RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM71 (Homo sapiens)

Ensembl gene IDs: ENSG00000165071

Ensembl transcript IDs: ENST00000356838.7, ENST00000377901.8, ENST00000517538.1, ENST00000519016.5, ENST00000519187.5, ENST00000519304.1, ENST00000522334.5, ENST00000522594.1, ENST00000522780.5, ENST00000523829.5, ENST00000524079.5, ENST00000677595.1

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CTCATCTCATCGCTTCAGACAGACAGCTGTAACAGGTTCCGTCATCAGAAGGCGGTTCTCACCAGGTGCTaGAAGCTTCCTGTGCATTCT +
Preference number: 2 (lower is better)
Translates to: LISSLQTDSCNRFRHQKAVLTRC*KLPVHS
Trigger: AGAATGCACAGGAAGCTTGCAGCACCTGGTGAGAAC...CGCCTTCTGATGACGGAACCTGTTACAGCTGTCTGTCTGAAGCGATGAGATGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
3UTR-3UTR CCA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACATTCCAGATATTCAGATaGAGGACATTCATCGAAGGC +
Preference number: 2 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTFQIFR*RTFIEG
Trigger: GCCTTCGATGAATGTCCTCCATCTGAATATCTGGAA...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
3UTR-3UTR GCA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTCCTTTTCCTTTCAACTaGCGGTGTTTGCAAAGGGAA +
Preference number: 2 (lower is better)
Translates to: STALESRLKGTTAPFSCIPFPFN*RCLQRE
Trigger: TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGG...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
3UTR-3UTR CCA 90 bp TTCCATCACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAATTCCAGATATTCAGATaGAGGACATTCATCGAAGGC +
Preference number: 2 (lower is better)
Translates to: FHHIPRPFPFNCRCLQREFQIFR*RTFIEG
Trigger: GCCTTCGATGAATGTCCTCCATCTGAATATCTGGAA...TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
3UTR-3UTR CCA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACGCAGACCCAGAAATCTaGTTACAAGCTCCTCACAGA +
Preference number: 2 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDADPEI*LQAPHR
Trigger: TCTGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGC...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
3UTR-3UTR GCA 90 bp ATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTCAGCAAGAGATAGGTaGATGTGGCAGACCCAGAAA +
Preference number: 2 (lower is better)
Translates to: IYGYHLISSHSTEVNDKLSARDR*MWQTQK
Trigger: TTTCTGGGTCTGCCACATGCACCTATCTCTTGCTGA...AAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
3UTR-3UTR GCA 90 bp ATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTCCTTTTCCTTTCAACTaGCGGTGTTTGCAAAGGGAA +
Preference number: 2 (lower is better)
Translates to: IYGYHLISSHSTEVNDKLPFPFN*RCLQRE
Trigger: TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGG...AAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
3UTR-3UTR GCA 90 bp TCCATTTTCATATTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCTCAGCAAGAGATAGGTaGATGTGGCAGACCCAGAAA +
Preference number: 2 (lower is better)
Translates to: SIFILTIIYGYHLISSHSSARDR*MWQTQK
Trigger: TTTCTGGGTCTGCCACATGCACCTATCTCTTGCTGA...GGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAATATGAAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
3UTR-3UTR CCA 90 bp TCCATTTTCATATTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCGCAGACCCAGAAATCTaGTTACAAGCTCCTCACAGA +
Preference number: 2 (lower is better)
Translates to: SIFILTIIYGYHLISSHSADPEI*LQAPHR
Trigger: TCTGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGC...GGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAATATGAAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
3UTR CAA 90 bp ATGGCTTTTTCTCCATTACTCGCTTACTCCCTTCCAATAAAACACTaGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAG +
Preference number: 2 (lower is better)
Translates to: MAFSPLLAYSLPIKH*IPSRLQVGQFPDIQ
Trigger: CTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAATGGAGAAAAAGCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
3UTR-3UTR CCA 90 bp TCCATTTTCATATTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCTTCCAGATATTCAGATaGAGGACATTCATCGAAGGC +
Preference number: 2 (lower is better)
Translates to: SIFILTIIYGYHLISSHSFQIFR*RTFIEG
Trigger: GCCTTCGATGAATGTCCTCCATCTGAATATCTGGAA...GGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAATATGAAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
3UTR TCA 72 bp AGGTTCCGTCATCAGAAGGCGGACCCACACCTTCGTTaGGTTCTCACCAGGTGCTGCAAGCTTCCTGTGCAT +
Preference number: 3 (lower is better)
Translates to: RFRHQKADPHLR*VLTRCCKLPVH
Trigger: ATGCACAGGAAGCTTGCAGCACCTGGTGAGAACTCAACGAAGGTGTGGGTCCGCCTTCTGATGACGGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
3UTR TCA 72 bp GTGGTAGCAGGTGCTAAAGGCCTTGATGATGCCAGGTaGCTCTGCCTTCCCAGAGCAAGGGTTGCCTCATCT +
Preference number: 3 (lower is better)
Translates to: VVAGAKGLDDAR*LCLPRARVASS
Trigger: AGATGAGGCAACCCTTGCTCTGGGAAGGCAGAGTCACCTGGCATCATCAAGGCCTTTAGCACCTGCTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
3UTR-3UTR CAA 90 bp GAAAGGGAACATCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATCTTCCAATAAAACACTaGATTCCAAGTAGACTGCAA +
Preference number: 3 (lower is better)
Translates to: EREHLQPLSQGSRVQLHHLPIKH*IPSRLQ
Trigger: TTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAG...ATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTCCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
3UTR-3UTR CAA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCAAGTAGACTGCAAGTaGGACAATTTCCAGATATTC +
Preference number: 3 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLQVDCK*DNFQIF
Trigger: GAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
3UTR-3UTR CAA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCCAAGTAGACTGCAAGTaGGACAATTTCCAGATATTC +
Preference number: 3 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFQVDCK*DNFQIF
Trigger: GAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
3UTR-3UTR CAA 90 bp TCCATTTTCATATTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCCAAGTAGACTGCAAGTaGGACAATTTCCAGATATTC +
Preference number: 3 (lower is better)
Translates to: SIFILTIIYGYHLISSHSQVDCK*DNFQIF
Trigger: GAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG...GGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAATATGAAAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
3UTR-3UTR CAA 90 bp TCCATTTTCATATTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCCTTCCAATAAAACACTaGATTCCAAGTAGACTGCAA +
Preference number: 3 (lower is better)
Translates to: SIFILTIIYGYHLISSHSLPIKH*IPSRLQ
Trigger: TTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAG...GGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAATATGAAAATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR GCA 90 bp GCCTTGATGATGCCAGGTGACTCTGCCTTCCCAGAGCAAGGGTTGCCTCATCTCTCCCAGAGCAAGGGTTaGCTCATCTCATCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ALMMPGDSAFPEQGLPHLSQSKG*LISSLQ
Trigger: CTGAAGCGATGAGATGAGGCAACCCTTGCTCTGGGA...GAGATGAGGCAACCCTTGCTCTGGGAAGGCAGAGTCACCTGGCATCATCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR TCA 90 bp CATCGCTTCAGACAGACAGCTGTAACAGGTTCCGTCATCAGAAGGCGGACCCACGCTGTCAACTGGGACTaGAGAGACAAGCTATGGGAG +
Preference number: 4 (lower is better)
Translates to: HRFRQTAVTGSVIRRRTHAVNWD*RDKLWE
Trigger: CTCCCATAGCTTGTCTCTTCAGTCCCAGTTGACAGC...GTGGGTCCGCCTTCTGATGACGGAACCTGTTACAGCTGTCTGTCTGAAGCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR TCA 90 bp CATCGCTTCAGACAGACAGCTGTAACAGGTTCCGTCATCAGAAGGCGGACCCACTGCATTCATCTTCCCTaGCTCCCAGTCATCAGTCAG +
Preference number: 4 (lower is better)
Translates to: HRFRQTAVTGSVIRRRTHCIHLP*LPVISQ
Trigger: CTGACTGATGACTGGGAGTCAGGGAAGATGAATGCA...GTGGGTCCGCCTTCTGATGACGGAACCTGTTACAGCTGTCTGTCTGAAGCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR TCA 90 bp CATCGCTTCAGACAGACAGCTGTAACAGGTTCCGTCATCAGAAGGCGGACCCACGCAAGCAGGATTGCCTaGAAGAAGACCTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: HRFRQTAVTGSVIRRRTHASRIA*KKTSCN
Trigger: GTTGCAAGAGGTCTTCTTTCAGGCAATCCTGCTTGC...GTGGGTCCGCCTTCTGATGACGGAACCTGTTACAGCTGTCTGTCTGAAGCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR TCA 90 bp TCATCGCTTCAGACAGACAGCTGTAACAGGTTCCGTCATCAGAAGGCGGACCCATTTCCTCCAGGAGGCTaGGATATGATGTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SSLQTDSCNRFRHQKADPFPPGG*DMMWLE
Trigger: TTCCAGCCACATCATATCTCAGCCTCCTGGAGGAAA...TGGGTCCGCCTTCTGATGACGGAACCTGTTACAGCTGTCTGTCTGAAGCGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR GCA 90 bp CCGTCATCAGAAGGCGGACCCACACCTTCGTTGAGTTCTCACCAGGTGCTGCAAGCTGCAAGCTTCCTGTaGATTCTCCTGTTTAATCCT +
Preference number: 4 (lower is better)
Translates to: PSSEGGPTPSLSSHQVLQAASFL*ILLFNP
Trigger: AGGATTAAACAGGAGAATGCACAGGAAGCTTGCAGC...TTGCAGCACCTGGTGAGAACTCAACGAAGGTGTGGGTCCGCCTTCTGATGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR TCA 90 bp GCCTTGATGATGCCAGGTGACTCTGCCTTCCCAGAGCAAGGGTTGCCTCATCTCAACCTGGTTTCTGAATaGTCCGAACTATTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ALMMPGDSAFPEQGLPHLNLVSE*SELFSW
Trigger: CCAAGAGAATAGTTCGGATCATTCAGAAACCAGGTT...GAGATGAGGCAACCCTTGCTCTGGGAAGGCAGAGTCACCTGGCATCATCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR TCA 90 bp GCCTTGATGATGCCAGGTGACTCTGCCTTCCCAGAGCAAGGGTTGCCTCATCTCCAACAACCTGGTTTCTaGATGATCCGAACTATTCTC +
Preference number: 4 (lower is better)
Translates to: ALMMPGDSAFPEQGLPHLQQPGF*MIRTIL
Trigger: GAGAATAGTTCGGATCATTCAGAAACCAGGTTGTTG...GAGATGAGGCAACCCTTGCTCTGGGAAGGCAGAGTCACCTGGCATCATCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR GCA 90 bp TTCCATCACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGATGCCCACGCACATTaGTGTGCACAGGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: FHHIPRPFPFNCRCLQREDAHAH*CAQVLA
Trigger: TGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATC...TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTGATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp CAGAGCAAGGGTTGCCTCATCTCATCGCTTCAGACAGACAGCTGTAACAGGTTCGTTCTCACCAGGTGCTaGAAGCTTCCTGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: QSKGCLISSLQTDSCNRFVLTRC*KLPVHS
Trigger: AGAATGCACAGGAAGCTTGCAGCACCTGGTGAGAAC...GAACCTGTTACAGCTGTCTGTCTGAAGCGATGAGATGAGGCAACCCTTGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR CCA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACACTGTGTCCAACCTCCTaGTCCCCTTCAACCAGTTGT +
Preference number: 4 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTLCPTS*SPSTSC
Trigger: ACAACTGGTTGAAGGGGACCAGGAGGTTGGACACAG...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp CGCTTCAGACAGACAGCTGTAACAGGTTCCGTCATCAGAAGGCGGACCCACACCTCCGAACTATTCTCTTaGAAACGTTCAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RFRQTAVTGSVIRRRTHTSELFS*KRSEAV
Trigger: GACAGCTTCTGAACGTTTCCAAGAGAATAGTTCGGA...GGTGTGGGTCCGCCTTCTGATGACGGAACCTGTTACAGCTGTCTGTCTGAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR CCA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAAAACACGCACCAAGTGTaGGGGGTGGAAAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKNTHQV*GVEREH
Trigger: ATGTTCCCTTTCCACCCCCCACACTTGGTGCGTGTT...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATGCATTCATCTTCCCTaGCTCCCAGTCATCAGTCAG +
Preference number: 4 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKCIHLP*LPVISQ
Trigger: CTGACTGATGACTGGGAGTCAGGGAAGATGAATGCA...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAAGCAAGCAGGATTGCCTaGAAGAAGACCTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKASRIA*KKTSCN
Trigger: GTTGCAAGAGGTCTTCTTTCAGGCAATCCTGCTTGC...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp CGGACCCACACCTTCGTTGAGTTCTCACCAGGTGCTGCAAGCTTCCTGTGCATTTTGCACATGCAGAAATaGTTAAGCACACAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: RTHTFVEFSPGAASFLCILHMQK*LSTQQA
Trigger: TGCTTGCTGTGTGCTTAATCATTTCTGCATGTGCAA...AATGCACAGGAAGCTTGCAGCACCTGGTGAGAACTCAACGAAGGTGTGGGTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR TCA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAAAACATCTACAGCCCTTaGGTCAAGGCTCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKNIYSP*VKAQGY
Trigger: GTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTT...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp GAAAGGGAACATCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTCTTCTTCTCACAGATaGCCACGCACATTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EREHLQPLSQGSRVQLHHSSSHR*PRTLLC
Trigger: GCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGA...ATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTCCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACATCTTCTTCTCACAGATaGCCACGCACATTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTSSSHR*PRTLLC
Trigger: GCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGA...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACAAACGCTGGTCTGGGATaGGTTCAGAGTTATGTTGCC +
Preference number: 4 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTNAGLG*VQSYVA
Trigger: GGCAACATAACTCTGAACCCATCCCAGACCAGCGTT...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp GCTGTAACAGGTTCCGTCATCAGAAGGCGGACCCACACCTTCGTTGAGTTCTCACCTCTTGCAACAACCTaGTTTCTGAATGATCCGAAC +
Preference number: 4 (lower is better)
Translates to: AVTGSVIRRRTHTFVEFSPLATT*FLNDPN
Trigger: GTTCGGATCATTCAGAAACCAGGTTGTTGCAAGAGG...TGAGAACTCAACGAAGGTGTGGGTCCGCCTTCTGATGACGGAACCTGTTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR CCA 90 bp CTCATCTCATCGCTTCAGACAGACAGCTGTAACAGGTTCCGTCATCAGAAGGCGCACCCATCGTGTGGTTaGCATTGTTGTTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LISSLQTDSCNRFRHQKAHPSCG*HCCFLH
Trigger: GTGCAAGAAACAACAATGCCAACCACACGATGGGTG...CGCCTTCTGATGACGGAACCTGTTACAGCTGTCTGTCTGAAGCGATGAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR GCA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACACTGTGCACAGGTGCTTaGAGAGAAGTTTTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTLCTGA*REVLSS
