGAGCCAATCATGACTCAGGCCTGTCTAGATGTTTAGATGTCACCCTTCCATCTCGGTaGCTCTTGGGGTGGATGCAC +
Preference number: 5 (lower is better)
Translates to: WKHTRANHDSGLSRCLDVTLPSR*LLGWMH
Trigger: GTGCATCCACCCCAAGAGCAACCGAGATGGAAGGGT...GACATCTAAACATCTAGACAGGCCTGAGTCATGATTGGCTCTGGTGTGCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS GCA 90 bp AAGATGACTTTCATTCACTGTCAGGTGCTATGGTTTTCCTTGGCCTaGCTCTGCCTGCATGGCAACTCACCGTCCAGAGCCTTTCCACTT +
Preference number: 5 (lower is better)
Translates to: KMTFIHCQVLWFSLA*LCLHGNSPSRAFPL
Trigger: AAGTGGAAAGGCTCTGGACGGTGAGTTGCCATGCAGGCAGAGGCAGGCCAAGGAAAACCATAGCACCTGACAGTGAATGAAAGTCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CCA 90 bp TGGAGGATATACTCCAAGATGACTTTCATTCACTGTCAGGTGCTATaGTTTTCCTTGGCCTGCCTCTGCCTGCATGGCAACTCACCGTCC +
Preference number: 5 (lower is better)
Translates to: WRIYSKMTFIHCQVL*FSLACLCLHGNSPS
Trigger: GGACGGTGAGTTGCCATGCAGGCAGAGGCAGGCCAAGGAAAACCATAGCACCTGACAGTGAATGAAAGTCATCTTGGAGTATATCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS-3UTR CAA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTCGGGCTGCCACAGTGTaGGGGTCCACAGTCACTTCC +
Preference number: 5 (lower is better)
Translates to: IVCPMSIECITWSCQSTSRAATV*GSTVTS
Trigger: GGAAGTGACTGTGGACCCCAACACTGTGGCAGCCCG...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS TCA 90 bp GCAGCAGTTACAGACTTTCCGTTCCGCTGTTATTTGGTTGTTCCCTaGGTGGAGAAGTCCTGGTGGAAAGGCATCTGGCTGAAGAGTACT +
Preference number: 5 (lower is better)
Translates to: AAVTDFPFRCYLVVP*VEKSWWKGIWLKST
Trigger: AGTACTCTTCAGCCAGATGCCTTTCCACCAGGACTTCTCCACTCAGGGAACAACCAAATAACAGCGGAACGGAAAGTCTGTAACTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS GCA 90 bp AACTCACCGTCCAGAGCCTTTCCACTTGGCTTGGGCTTCTCACAGTaGAGTAATCTTGGGGTAATCACATTTCTTGCATGTGATCACACT +
Preference number: 5 (lower is better)
Translates to: NSPSRAFPLGLGFSQ*SNLGVITFLACDHT
Trigger: AGTGTGATCACATGCAAGAAATGTGATTACCCCAAGATTACTGCACTGTGAGAAGCCCAAGCCAAGTGGAAAGGCTCTGGACGGTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CCA 90 bp GACTGGGTGGTTTGTCTTTTATCCCTATGGTGTCAGCTGAGGCAGTaGGACTGGAGGATATACTCCAAGATGACTTTCATTCACTGTCAG +
Preference number: 5 (lower is better)
Translates to: DWVVCLLSLWCQLRQ*DWRIYSKMTFIHCQ
Trigger: CTGACAGTGAATGAAAGTCATCTTGGAGTATATCCTCCAGTCCCACTGCCTCAGCTGACACCATAGGGATAAAAGACAAACCACCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS-3UTR CAA 90 bp TCTTGTTTCAACATCATCCAAAGTGGATCCTTAAGCAGGCTAGAGCTGGACTTAAGCAGAGAGCAGCTCTaGTGGCTGCTGTATCTGCCT +
Preference number: 5 (lower is better)
Translates to: SCFNIIQSGSLSRLELDLSREQL*WLLYLP
Trigger: AGGCAGATACAGCAGCCACAAGAGCTGCTCTCTGCT...TAAGTCCAGCTCTAGCCTGCTTAAGGATCCACTTTGGATGATGTTGAAACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGACCACGAGTACACTCTaGAGTGTAAGCCACAGATTC +
