Pregenerated sensors for TMEM54 (Homo sapiens)
Ensembl gene IDs: ENSG00000121900Ensembl transcript IDs: ENST00000329151.5, ENST00000373463.8, ENST00000463914.1, ENST00000474144.5, ENST00000475208.5, ENST00000482771.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGGTCCATTGAGCCCTCTCAGGCCAGCTCCAGGAATCCTGGCCTaGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGG | + |
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Preference number: 1 (lower is better) Translates to: EGPLSPLRPAPGILA*SQSRVACRVLVAIG Trigger: CCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGATTCCTGGAGCTGGCCTGAGAGGGCTCAATGGACCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTCCAGGAGTCACAGAGCAGAGTTaGTTGCAGGGTCCTAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SPTWVPEGPLSPLRPAPGVTEQS*LQGPSG Trigger: GCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGAC...TCCTGGAGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| 3UTR GCA 72 bp | CCAGGAATCCTGGCCTGGTCACAGAGCAGAGTTGCTTaGAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: PGILAWSQSRVA*RVLVAIGPGQD Trigger: GTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGATTCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| 3UTR GCA 72 bp | AGCTCCAGGAATCCTGGCCTGGTCACAGAGCAGAGTTaGTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: SSRNPGLVTEQS*LQGPSGHRAWA Trigger: TGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGATTCCTGGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTACAGAGCAGAGTTGCTaGCAGGGTCCTAGTGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: VESPTWVPEGPLSPLRPATEQSC*QGPSGH Trigger: ATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGT...AGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGATGTCGGCTCCGCGCTaGTCCCGCCCCCGGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: AWSQSRVACRVLVAIGPGMSAPR*SRPRLQ Trigger: CTGAAGCCGGGGGCGGGACCAGCGCGGAGCCGACAT...CCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | TCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACATGTCGGCTCCGCGCTaGTCCCGCCCCCGGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SQSRVACRVLVAIGPGQDMSAPR*SRPRLQ Trigger: CTGAAGCCGGGGGCGGGACCAGCGCGGAGCCGACAT...GTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | AGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTCCAGGACCGCATCTTGAGGGGTaGCCACGTAGCGCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: SPTWVPEGPLSPLRPAPGPHLEG*PRSAAL Trigger: CAGTGCTGCGCTACGTGGGCACCCCTCAAGATGCGG...TCCTGGAGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| 3UTR CAA 72 bp | AGGGTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATaGAGCCCTCTCAGGCCAGCTCCAGGAATCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RVESPTWVPEGP*SPLRPAPGILA Trigger: GGCCAGGATTCCTGGAGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR TCA 90 bp | CTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTCCAGCAGCTGGTGGGTaGGCTGAGCACAGCGTACAG | + |
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Preference number: 4 (lower is better) Translates to: LAWSQSRVACRVLVAIGPPAAGG*AEHSVQ Trigger: CTGTACGCTGTGCTCAGCTCACCCACCAGCTGCTGG...AGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | CTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTAGAGCACTAGGGCGATaGCCCAGAGGCACAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LAWSQSRVACRVLVAIGPRALGR*PRGTGW Trigger: CCAGCCTGTGCCTCTGGGGCATCGCCCTAGTGCTCT...AGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | TCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACAGAGCACTAGGGCGATaGCCCAGAGGCACAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SQSRVACRVLVAIGPGQDRALGR*PRGTGW Trigger: CCAGCCTGTGCCTCTGGGGCATCGCCCTAGTGCTCT...GTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | GTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTGAGGCTCAGAGCTGGTaGAGCTCAGCAGGTCACGGC | + |
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Preference number: 4 (lower is better) Translates to: VESPTWVPEGPLSPLRPAEAQSW*SSAGHG Trigger: GCCGTGACCTGCTGAGCTGCACCAGCTCTGAGCCTC...AGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | AGGGTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGAGGCTCAGAGCTGGTaGAGCTCAGCAGGTCACGGC | + |
