Pregenerated sensors for TMEM50A (Homo sapiens)
Ensembl gene IDs: ENSG00000183726Ensembl transcript IDs: ENST00000374358.5, ENST00000468704.1, ENST00000480937.5, ENST00000487234.1, ENST00000491936.5, ENST00000498135.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCGGAAGACCTTCCCATGGAAGGGACACAGGGAGCCTGGTGGCTaGACCATGGTGCTTCTCTCTTCCAACACGTCCACTCACCCCTTG | + |
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Preference number: 1 (lower is better) Translates to: QRKTFPWKGHREPGG*TMVLLSSNTSTHPL Trigger: CAAGGGGTGAGTGGACGTGTTGGAAGAGAGAAGCACCATGGTCCAGCCACCAGGCTCCCTGTGTCCCTTCCATGGGAAGGTCTTCCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR CCA 90 bp | AGAGGCACAGCGGAAGACCTTCCCATGGAAGGGACACAGGGAGCCTaGTGGCTGGACCATGGTGCTTCTCTCTTCCAACACGTCCACTCA | + |
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Preference number: 1 (lower is better) Translates to: RGTAEDLPMEGTQGA*WLDHGASLFQHVHS Trigger: TGAGTGGACGTGTTGGAAGAGAGAAGCACCATGGTCCAGCCACCAGGCTCCCTGTGTCCCTTCCATGGGAAGGTCTTCCGCTGTGCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR TCA 90 bp | CAGAACCACGTGTCATGGCTGAGTCACATCTTCCTGCCCTTGGAATaGGAGGCACAGCGGAAGACCTTCCCATGGAAGGGACACAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: QNHVSWLSHIFLPLE*EAQRKTFPWKGHRE Trigger: CTCCCTGTGTCCCTTCCATGGGAAGGTCTTCCGCTGTGCCTCTCATTCCAAGGGCAGGAAGATGTGACTCAGCCATGACACGTGGTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR TCA 90 bp | GGATGTGGAGTGACTGTGCATCCCACCAGAACCACGTGTCATGGCTaGGTCACATCTTCCTGCCCTTGGAATGAGAGGCACAGCGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: GCGVTVHPTRTTCHG*VTSSCPWNERHSGR Trigger: TCTTCCGCTGTGCCTCTCATTCCAAGGGCAGGAAGATGTGACTCAGCCATGACACGTGGTTCTGGTGGGATGCACAGTCACTCCACATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR TCA 90 bp | CTCCCAGCAGTTTTACAAGGTGGCTGGCATTCCCTGAGCATATTCTaGATTGCACTGTGGGGAAAGAGGTTGTGCTCAGTTGTAGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LPAVLQGGWHSLSIF*IALWGKRLCSVVGW Trigger: CCACCCTACAACTGAGCACAACCTCTTTCCCCACAGTGCAATTCAGAATATGCTCAGGGAATGCCAGCCACCTTGTAAAACTGCTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR CCA 90 bp | GCTGGACCATGGTGCTTCTCTCTTCCAACACGTCCACTCACCCCTTaGGAGACCCTCAAAAGCCAGTTACATTACATGTTCACAGAATTT | + |
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Preference number: 1 (lower is better) Translates to: AGPWCFSLPTRPLTP*ETLKSQLHYMFTEF Trigger: AAATTCTGTGAACATGTAATGTAACTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACGTGTTGGAAGAGAGAAGCACCATGGTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGGGAATCATGCTTTTCTCCCAGCAGTTTTACAAGGTGGCTGGCATTCCCTTCCTGCCCTTGGAATaGGAGGCACAGCGGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: LVGIMLFSQQFYKVAGIPFLPLE*EAQRKT Trigger: GGTCTTCCGCTGTGCCTCTCATTCCAAGGGCAGGAA...GGGAATGCCAGCCACCTTGTAAAACTGCTGGGAGAAAAGCATGATTCCCACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGCTGGCATTCCCTGAGCATATTCTGAATTGCACTGTGGGGAAAGAGGTTCGTCCACTCACCCCTTaGGAGACCCTCAAAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RWLAFPEHILNCTVGKEVRPLTP*ETLKSQ Trigger: CTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACG...AACCTCTTTCCCCACAGTGCAATTCAGAATATGCTCAGGGAATGCCAGCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGGGAATCATGCTTTTCTCCCAGCAGTTTTACAAGGTGGCTGGCATTCCCCGGAAGACCTTCCCATaGAAGGGACACAGGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LVGIMLFSQQFYKVAGIPRKTFP*KGHREP Trigger: AGGCTCCCTGTGTCCCTTCCATGGGAAGGTCTTCCG...GGGAATGCCAGCCACCTTGTAAAACTGCTGGGAGAAAAGCATGATTCCCACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGGGAATCATGCTTTTCTCCCAGCAGTTTTACAAGGTGGCTGGCATTCCCCTGGTGGCTGGACCATaGTGCTTCTCTCTTCCAACA | + |