Preference number: 5 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKTTSTL*SVSHRF
Trigger: GAATCTGTGGCTTACACTCAAGAGTGTACTCGTGGT...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGGGTGATTATGCCCTTTaGCTGATGGCGAGCTCCGGT +
Preference number: 5 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRGDYAL*LMASSG
Trigger: ACCGGAGCTCGCCATCAGCAAAAGGGCATAATCACC...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp ACCTTGAAGGGCATGTGCCAGCACTGGTCCAATTGGGTCCCTAAAACAAATAAGCTAGCTGCAATTCTATaGGTGGTTTTCCCCAAACAG +
Preference number: 5 (lower is better)
Translates to: TLKGMCQHWSNWVPKTNKLAAIL*VVFPKQ
Trigger: CTGTTTGGGGAAAACCACCAATAGAATTGCAGCTAG...CTTATTTGTTTTAGGGACCCAATTGGACCAGTGCTGGCACATGCCCTTCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTCACCCAGTGTGTGTCTaGCAAAGTGAGCACCTTGCT +
Preference number: 5 (lower is better)
Translates to: IVCPMSIECITWSCQSTSHPVCV*QSEHLA
Trigger: AGCAAGGTGCTCACTTTGCAAGACACACACTGGGTG...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CCA 90 bp TGGCTTCTGAACTTGTATCATCCTCCTCTTCAGATATCAAAGATATaGCAGCCTCTTGGGACCACTCATTTGGATTTTCCCAGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: WLLNLYHPPLQISKI*QPLGTTHLDFPSQA
Trigger: AGCTTGGCTGGGAAAATCCAAATGAGTGGTCCCAAGAGGCTGCCATATCTTTGATATCTGAAGAGGAGGATGATACAAGTTCAGAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp TGGAAGCACACCAGAGCCAATCATGACTCAGGCCTGTCTAGATGTTTAGATGTCCCTGATTCACACATTTaGCCAAAGTCACCCATGTAT +
Preference number: 5 (lower is better)
Translates to: WKHTRANHDSGLSRCLDVPDSHI*PKSPMY
Trigger: ATACATGGGTGACTTTGGCAAAATGTGTGAATCAGG...GACATCTAAACATCTAGACAGGCCTGAGTCATGATTGGCTCTGGTGTGCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGCTTGGGACCACTCATTaGGATTTTCCCAGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRLGTTH*DFPSQA
Trigger: AGCTTGGCTGGGAAAATCCAAATGAGTGGTCCCAAG...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTCTCTTAGAGAAGAGTTaGTGCTGCATGAGGCAAGAG +
Preference number: 5 (lower is better)
Translates to: IVCPMSIECITWSCQSTSLLEKS*CCMRQE
Trigger: CTCTTGCCTCATGCAGCACAAACTCTTCTCTAAGAG...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp TGGAAGCACACCAGAGCCAATCATGACTCAGGCCTGTCTAGATGTTTAGATGTCAGCCAAAAACACTCTTaGTCAGATTGGGAAAAACAG +
Preference number: 5 (lower is better)
Translates to: WKHTRANHDSGLSRCLDVSQKHS*SDWEKQ
Trigger: CTGTTTTTCCCAATCTGACAAAGAGTGTTTTTGGCT...GACATCTAAACATCTAGACAGGCCTGAGTCATGATTGGCTCTGGTGTGCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp TGGAAGCACACCAGAGCCAATCATGACTCAGGCCTGTCTAGATGTTTAGATGTCCAAATGCACATAGACTaGAGTGCACATAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: WKHTRANHDSGLSRCLDVQMHID*SAHKSA
