Pregenerated sensors for TMEM47 (Homo sapiens)
Ensembl gene IDs: ENSG00000147027Ensembl transcript IDs: ENST00000275954.4
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAGCACATGTCTCCAAGTCTTGACTCTCTTCCCAGGGAGACGCTaGTTGCCAAAGCATAACCTCCCATTAAAAAGAGTGTTCCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: RSTCLQVLTLFPGRR*LPKHNLPLKRVFLK Trigger: CTTCAGGAACACTCTTTTTAATGGGAGGTTATGCTTTGGCAATCAGCGTCTCCCTGGGAAGAGAGTCAAGACTTGGAGACATGTGCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR GCA 90 bp | ATCCTTGTCAGCGCAAAGGAACTTCTAAATGTTGCTTATGCCAACTaGTCCCCTGCAGGCAATAGGAGATTGAGGCAAATCTCATTCCAA | + |
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Preference number: 1 (lower is better) Translates to: ILVSAKELLNVAYAN*SPAGNRRLRQISFQ Trigger: TTGGAATGAGATTTGCCTCAATCTCCTATTGCCTGCAGGGGAGCAGTTGGCATAAGCAACATTTAGAAGTTCCTTTGCGCTGACAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR TCA 90 bp | CAGAGGCATAGGTTAGAGTGCACTGCTCTGTACAAAAATACAGTCTaGATAAATTACATTGCTAGCCATACAATTAGACGTCACTTACCA | + |
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Preference number: 1 (lower is better) Translates to: QRHRLECTALYKNTV*INYIASHTIRRHLP Trigger: TGGTAAGTGACGTCTAATTGTATGGCTAGCAATGTAATTTATTCAGACTGTATTTTTGTACAGAGCAGTGCACTCTAACCTATGCCTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR GCA 90 bp | TGTTTAGTTGCTGAAATCCCTATCCAAATATCATATTTCTCATGCTaGTCTGACAATATGCAATTAACTGCAAGACACTCTGCCCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: CLVAEIPIQISYFSC*SDNMQLTARHSAPD Trigger: ATCTGGGGCAGAGTGTCTTGCAGTTAATTGCATATTGTCAGAGCAGCATGAGAAATATGATATTTGGATAGGGATTTCAGCAACTAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR TCA 90 bp | AAGCTTGTTACATACGCACACTTGTTTGCTGCAATGTTTGGCAAATaGTTTAAAGGGTACAAAAGCAACTCATGCAGATTTCTTTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: KLVTYAHLFAAMFGK*FKGYKSNSCRFLSV Trigger: AACAGAAAGAAATCTGCATGAGTTGCTTTTGTACCCTTTAAATCATTTGCCAAACATTGCAGCAAACAAGTGTGCGTATGTAACAAGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR GCA 90 bp | GACCCTTCATTTGTCAAGAAAAACGATATGAACATATTGGAAGTTTaGAGCATTTGCCTATGTCTAATCAGCTCTCTTAATTTGTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: DPSFVKKNDMNILEV*SICLCLISSLNLCR Trigger: TCTGCACAAATTAAGAGAGCTGATTAGACATAGGCAAATGCTGCAAACTTCCAATATGTTCATATCGTTTTTCTTGACAAATGAAGGGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR TCA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTCATGTCTCCAAGTCTTaGCTCTCTTCCCAGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSHVSKS*LSSQGD Trigger: GTCTCCCTGGGAAGAGAGTCAAGACTTGGAGACATG...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR GCA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTGTTGCTTATGCCAACTaGTCCCCTGCAGGCAATAGG | + |
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Preference number: 2 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSVAYAN*SPAGNR Trigger: CCTATTGCCTGCAGGGGAGCAGTTGGCATAAGCAAC...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATTGGTGTCAGCACCAAAGTCTTAGGCAACTCTATTaGCACTTTCCAGTGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: LHPLLGPREVPHWCQHQSLRQLY*HFPVKQ Trigger: CTGTTTCACTGGAAAGTGTCAATAGAGTTGCCTAAG...ACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR CAA 90 bp | CTAAATGTTGCTTATGCCAACTGCTCCCCTGCAGGCAATAGGAGATaGAGGCAAATCTCATTCCAACTAGTTTCTCACAATGGTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LNVAYANCSPAGNRR*RQISFQLVSHNGCC Trigger: ACAGCAACCATTGTGAGAAACTAGTTGGAATGAGATTTGCCTCAATCTCCTATTGCCTGCAGGGGAGCAGTTGGCATAAGCAACATTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR TCA 90 bp | TGGCAACCATTCTTAAGACAAGCTGAAAGAAGAACTGTGTTTTGGGAGGTAAAATTCCCAGGGAGACGCTaGTTGCCAAAGCATAACCTC | + |