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Preference number: 2 (lower is better) Translates to: LVGIMLFSQQFYKVAGIPLVAGP*CFSLPT Trigger: TGTTGGAAGAGAGAAGCACCATGGTCCAGCCACCAG...GGGAATGCCAGCCACCTTGTAAAACTGCTGGGAGAAAAGCATGATTCCCACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGCAATATTCACAGTGTAGAGACTGTCAGATGACCATGGCTAGCATGGAAAGGGAGCCTGGTGGCTaGACCATGGTGCTTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: TRQYSQCRDCQMTMASMEREPGG*TMVLLS Trigger: AGAGAGAAGCACCATGGTCCAGCCACCAGGCTCCCT...TTCCATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATATTGCCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGGGAATCATGCTTTTCTCCCAGCAGTTTTACAAGGTGGCTGGCATTCCCCTGTTCCCTCCTATGTaGAAAGAGAAGGTGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LVGIMLFSQQFYKVAGIPLFPPM*KEKVGF Trigger: GAAGCCCACCTTCTCTTTTCACATAGGAGGGAACAG...GGGAATGCCAGCCACCTTGTAAAACTGCTGGGAGAAAAGCATGATTCCCACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGGGAATCATGCTTTTCTCCCAGCAGTTTTACAAGGTGGCTGGCATTCCCCAGAACCACGTGTCATaGCTGAGTCACATCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LVGIMLFSQQFYKVAGIPQNHVS*LSHIFL Trigger: CAGGAAGATGTGACTCAGCCATGACACGTGGTTCTG...GGGAATGCCAGCCACCTTGTAAAACTGCTGGGAGAAAAGCATGATTCCCACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGCTGGCATTCCCTGAGCATATTCTGAATTGCACTGTGGGGAAAGAGGTTGTAGAGACTGTCAGATaGCCATGGCTAGCATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: RWLAFPEHILNCTVGKEVVETVR*PWLAWK Trigger: TTTCCATGCTAGCCATGGTCATCTGACAGTCTCTAC...AACCTCTTTCCCCACAGTGCAATTCAGAATATGCTCAGGGAATGCCAGCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR GCA 90 bp | CTTGTGGGAATCATGCTTTTCTCCCAGCAGTTTTACAAGGTGGCTGGCATTCCCAAACAAACAAACCCATaGAGGGCTGTTGTGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LVGIMLFSQQFYKVAGIPKQTNP*RAVVLW Trigger: CCACAGCACAACAGCCCTGCATGGGTTTGTTTGTTT...GGGAATGCCAGCCACCTTGTAAAACTGCTGGGAGAAAAGCATGATTCCCACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGCAATATTCACAGTGTAGAGACTGTCAGATGACCATGGCTAGCATGGAACCTTTCCTTCAATGGTaGATGTGGAGTGACTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: TRQYSQCRDCQMTMASMEPFLQW*MWSDCA Trigger: TGCACAGTCACTCCACATCCACCATTGAAGGAAAGG...TTCCATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATATTGCCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR GCA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAGTGGCTGGACCATGGTaGTTCTCTCTTCCAACACGT | + |
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Preference number: 2 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRVAGPW*FSLPTR Trigger: ACGTGTTGGAAGAGAGAAGCACCATGGTCCAGCCAC...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR CCA 90 bp | TATCAGAACAACTACAAAGAAATTGTCCCCTGTCTAAGACTGGAGTGTCAAGTCCTTCAATGGTGGATGTaGAGTGACTGTGCATCCCAC | + |