Trigger: TGCAGATTTATGTGCACTCAAGTCTATGTGCATTTG...GACATCTAAACATCTAGACAGGCCTGAGTCATGATTGGCTCTGGTGTGCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS TCA 90 bp TTTATTGTACTCATGGTTTTGGAGGTAAGGAACTCAGGAATAGCTTaGCTGGGTGGTTTGTCTTTTATCCCTATGGTGTCAGCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: FIVLMVLEVRNSGIA*LGGLSFIPMVSAEA
Trigger: TGCCTCAGCTGACACCATAGGGATAAAAGACAAACCACCCAGTCAAGCTATTCCTGAGTTCCTTACCTCCAAAACCATGAGTACAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS GCA 90 bp CTTGGGGTAATCACATTTCTTGCATGTGATCACACTTCAACCCTGTaGTTTATTGGTCAAAATAATCACAGGGCCTCCCAGATTCAAGGA +
Preference number: 5 (lower is better)
Translates to: LGVITFLACDHTSTL*FIGQNNHRASQIQG
Trigger: TCCTTGAATCTGGGAGGCCCTGTGATTATTTTGACCAATAAAGCACAGGGTTGAAGTGTGATCACATGCAAGAAATGTGATTACCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS-3UTR CAA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGAGATATGGCAGCCTCTaGGGACCACTCATTTGGATT +
Preference number: 5 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRRYGSL*GPLIWI
Trigger: AATCCAAATGAGTGGTCCCAAGAGGCTGCCATATCT...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp TTTTTAACACACAGCTCAGACCTACTCACTCAGCAGATCGTTTCCTTCTTGTTTACGTGGCTTCTGAACTaGTATCATCCTCCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: FLTHSSDLLTQQIVSFLFTWLLN*YHPPLQ
Trigger: CTGAAGAGGAGGATGATACAAGTTCAGAAGCCACGT...AAACAAGAAGGAAACGATCTGCTGAGTGAGTAGGTCTGAGCTGTGTGTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTCCATGTATTCCACAGTaGTCCACAACACCACAAACT +
Preference number: 5 (lower is better)
Translates to: IVCPMSIECITWSCQSTSPCIPQ*STTPQT
Trigger: AGTTTGTGGTGTTGTGGACAACTGTGGAATACATGG...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp ATAAAAACTTTCACAGGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGACAACCAGCACCATATaGAAGAGACAGACGGAAGGT +
Preference number: 5 (lower is better)
Translates to: IKTFTGNNQHHIEETDGRTTSTI*KRQTEG
Trigger: ACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGT...CCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACCTGTGAAAGTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp GGTAACAACCAGCACCATATTGAAGAGACAGACGGAAGGTCACAAATCTCCATGAATCTGACCTTCAGGTaGAAAAACCTTCTCCTAAGA +
Preference number: 5 (lower is better)
Translates to: GNNQHHIEETDGRSQISMNLTFR*KNLLLR
Trigger: TCTTAGGAGAAGGTTTTTCAACCTGAAGGTCAGATT...CATGGAGATTTGTGACCTTCCGTCTGTCTCTTCAATATGGTGCTGGTTGTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp GATCCTGGTAACACAATCATGGAAGTTACAACAACTCTTAGAGCACAGGTTGGAAAGAACCATAGAGTTTaGCAGACTCTTTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: DPGNTIMEVTTTLRAQVGKNHRV*QTLWKR