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Preference number: 4 (lower is better) Translates to: RVESPTWVPEGPLSPLRPEAQSW*SSAGHG Trigger: GCCGTGACCTGCTGAGCTGCACCAGCTCTGAGCCTC...TGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | AGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTCCAGGACAGCTCCAGGAATCCTaGCCTGGTCACAGAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPTWVPEGPLSPLRPAPGQLQES*PGHRAE Trigger: CTCTGCTCTGTGACCAGGCCAGGATTCCTGGAGCTG...TCCTGGAGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | AGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTCCAGGACTCATTTCAGTGCAGTaGGCTGGGTGGTGGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPTWVPEGPLSPLRPAPGLISVQ*AGWWGR Trigger: TCTCCCCCACCACCCAGCCCACTGCACTGAAATGAG...TCCTGGAGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | CCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTCCAGGAATCCTGGCCTGGTCAAGCAGTGCCTTGCCCTaGGTGGCAAAGGTCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PEGPLSPLRPAPGILAWSSSALP*VAKVMA Trigger: CGCCATGACCTTTGCCACCCAGGGCAAGGCACTGCT...TGACCAGGCCAGGATTCCTGGAGCTGGCCTGAGAGGGCTCAATGGACCCTCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373463.8 |
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| CDS-3UTR TCA 90 bp | AATCCTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGTCCCCGAGGGTCCATTaGGCCCTCTCAGGCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: NPGLVTEQSCLQGPSGHRSPRVH*ALSGQL Trigger: GAGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGA...CCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | GTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTCGTAGCGCAGCACTGTaGCATGGAACAGGGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VESPTWVPEGPLSPLRPARSAAL*HGTGQL Trigger: CAGCTGCCCTGTTCCATGGCACAGTGCTGCGCTACG...AGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACATCATCCGCATCTTGAGGGGTaGCCACGTAGCGCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: EQSCLQGPSGHRAWAGHHPHLEG*PRSAAL Trigger: CAGTGCTGCGCTACGTGGGCACCCCTCAAGATGCGG...ATGATGTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | TCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACGCATCATGTGGTGGCTaGTTTTCCCCCACCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SQSRVACRVLVAIGPGQDASCGG*FSPTRA Trigger: GGCCCTGGTGGGGGAAAAGCAGCCACCACATGATGC...GTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACATCATGCAGGCAGCCAGCAGTaGCTTGCCCTGGGTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: EQSCLQGPSGHRAWAGHHAGSQQ*LALGGK Trigger: TTTGCCACCCAGGGCAAGGCACTGCTGGCTGCCTGC...ATGATGTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGTCCCGCATCATGTGGTaGCTGCTTTTCCCCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: AWSQSRVACRVLVAIGPGSRIMW*LLFPHQ Trigger: CTGGTGGGGGAAAAGCAGCCACCACATGATGCGGGA...CCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGAGTGGCCATCGGGCCTaGGCAGGACATCATCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: AWSQSRVACRVLVAIGPGSGHRA*AGHHLS Trigger: TGAGAGATGATGTCCTGCCCAGGCCCGATGGCCACT...CCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | CCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTCCAGGAATCCTGGCCTGGTCAGTTGAAAGCCCCACTTaGGTCCCCGAGGGTCCATTG | + |
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Preference number: 4 (lower is better) Translates to: PEGPLSPLRPAPGILAWSVESPT*VPEGPL Trigger: CAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAAC...TGACCAGGCCAGGATTCCTGGAGCTGGCCTGAGAGGGCTCAATGGACCCTCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGGTTGAAAGCCCCACTTaGGTCCCCGAGGGTCCATTG | + |
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Preference number: 4 (lower is better) Translates to: AWSQSRVACRVLVAIGPGVESPT*VPEGPL Trigger: CAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAAC...CCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR TCA 90 bp | GTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTAGCTGGTGGGTGAGCTaGGCACAGCGTACAGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: VESPTWVPEGPLSPLRPASWWVS*AQRTAN Trigger: GTTTGCTGTACGCTGTGCTCAGCTCACCCACCAGCT...AGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR TCA 90 bp | AATCCTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGCCAGCAGCTGGTGGGTaGGCTGAGCACAGCGTACAG | + |