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Preference number: 2 (lower is better) Translates to: YQNNYKEIVPCLRLECQVLQWWM*SDCASH Trigger: GTGGGATGCACAGTCACTCCACATCCACCATTGAAG...GACTTGACACTCCAGTCTTAGACAGGGGACAATTTCTTTGTAGTTGTTCTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAACAACTAACCACGTGTCATGGCTaGGTCACATCTTCCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: FSTQMKCNMEPSLLSEQLTTCHG*VTSSCP Trigger: AGGGCAGGAAGATGTGACTCAGCCATGACACGTGGT...TAGTTGTTCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR TCA 72 bp | GTGTCATGGCTGAGTCACATCTTCCTGCCCTTGGAATaGGAGGCACAGCGGAAGACCTTCCCATGGAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: VSWLSHIFLPLE*EAQRKTFPWKG Trigger: TCCCTTCCATGGGAAGGTCTTCCGCTGTGCCTCTCATTCCAAGGGCAGGAAGATGTGACTCAGCCATGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR TCA 72 bp | GTGACTGTGCATCCCACCAGAACCACGTGTCATGGCTaGGTCACATCTTCCTGCCCTTGGAATGAGAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: VTVHPTRTTCHG*VTSSCPWNERH Trigger: GTGCCTCTCATTCCAAGGGCAGGAAGATGTGACTCAGCCATGACACGTGGTTCTGGTGGGATGCACAGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR CCA 72 bp | TGGTGCTTCTCTCTTCCAACACGTCCACTCACCCCTTaGGAGACCCTCAAAAGCCAGTTACATTACATGTTC | + |
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Preference number: 3 (lower is better) Translates to: WCFSLPTRPLTP*ETLKSQLHYMF Trigger: GAACATGTAATGTAACTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACGTGTTGGAAGAGAGAAGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR CCA 72 bp | TGGGAATCATGCTTTTCTCCCAGCAGTTTTACAAGGTaGCTGGCATTCCCTGAGCATATTCTGAATTGCACT | + |
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Preference number: 3 (lower is better) Translates to: WESCFSPSSFTR*LAFPEHILNCT Trigger: AGTGCAATTCAGAATATGCTCAGGGAATGCCAGCCACCTTGTAAAACTGCTGGGAGAAAAGCATGATTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR CAA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAACCCATGCAGGGCTGTaGTGCTGTGGGAAATCAGAT | + |
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Preference number: 3 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRTHAGL*CCGKSD Trigger: ATCTGATTTCCCACAGCACAACAGCCCTGCATGGGT...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR-3UTR CAA 90 bp | ACCAGGCAATATTCACAGTGTAGAGACTGTCAGATGACCATGGCTAGCATGGAATTCAGAGCACTTTCATaGTGGTTTTGGACCTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: TRQYSQCRDCQMTMASMEFRALS*WFWTSD Trigger: ATCTGAGGTCCAAAACCACAATGAAAGTGCTCTGAA...TTCCATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATATTGCCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| 3UTR TCA 72 bp | CAAGAGTTCCCAGTAGCTAATGTTTGTCATTCTAGTTaGCCGTGCTGGTCTATTAGGCTAGTGGTTCAGTAC | + |
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Preference number: 3 (lower is better) Translates to: QEFPVANVCHSS*PCWSIRLVVQY Trigger: GTACTGAACCACTAGCCTAATAGACCAGCACGGTCAACTAGAATGACAAACATTAGCTACTGGGAACTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | AGGTGGCTGGCATTCCCTGAGCATATTCTGAATTGCACTGTGGGGAAAGAGGTTAGCCCCGTCGTGCAGTaGTTCCGGAGCCCGGTGTCG | + |
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Preference number: 4 (lower is better) Translates to: RWLAFPEHILNCTVGKEVSPVVQ*FRSPVS Trigger: CGACACCGGGCTCCGGAACCACTGCACGACGGGGCT...AACCTCTTTCCCCACAGTGCAATTCAGAATATGCTCAGGGAATGCCAGCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | GAGTCACATCTTCCTGCCCTTGGAATGAGAGGCACAGCGGAAGACCTTCCCATGCGGAAGACCTTCCCATaGAAGGGACACAGGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: ESHLPALGMRGTAEDLPMRKTFP*KGHREP Trigger: AGGCTCCCTGTGTCCCTTCCATGGGAAGGTCTTCCG...CATGGGAAGGTCTTCCGCTGTGCCTCTCATTCCAAGGGCAGGAAGATGTGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR GCA 90 bp | GCTTCTCTCTTCCAACACGTCCACTCACCCCTTGGGAGACCCTCAAAAGCCAGTTGGGGAAAGAGGTTGTaGTCAGTTGTAGGGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: ASLFQHVHSPLGRPSKASWGKRL*SVVGWG