Trigger: CGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAG...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTCCACGCACATTGCTGTaGACAGGTGCTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: STALESRLKGTTAPFSCIPRTLL*TGACRE
Trigger: TTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGG...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAACTTGGGAAGGCCGCTTaGTCAAACTTCACAGATTCT +
Preference number: 4 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKLGKAA*SNFTDS
Trigger: AGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAG...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACACTTGGGAAGGCCGCTTaGTCAAACTTCACAGATTCT +
Preference number: 4 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTLGKAA*SNFTDS
Trigger: AGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAG...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp GAAAGGGAACATCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATCTTGGGAAGGCCGCTTaGTCAAACTTCACAGATTCT +
Preference number: 4 (lower is better)
Translates to: EREHLQPLSQGSRVQLHHLGKAA*SNFTDS
Trigger: AGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAG...ATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTCCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp GAAAGGGAACATCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTCAGCAAGAGATAGGTaGATGTGGCAGACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: EREHLQPLSQGSRVQLHHSARDR*MWQTQK
Trigger: TTTCTGGGTCTGCCACATGCACCTATCTCTTGCTGA...ATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTCCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TTCCATCACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAATTGGGAAAATGCACGTaGGAGACAGCTCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FHHIPRPFPFNCRCLQRELGKCT*ETALQH
Trigger: ATGCTGGAGAGCTGTCTCCCACGTGCATTTTCCCAA...TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTCCAGGGAATCACAGGTaGAACTTGGGAAAATGCACG +
Preference number: 4 (lower is better)
Translates to: STALESRLKGTTAPFSCIPGNHR*NLGKCT
Trigger: CGTGCATTTTCCCAAGTTTCACCTGTGATTCCCTGG...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACAATTGCTGTGCACAGGTaGTTGCAGAGAAGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTIAVHR*LQRSFV
Trigger: GACAAAACTTCTCTGCAAGCACCTGTGCACAGCAAT...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACCCACGCACATTGCTGTaGACAGGTGCTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDPRTLL*TGACRE
Trigger: TTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGG...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACACCTTTTCCTTTCAACTaGCGGTGTTTGCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTPFPFN*RCLQRE
Trigger: TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGG...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAAATATTCGGTACATCTTaGGAAGGCCGCTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKIFGTS*EGRLLK
Trigger: TTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATAT...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp GAAAGGGAACATCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATATATTCGGTACATCTTaGGAAGGCCGCTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: EREHLQPLSQGSRVQLHHIFGTS*EGRLLK
Trigger: TTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATAT...ATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTCCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTTTGGGAAAATGCACGTaGGAGACAGCTCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: STALESRLKGTTAPFSCILGKCT*ETALQH
Trigger: ATGCTGGAGAGCTGTCTCCCACGTGCATTTTCCCAA...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAACTGTCAGGGGATCTATaGAGCCGCATTCAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKLSGDL*SRIQKN
Trigger: ATTCTTTTGAATGCGGCTCCATAGATCCCCTGACAG...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp GAAAGGGAACATCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATCCAGTTGTCTTCACTTaGAGAAGAGTTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: EREHLQPLSQGSRVQLHHPVVFT*RRVDVT
Trigger: GGTGACATCAACTCTTCTCCAAGTGAAGACAACTGG...ATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTCCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAACACGCACCAAGTGTaGGGGGTGGAAAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDNTHQV*GVEREH
Trigger: ATGTTCCCTTTCCACCCCCCACACTTGGTGCGTGTT...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAAAACCTGGTTTCTGAATaGTCCGAACTATTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKNLVSE*SELFSW
Trigger: CCAAGAGAATAGTTCGGATCATTCAGAAACCAGGTT...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp GAAAGGGAACATCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTACAGTTATCATCAATaGGCATGTGAAGACACTGGC +
Preference number: 4 (lower is better)
Translates to: EREHLQPLSQGSRVQLHHYSYHQ*ACEDTG
Trigger: GCCAGTGTCTTCACATGCTCATTGATGATAACTGTA...ATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTCCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACATACAGTTATCATCAATaGGCATGTGAAGACACTGGC +
Preference number: 4 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTYSYHQ*ACEDTG
Trigger: GCCAGTGTCTTCACATGCTCATTGATGATAACTGTA...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATACAGTTATCATCAATaGGCATGTGAAGACACTGGC +
Preference number: 4 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKYSYHQ*ACEDTG
Trigger: GCCAGTGTCTTCACATGCTCATTGATGATAACTGTA...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAACATCTACAGCCCTTaGGTCAAGGCTCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDNIYSP*VKAQGY
Trigger: GTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTT...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp AAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCTTAGATGCCCACGCACATTaGTGTGCACAGGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: KLLTEFPNENSSSRTTALDAHAH*CAQVLA
Trigger: TGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATC...TAAGGCAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACAGCTCAAGGGTACAACTaGACCATTTTCATGCATTTG +
Preference number: 4 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTAQGYN*TIFMHL
Trigger: CAAATGCATGAAAATGGTGCAGTTGTACCCTTGAGC...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TTCCATCACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAACCAGTTGTCTTCACTTaGAGAAGAGTTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: FHHIPRPFPFNCRCLQREPVVFT*RRVDVT
Trigger: GGTGACATCAACTCTTCTCCAAGTGAAGACAACTGG...TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TCTCCATTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGTATAGTAGCCATTGGTaGGGAGTCTGGGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: SPLLAYSLPIKHLIPSRLYSSHW*GVWDFG
Trigger: GCCGAAGTCCCAGACTCCTCACCAATGGCTACTATA...CAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAATGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATTATAGTAGCCATTGGTaGGGAGTCTGGGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNYSSHW*GVWDFG
Trigger: GCCGAAGTCCCAGACTCCTCACCAATGGCTACTATA...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGTATAGTAGCCATTGGTaGGGAGTCTGGGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLYSSHW*GVWDFG
Trigger: GCCGAAGTCCCAGACTCCTCACCAATGGCTACTATA...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp CTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCATTGCATTCATCTTCCCTaGCTCCCAGTCATCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LQVGQFPDIQMEDIHRRHCIHLP*LPVISQ
Trigger: CTGACTGATGACTGGGAGTCAGGGAAGATGAATGCA...ATGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356838.7
ENST00000677595.1
CDS-3UTR TCA 90 bp AAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCTTAGCTGTCAACTGGGACTaGAGAGACAAGCTATGGGAG +
Preference number: 4 (lower is better)
Translates to: KLLTEFPNENSSSRTTALAVNWD*RDKLWE
Trigger: CTCCCATAGCTTGTCTCTTCAGTCCCAGTTGACAGC...TAAGGCAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TTCCATCACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAACAACAACCTGGTTTCTaGATGATCCGAACTATTCTC +
Preference number: 4 (lower is better)
Translates to: FHHIPRPFPFNCRCLQREQQPGF*MIRTIL
Trigger: GAGAATAGTTCGGATCATTCAGAAACCAGGTTGTTG...TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATCCACGCACATTGCTGTaGACAGGTGCTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNPRTLL*TGACRE
Trigger: TTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGG...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp ATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTCCACGCACATTGCTGTaGACAGGTGCTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: IYGYHLISSHSTEVNDKLPRTLL*TGACRE
Trigger: TTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGG...AAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp ACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCATCTTCTTCTCACAGATaGCCACGCACATTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TASWTISRYSDGGHSSKASSSHR*PRTLLC
Trigger: GCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGA...TGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR GCA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTGGTTCAGAGTTATGTTaGCATCTTTGTCGCACAGGA +
Preference number: 4 (lower is better)
Translates to: STALESRLKGTTAPFSCIGSELC*HLCRTG
Trigger: TCCTGTGCGACAAAGATGGCAACATAACTCTGAACC...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp GAAAGGGAACATCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATATTACAGGCCATATTTaGTTTGTGAACACGCACCAA +
Preference number: 4 (lower is better)
Translates to: EREHLQPLSQGSRVQLHHITGHI*FVNTHQ
Trigger: TTGGTGCGTGTTCACAAAGCAAATATGGCCTGTAAT...ATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTCCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TTCCATCACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAATTCTCTTTCCAACCTaGAAGAACTTGCTACTGGTG +
Preference number: 4 (lower is better)
Translates to: FHHIPRPFPFNCRCLQREILFPT*KNLLLV
Trigger: CACCAGTAGCAAGTTCTTCCAGGTTGGAAAGAGAAT...TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTCTGTCAGGGGATCTATaGAGCCGCATTCAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: STALESRLKGTTAPFSCILSGDL*SRIQKN
Trigger: ATTCTTTTGAATGCGGCTCCATAGATCCCCTGACAG...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCCTGTGTCCAACCTCCTaGTCCCCTTCAACCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFLCPTS*SPSTSC
Trigger: ACAACTGGTTGAAGGGGACCAGGAGGTTGGACACAG...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TCTCCATTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGCTGTGTCCAACCTCCTaGTCCCCTTCAACCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SPLLAYSLPIKHLIPSRLLCPTS*SPSTSC
Trigger: ACAACTGGTTGAAGGGGACCAGGAGGTTGGACACAG...CAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAATGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp ATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTAACACGCACCAAGTGTaGGGGGTGGAAAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: IYGYHLISSHSTEVNDKLNTHQV*GVEREH
Trigger: ATGTTCCCTTTCCACCCCCCACACTTGGTGCGTGTT...AAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGAACACGCACCAAGTGTaGGGGGTGGAAAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLNTHQV*GVEREH
Trigger: ATGTTCCCTTTCCACCCCCCACACTTGGTGCGTGTT...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTTCATTTCCATTGCAATaGTCTGTGTCCAACCTCCTG +
Preference number: 4 (lower is better)
Translates to: STALESRLKGTTAPFSCISFPLQ*SVSNLL
Trigger: CAGGAGGTTGGACACAGACCATTGCAATGGAAATGA...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377901.8
CDS-3UTR CCA 90 bp TCATCTCATCGCTTCAGACAGACAGCTGTAACAGGTTCCGTCATCAGAAGGCGGGTTTTTGTCATTTTCTaGTACTTCGTAGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: SSHRFRQTAVTGSVIRRRVFVIF*YFVADK
Trigger: CTTGTCTGCTACGAAGTACCAGAAAATGACAAAAAC...CCGCCTTCTGATGACGGAACCTGTTACAGCTGTCTGTCTGAAGCGATGAGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR TCA 90 bp AAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCTTACCAGGGAATCACAGGTaGAACTTGGGAAAATGCACG +
Preference number: 4 (lower is better)
Translates to: KLLTEFPNENSSSRTTALPGNHR*NLGKCT
Trigger: CGTGCATTTTCCCAAGTTTCACCTGTGATTCCCTGG...TAAGGCAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCTGCATTCATCTTCCCTaGCTCCCAGTCATCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFCIHLP*LPVISQ
Trigger: CTGACTGATGACTGGGAGTCAGGGAAGATGAATGCA...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp ATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTTCCTCCAGGAGGCTaGGATATGATGTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: IYGYHLISSHSTEVNDKLFPPGG*DMMWLE
Trigger: TTCCAGCCACATCATATCTCAGCCTCCTGGAGGAAA...AAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATTTTCCTCCAGGAGGCTaGGATATGATGTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNFPPGG*DMMWLE
Trigger: TTCCAGCCACATCATATCTCAGCCTCCTGGAGGAAA...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTTTGCACATGCAGAAATaGTTAAGCACACAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: STALESRLKGTTAPFSCILHMQK*LSTQQA
Trigger: TGCTTGCTGTGTGCTTAATCATTTCTGCATGTGCAA...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TTCCATCACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAACCATTTTCATGCATTTaGAAGCGCATTGGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: FHHIPRPFPFNCRCLQREPFSCI*KRIGVL
Trigger: CAAAACACCAATGCGCTTTCAAATGCATGAAAATGG...TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTGATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp CAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCAACATCTACAGCCCTTaGGTCAAGGCTCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: QVDCKLDNFQIFRWRTFINIYSP*VKAQGY