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Preference number: 4 (lower is better) Translates to: NPGLVTEQSCLQGPSGHRPAAGG*AEHSVQ Trigger: CTGTACGCTGTGCTCAGCTCACCCACCAGCTGCTGG...CCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR TCA 90 bp | AGGGTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTAGGGAGGTAGCGTaGCAACACGATGGCTGCGAT | + |
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Preference number: 4 (lower is better) Translates to: RVESPTWVPEGPLSPLRPAREVA*QHDGCD Trigger: ATCGCAGCCATCGTGTTGTCACGCTACCTCCCTAGC...TGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | ATCCTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCGTAGCGCAGCACTGTaGCATGGAACAGGGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ILAWSQSRVACRVLVAIGRSAAL*HGTGQL Trigger: CAGCTGCCCTGTTCCATGGCACAGTGCTGCGCTACG...CCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCCCAGAGGCACAGGCTaGAGCTATAAATGCGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: AWSQSRVACRVLVAIGPGPRGTG*SYKCVW Trigger: CCACACGCATTTATAGCTCCAGCCTGTGCCTCTGGG...CCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | AGGGTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCATCAGAGGCTCAGAGCTaGTGCAGCTCAGCAGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: RVESPTWVPEGPLSPLRPSEAQS*CSSAGH Trigger: GTGACCTGCTGAGCTGCACCAGCTCTGAGCCTCTGA...TGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | GTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTAGTGGCCATCGGGCCTaGGCAGGACATCATCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: VESPTWVPEGPLSPLRPASGHRA*AGHHLS Trigger: TGAGAGATGATGTCCTGCCCAGGCCCGATGGCCACT...AGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | CTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTCTCATTTCAGTGCAGTaGGCTGGGTGGTGGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LAWSQSRVACRVLVAIGPLISVQ*AGWWGR Trigger: TCTCCCCCACCACCCAGCCCACTGCACTGAAATGAG...AGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACATCATGTGCCTTGCCCTGGGTaGCAAAGGTCATGGCGATGG | + |
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Preference number: 4 (lower is better) Translates to: EQSCLQGPSGHRAWAGHHVPCPG*QRSWRW Trigger: CCATCGCCATGACCTTTGCCACCCAGGGCAAGGCAC...ATGATGTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373463.8 |
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| CDS-3UTR TCA 90 bp | ATCCTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGAGCTGGTGGGTGAGCTaGGCACAGCGTACAGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: ILAWSQSRVACRVLVAIGSWWVS*AQRTAN Trigger: GTTTGCTGTACGCTGTGCTCAGCTCACCCACCAGCT...CCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACATCATGATGGCTGCGATGCCTaGAGTGATGACCACGATGGC | + |
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Preference number: 4 (lower is better) Translates to: EQSCLQGPSGHRAWAGHHDGCDA*SDDHDG Trigger: GCCATCGTGGTCATCACTTCAGGCATCGCAGCCATC...ATGATGTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGAAAGTCTCATTTCAGTaGAGTGGGCTGGGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AWSQSRVACRVLVAIGPGKVSFQ*SGLGGG Trigger: CCCACCACCCAGCCCACTGCACTGAAATGAGACTTT...CCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACATCATTCCCGCATCATGTGGTaGCTGCTTTTCCCCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: EQSCLQGPSGHRAWAGHHSRIMW*LLFPHQ Trigger: CTGGTGGGGGAAAAGCAGCCACCACATGATGCGGGA...ATGATGTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | GTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTTTCTCCCGCATCATGTaGTGGCTGCTTTTCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VESPTWVPEGPLSPLRPAFSRIM*WLLFPH Trigger: GTGGGGGAAAAGCAGCCACCACATGATGCGGGAGAA...AGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | TCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACTTCTCCCGCATCATGTaGTGGCTGCTTTTCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SQSRVACRVLVAIGPGQDFSRIM*WLLFPH