Pregenerated sensors for TMEM38B (Homo sapiens)
Ensembl gene IDs: ENSG00000095209Ensembl transcript IDs: ENST00000374688.5, ENST00000374692.8, ENST00000434214.1, ENST00000435034.5, ENST00000451560.1
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAGGCCTTATTCACACTTCACATTGGGTAAGGAGTCTAACAATCTaGTTTGCAAATCCAAGTCAAGACTCTACAGGTGACCTGAATAGA | + |
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Preference number: 1 (lower is better) Translates to: IGLIHTSHWVRSLTI*FANPSQDSTGDLNR Trigger: TCTATTCAGGTCACCTGTAGAGTCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTGTGAATAAGGCCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTCTCTACCCACAGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACAAGCATTCCAAGACTATaGAAAGTGCCCCCTCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: WSLPTGRLPFPLKANNSTSIPRL*KVPPPN Trigger: ATTGGGAGGGGGCACTTTTCATAGTCTTGGAATGCT...TGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCTGTGGGTAGAGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR TCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTAAATGGACTGCCATATaGAGTTCTGGTTTCTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LTFSVPPLISCVRQAYRPKWTAI*SSGFSV Trigger: AACAGAGAAACCAGAACTTCATATGGCAGTCCATTT...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTACTCTACAGGTGACCTaGATAGATTCAGGATGGGTT | + |
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Preference number: 2 (lower is better) Translates to: REATISTESQQLHISGLSTLQVT*IDSGWV Trigger: AACCCATCCTGAATCTATTCAGGTCACCTGTAGAGT...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR GCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTAGGAGTCTAACAATCTaGTTTGCAAATCCAAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: LTFSVPPLISCVRQAYRPRSLTI*FANPSQ Trigger: TTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCT...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR CCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTTGCCATATGAAGTTCTaGTTTCTCTGTTTCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: LTFSVPPLISCVRQAYRPCHMKF*FLCFFL Trigger: CAAGAAGAAACAGAGAAACCAGAACTTCATATGGCA...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTGAATGTGATGTGACTTaGGTACTTCTAAACCATCGA | + |
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Preference number: 2 (lower is better) Translates to: REATISTESQQLHISGLSECDVT*VLLNHR Trigger: TCGATGGTTTAGAAGTACTCAAGTCACATCACATTC...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR CAA 90 bp | ATTAGCTGTGTGAGGCAGGCCTATAGGCCTTATTCACACTTCACATaGGGTAAGGAGTCTAACAATCTGCTTTGCAAATCCAAGTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: ISCVRQAYRPYSHFT*GKESNNLLCKSKSR Trigger: TCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTGTGAATAAGGCCTATAGGCCTGCCTCACACAGCTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTAGTCAAAATACTAGATaGGTTCTGAAACTCTACCTC | + |
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Preference number: 2 (lower is better) Translates to: REATISTESQQLHISGLSSQNTR*VLKLYL Trigger: GAGGTAGAGTTTCAGAACTCATCTAGTATTTTGACT...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTAGGAGTCTAACAATCTaGTTTGCAAATCCAAGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: REATISTESQQLHISGLSRSLTI*FANPSQ Trigger: TTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCT...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTTGCCATATGAAGTTCTaGTTTCTCTGTTTCTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: REATISTESQQLHISGLSCHMKF*FLCFFL Trigger: CAAGAAGAAACAGAGAAACCAGAACTTCATATGGCA...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTATTCACACTTCACATTaGGTAAGGAGTCTAACAATC | + |