Trigger: GTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTT...GATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGGCCATATTTGCTTTGTaGACACGCACCAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLAIFAL*TRTKCG
Trigger: CCCACACTTGGTGCGTGTTCACAAAGCAAATATGGC...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAGATGCCCACGCACATTaGTGTGCACAGGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRDAHAH*CAQVLA
Trigger: TGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATC...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTCCAAAGATACTTCCATaGAGCCAAGATTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: STALESRLKGTTAPFSCIPKILP*SQDLEV
Trigger: TACCTCCAAATCTTGGCTGCATGGAAGTATCTTTGG...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp TTCCATCACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAATTACAGGCCATATTTaGTTTGTGAACACGCACCAA +
Preference number: 4 (lower is better)
Translates to: FHHIPRPFPFNCRCLQREITGHI*FVNTHQ
Trigger: TTGGTGCGTGTTCACAAAGCAAATATGGCCTGTAAT...TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTGATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TCTCCATTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGTTGGGAAAATGCACGTaGGAGACAGCTCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SPLLAYSLPIKHLIPSRLLGKCT*ETALQH
Trigger: ATGCTGGAGAGCTGTCTCCCACGTGCATTTTCCCAA...CAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAATGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp CAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCAACGCTGGTCTGGGATaGGTTCAGAGTTATGTTGCC +
Preference number: 4 (lower is better)
Translates to: QVDCKLDNFQIFRWRTFINAGLG*VQSYVA
Trigger: GGCAACATAACTCTGAACCCATCCCAGACCAGCGTT...GATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp AAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCTTAAACGCTGGTCTGGGATaGGTTCAGAGTTATGTTGCC +
Preference number: 4 (lower is better)
Translates to: KLLTEFPNENSSSRTTALNAGLG*VQSYVA
Trigger: GGCAACATAACTCTGAACCCATCCCAGACCAGCGTT...TAAGGCAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TCACATAGTCAAACTAAAATGGCTTTTTCTCCATTACTCGCTTACTCCCTTCCACTGTGTCCAACCTCCTaGTCCCCTTCAACCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SHSQTKMAFSPLLAYSLPLCPTS*SPSTSC
Trigger: ACAACTGGTTGAAGGGGACCAGGAGGTTGGACACAG...TGGAAGGGAGTAAGCGAGTAATGGAGAAAAAGCCATTTTAGTTTGACTATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACCCTCTTGCAACAACCTaGTTTCTGAATGATCCGAAC +
Preference number: 4 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDPLATT*FLNDPN
Trigger: GTTCGGATCATTCAGAAACCAGGTTGTTGCAAGAGG...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp ACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCAGCAGACCCAGAAATCTaGTTACAAGCTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: TASWTISRYSDGGHSSKAADPEI*LQAPHR
Trigger: TCTGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGC...TGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACGGTGTTGACATCAGTTaGGATATTCGGTACATCTTG +
Preference number: 4 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDGVDIS*DIRYIL
Trigger: CAAGATGTACCGAATATCTCAACTGATGTCAACACC...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGATATAGTAGCCATTGGTaGGGAGTCTGGGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRYSSHW*GVWDFG
Trigger: GCCGAAGTCCCAGACTCCTCACCAATGGCTACTATA...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp AAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGGCTGTCAACTGGGACTaGAGAGACAAGCTATGGGAG +
Preference number: 4 (lower is better)
Translates to: KHLIPSRLQVGQFPDIQMAVNWD*RDKLWE
Trigger: CTCCCATAGCTTGTCTCTTCAGTCCCAGTTGACAGC...CATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356838.7
ENST00000677595.1
CDS-3UTR TCA 90 bp TTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTGCAAGCAGGATTGCCTaGAAGAAGACCTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: LLAYSLPIKHLIPSRLQVASRIA*KKTSCN
Trigger: GTTGCAAGAGGTCTTCTTTCAGGCAATCCTGCTTGC...AACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACTTGCACATGCAGAAATaGTTAAGCACACAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDLHMQK*LSTQQA
Trigger: TGCTTGCTGTGTGCTTAATCATTTCTGCATGTGCAA...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp ACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCAATGGTTGTCAAATTTTaGCAAACCGAGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: TASWTISRYSDGGHSSKAMVVKF*QTEHRQ
Trigger: CTGCCTGTGCTCGGTTTGTCAAAATTTGACAACCAT...TGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp TTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTAACATCTACAGCCCTTaGGTCAAGGCTCAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LLAYSLPIKHLIPSRLQVNIYSP*VKAQGY
Trigger: GTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTT...AACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp TTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTGCCATATTTGCTTTGTaGACACGCACCAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLAYSLPIKHLIPSRLQVAIFAL*TRTKCG
Trigger: CCCACACTTGGTGCGTGTTCACAAAGCAAATATGGC...AACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp TCACATAGTCAAACTAAAATGGCTTTTTCTCCATTACTCGCTTACTCCCTTCCAGCCATATTTGCTTTGTaGACACGCACCAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SHSQTKMAFSPLLAYSLPAIFAL*TRTKCG
Trigger: CCCACACTTGGTGCGTGTTCACAAAGCAAATATGGC...TGGAAGGGAGTAAGCGAGTAATGGAGAAAAAGCCATTTTAGTTTGACTATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR GCA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATCTGTGCACAGGTGCTTaGAGAGAAGTTTTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNLCTGA*REVLSS
Trigger: CGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAG...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp AAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCTTACTGTGCACAGGTGCTTaGAGAGAAGTTTTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: KLLTEFPNENSSSRTTALLCTGA*REVLSS
Trigger: CGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAG...TAAGGCAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACCCAAAGATACTTCCATaGAGCCAAGATTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDPKILP*SQDLEV
Trigger: TACCTCCAAATCTTGGCTGCATGGAAGTATCTTTGG...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATTCAGCAAGAGATAGGTaGATGTGGCAGACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNSARDR*MWQTQK
Trigger: TTTCTGGGTCTGCCACATGCACCTATCTCTTGCTGA...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp ACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCAATCACAGGTGAAACTTaGGAAAATGCACGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TASWTISRYSDGGHSSKAITGET*ENARGR
Trigger: TCTCCCACGTGCATTTTCCCAAGTTTCACCTGTGAT...TGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp CTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCATATCACAGGTGAAACTTaGGAAAATGCACGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LQVGQFPDIQMEDIHRRHITGET*ENARGR
Trigger: TCTCCCACGTGCATTTTCCCAAGTTTCACCTGTGAT...ATGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp CTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCATTACATAACGCTGGTCTaGGATGGGTTCAGAGTTATG +
Preference number: 4 (lower is better)
Translates to: LQVGQFPDIQMEDIHRRHYITLV*DGFRVM
Trigger: CATAACTCTGAACCCATCCCAGACCAGCGTTATGTA...ATGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp ACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCACCAGTTGTCTTCACTTaGAGAAGAGTTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: TASWTISRYSDGGHSSKAPVVFT*RRVDVT
Trigger: GGTGACATCAACTCTTCTCCAAGTGAAGACAACTGG...TGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGGCAGACCCAGAAATCTaGTTACAAGCTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLADPEI*LQAPHR
Trigger: TCTGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGC...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCGCAGACCCAGAAATCTaGTTACAAGCTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFADPEI*LQAPHR
Trigger: TCTGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGC...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp CTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCATACTTGCTACTGGTGTTaGCATCAGTTGAGATATTCG +
Preference number: 4 (lower is better)
Translates to: LQVGQFPDIQMEDIHRRHTCYWC*HQLRYS
Trigger: CGAATATCTCAACTGATGTCAACACCAGTAGCAAGT...ATGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp AGAAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGACCAGGGAATCACAGGTaGAACTTGGGAAAATGCACG +
Preference number: 4 (lower is better)
Translates to: RNLVTSSSQNFLMKIQARPGNHR*NLGKCT
Trigger: CGTGCATTTTCCCAAGTTTCACCTGTGATTCCCTGG...TCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TCCATTTTCATATTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCTTTCCTCCAGGAGGCTaGGATATGATGTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SIFILTIIYGYHLISSHSFPPGG*DMMWLE
Trigger: TTCCAGCCACATCATATCTCAGCCTCCTGGAGGAAA...GGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAATATGAAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCGCTGTCAACTGGGACTaGAGAGACAAGCTATGGGAG +
Preference number: 4 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFAVNWD*RDKLWE
Trigger: CTCCCATAGCTTGTCTCTTCAGTCCCAGTTGACAGC...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp AGAAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGCAAGCAGGATTGCCTaGAAGAAGACCTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: RNLVTSSSQNFLMKIQARASRIA*KKTSCN
Trigger: GTTGCAAGAGGTCTTCTTTCAGGCAATCCTGCTTGC...TCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp CAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCATGGTTGTCAAATTTTaGCAAACCGAGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: QVDCKLDNFQIFRWRTFIMVVKF*QTEHRQ
Trigger: CTGCCTGTGCTCGGTTTGTCAAAATTTGACAACCAT...GATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATATGGTTGTCAAATTTTaGCAAACCGAGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNMVVKF*QTEHRQ
Trigger: CTGCCTGTGCTCGGTTTGTCAAAATTTGACAACCAT...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp TCCATTTTCATATTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCGCCATATTTGCTTTGTaGACACGCACCAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SIFILTIIYGYHLISSHSAIFAL*TRTKCG
Trigger: CCCACACTTGGTGCGTGTTCACAAAGCAAATATGGC...GGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAATATGAAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGATCTTCTTCTCACAGATaGCCACGCACATTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRSSSHR*PRTLLC
Trigger: GCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGA...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp ATGCATTTGAAAGCGCATTGGTGTTTTGCCTATATTTTGCCCTCAAGGCATTTTCTTGGGAAGGCCGCTTaGTCAAACTTCACAGATTCT +
Preference number: 4 (lower is better)
Translates to: MHLKAHWCFAYILPSRHFLGKAA*SNFTDS
Trigger: AGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAG...AAAATGCCTTGAGGGCAAAATATAGGCAAAACACCAATGCGCTTTCAAATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp ATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTGGTTCAGAGTTATGTTaGCATCTTTGTCGCACAGGA +
Preference number: 4 (lower is better)
Translates to: IYGYHLISSHSTEVNDKLGSELC*HLCRTG
Trigger: TCCTGTGCGACAAAGATGGCAACATAACTCTGAACC...AAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCCCTTTTCCTTTCAACTaGCGGTGTTTGCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFPFPFN*RCLQRE
Trigger: TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGG...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp AGAAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGATTGGGAAAATGCACGTaGGAGACAGCTCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RNLVTSSSQNFLMKIQARLGKCT*ETALQH
Trigger: ATGCTGGAGAGCTGTCTCCCACGTGCATTTTCCCAA...TCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGATCACAGGTGAAACTTaGGAAAATGCACGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLITGET*ENARGR
Trigger: TCTCCCACGTGCATTTTCCCAAGTTTCACCTGTGAT...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TCTCCATTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGCTGTCAGGGGATCTATaGAGCCGCATTCAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: SPLLAYSLPIKHLIPSRLLSGDL*SRIQKN
Trigger: ATTCTTTTGAATGCGGCTCCATAGATCCCCTGACAG...CAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAATGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCAGTTGTCTTCACTTaGAGAAGAGTTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLPVVFT*RRVDVT
Trigger: GGTGACATCAACTCTTCTCCAAGTGAAGACAACTGG...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp ACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCATTCCAGATATTCAGATaGAGGACATTCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: TASWTISRYSDGGHSSKAFQIFR*RTFIEG
Trigger: GCCTTCGATGAATGTCCTCCATCTGAATATCTGGAA...TGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGGGTGTTGACATCAGTTaGGATATTCGGTACATCTTG +
Preference number: 4 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLGVDIS*DIRYIL
Trigger: CAAGATGTACCGAATATCTCAACTGATGTCAACACC...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCCCAGGGAATCACAGGTaGAACTTGGGAAAATGCACG +
Preference number: 4 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFPGNHR*NLGKCT
Trigger: CGTGCATTTTCCCAAGTTTCACCTGTGATTCCCTGG...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp CAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCCACTTGGAGAAGAGTTaGTGTCACCAAAGATACTTC +
Preference number: 4 (lower is better)
Translates to: QVDCKLDNFQIFRWRTFIHLEKS*CHQRYF
Trigger: GAAGTATCTTTGGTGACATCAACTCTTCTCCAAGTG...GATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATAACCTGGTTTCTGAATaGTCCGAACTATTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNNLVSE*SELFSW