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Preference number: 2 (lower is better) Translates to: WQPFLRQAERRTVFWEVKFPGRR*LPKHNL Trigger: GAGGTTATGCTTTGGCAATCAGCGTCTCCCTGGGAA...TTTTACCTCCCAAAACACAGTTCTTCTTTCAGCTTGTCTTAAGAATGGTTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR GCA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTATACGCACACTTGTTTaGTGCAATGTTTGGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSIRTLV*CNVWQM Trigger: CATTTGCCAAACATTGCAGCAAACAAGTGTGCGTAT...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR GCA 90 bp | TGCACAAATCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGAAACATATTGGAAGTTTaGAGCATTTGCCTATGTCTA | + |
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Preference number: 2 (lower is better) Translates to: CTNRLAHQLTSEDQVITRNILEV*SICLCL Trigger: TAGACATAGGCAAATGCTGCAAACTTCCAATATGTT...TCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGATTTGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR TCA 90 bp | ATTAACCAGTTACATTCACAACTCCCATTAGATGCTGAAGGGCAGTTCATTTTTCAGGCAATAGGAGATTaGGGCAAATCTCATTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: INQLHSQLPLDAEGQFIFQAIGD*GKSHSN Trigger: GTTGGAATGAGATTTGCCTCAATCTCCTATTGCCTG...AAAAATGAACTGCCCTTCAGCATCTAATGGGAGTTGTGAATGTAACTGGTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CCA 90 bp | TGGCAACCATTCTTAAGACAAGCTGAAAGAAGAACTGTGTTTTGGGAGGTAAAAACTAGTTTCTCACAATaGTTGCTGTCATATAGACCC | + |
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Preference number: 2 (lower is better) Translates to: WQPFLRQAERRTVFWEVKTSFSQ*LLSYRP Trigger: GGGTCTATATGACAGCAACCATTGTGAGAAACTAGT...TTTTACCTCCCAAAACACAGTTCTTCTTTCAGCTTGTCTTAAGAATGGTTGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CCA 90 bp | TGGCAACCATTCTTAAGACAAGCTGAAAGAAGAACTGTGTTTTGGGAGGTAAAAATAGGCAAATGTATGTaGAGGGTTAGGGAACAACTT | + |
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Preference number: 2 (lower is better) Translates to: WQPFLRQAERRTVFWEVKIGKCM*RVREQL Trigger: AAGTTGTTCCCTAACCCTCCACATACATTTGCCTAT...TTTTACCTCCCAAAACACAGTTCTTCTTTCAGCTTGTCTTAAGAATGGTTGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR TCA 90 bp | GAAAAACGATATGAACATATTGGAAGTTTGCAGCATTTGCCTATGTCTAATCAGACTGAGCAAACTGCTTaGTGCTCCACAAGTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: EKRYEHIGSLQHLPMSNQTEQTA*CSTSVL Trigger: TAAAACACTTGTGGAGCATCAAGCAGTTTGCTCAGT...CTGATTAGACATAGGCAAATGCTGCAAACTTCCAATATGTTCATATCGTTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR GCA 90 bp | ATTAACCAGTTACATTCACAACTCCCATTAGATGCTGAAGGGCAGTTCATTTTTGAAGTTTGCAGCATTTaGCTATGTCTAATCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: INQLHSQLPLDAEGQFIFEVCSI*LCLISS Trigger: AGAGCTGATTAGACATAGGCAAATGCTGCAAACTTC...AAAAATGAACTGCCCTTCAGCATCTAATGGGAGTTGTGAATGTAACTGGTTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | CTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATTGGTGTCAGCACCAAAGTCTAACAGTGGAATCCTaGTCAGCGCAAAGGAACTTC | + |
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Preference number: 3 (lower is better) Translates to: LHPLLGPREVPHWCQHQSLTVES*SAQRNF Trigger: GAAGTTCCTTTGCGCTGACAAGGATTCCACTGTTAG...ACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | CAGCGCAAAGGAACTTCTAAATGTTGCTTATGCCAACTGCTCCCCTGCAGGCAAGGAAGTTTGCAGCATTaGCCTATGTCTAATCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: QRKGTSKCCLCQLLPCRQGSLQH*PMSNQL Trigger: GAGCTGATTAGACATAGGCAAATGCTGCAAACTTCC...TTGCCTGCAGGGGAGCAGTTGGCATAAGCAACATTTAGAAGTTCCTTTGCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR GCA 72 bp | AGCGCAAAGGAACTTCTAAATGTTGCTTATGCCAACTaGTCCCCTGCAGGCAATAGGAGATTGAGGCAAATC | + |