Trigger: CCTCTTCCAAAGAGTCTGCAAAACTCTATGGTTCTT...TCCAACCTGTGCTCTAAGAGTTGTTGTAACTTCCATGATTGTGTTACCAGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTGATAGGTGTGGCTGGTaGTGGTTTCTTATACATCTT +
Preference number: 5 (lower is better)
Translates to: IVCPMSIECITWSCQSTSDRCGW*WFLIHL
Trigger: AAGATGTATAAGAAACCACAACCAGCCACACCTATC...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp GATCCTGGTAACACAATCATGGAAGTTACAACAACTCTTAGAGCACAGGTTGGATCTGAGCCTCCCTTTTaGTATTTCAGTTCAACCCTT +
Preference number: 5 (lower is better)
Translates to: DPGNTIMEVTTTLRAQVGSEPPF*YFSSTL
Trigger: AAGGGTTGAACTGAAATACAAAAAGGGAGGCTCAGA...TCCAACCTGTGCTCTAAGAGTTGTTGTAACTTCCATGATTGTGTTACCAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp ATTGTATGCCCAATGTCTATAGAATGCATCACCTGGTCTTGCCAAAGTACCTCTGCACATGGCTTTTCTTaGCCTGTGTTACCATCATTT +
Preference number: 5 (lower is better)
Translates to: IVCPMSIECITWSCQSTSAHGFS*PVLPSF
Trigger: AAATGATGGTAACACAGGCAAAGAAAAGCCATGTGC...AGAGGTACTTTGGCAAGACCAGGTGATGCATTCTATAGACATTGGGCATACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CCA 90 bp TTCAAGGAAGTGAAGAAATACACTCCAGCTTTTGATGTTCAGAATTaGACAAGGTCACATGACAGGAGAGCATGCAGAATGTGTATCATT +
Preference number: 5 (lower is better)
Translates to: FKEVKKYTPAFDVQN*TRSHDRRACRMCII
Trigger: AATGATACACATTCTGCATGCTCTCCTGTCATGTGACCTTGTCCAATTCTGAACATCAAAAGCTGGAGTGTATTTCTTCACTTCCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS TCA 90 bp AATGGCCTTGAATTTAGTTTAAAGTCGAACTTCTTAAGACACTTATaGCGTTTTCAGTTTGGCTCTTCACTTTCAGGTGGCATCAATCCC +
Preference number: 5 (lower is better)
Translates to: NGLEFSLKSNFLRHL*RFQFGSSLSGGINP
Trigger: GGGATTGATGCCACCTGAAAGTGAAGAGCCAAACTGAAAACGTCATAAGTGTCTTAAGAAGTTCGACTTTAAACTAAATTCAAGGCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS-3UTR CAA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATAAACCTCCAGGCAGAGTaGCAAAATGTAAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: FANSTTNSLRCPKKNWLINLQAE*QNVRYF
Trigger: GAAATACCTTACATTTTGCAACTCTGCCTGGAGGTT...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp AAGGATAGGTGTGGCTGGTTGTGGTTTCTTATACATCTTACATGGCTTTTCTTCTGCAAAGAAAACTCTTaGCAAACTCTACCACTAACA +
Preference number: 5 (lower is better)
Translates to: KDRCGWLWFLIHLTWLFFCKENS*QTLPLT
Trigger: TGTTAGTGGTAGAGTTTGCAAAGAGTTTTCTTTGCA...GAAGAAAAGCCATGTAAGATGTATAAGAAACCACAACCAGCCACACCTATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS-3UTR CAA 90 bp TTTGCAAACTCTACCACTAACAGTTTAAGGTGCCCTAAAAAGAACTGGCTTATAATCAAGGCAAGTAACTaGATAGAACAGAATCAAGGG +
Preference number: 5 (lower is better)
Translates to: FANSTTNSLRCPKKNWLIIKASN*IEQNQG
Trigger: CCCTTGATTCTGTTCTATCAAGTTACTTGCCTTGAT...TATAAGCCAGTTCTTTTTAGGGCACCTTAAACTGTTAGTGGTAGAGTTTGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS TCA 90 bp TGCGCAATTAGATTCTGGTCTCTGGTCCACCTGATAACTATAAAATaGTGGCCTGTTGGTGTTATGGTAAACTATTCTTTGATTAAATTG +