Trigger: GTGGGGGAAAAGCAGCCACCACATGATGCGGGAGAA...GTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACATCATGTCACAGAGCAGAGTTaGTTGCAGGGTCCTAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EQSCLQGPSGHRAWAGHHVTEQS*LQGPSG Trigger: GCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGAC...ATGATGTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | ATCCTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGGTCACAGAGCAGAGTTaGTTGCAGGGTCCTAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: ILAWSQSRVACRVLVAIGVTEQS*LQGPSG Trigger: GCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGAC...CCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGAGCTATAAATGCGTGTaGGGTCGAAGGGACAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: AWSQSRVACRVLVAIGPGSYKCV*GRRDSQ Trigger: CTGACTGTCCCTTCGACCCCACACGCATTTATAGCT...CCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | AATCCTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGTCAGAGGCTCAGAGCTaGTGCAGCTCAGCAGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: NPGLVTEQSCLQGPSGHRSEAQS*CSSAGH Trigger: GTGACCTGCTGAGCTGCACCAGCTCTGAGCCTCTGA...CCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | AATCCTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGGCTGGAGCTATAAATaGGTGTGGGGTCGAAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: NPGLVTEQSCLQGPSGHRGWSYK*VWGRRD Trigger: GTCCCTTCGACCCCACACGCATTTATAGCTCCAGCC...CCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CCA 90 bp | GTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTAGCTATAAATGCGTGTaGGGTCGAAGGGACAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VESPTWVPEGPLSPLRPASYKCV*GRRDSQ Trigger: CTGACTGTCCCTTCGACCCCACACGCATTTATAGCT...AGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR GCA 90 bp | AATCCTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGAAAGTCTCATTTCAGTaGAGTGGGCTGGGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NPGLVTEQSCLQGPSGHRKVSFQ*SGLGGG Trigger: CCCACCACCCAGCCCACTGCACTGAAATGAGACTTT...CCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CAA 90 bp | GCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGGCAGCCAGCAGTGCCTaGCCCACGATGGCGGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: AWSQSRVACRVLVAIGPGAASSA*PTMAEV Trigger: CACTTCCGCCATCGTGGGCAAGGCACTGCTGGCTGC...CCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329151.5 |
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| CDS-3UTR CAA 90 bp | TCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACCAGAGCCACCGCATCTaGAGGGGTGCCCACGTAGCG | + |
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Preference number: 5 (lower is better) Translates to: SQSRVACRVLVAIGPGQDQSHRI*RGAHVA Trigger: CGCTACGTGGGCACCCCTCAAGATGCGGTGGCTCTG...GTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CAA 90 bp | GTTGAAAGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTGCAGCCAGCAGTGCCTaGCCCTGGGTGGCAAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: VESPTWVPEGPLSPLRPAAASSA*PWVAKV Trigger: GACCTTTGCCACCCAGGGCAAGGCACTGCTGGCTGC...AGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCTTTCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373463.8 |
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| CDS TCA 90 bp | GGCTGCTTTTCCCCCACCAGGGCCTCAGCTCCAGCAGCTGGTGGGTaGGCTGAGCACAGCGTACAGCAAACACGTTCTCCGCCACGCAGA | + |
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Preference number: 5 (lower is better) Translates to: GCFSPTRASAPAAGG*AEHSVQQTRSPPRR Trigger: TCTGCGTGGCGGAGAACGTGTTTGCTGTACGCTGTGCTCAGCTCACCCACCAGCTGCTGGAGCTGAGGCCCTGGTGGGGGAAAAGCAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000329151.5 ENST00000373463.8 ENST00000463914.1 ENST00000474144.5 ENST00000475208.5 ENST00000482771.1 |
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| CDS CCA 90 bp | AGGCAGCCAGCAGTGCCTTGCCCTGGGTGGCAAAGGTCATGGCGATaGAGGCCAAGAGGCCGAGGGCACAGGTCAGAGAAAGGAGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: RQPAVPCPGWQRSWR*RPRGRGHRSEKGEH Trigger: GTGCTCTCCTTTCTCTGACCTGTGCCCTCGGCCTCTTGGCCTCCATCGCCATGACCTTTGCCACCCAGGGCAAGGCACTGCTGGCTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373463.8 ENST00000463914.1 ENST00000475208.5 |