Trigger: CCAAGAGAATAGTTCGGATCATTCAGAAACCAGGTT...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TCTCCATTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGAACCTGGTTTCTGAATaGTCCGAACTATTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SPLLAYSLPIKHLIPSRLNLVSE*SELFSW
Trigger: CCAAGAGAATAGTTCGGATCATTCAGAAACCAGGTT...CAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAATGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356838.7
ENST00000677595.1
CDS-3UTR TCA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGTTGCACATGCAGAAATaGTTAAGCACACAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLLHMQK*LSTQQA
Trigger: TGCTTGCTGTGTGCTTAATCATTTCTGCATGTGCAA...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp CAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCTTGCACATGCAGAAATaGTTAAGCACACAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: QVDCKLDNFQIFRWRTFILHMQK*LSTQQA
Trigger: TGCTTGCTGTGTGCTTAATCATTTCTGCATGTGCAA...GATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR GCA 90 bp ATGCATTTGAAAGCGCATTGGTGTTTTGCCTATATTTTGCCCTCAAGGCATTTTATTGCTGTGCACAGGTaGTTGCAGAGAAGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: MHLKAHWCFAYILPSRHFIAVHR*LQRSFV
Trigger: GACAAAACTTCTCTGCAAGCACCTGTGCACAGCAAT...AAAATGCCTTGAGGGCAAAATATAGGCAAAACACCAATGCGCTTTCAAATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp AAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCTTACCAAAGATACTTCCATaGAGCCAAGATTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: KLLTEFPNENSSSRTTALPKILP*SQDLEV
Trigger: TACCTCCAAATCTTGGCTGCATGGAAGTATCTTTGG...TAAGGCAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp ATGCATTTGAAAGCGCATTGGTGTTTTGCCTATATTTTGCCCTCAAGGCATTTTCCTTTTCCTTTCAACTaGCGGTGTTTGCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: MHLKAHWCFAYILPSRHFPFPFN*RCLQRE
Trigger: TTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGG...AAAATGCCTTGAGGGCAAAATATAGGCAAAACACCAATGCGCTTTCAAATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp AGAAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGATCAGCAAGAGATAGGTaGATGTGGCAGACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RNLVTSSSQNFLMKIQARSARDR*MWQTQK
Trigger: TTTCTGGGTCTGCCACATGCACCTATCTCTTGCTGA...TCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp AAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCTTAGCTCAAGGGTACAACTaGACCATTTTCATGCATTTG +
Preference number: 4 (lower is better)
Translates to: KLLTEFPNENSSSRTTALAQGYN*TIFMHL
Trigger: CAAATGCATGAAAATGGTGCAGTTGTACCCTTGAGC...TAAGGCAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp ATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTGCTCAAGGGTACAACTaGACCATTTTCATGCATTTG +
Preference number: 4 (lower is better)
Translates to: IYGYHLISSHSTEVNDKLAQGYN*TIFMHL
Trigger: CAAATGCATGAAAATGGTGCAGTTGTACCCTTGAGC...AAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTCTGTCAGGGGATCTATaGAGCCGCATTCAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LLAYSLPIKHLIPSRLQVLSGDL*SRIQKN
Trigger: ATTCTTTTGAATGCGGCTCCATAGATCCCCTGACAG...AACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp TCACATAGTCAAACTAAAATGGCTTTTTCTCCATTACTCGCTTACTCCCTTCCATACATAACGCTGGTCTaGGATGGGTTCAGAGTTATG +
Preference number: 4 (lower is better)
Translates to: SHSQTKMAFSPLLAYSLPYITLV*DGFRVM
Trigger: CATAACTCTGAACCCATCCCAGACCAGCGTTATGTA...TGGAAGGGAGTAAGCGAGTAATGGAGAAAAAGCCATTTTAGTTTGACTATGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp TCTCCATTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGTCCGAACTATTCTCTTaGAAACGTTCAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPLLAYSLPIKHLIPSRLSELFS*KRSEAV
Trigger: GACAGCTTCTGAACGTTTCCAAGAGAATAGTTCGGA...CAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAATGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356838.7
ENST00000677595.1
CDS-3UTR CCA 90 bp AAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCTTATCCGAACTATTCTCTTaGAAACGTTCAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KLLTEFPNENSSSRTTALSELFS*KRSEAV
Trigger: GACAGCTTCTGAACGTTTCCAAGAGAATAGTTCGGA...TAAGGCAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp ATGCATTTGAAAGCGCATTGGTGTTTTGCCTATATTTTGCCCTCAAGGCATTTTCCTCTTGCAACAACCTaGTTTCTGAATGATCCGAAC +
Preference number: 4 (lower is better)
Translates to: MHLKAHWCFAYILPSRHFPLATT*FLNDPN
Trigger: GTTCGGATCATTCAGAAACCAGGTTGTTGCAAGAGG...AAAATGCCTTGAGGGCAAAATATAGGCAAAACACCAATGCGCTTTCAAATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGTTCCAGATATTCAGATaGAGGACATTCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLFQIFR*RTFIEG
Trigger: GCCTTCGATGAATGTCCTCCATCTGAATATCTGGAA...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAGCAGACCCAGAAATCTaGTTACAAGCTCCTCACAGA +
Preference number: 4 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRADPEI*LQAPHR
Trigger: TCTGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGC...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TCACATAGTCAAACTAAAATGGCTTTTTCTCCATTACTCGCTTACTCCCTTCCACACTTGGAGAAGAGTTaGTGTCACCAAAGATACTTC +
Preference number: 4 (lower is better)
Translates to: SHSQTKMAFSPLLAYSLPHLEKS*CHQRYF
Trigger: GAAGTATCTTTGGTGACATCAACTCTTCTCCAAGTG...TGGAAGGGAGTAAGCGAGTAATGGAGAAAAAGCCATTTTAGTTTGACTATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp TCACATAGTCAAACTAAAATGGCTTTTTCTCCATTACTCGCTTACTCCCTTCCACAACAACCTGGTTTCTaGATGATCCGAACTATTCTC +
Preference number: 4 (lower is better)
Translates to: SHSQTKMAFSPLLAYSLPQQPGF*MIRTIL
Trigger: GAGAATAGTTCGGATCATTCAGAAACCAGGTTGTTG...TGGAAGGGAGTAAGCGAGTAATGGAGAAAAAGCCATTTTAGTTTGACTATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356838.7
ENST00000677595.1
CDS-3UTR TCA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCCCATTTTCATGCATTTaGAAGCGCATTGGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFPFSCI*KRIGVL
Trigger: CAAAACACCAATGCGCTTTCAAATGCATGAAAATGG...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp TCCATTTTCATATTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCGGTTCAGAGTTATGTTaGCATCTTTGTCGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SIFILTIIYGYHLISSHSGSELC*HLCRTG
Trigger: TCCTGTGCGACAAAGATGGCAACATAACTCTGAACC...GGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAATATGAAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp TTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTCCAAAGATACTTCCATaGAGCCAAGATTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LLAYSLPIKHLIPSRLQVPKILP*SQDLEV
Trigger: TACCTCCAAATCTTGGCTGCATGGAAGTATCTTTGG...AACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR GCA 90 bp CCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTTCAGCAAGAGATAGGTaGATGTGGCAGACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PIKHLIPSRLQVGQFPDISARDR*MWQTQK
Trigger: TTTCTGGGTCTGCCACATGCACCTATCTCTTGCTGA...AATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR GCA 90 bp TCACATAGTCAAACTAAAATGGCTTTTTCTCCATTACTCGCTTACTCCCTTCCAGCTCAAGGGTACAACTaGACCATTTTCATGCATTTG +
Preference number: 4 (lower is better)
Translates to: SHSQTKMAFSPLLAYSLPAQGYN*TIFMHL
Trigger: CAAATGCATGAAAATGGTGCAGTTGTACCCTTGAGC...TGGAAGGGAGTAAGCGAGTAATGGAGAAAAAGCCATTTTAGTTTGACTATGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR GCA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGATTACAGGCCATATTTaGTTTGTGAACACGCACCAA +
Preference number: 4 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLITGHI*FVNTHQ
Trigger: TTGGTGCGTGTTCACAAAGCAAATATGGCCTGTAAT...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR GCA 90 bp CAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCATTACAGGCCATATTTaGTTTGTGAACACGCACCAA +
Preference number: 4 (lower is better)
Translates to: QVDCKLDNFQIFRWRTFIITGHI*FVNTHQ
Trigger: TTGGTGCGTGTTCACAAAGCAAATATGGCCTGTAAT...GATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp TCCATTTTCATATTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCTACATAACGCTGGTCTaGGATGGGTTCAGAGTTATG +
Preference number: 4 (lower is better)
Translates to: SIFILTIIYGYHLISSHSYITLV*DGFRVM
Trigger: CATAACTCTGAACCCATCCCAGACCAGCGTTATGTA...GGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAATATGAAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGACCTCTTGCAACAACCTaGTTTCTGAATGATCCGAAC +
Preference number: 4 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRPLATT*FLNDPN
Trigger: GTTCGGATCATTCAGAAACCAGGTTGTTGCAAGAGG...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp ATGCATTTGAAAGCGCATTGGTGTTTTGCCTATATTTTGCCCTCAAGGCATTTTTTCCAGATATTCAGATaGAGGACATTCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: MHLKAHWCFAYILPSRHFFQIFR*RTFIEG
Trigger: GCCTTCGATGAATGTCCTCCATCTGAATATCTGGAA...AAAATGCCTTGAGGGCAAAATATAGGCAAAACACCAATGCGCTTTCAAATGCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAGGTGTTGACATCAGTTaGGATATTCGGTACATCTTG +
Preference number: 4 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRGVDIS*DIRYIL
Trigger: CAAGATGTACCGAATATCTCAACTGATGTCAACACC...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGACACTTGGAGAAGAGTTaGTGTCACCAAAGATACTTC +
Preference number: 4 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRHLEKS*CHQRYF
Trigger: GAAGTATCTTTGGTGACATCAACTCTTCTCCAAGTG...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATTCATCAATGAGCATGTaGAGACACTGGCTAATATTT +
Preference number: 4 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNSSMSM*RHWLIF
Trigger: AAATATTAGCCAGTGTCTTCACATGCTCATTGATGA...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGTCATCAATGAGCATGTaGAGACACTGGCTAATATTT +
Preference number: 4 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLSSMSM*RHWLIF
Trigger: AAATATTAGCCAGTGTCTTCACATGCTCATTGATGA...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATAAGGCTGAGAAACAATaGTTTCACATAAGCTACAGT +
Preference number: 4 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNKAEKQ*FHISYS
Trigger: ACTGTAGCTTATGTGAAATCATTGTTTCTCAGCCTT...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR GCA 90 bp CCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTGGTTCAGAGTTATGTTaGCATCTTTGTCGCACAGGA +
Preference number: 4 (lower is better)
Translates to: PIKHLIPSRLQVGQFPDIGSELC*HLCRTG
Trigger: TCCTGTGCGACAAAGATGGCAACATAACTCTGAACC...AATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp CCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTATATTCGGTACATCTTaGGAAGGCCGCTTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PIKHLIPSRLQVGQFPDIIFGTS*EGRLLK
Trigger: TTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATAT...AATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp AGAAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAATTCTCTTTCCAACCTaGAAGAACTTGCTACTGGTG +
Preference number: 4 (lower is better)
Translates to: RNLVTSSSQNFLMKIQARILFPT*KNLLLV
Trigger: CACCAGTAGCAAGTTCTTCCAGGTTGGAAAGAGAAT...TCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCATCACAGGTGAAACTTaGGAAAATGCACGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFITGET*ENARGR
Trigger: TCTCCCACGTGCATTTTCCCAAGTTTCACCTGTGAT...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCTACATAACGCTGGTCTaGGATGGGTTCAGAGTTATG +
Preference number: 4 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFYITLV*DGFRVM
Trigger: CATAACTCTGAACCCATCCCAGACCAGCGTTATGTA...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp AAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGTCCGAACTATTCTCTTaGAAACGTTCAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KHLIPSRLQVGQFPDIQMSELFS*KRSEAV
Trigger: GACAGCTTCTGAACGTTTCCAAGAGAATAGTTCGGA...CATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356838.7
ENST00000677595.1
CDS-3UTR CCA 90 bp CTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCATCATTTGAAAGCGCATTaGTGTTTTGCCTATATTTTG +
Preference number: 4 (lower is better)
Translates to: LQVGQFPDIQMEDIHRRHHLKAH*CFAYIL
Trigger: CAAAATATAGGCAAAACACCAATGCGCTTTCAAATG...ATGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp TTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTCCTCTTGCAACAACCTaGTTTCATTTCCATTGCAAT +
Preference number: 4 (lower is better)
Translates to: LLAYSLPIKHLIPSRLQVPLATT*FHFHCN
Trigger: ATTGCAATGGAAATGAAACCAGGTTGTTGCAAGAGG...AACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377901.8
CDS-3UTR TCA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCGGTGTTGACATCAGTTaGGATATTCGGTACATCTTG +
Preference number: 4 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFGVDIS*DIRYIL
Trigger: CAAGATGTACCGAATATCTCAACTGATGTCAACACC...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCCAACAACCTGGTTTCTaGATGATCCGAACTATTCTC +
Preference number: 4 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFQQPGF*MIRTIL
Trigger: GAGAATAGTTCGGATCATTCAGAAACCAGGTTGTTG...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCTACAGTTATCATCAATaGGCATGTGAAGACACTGGC +
Preference number: 4 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFYSYHQ*ACEDTG
Trigger: GCCAGTGTCTTCACATGCTCATTGATGATAACTGTA...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAAATAGCTGGCAAGGCTaGGAAACAATGATTTCACAT +
Preference number: 4 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRNSWQG*ETMISH
Trigger: ATGTGAAATCATTGTTTCTCAGCCTTGCCAGCTATT...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp ATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTCATTTGAAAGCGCATTaGTGTTTTGCCTATATTTTG +
Preference number: 4 (lower is better)
Translates to: IYGYHLISSHSTEVNDKLHLKAH*CFAYIL
Trigger: CAAAATATAGGCAAAACACCAATGCGCTTTCAAATG...AAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR TCA 90 bp AAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGTCATCAATGAGCATGTaGAGACACTGGCTAATATTT +
Preference number: 4 (lower is better)
Translates to: KHLIPSRLQVGQFPDIQMSSMSM*RHWLIF