Preference number: 5 (lower is better)
Translates to: CAIRFWSLVHLITIK*WPVGVMVNYSLIKL
Trigger: CAATTTAATCAAAGAATAGTTTACCATAACACCAACAGGCCATCATTTTATAGTTATCAGGTGGACCAGAGACCAGAATCTAATTGCGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS GCA 72 bp GCAGCTTCCGGAAAGTCTTCTGCTTCGGCCACCCGGTaGGGCTCCAGCACCGCGCGCTCTCCCGGCACGGTT +
Preference number: 6 (lower is better)
Translates to: AASGKSSASATR*GSSTARSPGTV
Trigger: AACCGTGCCGGGAGAGCGCGCGGTGCTGGAGCCGCACCGGGTGGCCGAAGCAGAAGACTTTCCGGAAGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CAA 72 bp TGGCTGCTGTATCTGCCTGGTCACCAGGCAGCCCTCTaGAACTCCAGTCCCTGGCATCACAGAGGTCTGCCT +
Preference number: 6 (lower is better)
Translates to: WLLYLPGHQAAL*NSSPWHHRGLP
Trigger: AGGCAGACCTCTGTGATGCCAGGGACTGGAGTTCAAGAGGGCTGCCTGGTGACCAGGCAGATACAGCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS TCA 72 bp CCAGCCAAGCTCCCCAGGGTGATTATGCCCTTTTGCTaGTGGCGAGCTCCGGTTCCGCTGCTCCAAGTTGAT +
Preference number: 6 (lower is better)
Translates to: PAKLPRVIMPFC*WRAPVPLLQVD
Trigger: ATCAACTTGGAGCAGCGGAACCGGAGCTCGCCATCAGCAAAAGGGCATAATCACCCTGGGGAGCTTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CCA 72 bp GGCTGCCACAGTGTTGGGGTCCACAGTCACTTCCCGTaGGACGATGTAAGAGATGATCACGAGCAGGATCCC +
Preference number: 6 (lower is better)
Translates to: GCHSVGVHSHFP*DDVRDDHEQDP
Trigger: GGGATCCTGCTCGTGATCATCTCTTACATCGTCCCACGGGAAGTGACTGTGGACCCCAACACTGTGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CAA 72 bp TTTCCCAGCCAAGCTCCCCAGGGTGATTATGCCCTTTaGCTGATGGCGAGCTCCGGTTCCGCTGCTCCAAGT +
Preference number: 6 (lower is better)
Translates to: FPSQAPQGDYAL*LMASSGSAAPS
Trigger: ACTTGGAGCAGCGGAACCGGAGCTCGCCATCAGCAAAAGGGCATAATCACCCTGGGGAGCTTGGCTGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS GCA 72 bp GTCAGGTGCTATGGTTTTCCTTGGCCTGCCTCTGCCTaGATGGCAACTCACCGTCCAGAGCCTTTCCACTTG +
Preference number: 6 (lower is better)
Translates to: VRCYGFPWPASA*MATHRPEPFHL
Trigger: CAAGTGGAAAGGCTCTGGACGGTGAGTTGCCATGCAGGCAGAGGCAGGCCAAGGAAAACCATAGCACCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CCA 72 bp GGTGCTATGGTTTTCCTTGGCCTGCCTCTGCCTGCATaGCAACTCACCGTCCAGAGCCTTTCCACTTGGCTT +
Preference number: 6 (lower is better)
Translates to: GAMVFLGLPLPA*QLTVQSLSTWL
Trigger: AAGCCAAGTGGAAAGGCTCTGGACGGTGAGTTGCCATGCAGGCAGAGGCAGGCCAAGGAAAACCATAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS GCA 72 bp TTCATTCACTGTCAGGTGCTATGGTTTTCCTTGGCCTaGCTCTGCCTGCATGGCAACTCACCGTCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: FIHCQVLWFSLA*LCLHGNSPSRA