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| CDS CCA 90 bp | AAGTGCAGGCAGCCAGCAGTGCCTTGCCCTGGGTGGCAAAGGTCATaGCGATGGAGGCCAAGAGGCCGAGGGCACAGGTCAGAGAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: KCRQPAVPCPGWQRS*RWRPRGRGHRSEKG Trigger: TCCTTTCTCTGACCTGTGCCCTCGGCCTCTTGGCCTCCATCGCCATGACCTTTGCCACCCAGGGCAAGGCACTGCTGGCTGCCTGCACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000373463.8 ENST00000463914.1 ENST00000475208.5 |
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| CDS CCA 90 bp | AGTTCAGAGCTCCCAAAAGTGCAGGCAGCCAGCAGTGCCTTGCCCTaGGTGGCAAAGGTCATGGCGATGGAGGCCAAGAGGCCGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SSELPKVQAASSALP*VAKVMAMEAKRPRA Trigger: TGCCCTCGGCCTCTTGGCCTCCATCGCCATGACCTTTGCCACCCAGGGCAAGGCACTGCTGGCTGCCTGCACTTTTGGGAGCTCTGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373463.8 ENST00000463914.1 ENST00000475208.5 |
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| CDS-3UTR CAA 90 bp | AATCCTGGCCTGGTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGCAGAGCCACCGCATCTaGAGGGGTGCCCACGTAGCG | + |
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Preference number: 5 (lower is better) Translates to: NPGLVTEQSCLQGPSGHRQSHRI*RGAHVA Trigger: CGCTACGTGGGCACCCCTCAAGATGCGGTGGCTCTG...CCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGACCAGGCCAGGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS-3UTR CAA 90 bp | AGCCCCACTTGGGTCCCCGAGGGTCCATTGAGCCCTCTCAGGCCAGCTCCAGGAACAGAGCAGAGTTGCTaGCAGGGTCCTAGTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SPTWVPEGPLSPLRPAPGTEQSC*QGPSGH Trigger: ATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGT...TCCTGGAGCTGGCCTGAGAGGGCTCAATGGACCCTCGGGGACCCAAGTGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS GCA 90 bp | AGGGACAGTCAGGTGCGAGGGCCAGTAGTTCAGAGCTCCCAAAAGTaGAGGCAGCCAGCAGTGCCTTGCCCTGGGTGGCAAAGGTCATGG | + |
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Preference number: 5 (lower is better) Translates to: RDSQVRGPVVQSSQK*RQPAVPCPGWQRSW Trigger: CCATGACCTTTGCCACCCAGGGCAAGGCACTGCTGGCTGCCTGCACTTTTGGGAGCTCTGAACTACTGGCCCTCGCACCTGACTGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373463.8 ENST00000463914.1 ENST00000475208.5 |
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| CDS GCA 90 bp | AGCGTACAGCAAACACGTTCTCCGCCACGCAGAGCACTAGGGCGATaGCCCAGAGGCACAGGCTGGAGCTATAAATGCGTGTGGGGTCGA | + |
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Preference number: 5 (lower is better) Translates to: SVQQTRSPPRRALGR*PRGTGWSYKCVWGR Trigger: TCGACCCCACACGCATTTATAGCTCCAGCCTGTGCCTCTGGGGCATCGCCCTAGTGCTCTGCGTGGCGGAGAACGTGTTTGCTGTACGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000329151.5 ENST00000373463.8 ENST00000463914.1 ENST00000474144.5 ENST00000475208.5 |
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| CDS CCA 90 bp | GTCACAGAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTaGGCAGGACATCATCTCTCAGAGGGTCAGAGGCTCAGAGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: VTEQSCLQGPSGHRA*AGHHLSEGQRLRAG Trigger: ACCAGCTCTGAGCCTCTGACCCTCTGAGAGATGATGTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329151.5 ENST00000373463.8 ENST00000474144.5 ENST00000482771.1 |
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| CDS-3UTR CAA 90 bp | GAGCAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTGGGCAGGACATCATACAGAGCAGAGTTGCTaGCAGGGTCCTAGTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: EQSCLQGPSGHRAWAGHHTEQSC*QGPSGH Trigger: ATGGCCACTAGGACCCTGCAAGCAACTCTGCTCTGT...ATGATGTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000329151.5 ENST00000373463.8 |
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| CDS TCA 90 bp | TTAGCCTGGGCCTCACATCTCCATCTGCCTCCTCATAGTCCAGCCTaGCATGATGTTTCTAAAACAGTCACTCCCTCTCTACAACCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LAWASHLHLPPHSPA*HDVSKTVTPSLQPS Trigger: GGAAGGTTGTAGAGAGGGAGTGACTGTTTTAGAAACATCATGTCAGGCTGGACTATGAGGAGGCAGATGGAGATGTGAGGCCCAGGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463914.1 |