Trigger: AAATATTAGCCAGTGTCTTCACATGCTCATTGATGA...CATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp AAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGAAGGCTGAGAAACAATaGTTTCACATAAGCTACAGT +
Preference number: 4 (lower is better)
Translates to: KHLIPSRLQVGQFPDIQMKAEKQ*FHISYS
Trigger: ACTGTAGCTTATGTGAAATCATTGTTTCTCAGCCTT...CATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp CCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTAATAGCTGGCAAGGCTaGGAAACAATGATTTCACAT +
Preference number: 4 (lower is better)
Translates to: PIKHLIPSRLQVGQFPDINSWQG*ETMISH
Trigger: ATGTGAAATCATTGTTTCTCAGCCTTGCCAGCTATT...AATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp CCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCCATTTTCATGCATTTaGAAGCGCATTGGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: PIKHLIPSRLQVGQFPDIPFSCI*KRIGVL
Trigger: CAAAACACCAATGCGCTTTCAAATGCATGAAAATGG...AATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR TCA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCAAGGCTGAGAAACAATaGTTTCACATAAGCTACAGT +
Preference number: 4 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFKAEKQ*FHISYS
Trigger: ACTGTAGCTTATGTGAAATCATTGTTTCTCAGCCTT...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CCA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGACATTTGAAAGCGCATTaGTGTTTTGCCTATATTTTG +
Preference number: 4 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRHLKAH*CFAYIL
Trigger: CAAAATATAGGCAAAACACCAATGCGCTTTCAAATG...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CCA 90 bp CCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCATTTGAAAGCGCATTaGTGTTTTGCCTATATTTTG +
Preference number: 4 (lower is better)
Translates to: PIKHLIPSRLQVGQFPDIHLKAH*CFAYIL
Trigger: CAAAATATAGGCAAAACACCAATGCGCTTTCAAATG...AATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp CCGTCATCAGAAGGCGGACCCACACCTTCGTTGAGTTCTCACCAGGTGCTGCAAGGACCCACACCTTCGTaGAGTTCTCACCAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PSSEGGPTPSLSSHQVLQGPTPS*SSHQVL
Trigger: CAGCACCTGGTGAGAACTCAACGAAGGTGTGGGTCC...TTGCAGCACCTGGTGAGAACTCAACGAAGGTGTGGGTCCGCCTTCTGATGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR CAA 90 bp CATCGCTTCAGACAGACAGCTGTAACAGGTTCCGTCATCAGAAGGCGGACCCACTTCCCAGAGCAAGGGTaGCCTCATCTCATCGCTTCA +
Preference number: 5 (lower is better)
Translates to: HRFRQTAVTGSVIRRRTHFPEQG*PHLIAS
Trigger: TGAAGCGATGAGATGAGGCAACCCTTGCTCTGGGAA...GTGGGTCCGCCTTCTGATGACGGAACCTGTTACAGCTGTCTGTCTGAAGCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS TCA 90 bp AGCTGTAACAGGTTCCGTCATCAGAAGGCGGACCCACACCTTCGTTaGGTTCTCACCAGGTGCTGCAAGCTTCCTGTGCATTCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: SCNRFRHQKADPHLR*VLTRCCKLPVHSPV
Trigger: AACAGGAGAATGCACAGGAAGCTTGCAGCACCTGGTGAGAACTCAACGAAGGTGTGGGTCCGCCTTCTGATGACGGAACCTGTTACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522780.5
ENST00000524079.5
CDS CCA 90 bp TGGGACTTCGGCGACAGGTATAGTGGGAGCCTGTCAGGGGATCTATaGAGCCGCATTCAAAAGAATGGTAACCATCCAGGGAATCACAGG +
Preference number: 5 (lower is better)
Translates to: WDFGDRYSGSLSGDL*SRIQKNGNHPGNHR
Trigger: CCTGTGATTCCCTGGATGGTTACCATTCTTTTGAATGCGGCTCCATAGATCCCCTGACAGGCTCCCACTATACCTGTCGCCGAAGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000519187.5
ENST00000519304.1
ENST00000522334.5
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACAAGATGCCCACGCACATaGCTGTGCACAGGTGCTTGC +
Preference number: 5 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTRCPRT*LCTGAC
Trigger: GCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCT...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp CACACCTTCGTTGAGTTCTCACCAGGTGCTGCAAGCTTCCTGTGCATTCTCCTGCAGGTGCTAAAGGCCTaGATGATGCCAGGTGACTCT +
Preference number: 5 (lower is better)
Translates to: HTFVEFSPGAASFLCILLQVLKA*MMPGDS
Trigger: AGAGTCACCTGGCATCATCAAGGCCTTTAGCACCTG...CAGGAGAATGCACAGGAAGCTTGCAGCACCTGGTGAGAACTCAACGAAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS TCA 90 bp TGTCGCACAGGAAGCTGTCTTCAGTCCAAATATAGTAGCCATTGGTaGGGAGTCTGGGACTTCGGCGACAGGTATAGTGGGAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: CRTGSCLQSKYSSHW*GVWDFGDRYSGSLS
Trigger: TGACAGGCTCCCACTATACCTGTCGCCGAAGTCCCAGACTCCTCACCAATGGCTACTATATTTGGACTGAAGACAGCTTCCTGTGCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000519187.5
ENST00000519304.1
ENST00000522334.5
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp CATCGCTTCAGACAGACAGCTGTAACAGGTTCCGTCATCAGAAGGCGGACCCACACACAGCAAGCAGGATaGCCTGAAAGAAGACCTCTT +
Preference number: 5 (lower is better)
Translates to: HRFRQTAVTGSVIRRRTHTQQAG*PERRPL
Trigger: AAGAGGTCTTCTTTCAGGCAATCCTGCTTGCTGTGT...GTGGGTCCGCCTTCTGATGACGGAACCTGTTACAGCTGTCTGTCTGAAGCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS GCA 90 bp TTATCAGCCTGGACATTCCTTCTTCTCACAGATGCCCACGCACATTaGTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LSAWTFLLLTDAHAH*CAQVLAEKFCLRQP
Trigger: AGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAATGTCCAGGCTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519187.5
CDS GCA 90 bp CCTTCTTCTCACAGATGCCCACGCACATTGCTGTGCACAGGTGCTTaGAGAGAAGTTTTGTCTTCGGCAGCCTCTTGTTCTCTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: PSSHRCPRTLLCTGA*REVLSSAASCSLVC
Trigger: ACAGACAAGAGAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519304.1
ENST00000522334.5
CDS GCA 90 bp GCTTCCTTCTTCTCACAGATGCCCACGCACATTGCTGTGCACAGGTaGTTGCAGAGAAGTTTTGTCTTCGGCAGCCTCTTGTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: ASFFSQMPTHIAVHR*LQRSFVFGSLLFSC
Trigger: ACAAGAGAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS GCA 90 bp ACCCACACCTTCGTTGAGTTCTCACCAGGTGCTGCAAGCTTCCTGTaGATTCTCCTGTTTAATCCTCACCCATCGTGTGGTTGGCATTGT +
Preference number: 5 (lower is better)
Translates to: THTFVEFSPGAASFL*ILLFNPHPSCGWHC
Trigger: ACAATGCCAACCACACGATGGGTGAGGATTAAACAGGAGAATGCACAGGAAGCTTGCAGCACCTGGTGAGAACTCAACGAAGGTGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522780.5
ENST00000524079.5
CDS-3UTR CAA 90 bp CCCACACCTTCGTTGAGTTCTCACCAGGTGCTGCAAGCTTCCTGTGCATTCTCCGTGTGGTTGGCATTGTaGTTTCTTGCACATGCAGAA +
Preference number: 5 (lower is better)
Translates to: PTPSLSSHQVLQASCAFSVWLAL*FLAHAE
Trigger: TTCTGCATGTGCAAGAAACAACAATGCCAACCACAC...GGAGAATGCACAGGAAGCTTGCAGCACCTGGTGAGAACTCAACGAAGGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR CAA 90 bp TCATCGCTTCAGACAGACAGCTGTAACAGGTTCCGTCATCAGAAGGCGGACCCATCACCCATCGTGTGGTaGGCATTGTTGTTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: SSLQTDSCNRFRHQKADPSPIVW*ALLFLA
Trigger: TGCAAGAAACAACAATGCCAACCACACGATGGGTGA...TGGGTCCGCCTTCTGATGACGGAACCTGTTACAGCTGTCTGTCTGAAGCGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS GCA 90 bp TCTTCTTCTCACAGATGCCCACGCACATTGCTGTGCACAGGTGCTTaGAGAGAAGTTTTGTCTTCGGCAGCCTCTTGTTCTCTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: SSSHRCPRTLLCTGA*REVLSSAASCSLVC
Trigger: ACAGACAAGAGAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522594.1
ENST00000677595.1
CDS GCA 90 bp CTTCACAGATTCTCTTCTTCTCACAGATGCCCACGCACATTGCTGTaGACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCAGCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: LHRFSSSHRCPRTLL*TGACREVLSSAASC
Trigger: ACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGAGAATCTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522594.1
ENST00000523829.5
ENST00000677595.1
CDS GCA 90 bp AATACGAAGCTTCCTTCTTCTCACAGATGCCCACGCACATTGCTGTaGACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCAGCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: NTKLPSSHRCPRTLL*TGACREVLSSAASC
Trigger: ACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAAGCTTCGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS GCA 90 bp ACTGAAATACGAAGCTTCCTTCTTCTCACAGATGCCCACGCACATTaGTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: TEIRSFLLLTDAHAH*CAQVLAEKFCLRQP
Trigger: AGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAAGCTTCGTATTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS GCA 90 bp AGAACCTTCTTCTCACAGATGCCCACGCACATTGCTGTGCACAGGTaGTTGCAGAGAAGTTTTGTCTTCGGCAGCCTCTTGTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: RTFFSQMPTHIAVHR*LQRSFVFGSLLFSC
Trigger: ACAAGAGAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522334.5
CDS-3UTR CAA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACAGCTTGCAGAGAAGTTTaGTCTTCGGCAGCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTACREV*SSAASC
Trigger: ACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGC...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAGATGCCCACGCACATaGCTGTGCACAGGTGCTTGC +
Preference number: 5 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDRCPRT*LCTGAC
Trigger: GCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCT...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAAGTCCCCTTCAACCAGTaGTCTTCACTTGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKVPFNQ*SSLGEE
Trigger: CTCTTCTCCAAGTGAAGACAACTGGTTGAAGGGGAC...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS GCA 90 bp ATTCTCTTCTTCTCACAGATGCCCACGCACATTGCTGTGCACAGGTaGTTGCAGAGAAGTTTTGTCTTCGGCAGCCTCTTGTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: ILFFSQMPTHIAVHR*LQRSFVFGSLLFSC
Trigger: ACAAGAGAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522594.1
ENST00000523829.5
ENST00000677595.1
CDS GCA 90 bp TCAAACTTCACAGATTCTCTTCTTCTCACAGATGCCCACGCACATTaGTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SNFTDSLLLTDAHAH*CAQVLAEKFCLRQP
Trigger: AGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGAGAATCTGTGAAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522594.1
ENST00000523829.5
ENST00000677595.1
CDS CCA 90 bp GTCTGTGTCCAACCTCCTGGTCCCCTTCAACCAGTTGTCTTCACTTaGAGAAGAGTTGATGTCACCAAAGATACTTCCATGCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: VCVQPPGPLQPVVFT*RRVDVTKDTSMQPR
Trigger: TCTTGGCTGCATGGAAGTATCTTTGGTGACATCAACTCTTCTCCAAGTGAAGACAACTGGTTGAAGGGGACCAGGAGGTTGGACACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000522334.5
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGAGATGCCCACGCACATaGCTGTGCACAGGTGCTTGC +
Preference number: 5 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLRCPRT*LCTGAC
Trigger: GCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCT...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp CAGAGCAAGGGTTGCCTCATCTCATCGCTTCAGACAGACAGCTGTAACAGGTTCATCCGAACTATTCTCTaGGAAACGTTCAGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: QSKGCLISSLQTDSCNRFIRTIL*ETFRSC
Trigger: ACAGCTTCTGAACGTTTCCAAGAGAATAGTTCGGAT...GAACCTGTTACAGCTGTCTGTCTGAAGCGATGAGATGAGGCAACCCTTGCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522780.5
CDS-3UTR CAA 90 bp GAAAGGGAACATCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATCTGGTTTCATTTCCATaGCAATGGTCTGTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: EREHLQPLSQGSRVQLHHLVSFP*QWSVSN
Trigger: GTTGGACACAGACCATTGCAATGGAAATGAAACCAG...ATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTCCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377901.8
CDS-3UTR CAA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACGCTTGCAGAGAAGTTTaGTCTTCGGCAGCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDACREV*SSAASC
Trigger: ACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGC...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAAAAGCGCATTGGTGTTTaGCCTATATTTTGCCCTCAA +
Preference number: 5 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKKRIGV*PIFCPQ
Trigger: TTGAGGGCAAAATATAGGCAAAACACCAATGCGCTT...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS TCA 90 bp ATCCAGGGAATCACAGGTGAAATTGCTACTGGTGTTGACATCAGTTaGGATATTCGGTACATCTTGGGAAGGCCGCTTGCTCAAACTTCA +
Preference number: 5 (lower is better)
Translates to: IQGITGEIATGVDIS*DIRYILGRPLAQTS
Trigger: TGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAATTTCACCTGTGATTCCCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519016.5
CDS CCA 90 bp AACTTGCTACTGGTGTTGACATCAGTTGAGATATTCGGTACATCTTaGGAAGGCCGCTTGCTCAAACTTCACAGATTCTGTGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: NLLLVLTSVEIFGTS*EGRLLKLHRFCVPS
Trigger: GGAAGGAACACAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS-3UTR CAA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACACACAGCAAGCAGGATaGCCTGAAAGAAGACCTCTT +
Preference number: 5 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDTQQAG*PERRPL
Trigger: AAGAGGTCTTCTTTCAGGCAATCCTGCTTGCTGTGT...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS CCA 90 bp AACTTGCTACTGGTGTTGACATCAGTTGAGATATTCGGTACATCTTaGGAAGGCCGCTTGCTCAAACTTCACAGATTCTCTTCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: NLLLVLTSVEIFGTS*EGRLLKLHRFSSSH
Trigger: GTGAGAAGAAGAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS CCA 90 bp GATTTGGAGGTACTAACTAAGTTCTCCTTATACATAACGCTGGTCTaGGATGGGTTCAGAGTTATGTTGCCATCTTTGTCGCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: DLEVLTKFSLYITLV*DGFRVMLPSLSHRK
Trigger: CTTCCTGTGCGACAAAGATGGCAACATAACTCTGAACCCATCCCAGACCAGCGTTATGTATAAGGAGAACTTAGTTAGTACCTCCAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356838.7
CDS CCA 90 bp CTATTGCTACTGGTGTTGACATCAGTTGAGATATTCGGTACATCTTaGGAAGGCCGCTTGCTCAAACTTCACAGATTCTCTTCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: LLLLVLTSVEIFGTS*EGRLLKLHRFSSSH
Trigger: GTGAGAAGAAGAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517538.1
CDS CCA 90 bp TACTTGCTACTGGTGTTGACATCAGTTGAGATATTCGGTACATCTTaGGAAGGCCGCTTGCTCAAACTTCACAGATTCTCTTCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: YLLLVLTSVEIFGTS*EGRLLKLHRFSSSH
Trigger: GTGAGAAGAAGAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522594.1