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Preference number: 3 (lower is better) Translates to: SAKELLNVAYAN*SPAGNRRLRQI Trigger: GATTTGCCTCAATCTCCTATTGCCTGCAGGGGAGCAGTTGGCATAAGCAACATTTAGAAGTTCCTTTGCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | TGCACAAATCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGAGCAGGCAATAGGAGATaGAGGCAAATCTCATTCCAA | + |
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Preference number: 3 (lower is better) Translates to: CTNRLAHQLTSEDQVITRAGNRR*RQISFQ Trigger: TTGGAATGAGATTTGCCTCAATCTCCTATTGCCTGC...TCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGATTTGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | CAGCGCAAAGGAACTTCTAAATGTTGCTTATGCCAACTGCTCCCCTGCAGGCAAAACGATATGAACATATaGGAAGTTTGCAGCATTTGC | + |
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Preference number: 3 (lower is better) Translates to: QRKGTSKCCLCQLLPCRQNDMNI*EVCSIC Trigger: GCAAATGCTGCAAACTTCCAATATGTTCATATCGTT...TTGCCTGCAGGGGAGCAGTTGGCATAAGCAACATTTAGAAGTTCCTTTGCGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | TGCACAAATCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGAAGTTTCTCACAATGGTaGCTGTCATATAGACCCTTC | + |
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Preference number: 3 (lower is better) Translates to: CTNRLAHQLTSEDQVITRSFSQW*LSYRPF Trigger: GAAGGGTCTATATGACAGCAACCATTGTGAGAAACT...TCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGATTTGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | TGCACAAATCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGACAGATTTCTTTCTGTTaGCCCCAGGAAAAACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: CTNRLAHQLTSEDQVITRQISFC*PQEKQR Trigger: TCTCTGTTTTTCCTGGGGCAAACAGAAAGAAATCTG...TCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGATTTGTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | CTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATTGGTGTCAGCACCAAAGTAGAATTAACACAAGTTaGCAGCATGAGATTAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: LHPLLGPREVPHWCQHQSRINTS*QHEISC Trigger: GCAACTAATCTCATGCTGCAAACTTGTGTTAATTCT...ACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR CCA 72 bp | CTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATTaGTGTCAGCACCAAAGTACTATTCTTTCATTATTC | + |
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Preference number: 3 (lower is better) Translates to: LHPLLGPREVPH*CQHQSTILSLF Trigger: GAATAATGAAAGAATAGTACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTAAGCTGGTTATGATGTaGACAGCCAAAAGGCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSKLVMM*TAKRQK Trigger: TTTTTGCCTTTTGGCTGTCAACATCATAACCAGCTT...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTGAACATATTGGAAGTTaGCAGCATTTGCCTATGTCT | + |
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Preference number: 3 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSEHIGS*QHLPMS Trigger: AGACATAGGCAAATGCTGCAAACTTCCAATATGTTC...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | CACAAAATGATCATCCTAATTGCTACTCTCTTTTCAACTACAGTGCTTACAGAGACATGTCTCCAAGTCTaGACTCTCTTCCCAGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: HKMIILIATLFSTTVLTETCLQV*TLFPGR Trigger: TCTCCCTGGGAAGAGAGTCAAGACTTGGAGACATGT...CTCTGTAAGCACTGTAGTTGAAAAGAGAGTAGCAATTAGGATGATCATTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | GAAAAACGATATGAACATATTGGAAGTTTGCAGCATTTGCCTATGTCTAATCAGGCAGACGTAATCCTTTaGTTGGATGGTGGTGGTTGT | + |