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Preference number: 2 (lower is better) Translates to: REATISTESQQLHISGLSIHTSH*VRSLTI Trigger: GATTGTTAGACTCCTTACCCAATGTGAAGTGTGAAT...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCAAGCACTGAGGGAAGCTaGCTCATGTTCTTGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RKSILNTLFHLQHGMFHSSTEGS*LMFLPA Trigger: AGCTGGCAAGAACATGAGCCAGCTTCCCTCAGTGCT...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCACATCTCTCTACCTTTTaGTCTCTACCCACAGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RKSILNTLFHLQHGMFHSHLSTF*SLPTGR Trigger: CCTCCCTGTGGGTAGAGACCAAAAGGTAGAGAGATG...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTCACATTGGGTAAGGAGTCTAACAATCTGCTTTGCAAATCCAAGTCAAGAGAATGTGATGTGACTTaGGTACTTCTAAACCATCGA | + |
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Preference number: 2 (lower is better) Translates to: HFTLGKESNNLLCKSKSRECDVT*VLLNHR Trigger: TCGATGGTTTAGAAGTACTCAAGTCACATCACATTC...TCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTCACATTGGGTAAGGAGTCTAACAATCTGCTTTGCAAATCCAAGTCAAGAAGTCAAAATACTAGATaGGTTCTGAAACTCTACCTC | + |
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Preference number: 2 (lower is better) Translates to: HFTLGKESNNLLCKSKSRSQNTR*VLKLYL Trigger: GAGGTAGAGTTTCAGAACTCATCTAGTATTTTGACT...TCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCAAAATGGACTGCCATATaGAGTTCTGGTTTCTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: RKSILNTLFHLQHGMFHSKWTAI*SSGFSV Trigger: AACAGAGAAACCAGAACTTCATATGGCAGTCCATTT...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR CAA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTTATTCACACTTCACATaGGGTAAGGAGTCTAACAAT | + |
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Preference number: 3 (lower is better) Translates to: LTFSVPPLISCVRQAYRPYSHFT*GKESNN Trigger: ATTGTTAGACTCCTTACCCAATGTGAAGTGTGAATA...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR TCA 72 bp | GCTTTGCAAATCCAAGTCAAGACTCTACAGGTGACCTaGATAGATTCAGGATGGGTTTCAGGCCTAAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: ALQIQVKTLQVT*IDSGWVSGLSH Trigger: ATGGCTTAGGCCTGAAACCCATCCTGAATCTATTCAGGTCACCTGTAGAGTCTTGACTTGGATTTGCAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTCAAAAGAGCCTTGAATaGAGGGTTATAGGATACTTG | + |
|
Preference number: 3 (lower is better) Translates to: REATISTESQQLHISGLSQKSLE*RVIGYL Trigger: CAAGTATCCTATAACCCTCAATTCAAGGCTCTTTTG...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR GCA 72 bp | GCTTCACTTTTCTTCTCACATGATGAAAACGGCTGCTaGCAGCCAAATAGCATCCAACTCAATGTATCCTCA | + |
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Preference number: 3 (lower is better) Translates to: ASLFFSHDENGC*QPNSIQLNVSS Trigger: TGAGGATACATTGAGTTGGATGCTATTTGGCTGGCAGCAGCCGTTTTCATCATGTGAGAAGAAAAGTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435034.5 |
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| 3UTR CCA 72 bp | CATGTTTTACTTGAGAGTGACAGCACTGAGGGAAGCTaGCTCATGTTCTTGCCAGCTTTTTGTCTCCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: HVLLESDSTEGS*LMFLPAFCLLF Trigger: AAAAAGGAGACAAAAAGCTGGCAAGAACATGAGCCAGCTTCCCTCAGTGCTGTCACTCTCAAGTAAAACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTTATTCACACTTCACATaGGGTAAGGAGTCTAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: REATISTESQQLHISGLSYSHFT*GKESNN Trigger: ATTGTTAGACTCCTTACCCAATGTGAAGTGTGAATA...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR GCA 72 bp | ATTCACACTTCACATTGGGTAAGGAGTCTAACAATCTaGTTTGCAAATCCAAGTCAAGACTCTACAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: IHTSHWVRSLTI*FANPSQDSTGD Trigger: GTCACCTGTAGAGTCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTGTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCACAAAAGAGCCTTGAATaGAGGGTTATAGGATACTTG | + |