CDS-3UTR CAA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGGCTTGCAGAGAAGTTTaGTCTTCGGCAGCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLACREV*SSAASC
Trigger: ACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGC...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp CAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGCTGTGCACAGGTGCTaGCAGAGAAGTTTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: QVDCKLDNFQIFRWRTFIAVHRC*QRSFVF
Trigger: GAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGC...GATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGTCTTGGGAAGGCCGCTaGCTCAAACTTCACAGATTC +
Preference number: 5 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLSWEGR*LKLHRF
Trigger: GAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGA...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp AAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCTTATCTTGGGAAGGCCGCTaGCTCAAACTTCACAGATTC +
Preference number: 5 (lower is better)
Translates to: KLLTEFPNENSSSRTTALSWEGR*LKLHRF
Trigger: GAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGA...TAAGGCAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGATATTCGGTACATCTaGGGAAGGCCGCTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNDIRYI*GRPLAQ
Trigger: TTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATC...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGGATATTCGGTACATCTaGGGAAGGCCGCTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLDIRYI*GRPLAQ
Trigger: TTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATC...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp ATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTGATATTCGGTACATCTaGGGAAGGCCGCTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: IYGYHLISSHSTEVNDKLDIRYI*GRPLAQ
Trigger: TTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATC...AAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp CAAGTAGACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGGGTTCAGAGTTATGTaGCCATCTTTGTCGCACAGG +
Preference number: 5 (lower is better)
Translates to: QVDCKLDNFQIFRWRTFIGFRVM*PSLSHR
Trigger: CCTGTGCGACAAAGATGGCAACATAACTCTGAACCC...GATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGGGGTTCAGAGTTATGTaGCCATCTTTGTCGCACAGG +
Preference number: 5 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLGFRVM*PSLSHR
Trigger: CCTGTGCGACAAAGATGGCAACATAACTCTGAACCC...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGGGGTTCAGAGTTATGTaGCCATCTTTGTCGCACAGG +
Preference number: 5 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLGFRVM*PSLSHR
Trigger: CCTGTGCGACAAAGATGGCAACATAACTCTGAACCC...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGGTCCCCTTCAACCAGTaGTCTTCACTTGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLVPFNQ*SSLGEE
Trigger: CTCTTCTCCAAGTGAAGACAACTGGTTGAAGGGGAC...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGGTCCCCTTCAACCAGTaGTCTTCACTTGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLVPFNQ*SSLGEE
Trigger: CTCTTCTCCAAGTGAAGACAACTGGTTGAAGGGGAC...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp ATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTGTCCCCTTCAACCAGTaGTCTTCACTTGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: IYGYHLISSHSTEVNDKLVPFNQ*SSLGEE
Trigger: CTCTTCTCCAAGTGAAGACAACTGGTTGAAGGGGAC...AAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTAAGCGCATTGGTGTTTaGCCTATATTTTGCCCTCAA +
Preference number: 5 (lower is better)
Translates to: STALESRLKGTTAPFSCIKRIGV*PIFCPQ
Trigger: TTGAGGGCAAAATATAGGCAAAACACCAATGCGCTT...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp CACATTCCCCGTCCTTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAAGCATTTGAAAGCGCATaGGTGTTTTGCCTATATTTT +
Preference number: 5 (lower is better)
Translates to: HIPRPFPFNCRCLQREGKAFESA*VFCLYF
Trigger: AAAATATAGGCAAAACACCAATGCGCTTTCAAATGC...TTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAAGGACGGGGAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp GCAAGAGATAGGTGCATGTGGCAGACCCAGAAATCTGGTTACAAGCTCCTCACAACCATTTTCATGCATTaGAAAGCGCATTGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: ARDRCMWQTQKSGYKLLTTIFMH*KAHWCF
Trigger: AAAACACCAATGCGCTTTCAAATGCATGAAAATGGT...TGTGAGGAGCTTGTAACCAGATTTCTGGGTCTGCCACATGCACCTATCTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGGAACATCTACAGCCCTaGAGTCAAGGCTCAAGGGTA +
Preference number: 5 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLEHLQP*SQGSRV
Trigger: TACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTC...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCGAACATCTACAGCCCTaGAGTCAAGGCTCAAGGGTA +
Preference number: 5 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFEHLQP*SQGSRV
Trigger: TACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTC...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp AAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCTTAGAACATCTACAGCCCTaGAGTCAAGGCTCAAGGGTA +
Preference number: 5 (lower is better)
Translates to: KLLTEFPNENSSSRTTALEHLQP*SQGSRV
Trigger: TACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTC...TAAGGCAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTAATTACAGGCCATATTaGCTTTGTGAACACGCACCA +
Preference number: 5 (lower is better)
Translates to: STALESRLKGTTAPFSCINYRPY*LCEHAP
Trigger: TGGTGCGTGTTCACAAAGCAAATATGGCCTGTAATT...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATCCATGCAGCCAAGATTaGGAGGTACTGAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNPCSQD*EVLRLK
Trigger: CTTCAACCTCAGTACCTCCAAATCTTGGCTGCATGG...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS TCA 90 bp CTTGCACATGCAGAAATGATTAAGCACACAGCAAGCAGGATTGCCTaGAAGAAGACCTCTTGCAACAACCTGGTTTCATTTCCATTGCAA +
Preference number: 5 (lower is better)
Translates to: LAHAEMIKHTASRIA*KKTSCNNLVSFPLQ
Trigger: TTGCAATGGAAATGAAACCAGGTTGTTGCAAGAGGTCTTCTTTCAGGCAATCCTGCTTGCTGTGTGCTTAATCATTTCTGCATGTGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377901.8
CDS CCA 90 bp AAATTGCTACTGGTGTTGACATCAGTTGAGATATTCGGTACATCTTaGGAAGGCCGCTTGCTCAAACTTCACAGATTCTCTTCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: KLLLVLTSVEIFGTS*EGRLLKLHRFSSSH
Trigger: GTGAGAAGAAGAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519016.5
CDS-3UTR CAA 90 bp TCACATAGTCAAACTAAAATGGCTTTTTCTCCATTACTCGCTTACTCCCTTCCAGATATTCGGTACATCTaGGGAAGGCCGCTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: SHSQTKMAFSPLLAYSLPDIRYI*GRPLAQ
Trigger: TTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATC...TGGAAGGGAGTAAGCGAGTAATGGAGAAAAAGCCATTTTAGTTTGACTATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp AAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCTTACCAACCTGGAAGAACTaGCTACTGGTGTTGACATCA +
Preference number: 5 (lower is better)
Translates to: KLLTEFPNENSSSRTTALPTWKN*LLVLTS
Trigger: TGATGTCAACACCAGTAGCAAGTTCTTCCAGGTTGG...TAAGGCAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGCCAACCTGGAAGAACTaGCTACTGGTGTTGACATCA +
Preference number: 5 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLPTWKN*LLVLTS
Trigger: TGATGTCAACACCAGTAGCAAGTTCTTCCAGGTTGG...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCGTTATGTTGCCATCTTaGTCGCACAGGAAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFVMLPS*SHRKLS
Trigger: AGACAGCTTCCTGTGCGACAAAGATGGCAACATAAC...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGGTTATGTTGCCATCTTaGTCGCACAGGAAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLVMLPS*SHRKLS
Trigger: AGACAGCTTCCTGTGCGACAAAGATGGCAACATAAC...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp ATGCATTTGAAAGCGCATTGGTGTTTTGCCTATATTTTGCCCTCAAGGCATTTTGGGTTCAGAGTTATGTaGCCATCTTTGTCGCACAGG +
Preference number: 5 (lower is better)
Translates to: MHLKAHWCFAYILPSRHFGFRVM*PSLSHR
Trigger: CCTGTGCGACAAAGATGGCAACATAACTCTGAACCC...AAAATGCCTTGAGGGCAAAATATAGGCAAAACACCAATGCGCTTTCAAATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp ACTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCACCATGCAGCCAAGATTaGGAGGTACTAACTAAGTTC +
Preference number: 5 (lower is better)
Translates to: TASWTISRYSDGGHSSKAPCSQD*EVLTKF
Trigger: GAACTTAGTTAGTACCTCCAAATCTTGGCTGCATGG...TGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356838.7
CDS-3UTR CAA 90 bp TCTACAGCCCTTGAGTCAAGGCTCAAGGGTACAACTGCACCATTTTCATGCATTTCACTTGGAGAAGAGTaGATGTCACCAAAGATACTT +
Preference number: 5 (lower is better)
Translates to: STALESRLKGTTAPFSCISLGEE*MSPKIL
Trigger: AAGTATCTTTGGTGACATCAACTCTTCTCCAAGTGA...AATGCATGAAAATGGTGCAGTTGTACCCTTGAGCCTTGACTCAAGGGCTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGACACAGCAAGCAGGATaGCCTGAAAGAAGACCTCTT +
Preference number: 5 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLTQQAG*PERRPL
Trigger: AAGAGGTCTTCTTTCAGGCAATCCTGCTTGCTGTGT...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTCCATGCAGCCAAGATTaGGAGGTACTGAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: LLAYSLPIKHLIPSRLQVPCSQD*EVLRLK
Trigger: CTTCAACCTCAGTACCTCCAAATCTTGGCTGCATGG...AACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377901.8
ENST00000677595.1
CDS TCA 90 bp ATCACAGTTCTTCTACATTTACTTGCTACTGGTGTTGACATCAGTTaGGATATTCGGTACATCTTGGGAAGGCCGCTTGCTCAAACTTCA +
Preference number: 5 (lower is better)
Translates to: ITVLLHLLATGVDIS*DIRYILGRPLAQTS
Trigger: TGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTAAATGTAGAAGAACTGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522594.1
CDS TCA 90 bp ATAATTGCGTATCACAGTTCTTCTACATTTACTTGCTACTGGTGTTaGCATCAGTTGAGATATTCGGTACATCTTGGGAAGGCCGCTTGC +
Preference number: 5 (lower is better)
Translates to: IIAYHSSSTFTCYWC*HQLRYSVHLGKAAC
Trigger: GCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTAAATGTAGAAGAACTGTGATACGCAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522594.1
CDS GCA 90 bp TTGTCTTCACTTGGAGAAGAGTTGATGTCACCAAAGATACTTCCATaGAGCCAAGATTTGGAGGTACTGAGGTTGAAGAGAGAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: LSSLGEELMSPKILP*SQDLEVLRLKREEK
Trigger: CTTTTCTTCTCTCTTCAACCTCAGTACCTCCAAATCTTGGCTGCATGGAAGTATCTTTGGTGACATCAACTCTTCTCCAAGTGAAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377901.8
ENST00000522334.5
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGATCTTGGGAAGGCCGCTaGCTCAAACTTCACAGATTC +
Preference number: 5 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRSWEGR*LKLHRF
Trigger: GAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGA...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TCACATAGTCAAACTAAAATGGCTTTTTCTCCATTACTCGCTTACTCCCTTCCAGTTATGTTGCCATCTTaGTCGCACAGGAAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: SHSQTKMAFSPLLAYSLPVMLPS*SHRKLS
Trigger: AGACAGCTTCCTGTGCGACAAAGATGGCAACATAAC...TGGAAGGGAGTAAGCGAGTAATGGAGAAAAAGCCATTTTAGTTTGACTATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGTCATCTGCATTTCCATaGCAATGGTCTGTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLSSAFP*QWSVSN
Trigger: GTTGGACACAGACCATTGCAATGGAAATGCAGATGA...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCTCATCTGCATTTCCATaGCAATGGTCTGTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFSSAFP*QWSVSN
Trigger: GTTGGACACAGACCATTGCAATGGAAATGCAGATGA...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp ATGCATTTGAAAGCGCATTGGTGTTTTGCCTATATTTTGCCCTCAAGGCATTTTACACAGCAAGCAGGATaGCCTGAAAGAAGACCTCTT +
Preference number: 5 (lower is better)
Translates to: MHLKAHWCFAYILPSRHFTQQAG*PERRPL
Trigger: AAGAGGTCTTCTTTCAGGCAATCCTGCTTGCTGTGT...AAAATGCCTTGAGGGCAAAATATAGGCAAAACACCAATGCGCTTTCAAATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp AGAAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACATCTACAGCCCTaGAGTCAAGGCTCAAGGGTA +
Preference number: 5 (lower is better)
Translates to: RNLVTSSSQNFLMKIQAREHLQP*SQGSRV
Trigger: TACCCTTGAGCCTTGACTCAAGGGCTGTAGATGTTC...TCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp CTGCAAGTTGGACAATTTCCAGATATTCAGATGGAGGACATTCATCGAAGGCATAATTACAGGCCATATTaGCTTTGTGAACACGCACCA +
Preference number: 5 (lower is better)
Translates to: LQVGQFPDIQMEDIHRRHNYRPY*LCEHAP
Trigger: TGGTGCGTGTTCACAAAGCAAATATGGCCTGTAATT...ATGCCTTCGATGAATGTCCTCCATCTGAATATCTGGAAATTGTCCAACTTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGACCATGCAGCCAAGATTaGGAGGTACTGAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRPCSQD*EVLRLK
Trigger: CTTCAACCTCAGTACCTCCAAATCTTGGCTGCATGG...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS TCA 90 bp TGTCTTCGGCAGCCTCTTGTTCTCTTGTCTGTTTCCTGGTATAAATaGGTGTATAGTTCTTGGGAAAGTCAGTCTTACAACTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: CLRQPLVLLSVSWYK*VYSSWESQSYNFSC
Trigger: ACAAGAGAAGTTGTAAGACTGACTTTCCCAAGAACTATACACTCATTTATACCAGGAAACAGACAAGAGAACAAGAGGCTGCCGAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519016.5
ENST00000522334.5
ENST00000522594.1
CDS CCA 90 bp TTTCTAAATATCCTAACTAAGTTCTCCTTATACATAACGCTGGTCTaGGATGGGTTCAGAGTTATGTTGCCATCTTTGTCGCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: FLNILTKFSLYITLV*DGFRVMLPSLSHRK
Trigger: CTTCCTGTGCGACAAAGATGGCAACATAACTCTGAACCCATCCCAGACCAGCGTTATGTATAAGGAGAACTTAGTTAGGATATTTAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522334.5
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCGCTTGCAGAGAAGTTTaGTCTTCGGCAGCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFACREV*SSAASC
Trigger: ACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGC...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGACCAACCTGGAAGAACTaGCTACTGGTGTTGACATCA +
Preference number: 5 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRPTWKN*LLVLTS
Trigger: TGATGTCAACACCAGTAGCAAGTTCTTCCAGGTTGG...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp AGAAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGACCAACCTGGAAGAACTaGCTACTGGTGTTGACATCA +