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Preference number: 3 (lower is better) Translates to: EKRYEHIGSLQHLPMSNQADVIL*LDGGGC Trigger: ACAACCACCACCATCCAACAAAAGGATTACGTCTGC...CTGATTAGACATAGGCAAATGCTGCAAACTTCCAATATGTTCATATCGTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR-3UTR CAA 90 bp | TGGCAACCATTCTTAAGACAAGCTGAAAGAAGAACTGTGTTTTGGGAGGTAAAACATACGCACACTTGTTaGCTGCAATGTTTGGCAAAT | + |
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Preference number: 3 (lower is better) Translates to: WQPFLRQAERRTVFWEVKHTHTC*LQCLAN Trigger: ATTTGCCAAACATTGCAGCAAACAAGTGTGCGTATG...TTTTACCTCCCAAAACACAGTTCTTCTTTCAGCTTGTCTTAAGAATGGTTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR GCA 72 bp | GCTGAAATCCCTATCCAAATATCATATTTCTCATGCTaGTCTGACAATATGCAATTAACTGCAAGACACTCT | + |
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Preference number: 3 (lower is better) Translates to: AEIPIQISYFSC*SDNMQLTARHS Trigger: AGAGTGTCTTGCAGTTAATTGCATATTGTCAGAGCAGCATGAGAAATATGATATTTGGATAGGGATTTCAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR CCA 72 bp | ATTGAGGCAAATCTCATTCCAACTAGTTTCTCACAATaGTTGCTGTCATATAGACCCTTCATTTGTCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: IEANLIPTSFSQ*LLSYRPFICQE Trigger: TTCTTGACAAATGAAGGGTCTATATGACAGCAACCATTGTGAGAAACTAGTTGGAATGAGATTTGCCTCAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | CAGCGCAAAGGAACTTCTAAATGTTGCTTATGCCAACTGCTCCCCTGCAGGCAAGAGAAGCCGCCGAGCTaGCACGCGCGGGGACTCGCT | + |
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Preference number: 4 (lower is better) Translates to: QRKGTSKCCLCQLLPCRQEKPPS*HARGLA Trigger: AGCGAGTCCCCGCGCGTGGCAGCTCGGCGGCTTCTC...TTGCCTGCAGGGGAGCAGTTGGCATAAGCAACATTTAGAAGTTCCTTTGCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | CAGCGCAAAGGAACTTCTAAATGTTGCTTATGCCAACTGCTCCCCTGCAGGCAAGTTGCTTATGCCAACTaGTCCCCTGCAGGCAATAGG | + |
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Preference number: 4 (lower is better) Translates to: QRKGTSKCCLCQLLPCRQVAYAN*SPAGNR Trigger: CCTATTGCCTGCAGGGGAGCAGTTGGCATAAGCAAC...TTGCCTGCAGGGGAGCAGTTGGCATAAGCAACATTTAGAAGTTCCTTTGCGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | CAGCGCAAAGGAACTTCTAAATGTTGCTTATGCCAACTGCTCCCCTGCAGGCAACAAACCCACCAGGAATaGAATGAGAATGATGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QRKGTSKCCLCQLLPCRQQTHQE*NENDGS Trigger: GCTGCCATCATTCTCATTGCATTCCTGGTGGGTTTG...TTGCCTGCAGGGGAGCAGTTGGCATAAGCAACATTTAGAAGTTCCTTTGCGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | CTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATTGGTGTCAGCACCAAAGTGGTAAAGGACCAGGCTaGAAACCTGTAAAACAACTG | + |
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Preference number: 4 (lower is better) Translates to: LHPLLGPREVPHWCQHQSGKGPG*KPVKQL Trigger: CAGTTGTTTTACAGGTTTGCAGCCTGGTCCTTTACC...ACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CCA 90 bp | CTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATTGGTGTCAGCACCAAAGTAGAGAAGTGCCTCATTaGTGTCAGCACCAAAGTACT | + |