Trigger: CCCCCACCCTACAACTGAGCACAACCTCTTTCCCCA...ACTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACGTGTTGGAAGAGAGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | TTCTCTCTTCCAACACGTCCACTCACCCCTTGGGAGACCCTCAAAAGCCAGTTATTCCTGCCCTTGGAATaGGAGGCACAGCGGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: FSLPTRPLTPWETLKSQLFLPLE*EAQRKT Trigger: GGTCTTCCGCTGTGCCTCTCATTCCAAGGGCAGGAA...TAACTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACGTGTTGGAAGAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTTCCAACACGTCCACTCACCCCTTGGGAGACCCTCAAAAGCCAGTTAAGGGAGCCTGGTGGCTaGACCATGGTGCTTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: FSLPTRPLTPWETLKSQLREPGG*TMVLLS Trigger: AGAGAGAAGCACCATGGTCCAGCCACCAGGCTCCCT...TAACTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACGTGTTGGAAGAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | GCTTCTCTCTTCCAACACGTCCACTCACCCCTTGGGAGACCCTCAAAAGCCAGTCTGTTCCCTCCTATGTaGAAAGAGAAGGTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ASLFQHVHSPLGRPSKASLFPPM*KEKVGF Trigger: GAAGCCCACCTTCTCTTTTCACATAGGAGGGAACAG...ACTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACGTGTTGGAAGAGAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR GCA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAAGTCCAGCCCCGTCGTaGAGTGGTTCCGGAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRSPAPS*SGSGAR Trigger: CCGGGCTCCGGAACCACTGCACGACGGGGCTGGACT...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | ACCAGGCAATATTCACAGTGTAGAGACTGTCAGATGACCATGGCTAGCATGGAACGTCCACTCACCCCTTaGGAGACCCTCAAAAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: TRQYSQCRDCQMTMASMERPLTP*ETLKSQ Trigger: CTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACG...TTCCATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATATTGCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | ACCAGGCAATATTCACAGTGTAGAGACTGTCAGATGACCATGGCTAGCATGGAAACACAGGGAGCCTGGTaGCTGGACCATGGTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TRQYSQCRDCQMTMASMETQGAW*LDHGAS Trigger: AGAAGCACCATGGTCCAGCCACCAGGCTCCCTGTGT...TTCCATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATATTGCCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTTCCAACACGTCCACTCACCCCTTGGGAGACCCTCAAAAGCCAGTTACTTCAATGGTGGATGTaGAGTGACTGTGCATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FSLPTRPLTPWETLKSQLLQWWM*SDCASH Trigger: GTGGGATGCACAGTCACTCCACATCCACCATTGAAG...TAACTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACGTGTTGGAAGAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | ACCAGGCAATATTCACAGTGTAGAGACTGTCAGATGACCATGGCTAGCATGGAATGCTCAGTTGTAGGGTaGGGGGATGCACTGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: TRQYSQCRDCQMTMASMECSVVG*GDALPE Trigger: CTCAGGCAGTGCATCCCCCCACCCTACAACTGAGCA...TTCCATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATATTGCCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | TTCTCTCTTCCAACACGTCCACTCACCCCTTGGGAGACCCTCAAAAGCCAGTTAGTAGAGACTGTCAGATaGCCATGGCTAGCATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: FSLPTRPLTPWETLKSQLVETVR*PWLAWK Trigger: TTTCCATGCTAGCCATGGTCATCTGACAGTCTCTAC...TAACTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACGTGTTGGAAGAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR GCA 90 bp | ACCAGGCAATATTCACAGTGTAGAGACTGTCAGATGACCATGGCTAGCATGGAAGTGGCTGGACCATGGTaGTTCTCTCTTCCAACACGT | + |