Preference number: 5 (lower is better)
Translates to: RNLVTSSSQNFLMKIQARPTWKN*LLVLTS
Trigger: TGATGTCAACACCAGTAGCAAGTTCTTCCAGGTTGG...TCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGATCCGAACTATTCTCTaGGAAACGTTCAGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLIRTIL*ETFRSC
Trigger: ACAGCTTCTGAACGTTTCCAAGAGAATAGTTCGGAT...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCATCCGAACTATTCTCTaGGAAACGTTCAGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFIRTIL*ETFRSC
Trigger: ACAGCTTCTGAACGTTTCCAAGAGAATAGTTCGGAT...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACACAGCAAGCAGGATaGCCTGAAAGAAGACCTCTT +
Preference number: 5 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRTQQAG*PERRPL
Trigger: AAGAGGTCTTCTTTCAGGCAATCCTGCTTGCTGTGT...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCAAGCGCATTGGTGTTTaGCCTATATTTTGCCCTCAA +
Preference number: 5 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFKRIGV*PIFCPQ
Trigger: TTGAGGGCAAAATATAGGCAAAACACCAATGCGCTT...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp ACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACACCATTTTCATGCATTaGAAAGCGCATTGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: TIIYGYHLISSHSTEVNDTIFMH*KAHWCF
Trigger: AAAACACCAATGCGCTTTCAAATGCATGAAAATGGT...GTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATAATTACAGGCCATATTaGCTTTGTGAACACGCACCA +
Preference number: 5 (lower is better)
Translates to: LTIIYGYHLISSHSTEVNNYRPY*LCEHAP
Trigger: TGGTGCGTGTTCACAAAGCAAATATGGCCTGTAATT...ATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCCTGAAAGAAGACCTCTaGCAACAACCTGGTTTCATT +
Preference number: 5 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFLKEDL*QQPGFI
Trigger: AATGAAACCAGGTTGTTGCAAGAGGTCTTCTTTCAG...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377901.8
CDS-3UTR CAA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCGTTATGTTGCCATCTTaGTCGCACAGGAAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFVMLPS*SHRKLS
Trigger: AGACAGCTTCCTGTGCGACAAAGATGGCAACATAAC...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp GTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGAACCACTGTCACTTGGAGAAGAGTaGATGTCACCAAAGATACTT +
Preference number: 5 (lower is better)
Translates to: VTSSSQNFLMKIQAREPLSLGEE*MSPKIL
Trigger: AAGTATCTTTGGTGACATCAACTCTTCTCCAAGTGA...CAGTGGTTCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGTCACTTGGAGAAGAGTaGATGTCACCAAAGATACTT +
Preference number: 5 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLSLGEE*MSPKIL
Trigger: AAGTATCTTTGGTGACATCAACTCTTCTCCAAGTGA...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGATCATCTGCATTTCCATaGCAATGGTCTGTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRSSAFP*QWSVSN
Trigger: GTTGGACACAGACCATTGCAATGGAAATGCAGATGA...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp ATGCATTTGAAAGCGCATTGGTGTTTTGCCTATATTTTGCCCTCAAGGCATTTTATCCGAACTATTCTCTaGGAAACGTTCAGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: MHLKAHWCFAYILPSRHFIRTIL*ETFRSC
Trigger: ACAGCTTCTGAACGTTTCCAAGAGAATAGTTCGGAT...AAAATGCCTTGAGGGCAAAATATAGGCAAAACACCAATGCGCTTTCAAATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTTTGCAAGTAGACTGCAAGTaGGACAATTTCCAGATATTC +
Preference number: 5 (lower is better)
Translates to: YGYHLISSHSTEVNDKLLQVDCK*DNFQIF
Trigger: GAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG...CAAAAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS CCA 90 bp ACACAAGTCAACTTCATTATCAAGTTTCAAACAGTGCTTGGAGATTaGTGTCTGTCTTTTTCCCAACAACTTGAACCATTGACAGGTAGT +
Preference number: 5 (lower is better)
Translates to: TQVNFIIKFQTVLGD*CLSFSQQLEPLTGS
Trigger: ACTACCTGTCAATGGTTCAAGTTGTTGGGAAAAAGACAGACACCAATCTCCAAGCACTGTTTGAAACTTGATAATGAAGTTGACTTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519187.5
CDS-3UTR CAA 90 bp TCACATAGTCAAACTAAAATGGCTTTTTCTCCATTACTCGCTTACTCCCTTCCACAAGTAGACTGCAAGTaGGACAATTTCCAGATATTC +
Preference number: 5 (lower is better)
Translates to: SHSQTKMAFSPLLAYSLPQVDCK*DNFQIF
Trigger: GAATATCTGGAAATTGTCCAACTTGCAGTCTACTTG...TGGAAGGGAGTAAGCGAGTAATGGAGAAAAAGCCATTTTAGTTTGACTATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp TCTCCATTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGTGTTTTGCCTATATTTaGCCCTCAAGGCATTTTTCT +
Preference number: 5 (lower is better)
Translates to: SPLLAYSLPIKHLIPSRLCFAYI*PSRHFS
Trigger: AGAAAAATGCCTTGAGGGCAAAATATAGGCAAAACA...CAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAATGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp TCCATTTTCATATTAACCATCATCTACGGTTACCACCTAATATCAAGTCACTCCAAGCGCATTGGTGTTTaGCCTATATTTTGCCCTCAA +
Preference number: 5 (lower is better)
Translates to: SIFILTIIYGYHLISSHSKRIGV*PIFCPQ
Trigger: TTGAGGGCAAAATATAGGCAAAACACCAATGCGCTT...GGAGTGACTTGATATTAGGTGGTAACCGTAGATGATGGTTAATATGAAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTAAAGAATCATAGGGGGACATTTATTCCAGGCGGTCTCTTTTCCATCACATTCGCATTTGAAAGCGCATaGGTGTTTTGCCTATATTTT +
Preference number: 5 (lower is better)
Translates to: LKNHRGTFIPGGLFSITFAFESA*VFCLYF
Trigger: AAAATATAGGCAAAACACCAATGCGCTTTCAAATGC...GAATGTGATGGAAAAGAGACCGCCTGGAATAAATGTCCCCCTATGATTCTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp ATCTACGGTTACCACCTAATATCAAGTCACTCCACTGAGGTGAATGACAAACTTACCATTTTCATGCATTaGAAAGCGCATTGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: IYGYHLISSHSTEVNDKLTIFMH*KAHWCF
Trigger: AAAACACCAATGCGCTTTCAAATGCATGAAAATGGT...AAGTTTGTCATTCACCTCAGTGGAGTGACTTGATATTAGGTGGTAACCGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TCACATAGTCAAACTAAAATGGCTTTTTCTCCATTACTCGCTTACTCCCTTCCACTTCCAATAAAACACTaGATTCCAAGTAGACTGCAA +
Preference number: 5 (lower is better)
Translates to: SHSQTKMAFSPLLAYSLPLPIKH*IPSRLQ
Trigger: TTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAG...TGGAAGGGAGTAAGCGAGTAATGGAGAAAAAGCCATTTTAGTTTGACTATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp ATGCATTTGAAAGCGCATTGGTGTTTTGCCTATATTTTGCCCTCAAGGCATTTTCTTCCAATAAAACACTaGATTCCAAGTAGACTGCAA +
Preference number: 5 (lower is better)
Translates to: MHLKAHWCFAYILPSRHFLPIKH*IPSRLQ
Trigger: TTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAG...AAAATGCCTTGAGGGCAAAATATAGGCAAAACACCAATGCGCTTTCAAATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp TTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTCTTCCAATAAAACACTaGATTCCAAGTAGACTGCAA +
Preference number: 5 (lower is better)
Translates to: LLAYSLPIKHLIPSRLQVLPIKH*IPSRLQ
Trigger: TTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAG...AACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp TTACTCGCTTACTCCCTTCCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTTGTTTTGCCTATATTTaGCCCTCAAGGCATTTTTCT +
Preference number: 5 (lower is better)
Translates to: LLAYSLPIKHLIPSRLQVCFAYI*PSRHFS
Trigger: AGAAAAATGCCTTGAGGGCAAAATATAGGCAAAACA...AACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAGGGAGTAAGCGAGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCTCACTTGGAGAAGAGTaGATGTCACCAAAGATACTT +
Preference number: 5 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFSLGEE*MSPKIL
Trigger: AAGTATCTTTGGTGACATCAACTCTTCTCCAAGTGA...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGACTTCCAATAAAACACTaGATTCCAAGTAGACTGCAA +
Preference number: 5 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRLPIKH*IPSRLQ
Trigger: TTGCAGTCTACTTGGAATCAAGTGTTTTATTGGAAG...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp AAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGATGTTTTGCCTATATTTaGCCCTCAAGGCATTTTTCT +
Preference number: 5 (lower is better)
Translates to: KSGYKLLTEFPNENSSSRCFAYI*PSRHFS
Trigger: AGAAAAATGCCTTGAGGGCAAAATATAGGCAAAACA...TCTCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp AGAAATCTGGTTACAAGCTCCTCACAGAATTTCCTAATGAAAATTCAAGCTCGAGCATTTGAAAGCGCATaGGTGTTTTGCCTATATTTT +
Preference number: 5 (lower is better)
Translates to: RNLVTSSSQNFLMKIQARAFESA*VFCLYF
Trigger: AAAATATAGGCAAAACACCAATGCGCTTTCAAATGC...TCGAGCTTGAATTTTCATTAGGAAATTCTGTGAGGAGCTTGTAACCAGATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS-3UTR CAA 90 bp CCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTTGTTTTGCCTATATTTaGCCCTCAAGGCATTTTTCT +
Preference number: 5 (lower is better)
Translates to: PIKHLIPSRLQVGQFPDICFAYI*PSRHFS
Trigger: AGAAAAATGCCTTGAGGGCAAAATATAGGCAAAACA...AATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp CCAATAAAACACTTGATTCCAAGTAGACTGCAAGTTGGACAATTTCCAGATATTGCATTTGAAAGCGCATaGGTGTTTTGCCTATATTTT +
Preference number: 5 (lower is better)
Translates to: PIKHLIPSRLQVGQFPDIAFESA*VFCLYF
Trigger: AAAATATAGGCAAAACACCAATGCGCTTTCAAATGC...AATATCTGGAAATTGTCCAACTTGCAGTCTACTTGGAATCAAGTGTTTTATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS-3UTR CAA 90 bp TTTTCCTTTCAACTGCCGGTGTTTGCAAAGGGAAGGCAAATTAATATTATTTTCACCATTTTCATGCATTaGAAAGCGCATTGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: FSFQLPVFAKGRQINIIFTIFMH*KAHWCF
Trigger: AAAACACCAATGCGCTTTCAAATGCATGAAAATGGT...GAAAATAATATTAATTTGCCTTCCCTTTGCAAACACCGGCAGTTGAAAGGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS GCA 72 bp TTCTCACAGATGCCCACGCACATTGCTGTGCACAGGTaGTTGCAGAGAAGTTTTGTCTTCGGCAGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: FSQMPTHIAVHR*LQRSFVFGSLL
Trigger: CAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000519304.1
ENST00000522334.5
ENST00000522594.1
ENST00000523829.5
ENST00000677595.1
CDS CAA 72 bp TCACAGATGCCCACGCACATTGCTGTGCACAGGTGCTaGCAGAGAAGTTTTGTCTTCGGCAGCCTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: SQMPTHIAVHRC*QRSFVFGSLLF
Trigger: GAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000519304.1
ENST00000522334.5
ENST00000522594.1
ENST00000523829.5
ENST00000677595.1
CDS CAA 90 bp CTCTTCTTCTCACAGATGCCCACGCACATTGCTGTGCACAGGTGCTaGCAGAGAAGTTTTGTCTTCGGCAGCCTCTTGTTCTCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: LFFSQMPTHIAVHRC*QRSFVFGSLLFSCL
Trigger: CAGACAAGAGAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522594.1
ENST00000677595.1
CDS CAA 90 bp TTTATCAGCCTGGACATTCCTTCTTCTCACAGATGCCCACGCACATaGCTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: FISLDIPSSHRCPRT*LCTGACREVLSSAA
Trigger: GGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAATGTCCAGGCTGATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519187.5
CDS CAA 90 bp TCCTTCTTCTCACAGATGCCCACGCACATTGCTGTGCACAGGTGCTaGCAGAGAAGTTTTGTCTTCGGCAGCCTCTTGTTCTCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: SFFSQMPTHIAVHRC*QRSFVFGSLLFSCL
Trigger: CAGACAAGAGAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS CAA 90 bp ACCTTCTTCTCACAGATGCCCACGCACATTGCTGTGCACAGGTGCTaGCAGAGAAGTTTTGTCTTCGGCAGCCTCTTGTTCTCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: TFFSQMPTHIAVHRC*QRSFVFGSLLFSCL
Trigger: CAGACAAGAGAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522334.5
CDS TCA 72 bp GGAAGCTGTCTTCAGTCCAAATATAGTAGCCATTGGTaGGGAGTCTGGGACTTCGGCGACAGGTATAGTGGG +
Preference number: 6 (lower is better)
Translates to: GSCLQSKYSSHW*GVWDFGDRYSG
Trigger: CCCACTATACCTGTCGCCGAAGTCCCAGACTCCTCACCAATGGCTACTATATTTGGACTGAAGACAGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000519187.5
ENST00000519304.1
ENST00000522334.5
ENST00000523829.5
ENST00000677595.1
CDS GCA 72 bp CTTCCTTCTTCTCACAGATGCCCACGCACATTGCTGTaGACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCA +
Preference number: 6 (lower is better)
Translates to: LPSSHRCPRTLL*TGACREVLSSA
Trigger: TGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS GCA 72 bp GAACCTTCTTCTCACAGATGCCCACGCACATTGCTGTaGACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCA +
Preference number: 6 (lower is better)
Translates to: EPSSHRCPRTLL*TGACREVLSSA
Trigger: TGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522334.5
CDS CAA 90 bp CTCAAACTTCACAGATTCTCTTCTTCTCACAGATGCCCACGCACATaGCTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: LKLHRFSSSHRCPRT*LCTGACREVLSSAA
Trigger: GGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGAGAATCTGTGAAGTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522594.1
ENST00000523829.5
ENST00000677595.1
CDS TCA 72 bp TTCTCTTGGAAACGTTCAGAAGCTGTCAACTGGGACTaGAGAGACAAGCTATGGGAGTTTCCTCCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: FSWKRSEAVNWD*RDKLWEFPPGG
Trigger: GCCTCCTGGAGGAAACTCCCATAGCTTGTCTCTTCAGTCCCAGTTGACAGCTTCTGAACGTTTCCAAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000522780.5
ENST00000523829.5
ENST00000677595.1
CDS GCA 72 bp TTCTCTTCTTCTCACAGATGCCCACGCACATTGCTGTaGACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCA +
Preference number: 6 (lower is better)
Translates to: FSSSHRCPRTLL*TGACREVLSSA
Trigger: TGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522594.1
ENST00000523829.5
ENST00000677595.1
CDS GCA 72 bp ATTCCTTCTTCTCACAGATGCCCACGCACATTGCTGTaGACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCA +
Preference number: 6 (lower is better)
Translates to: IPSSHRCPRTLL*TGACREVLSSA
Trigger: TGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519187.5
CDS GCA 72 bp GTTTTTATCAGCCTGGACATTCCTTCTTCTCACAGATaGCCACGCACATTGCTGTGCACAGGTGCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: VFISLDIPSSHR*PRTLLCTGACR
Trigger: TCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAATGTCCAGGCTGATAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519187.5
CDS GCA 72 bp CGAAGCTTCCTTCTTCTCACAGATGCCCACGCACATTaGTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCTT +
Preference number: 6 (lower is better)
Translates to: RSFLLLTDAHAH*CAQVLAEKFCL