Trigger: GGCTCTGGACGGTGAGTTGCCATGCAGGCAGAGGCAGGCCAAGGAAAACCATAGCACCTGACAGTGAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS TCA 72 bp CCTGAGTGGAGAAGTCCTGGTGGAAAGGCATCTGGCTaGAGAGTACTGTTTTGCAGAGAGGAGGAGGGGGAT +
Preference number: 6 (lower is better)
Translates to: PEWRSPGGKASG*RVLFCREEEGD
Trigger: ATCCCCCTCCTCCTCTCTGCAAAACAGTACTCTTCAGCCAGATGCCTTTCCACCAGGACTTCTCCACTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS TCA 72 bp CCCAGGACTTTGGGAGGCCAGGTTTGGAGAATAGCTTaGGCCCAGGAGTTCATGATCAGCCTAGGCAACATA +
Preference number: 6 (lower is better)
Translates to: PRTLGGQVWRIA*AQEFMISLGNI
Trigger: TATGTTGCCTAGGCTGATCATGAACTCCTGGGCTCAAGCTATTCTCCAAACCTGGCCTCCCAAAGTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CAA 72 bp ATGACTTTCATTCACTGTCAGGTGCTATGGTTTTCCTaGGCCTGCCTCTGCCTGCATGGCAACTCACCGTCC +
Preference number: 6 (lower is better)
Translates to: MTFIHCQVLWFS*ACLCLHGNSPS
Trigger: GGACGGTGAGTTGCCATGCAGGCAGAGGCAGGCCAAGGAAAACCATAGCACCTGACAGTGAATGAAAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CAA 90 bp TACTCCAAGATGACTTTCATTCACTGTCAGGTGCTATGGTTTTCCTaGGCCTGCCTCTGCCTGCATGGCAACTCACCGTCCAGAGCCTTT +
Preference number: 6 (lower is better)
Translates to: YSKMTFIHCQVLWFS*ACLCLHGNSPSRAF
Trigger: AAAGGCTCTGGACGGTGAGTTGCCATGCAGGCAGAGGCAGGCCAAGGAAAACCATAGCACCTGACAGTGAATGAAAGTCATCTTGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CCA 72 bp AGAACTAAGTTTAGACCCTTCCATCTCGGTTGCTCTTaGGGTGGATGCACACTGTTTCTGACAGCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: RTKFRPFHLGCS*GGCTLFLTAES
Trigger: GCTCTCTGCTGTCAGAAACAGTGTGCATCCACCCCAAGAGCAACCGAGATGGAAGGGTCTAAACTTAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CCA 72 bp CTGCAGCAGTTACAGACTTTCCGTTCCGCTGTTATTTaGTTGTTCCCTGAGTGGAGAAGTCCTGGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: LQQLQTFRSAVI*LFPEWRSPGGK
Trigger: CTTTCCACCAGGACTTCTCCACTCAGGGAACAACCAAATAACAGCGGAACGGAAAGTCTGTAACTGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CCA 72 bp TACTCCAAGATGACTTTCATTCACTGTCAGGTGCTATaGTTTTCCTTGGCCTGCCTCTGCCTGCATGGCAAC +
Preference number: 6 (lower is better)
Translates to: YSKMTFIHCQVL*FSLACLCLHGN
Trigger: GTTGCCATGCAGGCAGAGGCAGGCCAAGGAAAACCATAGCACCTGACAGTGAATGAAAGTCATCTTGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CAA 72 bp CAGCAGTTACAGACTTTCCGTTCCGCTGTTATTTGGTaGTTCCCTGAGTGGAGAAGTCCTGGTGGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: QQLQTFRSAVIW*FPEWRSPGGKA
Trigger: TGCCTTTCCACCAGGACTTCTCCACTCAGGGAACAACCAAATAACAGCGGAACGGAAAGTCTGTAACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CAA 90 bp ACTTGTATCATCCTCCTCTTCAGATATCAAAGATATGGCAGCCTCTaGGGACCACTCATTTGGATTTTCCCAGCCAAGCTCCCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: TCIILLFRYQRYGSL*GPLIWIFPAKLPRV