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Preference number: 4 (lower is better) Translates to: TRQYSQCRDCQMTMASMEVAGPW*FSLPTR Trigger: ACGTGTTGGAAGAGAGAAGCACCATGGTCCAGCCAC...TTCCATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATATTGCCTGGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | CTTGTGGGAATCATGCTTTTCTCCCAGCAGTTTTACAAGGTGGCTGGCATTCCCGGAGTTCATGTGGGATaGCAGCAAGTCATTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LVGIMLFSQQFYKVAGIPGVHVG*QQVISL Trigger: CAAAGAAATGACTTGCTGTCATCCCACATGAACTCC...GGGAATGCCAGCCACCTTGTAAAACTGCTGGGAGAAAAGCATGATTCCCACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | ACCAGGCAATATTCACAGTGTAGAGACTGTCAGATGACCATGGCTAGCATGGAAGTGGCTGGCATTCCCTaGGCATATTCTGAATTGCAC | + |
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Preference number: 4 (lower is better) Translates to: TRQYSQCRDCQMTMASMEVAGIP*AYSELH Trigger: GTGCAATTCAGAATATGCTCAGGGAATGCCAGCCAC...TTCCATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATATTGCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR GCA 90 bp | TTCTCTCTTCCAACACGTCCACTCACCCCTTGGGAGACCCTCAAAAGCCAGTTAGAGCATATTCTGAATTaGACTGTGGGGAAAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: FSLPTRPLTPWETLKSQLEHILN*TVGKEV Trigger: AACCTCTTTCCCCACAGTGCAATTCAGAATATGCTC...TAACTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACGTGTTGGAAGAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | AGGTGGCTGGCATTCCCTGAGCATATTCTGAATTGCACTGTGGGGAAAGAGGTTGTTTTACAAGGTGGCTaGCATTCCCTGAGCATATTC | + |
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Preference number: 4 (lower is better) Translates to: RWLAFPEHILNCTVGKEVVLQGG*HSLSIF Trigger: GAATATGCTCAGGGAATGCCAGCCACCTTGTAAAAC...AACCTCTTTCCCCACAGTGCAATTCAGAATATGCTCAGGGAATGCCAGCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR GCA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAGAGTGTATCCCATCTTaGAGAGGTGGGGAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRECIPS*RGGEPG Trigger: CCCAGGCTCCCCACCTCTGCAAGATGGGATACACTC...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR GCA 90 bp | CTTGTGGGAATCATGCTTTTCTCCCAGCAGTTTTACAAGGTGGCTGGCATTCCCTCCTTGTGGGAATCATaGTTTTCTCCCAGCAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LVGIMLFSQQFYKVAGIPSLWES*FSPSSF Trigger: AAAACTGCTGGGAGAAAAGCATGATTCCCACAAGGA...GGGAATGCCAGCCACCTTGTAAAACTGCTGGGAGAAAAGCATGATTCCCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTTCCAACACGTCCACTCACCCCTTGGGAGACCCTCAAAAGCCAGTTAATAACACCACAGGCATaGTATGAGTGGTTGAAATCT | + |
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Preference number: 4 (lower is better) Translates to: FSLPTRPLTPWETLKSQLITPQA*YEWLKS Trigger: AGATTTCAACCACTCATACCATGCCTGTGGTGTTAT...TAACTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACGTGTTGGAAGAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | TATCAGAACAACTACAAAGAAATTGTCCCCTGTCTAAGACTGGAGTGTCAAGTCATGCGAGCACCTGTTTaGCCCAGACAACCTTCACTG | + |
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Preference number: 4 (lower is better) Translates to: YQNNYKEIVPCLRLECQVMRAPV*PRQPSL Trigger: CAGTGAAGGTTGTCTGGGTCAAACAGGTGCTCGCAT...GACTTGACACTCCAGTCTTAGACAGGGGACAATTTCTTTGTAGTTGTTCTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAACCACGTGTCATGGCTaGGTCACATCTTCCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRTTCHG*VTSSCP Trigger: AGGGCAGGAAGATGTGACTCAGCCATGACACGTGGT...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | ACCAGGCAATATTCACAGTGTAGAGACTGTCAGATGACCATGGCTAGCATGGAAGTTTGTCATTCTAGTTaGCCGTGCTGGTCTATTAGG | + |