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Preference number: 4 (lower is better) Translates to: LHPLLGPREVPHWCQHQSREVPH*CQHQST Trigger: AGTACTTTGGTGCTGACACCAATGAGGCACTTCTCT...ACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR TCA 90 bp | CTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATTGGTGTCAGCACCAAAGTACTCCCATTAGATGCTaGAGGGCAGTTCATTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LHPLLGPREVPHWCQHQSTPIRC*RAVHFS Trigger: TGAAAAATGAACTGCCCTTCAGCATCTAATGGGAGT...ACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | CAGCGCAAAGGAACTTCTAAATGTTGCTTATGCCAACTGCTCCCCTGCAGGCAAATACGCACACTTGTTTaGTGCAATGTTTGGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: QRKGTSKCCLCQLLPCRQIRTLV*CNVWQM Trigger: CATTTGCCAAACATTGCAGCAAACAAGTGTGCGTAT...TTGCCTGCAGGGGAGCAGTTGGCATAAGCAACATTTAGAAGTTCCTTTGCGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR CAA 72 bp | GCTTATGCCAACTGCTCCCCTGCAGGCAATAGGAGATaGAGGCAAATCTCATTCCAACTAGTTTCTCACAAT | + |
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Preference number: 4 (lower is better) Translates to: AYANCSPAGNRR*RQISFQLVSHN Trigger: ATTGTGAGAAACTAGTTGGAATGAGATTTGCCTCAATCTCCTATTGCCTGCAGGGGAGCAGTTGGCATAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR TCA 90 bp | TGGCAACCATTCTTAAGACAAGCTGAAAGAAGAACTGTGTTTTGGGAGGTAAAACATGTCTCCAAGTCTTaGCTCTCTTCCCAGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: WQPFLRQAERRTVFWEVKHVSKS*LSSQGD Trigger: GTCTCCCTGGGAAGAGAGTCAAGACTTGGAGACATG...TTTTACCTCCCAAAACACAGTTCTTCTTTCAGCTTGTCTTAAGAATGGTTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR TCA 90 bp | CTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATTGGTGTCAGCACCAAAGTGCAATGTTTGGCAAATaGTTTAAAGGGTACAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LHPLLGPREVPHWCQHQSAMFGK*FKGYKS Trigger: GCTTTTGTACCCTTTAAATCATTTGCCAAACATTGC...ACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR TCA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTGGCCATAACCCCAGTTaGACTCATGGTAAATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSGHNPS*THGKFS Trigger: TGAAAATTTACCATGAGTTCAACTGGGGTTATGGCC...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR TCA 90 bp | ATTAACCAGTTACATTCACAACTCCCATTAGATGCTGAAGGGCAGTTCATTTTTTTCCCAGGGAGACGCTaGTTGCCAAAGCATAACCTC | + |
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Preference number: 4 (lower is better) Translates to: INQLHSQLPLDAEGQFIFFPGRR*LPKHNL Trigger: GAGGTTATGCTTTGGCAATCAGCGTCTCCCTGGGAA...AAAAATGAACTGCCCTTCAGCATCTAATGGGAGTTGTGAATGTAACTGGTTAAT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR TCA 90 bp | TGCACAAATCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATTTCTCATGCTGCTCTaGCAATATGCAATTAACTGC | + |
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Preference number: 4 (lower is better) Translates to: CTNRLAHQLTSEDQVITRFLMLL*QYAINC Trigger: GCAGTTAATTGCATATTGTCAGAGCAGCATGAGAAA...TCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGATTTGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | CTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATTGGTGTCAGCACCAAAGTAACATATTGGAAGTTTaGAGCATTTGCCTATGTCTA | + |
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Preference number: 4 (lower is better) Translates to: LHPLLGPREVPHWCQHQSNILEV*SICLCL Trigger: TAGACATAGGCAAATGCTGCAAACTTCCAATATGTT...ACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTCAATATGCAATTAACTaGAAGACACTCTGCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSQYAIN*KTLCPR Trigger: TCTGGGGCAGAGTGTCTTGCAGTTAATTGCATATTG...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CCA 90 bp | TGCACAAATCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGAATAGGCAAATGTATGTaGAGGGTTAGGGAACAACTT | + |
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Preference number: 4 (lower is better) Translates to: CTNRLAHQLTSEDQVITRIGKCM*RVREQL Trigger: AAGTTGTTCCCTAACCCTCCACATACATTTGCCTAT...TCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGATTTGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR TCA 90 bp | TGGCAACCATTCTTAAGACAAGCTGAAAGAAGAACTGTGTTTTGGGAGGTAAAACTGCTGCAAAAAGCATaGCCGCAACAGGTCTATAGA | + |