Trigger: AAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAAGCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS GCA 72 bp TTCGTTGAGTTCTCACCAGGTGCTGCAAGCTTCCTGTaGATTCTCCTGTTTAATCCTCACCCATCGTGTGGT +
Preference number: 6 (lower is better)
Translates to: FVEFSPGAASFL*ILLFNPHPSCG
Trigger: ACCACACGATGGGTGAGGATTAAACAGGAGAATGCACAGGAAGCTTGCAGCACCTGGTGAGAACTCAACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522780.5
ENST00000524079.5
CDS CAA 72 bp CGCACATTGCTGTGCACAGGTGCTTGCAGAGAAGTTTaGTCTTCGGCAGCCTCTTGTTCTCTTGTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: RTLLCTGACREV*SSAASCSLVCF
Trigger: GAAACAGACAAGAGAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000519304.1
ENST00000522334.5
ENST00000522594.1
ENST00000677595.1
CDS CAA 72 bp CTGGACATTCCTTCTTCTCACAGATGCCCACGCACATaGCTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCT +
Preference number: 6 (lower is better)
Translates to: LDIPSSHRCPRT*LCTGACREVLS
Trigger: AGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAATGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519187.5
CDS CAA 72 bp ACGAAGCTTCCTTCTTCTCACAGATGCCCACGCACATaGCTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCT +
Preference number: 6 (lower is better)
Translates to: TKLPSSHRCPRT*LCTGACREVLS
Trigger: AGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAAGCTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS CAA 72 bp CTGGAAGAACCTTCTTCTCACAGATGCCCACGCACATaGCTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCT +
Preference number: 6 (lower is better)
Translates to: LEEPSSHRCPRT*LCTGACREVLS
Trigger: AGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGTTCTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522334.5
CDS GCA 72 bp TGGACATTCCTTCTTCTCACAGATGCCCACGCACATTaGTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCTT +
Preference number: 6 (lower is better)
Translates to: WTFLLLTDAHAH*CAQVLAEKFCL
Trigger: AAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGAATGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519187.5
CDS GCA 72 bp TGGAAGAACCTTCTTCTCACAGATGCCCACGCACATTaGTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCTT +
Preference number: 6 (lower is better)
Translates to: WKNLLLTDAHAH*CAQVLAEKFCL
Trigger: AAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGGTTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522334.5
CDS CAA 72 bp CACAGATTCTCTTCTTCTCACAGATGCCCACGCACATaGCTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCT +
Preference number: 6 (lower is better)
Translates to: HRFSSSHRCPRT*LCTGACREVLS
Trigger: AGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGAGAATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522594.1
ENST00000523829.5
ENST00000677595.1
CDS CAA 72 bp TACATAACGCTGGTCTGGGATGGGTTCAGAGTTATGTaGCCATCTTTGTCGCACAGGAAGCTGTCTTCAGTC +
Preference number: 6 (lower is better)
Translates to: YITLVWDGFRVM*PSLSHRKLSSV
Trigger: GACTGAAGACAGCTTCCTGTGCGACAAAGATGGCAACATAACTCTGAACCCATCCCAGACCAGCGTTATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000519187.5
ENST00000522334.5
ENST00000523829.5
ENST00000677595.1
CDS CAA 90 bp GTGTTGACATCAGTTGAGATATTCGGTACATCTTGGGAAGGCCGCTaGCTCAAACTTCACAGATTCTCTTCTTCTCACAGATGCCCACGC +
Preference number: 6 (lower is better)
Translates to: VLTSVEIFGTSWEGR*LKLHRFSSSHRCPR
Trigger: GCGTGGGCATCTGTGAGAAGAAGAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522594.1
ENST00000523829.5
ENST00000677595.1
CDS CAA 90 bp CCATTGCAATGGTCTGTGTCCAACCTCCTGGTCCCCTTCAACCAGTaGTCTTCACTTGGAGAAGAGTTGATGTCACCAAAGATACTTCCA +
Preference number: 6 (lower is better)
Translates to: PLQWSVSNLLVPFNQ*SSLGEELMSPKILP
Trigger: TGGAAGTATCTTTGGTGACATCAACTCTTCTCCAAGTGAAGACAACTGGTTGAAGGGGACCAGGAGGTTGGACACAGACCATTGCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000523829.5
ENST00000677595.1
CDS CAA 90 bp GTGTTGACATCAGTTGAGATATTCGGTACATCTTGGGAAGGCCGCTaGCTCAAACTTCACAGATTCTGTGTTCCTTCCAAAGGGAGTTCC +
Preference number: 6 (lower is better)
Translates to: VLTSVEIFGTSWEGR*LKLHRFCVPSKGSS
Trigger: GGAACTCCCTTTGGAAGGAACACAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS TCA 72 bp AACCTGGAAGAACTTGCTACTGGTGTTGACATCAGTTaGGATATTCGGTACATCTTGGGAAGGCCGCTTGCT +
Preference number: 6 (lower is better)
Translates to: NLEELATGVDIS*DIRYILGRPLA
Trigger: AGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTTCTTCCAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000519187.5
ENST00000519304.1
ENST00000523829.5
ENST00000677595.1
CDS GCA 72 bp ACAGATTCTCTTCTTCTCACAGATGCCCACGCACATTaGTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCTT +
Preference number: 6 (lower is better)
Translates to: TDSLLLTDAHAH*CAQVLAEKFCL
Trigger: AAGACAAAACTTCTCTGCAAGCACCTGTGCACAGCAATGTGCGTGGGCATCTGTGAGAAGAAGAGAATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522594.1
ENST00000523829.5
ENST00000677595.1
CDS CAA 72 bp GCACACAGCAAGCAGGATTGCCTGAAAGAAGACCTCTaGCAACAACCTGGTTTCATTTCCATTGCAATGGTC +
Preference number: 6 (lower is better)
Translates to: AHSKQDCLKEDL*QQPGFISIAMV
Trigger: GACCATTGCAATGGAAATGAAACCAGGTTGTTGCAAGAGGTCTTCTTTCAGGCAATCCTGCTTGCTGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377901.8
CDS TCA 72 bp ATCACAGGTGAAATTGCTACTGGTGTTGACATCAGTTaGGATATTCGGTACATCTTGGGAAGGCCGCTTGCT +
Preference number: 6 (lower is better)
Translates to: ITGEIATGVDIS*DIRYILGRPLA
Trigger: AGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAATTTCACCTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519016.5
CDS GCA 72 bp CAGTTGAGATATTCGGTACATCTTGGGAAGGCCGCTTaGTCAAACTTCACAGATTCTGTGTTCCTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: QLRYSVHLGKAA*SNFTDSVFLPK
Trigger: CTTTGGAAGGAACACAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS CCA 72 bp CTGGTGTTGACATCAGTTGAGATATTCGGTACATCTTaGGAAGGCCGCTTGCTCAAACTTCACAGATTCTCT +
Preference number: 6 (lower is better)
Translates to: LVLTSVEIFGTS*EGRLLKLHRFS
Trigger: AGAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522594.1
ENST00000523829.5
ENST00000677595.1
CDS CCA 72 bp CTGGTGTTGACATCAGTTGAGATATTCGGTACATCTTaGGAAGGCCGCTTGCTCAAACTTCACAGATTCTGT +
Preference number: 6 (lower is better)
Translates to: LVLTSVEIFGTS*EGRLLKLHRFC
Trigger: ACAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519187.5
ENST00000519304.1
CDS CAA 90 bp GCTGTGCACAGGTGCTTGCAGAGAAGTTTTGTCTTCGGCAGCCTCTaGTTCTCTTGTCTGTTTCCTGGTATAAATGAGTGTATAGTTCTT +
Preference number: 6 (lower is better)
Translates to: AVHRCLQRSFVFGSL*FSCLFPGINECIVL
Trigger: AAGAACTATACACTCATTTATACCAGGAAACAGACAAGAGAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCTGTGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519016.5
ENST00000522334.5
ENST00000522594.1
CDS TCA 72 bp GCAGAAATGATTAAGCACACAGCAAGCAGGATTGCCTaGAAGAAGACCTCTTGCAACAACCTGGTTTCTGAA +
Preference number: 6 (lower is better)
Translates to: AEMIKHTASRIA*KKTSCNNLVSE
Trigger: TTCAGAAACCAGGTTGTTGCAAGAGGTCTTCTTTCAGGCAATCCTGCTTGCTGTGTGCTTAATCATTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356838.7
ENST00000522780.5
ENST00000523829.5
ENST00000677595.1
CDS TCA 72 bp CTTCTACATTTACTTGCTACTGGTGTTGACATCAGTTaGGATATTCGGTACATCTTGGGAAGGCCGCTTGCT +
Preference number: 6 (lower is better)
Translates to: LLHLLATGVDIS*DIRYILGRPLA
Trigger: AGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTAAATGTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522594.1
CDS GCA 72 bp CTTGGAGAAGAGTTGATGTCACCAAAGATACTTCCATaGAGCCAAGATTTGGAGGTACTGAGGTTGAAGAGA +
Preference number: 6 (lower is better)
Translates to: LGEELMSPKILP*SQDLEVLRLKR
Trigger: TCTCTTCAACCTCAGTACCTCCAAATCTTGGCTGCATGGAAGTATCTTTGGTGACATCAACTCTTCTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377901.8
ENST00000522334.5
ENST00000523829.5
ENST00000677595.1
CDS CAA 72 bp AGGTGCTTGCAGAGAAGTTTTGTCTTCGGCAGCCTCTaGTTCTCTTGTCTGTTTCCTGGTATAAATGAGTGT +
Preference number: 6 (lower is better)
Translates to: RCLQRSFVFGSL*FSCLFPGINEC
Trigger: ACACTCATTTATACCAGGAAACAGACAAGAGAACAAGAGGCTGCCGAAGACAAAACTTCTCTGCAAGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519016.5
ENST00000522334.5
ENST00000522594.1
CDS CAA 72 bp CCATCCAGGGAATCACAGGTGAAATTGCTACTGGTGTaGACATCAGTTGAGATATTCGGTACATCTTGGGAA +
Preference number: 6 (lower is better)
Translates to: PSRESQVKLLLV*TSVEIFGTSWE
Trigger: TTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAATTTCACCTGTGATTCCCTGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519016.5
CDS CAA 72 bp TCAGTTGAGATATTCGGTACATCTTGGGAAGGCCGCTaGCTCAAACTTCACAGATTCTGTGTTCCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: SVEIFGTSWEGR*LKLHRFCVPSK
Trigger: TTTGGAAGGAACACAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS TCA 72 bp GCAGAAATGATTAAGCACACAGCAAGCAGGATTGCCTaGAAGAAGACCTCTTGCAACAACCTGGTTTCATTT +
Preference number: 6 (lower is better)
Translates to: AEMIKHTASRIA*KKTSCNNLVSF
Trigger: AAATGAAACCAGGTTGTTGCAAGAGGTCTTCTTTCAGGCAATCCTGCTTGCTGTGTGCTTAATCATTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377901.8
CDS CCA 72 bp GTACTAACTAAGTTCTCCTTATACATAACGCTGGTCTaGGATGGGTTCAGAGTTATGTTGCCATCTTTGTCG +
Preference number: 6 (lower is better)
Translates to: VLTKFSLYITLV*DGFRVMLPSLS
Trigger: CGACAAAGATGGCAACATAACTCTGAACCCATCCCAGACCAGCGTTATGTATAAGGAGAACTTAGTTAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356838.7
CDS CCA 72 bp TTCAGATGGAGGACATTCATCGAAGGCATTCCTAAATaGTTGTCAAATTTTGACAAACCGAGCACAGGCAGT +
Preference number: 6 (lower is better)
Translates to: FRWRTFIEGIPK*LSNFDKPSTGS
Trigger: ACTGCCTGTGCTCGGTTTGTCAAAATTTGACAACCATTTAGGAATGCCTTCGATGAATGTCCTCCATCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356838.7
ENST00000377901.8
ENST00000677595.1
CDS CCA 72 bp ATCCTAACTAAGTTCTCCTTATACATAACGCTGGTCTaGGATGGGTTCAGAGTTATGTTGCCATCTTTGTCG +
Preference number: 6 (lower is better)
Translates to: ILTKFSLYITLV*DGFRVMLPSLS
Trigger: CGACAAAGATGGCAACATAACTCTGAACCCATCCCAGACCAGCGTTATGTATAAGGAGAACTTAGTTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377901.8
ENST00000517538.1
ENST00000519016.5
ENST00000522334.5
ENST00000523829.5
ENST00000677595.1
CDS CAA 90 bp GATAATTGCGTATCACAGTTCTTCTACATTTACTTGCTACTGGTGTaGACATCAGTTGAGATATTCGGTACATCTTGGGAAGGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: DNCVSQFFYIYLLLV*TSVEIFGTSWEGRL
Trigger: CAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTAAATGTAGAAGAACTGTGATACGCAATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522594.1
CDS TCA 72 bp CAGCCTCTTGTTCTCTTGTCTGTTTCCTGGTATAAATaGGTGTATAGTTCTTGGGAAAGTCAGTCTTACAAC +
Preference number: 6 (lower is better)
Translates to: QPLVLLSVSWYK*VYSSWESQSYN
Trigger: GTTGTAAGACTGACTTTCCCAAGAACTATACACTCATTTATACCAGGAAACAGACAAGAGAACAAGAGGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519016.5
ENST00000522334.5
ENST00000522594.1
CDS TCA 72 bp TCCTTCCAAAGGGAGTTCCCAGCCTCTTCTTCCAATTaGCAAAGGACAAAATTATTACTGAAATACGAAGCT +
Preference number: 6 (lower is better)
Translates to: SFQREFPASSSN*QRTKLLLKYEA
Trigger: AGCTTCGTATTTCAGTAATAATTTTGTCCTTTGTCAATTGGAAGAAGAGGCTGGGAACTCCCTTTGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519304.1
CDS GCA 72 bp CAGTTGAGATATTCGGTACATCTTGGGAAGGCCGCTTaGTCAAACTTCACAGATTCTGTGTATTTTAATCAT +
Preference number: 6 (lower is better)
Translates to: QLRYSVHLGKAA*SNFTDSVYFNH
Trigger: ATGATTAAAATACACAGAATCTGTGAAGTTTGAGCAAGCGGCCTTCCCAAGATGTACCGAATATCTCAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519187.5
CDS TCA 72 bp TATCACAGTTCTTCTACATTTACTTGCTACTGGTGTTaGCATCAGTTGAGATATTCGGTACATCTTGGGAAG +
Preference number: 6 (lower is better)
Translates to: YHSSSTFTCYWC*HQLRYSVHLGK
Trigger: CTTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTAAATGTAGAAGAACTGTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522594.1
CDS CAA 72 bp CACAAGTCAACTTCATTATCAAGTTTCAAACAGTGCTaGGAGATTGGTGTCTGTCTTTTTCCCAACAACTTG +
Preference number: 6 (lower is better)
Translates to: HKSTSLSSFKQC*EIGVCLFPNNL
Trigger: CAAGTTGTTGGGAAAAAGACAGACACCAATCTCCAAGCACTGTTTGAAACTTGATAATGAAGTTGACTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519187.5
CDS CAA 72 bp GTATCACAGTTCTTCTACATTTACTTGCTACTGGTGTaGACATCAGTTGAGATATTCGGTACATCTTGGGAA +
Preference number: 6 (lower is better)
Translates to: VSQFFYIYLLLV*TSVEIFGTSWE
Trigger: TTCCCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTAAATGTAGAAGAACTGTGATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522594.1
CDS CCA 72 bp AACTTCATTATCAAGTTTCAAACAGTGCTTGGAGATTaGTGTCTGTCTTTTTCCCAACAACTTGAACCATTG +
Preference number: 6 (lower is better)
Translates to: NFIIKFQTVLGD*CLSFSQQLEPL
Trigger: CAATGGTTCAAGTTGTTGGGAAAAAGACAGACACCAATCTCCAAGCACTGTTTGAAACTTGATAATGAAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519187.5
CDS CAA 90 bp AATCGTTCAAAAGATAATTGCGTATCACAGTTCTTCTACATTTACTaGCTACTGGTGTTGACATCAGTTGAGATATTCGGTACATCTTGG +
Preference number: 6 (lower is better)
Translates to: NRSKDNCVSQFFYIY*LLVLTSVEIFGTSW
Trigger: CCAAGATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTAAATGTAGAAGAACTGTGATACGCAATTATCTTTTGAACGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522594.1
CDS TCA 72 bp ATTGGTGTCTGTCTTTTTCCCAACAACTTGAACCATTaGCAGGTAGTCACAGAGAGTGATTTTAATAGTTTT +
Preference number: 6 (lower is better)
Translates to: IGVCLFPNNLNH*QVVTESDFNSF
Trigger: AAAACTATTAAAATCACTCTCTGTGACTACCTGTCAATGGTTCAAGTTGTTGGGAAAAAGACAGACACCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519187.5
CDS CAA 72 bp AAAGATAATTGCGTATCACAGTTCTTCTACATTTACTaGCTACTGGTGTTGACATCAGTTGAGATATTCGGT +
Preference number: 6 (lower is better)
Translates to: KDNCVSQFFYIY*LLVLTSVEIFG
Trigger: ACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTAAATGTAGAAGAACTGTGATACGCAATTATCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522594.1