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Preference number: 4 (lower is better) Translates to: TRQYSQCRDCQMTMASMEVCHSS*PCWSIR Trigger: CCTAATAGACCAGCACGGTCAACTAGAATGACAAAC...TTCCATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATATTGCCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAATGGTGGATGTGGAGTaGCTGTGCATCCCACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRMVDVE*LCIPPE Trigger: TTCTGGTGGGATGCACAGTCACTCCACATCCACCAT...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR GCA 90 bp | AGGTGGCTGGCATTCCCTGAGCATATTCTGAATTGCACTGTGGGGAAAGAGGTTGGGATAAATAACAGCTaGATCTATGATAATCCACCA | + |
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Preference number: 4 (lower is better) Translates to: RWLAFPEHILNCTVGKEVGINNS*IYDNPP Trigger: TGGTGGATTATCATAGATGCAGCTGTTATTTATCCC...AACCTCTTTCCCCACAGTGCAATTCAGAATATGCTCAGGGAATGCCAGCCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGACTGGTGGCTGGACCATaGTGCTTCTCTCTTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRLVAGP*CFSLPT Trigger: TGTTGGAAGAGAGAAGCACCATGGTCCAGCCACCAG...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR GCA 90 bp | ACCAGGCAATATTCACAGTGTAGAGACTGTCAGATGACCATGGCTAGCATGGAAAAGAATCCACATAGATaGAATCAGAGATCCAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: TRQYSQCRDCQMTMASMEKNPHR*NQRSKG Trigger: GCCTTTGGATCTCTGATTGCATCTATGTGGATTCTT...TTCCATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATATTGCCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGATCCCTGAGCATATTCTaGATTGCACTGTGGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRSLSIF*IALWGK Trigger: CTTTCCCCACAGTGCAATTCAGAATATGCTCAGGGA...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR GCA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGACAACGAAAAGCCAAATaGGAGCACCTGTTTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRQRKAK*EHLFDP Trigger: TGGGTCAAACAGGTGCTCGCATTTGGCTTTTCGTTG...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGACCTTTCCTTCAATGGTaGATGTGGAGTGACTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRPFLQW*MWSDCA Trigger: TGCACAGTCACTCCACATCCACCATTGAAGGAAAGG...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAAGCAGTTTTACAAGGTaGCTGGCATTCCCTGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRSSFTR*LAFPEH Trigger: ATGCTCAGGGAATGCCAGCCACCTTGTAAAACTGCT...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAGGTTCAGTACACAGATaGAATGCAACATGGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRGSVHR*NATWNP Trigger: TGGGTTCCATGTTGCATTTCATCTGTGTACTGAACC...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | TTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAACAACTACAGAACCACGTGTCATaGCTGAGTCACATCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FSTQMKCNMEPSLLSEQLQNHVS*LSHIFL Trigger: CAGGAAGATGTGACTCAGCCATGACACGTGGTTCTG...TAGTTGTTCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | TTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAACAACTATTCAAACTGTGGTCCTaGAGAGTGTATCCCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: FSTQMKCNMEPSLLSEQLFKLWS*RVYPIL Trigger: CAAGATGGGATACACTCTTCAGGACCACAGTTTGAA...TAGTTGTTCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | TTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAACAACTACATGGTATGAGTGGTTaGAATCTTTCATGGTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: FSTQMKCNMEPSLLSEQLHGMSG*NLSWWD