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Preference number: 4 (lower is better) Translates to: WQPFLRQAERRTVFWEVKLLQKA*PQQVYR Trigger: TCTATAGACCTGTTGCGGTCATGCTTTTTGCAGCAG...TTTTACCTCCCAAAACACAGTTCTTCTTTCAGCTTGTCTTAAGAATGGTTGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTGAAGTTTGCAGCATTTaGCTATGTCTAATCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSEVCSI*LCLISS Trigger: AGAGCTGATTAGACATAGGCAAATGCTGCAAACTTC...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | ATTAACCAGTTACATTCACAACTCCCATTAGATGCTGAAGGGCAGTTCATTTTTCAGGGAGACGCTGATTaGCAAAGCATAACCTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: INQLHSQLPLDAEGQFIFQGDAD*QSITSH Trigger: ATGGGAGGTTATGCTTTGGCAATCAGCGTCTCCCTG...AAAAATGAACTGCCCTTCAGCATCTAATGGGAGTTGTGAATGTAACTGGTTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CCA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTACTAGTTTCTCACAATaGTTGCTGTCATATAGACCC | + |
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Preference number: 4 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSTSFSQ*LLSYRP Trigger: GGGTCTATATGACAGCAACCATTGTGAGAAACTAGT...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| 3UTR CAA 72 bp | ACTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATaGGTGTCAGCACCAAAGTACTATTCTTTCATTATT | + |
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Preference number: 4 (lower is better) Translates to: TASSTRTKRSAS*VSAPKYYSFII Trigger: AATAATGAAAGAATAGTACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR TCA 90 bp | TGGCAACCATTCTTAAGACAAGCTGAAAGAAGAACTGTGTTTTGGGAGGTAAAACAGGCAATAGGAGATTaGGGCAAATCTCATTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: WQPFLRQAERRTVFWEVKQAIGD*GKSHSN Trigger: GTTGGAATGAGATTTGCCTCAATCTCCTATTGCCTG...TTTTACCTCCCAAAACACAGTTCTTCTTTCAGCTTGTCTTAAGAATGGTTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR TCA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTCATATTCTGTCACTTTaGGCTTGTCATATTGACAGA | + |
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Preference number: 4 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSHILSL*ACHIDR Trigger: TCTGTCAATATGACAAGCTCAAAGTGACAGAATATG...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | TGGCAACCATTCTTAAGACAAGCTGAAAGAAGAACTGTGTTTTGGGAGGTAAAAAAACGAAAATATAGTTaGACCCCAGGCCAGGCCATA | + |
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Preference number: 4 (lower is better) Translates to: WQPFLRQAERRTVFWEVKKRKYS*TPGQAI Trigger: TATGGCCTGGCCTGGGGTGCAACTATATTTTCGTTT...TTTTACCTCCCAAAACACAGTTCTTCTTTCAGCTTGTCTTAAGAATGGTTGCCA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTGAATTAACACAAGTTTaGAGCATGAGATTAGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSELTQV*SMRLVA Trigger: TGCAACTAATCTCATGCTGCAAACTTGTGTTAATTC...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR TCA 90 bp | CACAAAATGATCATCCTAATTGCTACTCTCTTTTCAACTACAGTGCTTACAGAGACTGAGCAAACTGCTTaGTGCTCCACAAGTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: HKMIILIATLFSTTVLTETEQTA*CSTSVL Trigger: TAAAACACTTGTGGAGCATCAAGCAGTTTGCTCAGT...CTCTGTAAGCACTGTAGTTGAAAAGAGAGTAGCAATTAGGATGATCATTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR TCA 90 bp | CACAAAATGATCATCCTAATTGCTACTCTCTTTTCAACTACAGTGCTTACAGAGCTTAGGCAACTCTATTaGCACTTTCCAGTGAAACAG | + |