Trigger: CACCCTGGGGAGCTTGGCTGGGAAAATCCAAATGAGTGGTCCCAAGAGGCTGCCATATCTTTGATATCTGAAGAGGAGGATGATACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS GCA 72 bp TGGAGAAGAACTAAGTTTAGACCCTTCCATCTCGGTTaGTCTTGGGGTGGATGCACACTGTTTCTGACAGCA +
Preference number: 6 (lower is better)
Translates to: WRRTKFRPFHLG*SWGGCTLFLTA
Trigger: TGCTGTCAGAAACAGTGTGCATCCACCCCAAGAGCAACCGAGATGGAAGGGTCTAAACTTAGTTCTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CCA 72 bp TATCAAAGATATGGCAGCCTCTTGGGACCACTCATTTaGATTTTCCCAGCCAAGCTCCCCAGGGTGATTATG +
Preference number: 6 (lower is better)
Translates to: YQRYGSLLGPLI*IFPAKLPRVIM
Trigger: CATAATCACCCTGGGGAGCTTGGCTGGGAAAATCCAAATGAGTGGTCCCAAGAGGCTGCCATATCTTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CCA 72 bp TCCTCCTCTTCAGATATCAAAGATATGGCAGCCTCTTaGGACCACTCATTTGGATTTTCCCAGCCAAGCTCC +
Preference number: 6 (lower is better)
Translates to: SSSSDIKDMAAS*DHSFGFSQPSS
Trigger: GGAGCTTGGCTGGGAAAATCCAAATGAGTGGTCCCAAGAGGCTGCCATATCTTTGATATCTGAAGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS GCA 72 bp TCCAGAGCCTTTCCACTTGGCTTGGGCTTCTCACAGTaGAGTAATCTTGGGGTAATCACATTTCTTGCATGT +
Preference number: 6 (lower is better)
Translates to: SRAFPLGLGFSQ*SNLGVITFLAC
Trigger: ACATGCAAGAAATGTGATTACCCCAAGATTACTGCACTGTGAGAAGCCCAAGCCAAGTGGAAAGGCTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CAA 72 bp ATATCAAAGATATGGCAGCCTCTTGGGACCACTCATTaGGATTTTCCCAGCCAAGCTCCCCAGGGTGATTAT +
Preference number: 6 (lower is better)
Translates to: ISKIWQPLGTTH*DFPSQAPQGDY
Trigger: ATAATCACCCTGGGGAGCTTGGCTGGGAAAATCCAAATGAGTGGTCCCAAGAGGCTGCCATATCTTTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CAA 72 bp ATCCTCCTCTTCAGATATCAAAGATATGGCAGCCTCTaGGGACCACTCATTTGGATTTTCCCAGCCAAGCTC +
Preference number: 6 (lower is better)
Translates to: ILLFRYQRYGSL*GPLIWIFPAKL
Trigger: GAGCTTGGCTGGGAAAATCCAAATGAGTGGTCCCAAGAGGCTGCCATATCTTTGATATCTGAAGAGGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CCA 72 bp CTTTTATCCCTATGGTGTCAGCTGAGGCAGTGGGACTaGAGGATATACTCCAAGATGACTTTCATTCACTGT +
Preference number: 6 (lower is better)
Translates to: LLSLWCQLRQWD*RIYSKMTFIHC
Trigger: ACAGTGAATGAAAGTCATCTTGGAGTATATCCTCCAGTCCCACTGCCTCAGCTGACACCATAGGGATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS TCA 72 bp CTCATGGTTTTGGAGGTAAGGAACTCAGGAATAGCTTaGCTGGGTGGTTTGTCTTTTATCCCTATGGTGTCA +
Preference number: 6 (lower is better)
Translates to: LMVLEVRNSGIA*LGGLSFIPMVS
Trigger: TGACACCATAGGGATAAAAGACAAACCACCCAGTCAAGCTATTCCTGAGTTCCTTACCTCCAAAACCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CCA 72 bp GTTTGTCTTTTATCCCTATGGTGTCAGCTGAGGCAGTaGGACTGGAGGATATACTCCAAGATGACTTTCATT +