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| CDS GCA 72 bp | CAGGTGCGAGGGCCAGTAGTTCAGAGCTCCCAAAAGTaGAGGCAGCCAGCAGTGCCTTGCCCACGATGGCGG | + |
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Preference number: 6 (lower is better) Translates to: QVRGPVVQSSQK*RQPAVPCPRWR Trigger: CCGCCATCGTGGGCAAGGCACTGCTGGCTGCCTGCACTTTTGGGAGCTCTGAACTACTGGCCCTCGCACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329151.5 |
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| CDS GCA 72 bp | CAGGTGCGAGGGCCAGTAGTTCAGAGCTCCCAAAAGTaGAGGCAGCCAGCAGTGCCTTGCCCTGGGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: QVRGPVVQSSQK*RQPAVPCPGWQ Trigger: TTGCCACCCAGGGCAAGGCACTGCTGGCTGCCTGCACTTTTGGGAGCTCTGAACTACTGGCCCTCGCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373463.8 ENST00000463914.1 ENST00000475208.5 |
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| CDS CCA 72 bp | CTCCCAAAAGTGCAGGCAGCCAGCAGTGCCTTGCCCTaGGTGGCAAAGGTCATGGCGATGGAGGCCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LPKVQAASSALP*VAKVMAMEAKR Trigger: CCTCTTGGCCTCCATCGCCATGACCTTTGCCACCCAGGGCAAGGCACTGCTGGCTGCCTGCACTTTTGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373463.8 ENST00000463914.1 ENST00000475208.5 |
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| CDS CAA 90 bp | GACAGAGAGGATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTaGAGGGGTGCCCACGTAGCGCAGCACTGTGCCATGGAACAGGGC | + |
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Preference number: 6 (lower is better) Translates to: DREDVDHAVLQSHRI*RGAHVAQHCAMEQG Trigger: GCCCTGTTCCATGGCACAGTGCTGCGCTACGTGGGCACCCCTCAAGATGCGGTGGCTCTGCAGTACTGCGTGGTCAACATCCTCTCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329151.5 ENST00000373463.8 ENST00000474144.5 ENST00000475208.5 |
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| CDS CCA 72 bp | CAGAGTTGCTTGCAGGGTCCTAGTGGCCATCGGGCCTaGGCAGGACATCATCTCTCAGAGGGTCAGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: QSCLQGPSGHRA*AGHHLSEGQRL Trigger: GAGCCTCTGACCCTCTGAGAGATGATGTCCTGCCCAGGCCCGATGGCCACTAGGACCCTGCAAGCAACTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329151.5 ENST00000373463.8 ENST00000474144.5 ENST00000482771.1 |
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| CDS CAA 72 bp | GATGTTGACCACGCAGTACTGCAGAGCCACCGCATCTaGAGGGGTGCCCACGTAGCGCAGCACTGTGCCATG | + |
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Preference number: 6 (lower is better) Translates to: DVDHAVLQSHRI*RGAHVAQHCAM Trigger: CATGGCACAGTGCTGCGCTACGTGGGCACCCCTCAAGATGCGGTGGCTCTGCAGTACTGCGTGGTCAACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329151.5 ENST00000373463.8 ENST00000474144.5 ENST00000475208.5 |
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| CDS GCA 72 bp | CAAACACGTTCTCCGCCACGCAGAGCACTAGGGCGATaGCCCAGAGGCACAGGCTGGAGCTATAAATGCGTG | + |
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Preference number: 6 (lower is better) Translates to: QTRSPPRRALGR*PRGTGWSYKCV Trigger: CACGCATTTATAGCTCCAGCCTGTGCCTCTGGGGCATCGCCCTAGTGCTCTGCGTGGCGGAGAACGTGTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000329151.5 ENST00000373463.8 ENST00000463914.1 ENST00000474144.5 ENST00000475208.5 |
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| CDS CCA 72 bp | CTCCTAAGCCTGTGTCTCAAGCAGGTTCATGTATCCTaGGGCCACCGGGGCATGCCAGGGTATGCATGGGAC | + |
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Preference number: 6 (lower is better) Translates to: LLSLCLKQVHVS*GHRGMPGYAWD Trigger: GTCCCATGCATACCCTGGCATGCCCCGGTGGCCCCAGGATACATGAACCTGCTTGAGACACAGGCTTAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463914.1 |
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| CDS TCA 72 bp | GCCTCACATCTCCATCTGCCTCCTCATAGTCCAGCCTaGCATGATGTTTCTAAAACAGTCACTCCCTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: ASHLHLPPHSPA*HDVSKTVTPSL Trigger: TAGAGAGGGAGTGACTGTTTTAGAAACATCATGTCAGGCTGGACTATGAGGAGGCAGATGGAGATGTGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463914.1 |
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