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Preference number: 4 (lower is better) Translates to: HKMIILIATLFSTTVLTELRQLY*HFPVKQ Trigger: CTGTTTCACTGGAAAGTGTCAATAGAGTTGCCTAAG...CTCTGTAAGCACTGTAGTTGAAAAGAGAGTAGCAATTAGGATGATCATTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | CACAAAATGATCATCCTAATTGCTACTCTCTTTTCAACTACAGTGCTTACAGAGTCTAATGCTTCTTTCTaGAAGAGGGCCAAAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: HKMIILIATLFSTTVLTESNASF*KRAKTR Trigger: TCTGGTTTTGGCCCTCTTGCAGAAAGAAGCATTAGA...CTCTGTAAGCACTGTAGTTGAAAAGAGAGTAGCAATTAGGATGATCATTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CCA 90 bp | ATTAACCAGTTACATTCACAACTCCCATTAGATGCTGAAGGGCAGTTCATTTTTTTCAATGAACTTGATTaGGTAAAGGACCAGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: INQLHSQLPLDAEGQFIFFNELD*VKDQAA Trigger: TGCAGCCTGGTCCTTTACCCAATCAAGTTCATTGAA...AAAAATGAACTGCCCTTCAGCATCTAATGGGAGTTGTGAATGTAACTGGTTAAT 39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | GAAAAACGATATGAACATATTGGAAGTTTGCAGCATTTGCCTATGTCTAATCAGAGGCATAGGTTAGAGTaGACTGCTCTGTACAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: EKRYEHIGSLQHLPMSNQRHRLE*TALYKN Trigger: ATTTTTGTACAGAGCAGTGCACTCTAACCTATGCCT...CTGATTAGACATAGGCAAATGCTGCAAACTTCCAATATGTTCATATCGTTTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR GCA 90 bp | GAAAAACGATATGAACATATTGGAAGTTTGCAGCATTTGCCTATGTCTAATCAGAGATTTCTTTCTGTTTaGCCCAGGAAAAACAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: EKRYEHIGSLQHLPMSNQRFLSV*PRKNRD Trigger: ATCTCTGTTTTTCCTGGGGCAAACAGAAAGAAATCT...CTGATTAGACATAGGCAAATGCTGCAAACTTCCAATATGTTCATATCGTTTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CCA 90 bp | ATTAACCAGTTACATTCACAACTCCCATTAGATGCTGAAGGGCAGTTCATTTTTCAAACTCAAAATCACTaGAGTGATAAACAGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: INQLHSQLPLDAEGQFIFQTQNH*SDKQVF Trigger: GAAAACCTGTTTATCACTCCAGTGATTTTGAGTTTG...AAAAATGAACTGCCCTTCAGCATCTAATGGGAGTTGTGAATGTAACTGGTTAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CCA 90 bp | GAAAAACGATATGAACATATTGGAAGTTTGCAGCATTTGCCTATGTCTAATCAGTTTGGCTGTTGTTTTTaGCAACCATTCTTAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: EKRYEHIGSLQHLPMSNQFGCCF*QPFLRQ Trigger: TTGTCTTAAGAATGGTTGCCAAAAACAACAGCCAAA...CTGATTAGACATAGGCAAATGCTGCAAACTTCCAATATGTTCATATCGTTTTTC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | CTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATTGGTGTCAGCACCAAAGTAAGAGAAGTGCCTCATaGGTGTCAGCACCAAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: LHPLLGPREVPHWCQHQSKRSAS*VSAPKY Trigger: GTACTTTGGTGCTGACACCAATGAGGCACTTCTCTT...ACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | CAGCGCAAAGGAACTTCTAAATGTTGCTTATGCCAACTGCTCCCCTGCAGGCAAGCAGGCAATAGGAGATaGAGGCAAATCTCATTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QRKGTSKCCLCQLLPCRQAGNRR*RQISFQ Trigger: TTGGAATGAGATTTGCCTCAATCTCCTATTGCCTGC...TTGCCTGCAGGGGAGCAGTTGGCATAAGCAACATTTAGAAGTTCCTTTGCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | TGCACAAATCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGACTAACAGTGGAATCCTaGTCAGCGCAAAGGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: CTNRLAHQLTSEDQVITRLTVES*SAQRNF Trigger: GAAGTTCCTTTGCGCTGACAAGGATTCCACTGTTAG...TCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGATTTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTACATGTCTCCAAGTCTaGACTCTCTTCCCAGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSTCLQV*TLFPGR Trigger: TCTCCCTGGGAAGAGAGTCAAGACTTGGAGACATGT...