Preference number: 6 (lower is better)
Translates to: VCLLSLWCQLRQ*DWRIYSKMTFI
Trigger: AATGAAAGTCATCTTGGAGTATATCCTCCAGTCCCACTGCCTCAGCTGACACCATAGGGATAAAAGACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS GCA 72 bp ATCACATTTCTTGCATGTGATCACACTTCAACCCTGTaGTTTATTGGTCAAAATAATCACAGGGCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: ITFLACDHTSTL*FIGQNNHRASQ
Trigger: CTGGGAGGCCCTGTGATTATTTTGACCAATAAAGCACAGGGTTGAAGTGTGATCACATGCAAGAAATGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CCA 72 bp AACTTGTATCATCCTCCTCTTCAGATATCAAAGATATaGCAGCCTCTTGGGACCACTCATTTGGATTTTCCC +
Preference number: 6 (lower is better)
Translates to: NLYHPPLQISKI*QPLGTTHLDFP
Trigger: GGGAAAATCCAAATGAGTGGTCCCAAGAGGCTGCCATATCTTTGATATCTGAAGAGGAGGATGATACAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297459.4
CDS CCA 72 bp GTGAAGAAATACACTCCAGCTTTTGATGTTCAGAATTaGACAAGGTCACATGACAGGAGAGCATGCAGAATG +
Preference number: 6 (lower is better)
Translates to: VKKYTPAFDVQN*TRSHDRRACRM
Trigger: CATTCTGCATGCTCTCCTGTCATGTGACCTTGTCCAATTCTGAACATCAAAAGCTGGAGTGTATTTCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CAA 72 bp TTCTTGCATGTGATCACACTTCAACCCTGTGCTTTATaGGTCAAAATAATCACAGGGCCTCCCAGATTCAAG +
Preference number: 6 (lower is better)
Translates to: FLHVITLQPCAL*VKIITGPPRFK
Trigger: CTTGAATCTGGGAGGCCCTGTGATTATTTTGACCAATAAAGCACAGGGTTGAAGTGTGATCACATGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CAA 90 bp AACATTATGTTTAACATCAATGTCTTGACCACTTCTGGAATCTTCTaGAATCTTCTCTGCTGGAATCCCAGGACTTTGGGAGGCCAGGTT +
Preference number: 6 (lower is better)
Translates to: NIMFNINVLTTSGIF*NLLCWNPRTLGGQV
Trigger: AACCTGGCCTCCCAAAGTCCTGGGATTCCAGCAGAGAAGATTCAAGAAGATTCCAGAAGTGGTCAAGACATTGATGTTAAACATAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS CCA 72 bp GTCGAACTTCTTAAGACACTTATGACGTTTTCAGTTTaGCTCTTCACTTTCAGGTGGCATCAATCCCAATCT +
Preference number: 6 (lower is better)
Translates to: VELLKTLMTFSV*LFTFRWHQSQS
Trigger: AGATTGGGATTGATGCCACCTGAAAGTGAAGAGCCAAACTGAAAACGTCATAAGTGTCTTAAGAAGTTCGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS TCA 72 bp AGATTCTGGTCTCTGGTCCACCTGATAACTATAAAATaGTGGCCTGTTGGTGTTATGGTAAACTATTCTTTG +
Preference number: 6 (lower is better)
Translates to: RFWSLVHLITIK*WPVGVMVNYSL
Trigger: CAAAGAATAGTTTACCATAACACCAACAGGCCATCATTTTATAGTTATCAGGTGGACCAGAGACCAGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1
CDS TCA 72 bp GAATTTAGTTTAAAGTCGAACTTCTTAAGACACTTATaGCGTTTTCAGTTTGGCTCTTCACTTTCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: EFSLKSNFLRHL*RFQFGSSLSGG
Trigger: GCCACCTGAAAGTGAAGAGCCAAACTGAAAACGTCATAAGTGTCTTAAGAAGTTCGACTTTAAACTAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518838.1