Trigger: ATCCCACCATGAAAGATTTCAACCACTCATACCATG...TAGTTGTTCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR TCA 90 bp | TTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAACAACTAACCACAGGCATGGTATaGGTGGTTGAAATCTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: FSTQMKCNMEPSLLSEQLTTGMV*VVEIFH Trigger: ATGAAAGATTTCAACCACTCATACCATGCCTGTGGT...TAGTTGTTCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CCA 90 bp | TTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGAACAACTACAGGCATGGTATGAGTaGTTGAAATCTTTCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSTQMKCNMEPSLLSEQLQAWYE*LKSFMV Trigger: CACCATGAAAGATTTCAACCACTCATACCATGCCTG...TAGTTGTTCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CAA 90 bp | GAGTCACATCTTCCTGCCCTTGGAATGAGAGGCACAGCGGAAGACCTTCCCATGAGAGTGTATCCCATCTaGCAGAGGTGGGGAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ESHLPALGMRGTAEDLPMRVYPI*QRWGAW Trigger: CCAGGCTCCCCACCTCTGCAAGATGGGATACACTCT...CATGGGAAGGTCTTCCGCTGTGCCTCTCATTCCAAGGGCAGGAAGATGTGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CAA 90 bp | AGGTGGCTGGCATTCCCTGAGCATATTCTGAATTGCACTGTGGGGAAAGAGGTTACCCATGCAGGGCTGTaGTGCTGTGGGAAATCAGAT | + |
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Preference number: 5 (lower is better) Translates to: RWLAFPEHILNCTVGKEVTHAGL*CCGKSD Trigger: ATCTGATTTCCCACAGCACAACAGCCCTGCATGGGT...AACCTCTTTCCCCACAGTGCAATTCAGAATATGCTCAGGGAATGCCAGCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CAA 90 bp | AGGTGGCTGGCATTCCCTGAGCATATTCTGAATTGCACTGTGGGGAAAGAGGTTAATGCGAGCACCTGTTaGACCCAGACAACCTTCACT | + |
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Preference number: 5 (lower is better) Translates to: RWLAFPEHILNCTVGKEVNASTC*TQTTFT Trigger: AGTGAAGGTTGTCTGGGTCAAACAGGTGCTCGCATT...AACCTCTTTCCCCACAGTGCAATTCAGAATATGCTCAGGGAATGCCAGCCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CAA 90 bp | ACCAGGCAATATTCACAGTGTAGAGACTGTCAGATGACCATGGCTAGCATGGAACTGTGGGGAAAGAGGTaGTGCTCAGTTGTAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: TRQYSQCRDCQMTMASMELWGKR*CSVVGW Trigger: CCACCCTACAACTGAGCACAACCTCTTTCCCCACAG...TTCCATGCTAGCCATGGTCATCTGACAGTCTCTACACTGTGAATATTGCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CAA 90 bp | TTCTCTCTTCCAACACGTCCACTCACCCCTTGGGAGACCCTCAAAAGCCAGTTAACTATCACCTCGGACTaGTCCATTCGATACTGCATT | + |
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Preference number: 5 (lower is better) Translates to: FSLPTRPLTPWETLKSQLTITSD*SIRYCI Trigger: AATGCAGTATCGAATGGACAAGTCCGAGGTGATAGT...TAACTGGCTTTTGAGGGTCTCCCAAGGGGTGAGTGGACGTGTTGGAAGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CAA 90 bp | CTTGTGGGAATCATGCTTTTCTCCCAGCAGTTTTACAAGGTGGCTGGCATTCCCCAGCAAGTCATTTCTTaGAGGAGAGTCTTGATCACC | + |
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Preference number: 5 (lower is better) Translates to: LVGIMLFSQQFYKVAGIPQQVIS*RRVLIT Trigger: GGTGATCAAGACTCTCCTCAAAGAAATGACTTGCTG...GGGAATGCCAGCCACCTTGTAAAACTGCTGGGAGAAAAGCATGATTCCCACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CAA 90 bp | CTTGTGGGAATCATGCTTTTCTCCCAGCAGTTTTACAAGGTGGCTGGCATTCCCTTCAGAGCACTTTCATaGTGGTTTTGGACCTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LVGIMLFSQQFYKVAGIPFRALS*WFWTSD Trigger: ATCTGAGGTCCAAAACCACAATGAAAGTGCTCTGAA...GGGAATGCCAGCCACCTTGTAAAACTGCTGGGAGAAAAGCATGATTCCCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS-3UTR CAA 90 bp | CTAGTGGTTCAGTACACAGATGAAATGCAACATGGAACCCAGTTTATTATCAGATCTTTGAGGAGAGTCTaGATCACCAGGCAATATTCA | + |