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | CTGCATCCTCTACTAGGACCAAGAGAAGTGCCTCATTGGTGTCAGCACCAAAGTCAGATTTCTTTCTGTTaGCCCCAGGAAAAACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: LHPLLGPREVPHWCQHQSQISFC*PQEKQR Trigger: TCTCTGTTTTTCCTGGGGCAAACAGAAAGAAATCTG...ACTTTGGTGCTGACACCAATGAGGCACTTCTCTTGGTCCTAGTAGAGGATGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | TGCACAAATCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGAGGAAGTTTGCAGCATTaGCCTATGTCTAATCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: CTNRLAHQLTSEDQVITRGSLQH*PMSNQL Trigger: GAGCTGATTAGACATAGGCAAATGCTGCAAACTTCC...TCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGATTTGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | TCGGTTAGCCCATCAGTTAACTTCAGAGGACCAGGTGATAACCAGATGAATTCTAGTTTCTCACAATGGTaGCTGTCATATAGACCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SVSPSVNFRGPGDNQMNSSFSQW*LSYRPF Trigger: GAAGGGTCTATATGACAGCAACCATTGTGAGAAACT...AGAATTCATCTGGTTATCACCTGGTCCTCTGAAGTTAACTGATGGGCTAACCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | ATTAACCAGTTACATTCACAACTCCCATTAGATGCTGAAGGGCAGTTCATTTTTGCAGACGTAATCCTTTaGTTGGATGGTGGTGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: INQLHSQLPLDAEGQFIFADVIL*LDGGGC Trigger: ACAACCACCACCATCCAACAAAAGGATTACGTCTGC...AAAAATGAACTGCCCTTCAGCATCTAATGGGAGTTGTGAATGTAACTGGTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | TGGCAACCATTCTTAAGACAAGCTGAAAGAAGAACTGTGTTTTGGGAGGTAAAAAAGCTGGTTATGATGTaGACAGCCAAAAGGCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: WQPFLRQAERRTVFWEVKKLVMM*TAKRQK Trigger: TTTTTGCCTTTTGGCTGTCAACATCATAACCAGCTT...TTTTACCTCCCAAAACACAGTTCTTCTTTCAGCTTGTCTTAAGAATGGTTGCCA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | TGGCAACCATTCTTAAGACAAGCTGAAAGAAGAACTGTGTTTTGGGAGGTAAAAGAACATATTGGAAGTTaGCAGCATTTGCCTATGTCT | + |
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Preference number: 5 (lower is better) Translates to: WQPFLRQAERRTVFWEVKEHIGS*QHLPMS Trigger: AGACATAGGCAAATGCTGCAAACTTCCAATATGTTC...TTTTACCTCCCAAAACACAGTTCTTCTTTCAGCTTGTCTTAAGAATGGTTGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | ATTAACCAGTTACATTCACAACTCCCATTAGATGCTGAAGGGCAGTTCATTTTTCATACGCACACTTGTTaGCTGCAATGTTTGGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: INQLHSQLPLDAEGQFIFHTHTC*LQCLAN Trigger: ATTTGCCAAACATTGCAGCAAACAAGTGTGCGTATG...AAAAATGAACTGCCCTTCAGCATCTAATGGGAGTTGTGAATGTAACTGGTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | ATTAACCAGTTACATTCACAACTCCCATTAGATGCTGAAGGGCAGTTCATTTTTAACGATATGAACATATaGGAAGTTTGCAGCATTTGC | + |
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Preference number: 5 (lower is better) Translates to: INQLHSQLPLDAEGQFIFNDMNI*EVCSIC Trigger: GCAAATGCTGCAAACTTCCAATATGTTCATATCGTT...AAAAATGAACTGCCCTTCAGCATCTAATGGGAGTTGTGAATGTAACTGGTTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS-3UTR CAA 90 bp | GAAAAACGATATGAACATATTGGAAGTTTGCAGCATTTGCCTATGTCTAATCAGAGAATTAACACAAGTTaGCAGCATGAGATTAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: EKRYEHIGSLQHLPMSNQRINTS*QHEISC Trigger: GCAACTAATCTCATGCTGCAAACTTGTGTTAATTCT...CTGATTAGACATAGGCAAATGCTGCAAACTTCCAATATGTTCATATCGTTTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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| CDS TCA 72 bp | GGCTGCAAACCTGTAAAACAACTGCTGCAAAAAGCATaGCCGCAACAGGTCTATAGAAACGCCTTCGAGATC | + |
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Preference number: 6 (lower is better) Translates to: GCKPVKQLLQKA*PQQVYRNAFEI Trigger: GATCTCGAAGGCGTTTCTATAGACCTGTTGCGGTCATGCTTTTTGCAGCAGTTGTTTTACAGGTTTGCAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000275954.4 |
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