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Preference number: 5 (lower is better) Translates to: LVVQYTDEMQHGTQFIIRSLRRV*ITRQYS Trigger: TGAATATTGCCTGGTGATCAAGACTCTCCTCAAAGA...TCTGATAATAAACTGGGTTCCATGTTGCATTTCATCTGTGTACTGAACCACTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374358.5 |
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| CDS CCA 90 bp | ACAAAGGTGATACCAATGAGAAATCATAGCAATTCTGTATCTCACTaGCTAAAAGCAAGGTATTTAAGTGAGGAGATCCCTTTTAATACA | + |
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Preference number: 5 (lower is better) Translates to: TKVIPMRNHSNSVSH*LKARYLSEEIPFNT Trigger: TGTATTAAAAGGGATCTCCTCACTTAAATACCTTGCTTTTAGCCAGTGAGATACAGAATTGCTATGATTTCTCATTGGTATCACCTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487234.1 |
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| CDS GCA 72 bp | TCCATTCGATACTGCATTAATCGTCCAGCCCCGTCGTaGAGTGGTTCCGGAGCCCGGTGTCGCGCCGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: SIRYCINRPAPS*SGSGARCRAAP Trigger: CGGCGCGGCGCGACACCGGGCTCCGGAACCACTGCACGACGGGGCTGGACGATTAATGCAGTATCGAATGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491936.5 |
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| CDS CAA 90 bp | ACCTGTTTGACCCAGACAACCTTCACTGTAACTATCACCTCGGACTaGTCCATTCGATACTGCATTAATCGTCCAGCCCCGTCGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TCLTQTTFTVTITSD*SIRYCINRPAPSCS Trigger: ACTGCACGACGGGGCTGGACGATTAATGCAGTATCGAATGGACAAGTCCGAGGTGATAGTTACAGTGAAGGTTGTCTGGGTCAAACAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491936.5 |
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| CDS CAA 72 bp | ACCCAGACAACCTTCACTGTAACTATCACCTCGGACTaGTCCATTCGATACTGCATTAATCGTCCAGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: TQTTFTVTITSD*SIRYCINRPAP Trigger: CGGGGCTGGACGATTAATGCAGTATCGAATGGACAAGTCCGAGGTGATAGTTACAGTGAAGGTTGTCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491936.5 |
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| CDS CAA 90 bp | ACCTGTTTGACCCAGACAACCTTCACTGTAACTATCACCTCGGACTaGTCCATTCGATACTGCATTAATCTAGTACACCAGCAGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: TCLTQTTFTVTITSD*SIRYCINLVHQQQW Trigger: CCATTGCTGCTGGTGTACTAGATTAATGCAGTATCGAATGGACAAGTCCGAGGTGATAGTTACAGTGAAGGTTGTCTGGGTCAAACAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498135.5 |
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| CDS CAA 72 bp | ACCCAGACAACCTTCACTGTAACTATCACCTCGGACTaGTCCATTCGATACTGCATTAATCTAGTACACCAG | + |
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Preference number: 6 (lower is better) Translates to: TQTTFTVTITSD*SIRYCINLVHQ Trigger: CTGGTGTACTAGATTAATGCAGTATCGAATGGACAAGTCCGAGGTGATAGTTACAGTGAAGGTTGTCTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498135.5 |
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| CDS TCA 72 bp | GAAGGCTATGGTTGCTATAACACCACAGGCATGGTATaGGTGGTTGAAATCTTTCATGGTGGGATAAATAAC | + |
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Preference number: 6 (lower is better) Translates to: EGYGCYNTTGMV*VVEIFHGGINN Trigger: GTTATTTATCCCACCATGAAAGATTTCAACCACTCATACCATGCCTGTGGTGTTATAGCAACCATAGCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000374358.5 ENST00000468704.1 ENST00000480937.5 ENST00000487234.1 |
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