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Preference number: 3 (lower is better) Translates to: RKSILNTLFHLQHGMFHSQKSLE*RVIGYL Trigger: CAAGTATCCTATAACCCTCAATTCAAGGCTCTTTTG...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| 3UTR TCA 72 bp | CAACATGGGATGTTCCACTCAATTGTAATCAACTTGTaGTTTGAAGTAGATTTTAATGGAAAGGTGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QHGMFHSIVINL*FEVDFNGKVSG Trigger: CCCAGACACCTTTCCATTAAAATCTACTTCAAATCACAAGTTGATTACAATTGAGTGGAACATCCCATGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR CCA 90 bp | TGGTCTCTACCCACAGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACAAGCAGCCGCGGCTACTaGTTCCCCGCGCTCGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: WSLPTGRLPFPLKANNSTSSRGY*FPALAR Trigger: CCGCGCGAGCGCGGGGAACCAGTAGCCGCGGCTGCT...TGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCTGTGGGTAGAGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374692.8 |
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| CDS-3UTR TCA 90 bp | CACTTCACATTGGGTAAGGAGTCTAACAATCTGCTTTGCAAATCCAAGTCAAGACCCGCGCTCGCGCGGTaGGGAGTAGGAGAGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: HFTLGKESNNLLCKSKSRPALAR*GVGEGT Trigger: TGTGCCCTCTCCTACTCCTCACCGCGCGAGCGCGGG...TCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374692.8 |
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| CDS-3UTR GCA 90 bp | TGGTCTCTACCCACAGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACAATTCTTCCATGCCAATaGAGCTGCTCCCGGCTGACG | + |
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Preference number: 4 (lower is better) Translates to: WSLPTGRLPFPLKANNSTILPCQ*SCSRLT Trigger: CGTCAGCCGGGAGCAGCTGCATTGGCATGGAAGAAT...TGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCTGTGGGTAGAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374692.8 |
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| CDS-3UTR CCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTAGCACTGAGGGAAGCTaGCTCATGTTCTTGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPSTEGS*LMFLPA Trigger: AGCTGGCAAGAACATGAGCCAGCTTCCCTCAGTGCT...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR CCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTCCAGCAGGGTTACCTTaGCAGGGTATGACATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPPAGLP*QGMTSS Trigger: TGAAGATGTCATACCCTGCCAAGGTAACCCTGCTGG...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR CCA 90 bp | TGGTCTCTACCCACAGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACACATCTCTCTACCTTTTaGTCTCTACCCACAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: WSLPTGRLPFPLKANNSTHLSTF*SLPTGR Trigger: CCTCCCTGTGGGTAGAGACCAAAAGGTAGAGAGATG...TGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCTGTGGGTAGAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR TCA 90 bp | TGGTCTCTACCCACAGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACAGAATGTGAAGATAACTaGCCCCAGCAGGGTTACCTT | + |
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Preference number: 4 (lower is better) Translates to: WSLPTGRLPFPLKANNSTECEDN*PQQGYL Trigger: AAGGTAACCCTGCTGGGGTCAGTTATCTTCACATTC...TGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCTGTGGGTAGAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR TCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTGAATGTGAAGATAACTaGCCCCAGCAGGGTTACCTT | + |
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Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPECEDN*PQQGYL Trigger: AAGGTAACCCTGCTGGGGTCAGTTATCTTCACATTC...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR TCA 90 bp | CACTTCACATTGGGTAAGGAGTCTAACAATCTGCTTTGCAAATCCAAGTCAAGAGCAGCTGCTCCCGGCTaGCGTTTCACCGCCATCACT | + |
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Preference number: 4 (lower is better) Translates to: HFTLGKESNNLLCKSKSRAAAPG*RFTAIT Trigger: AGTGATGGCGGTGAAACGTCAGCCGGGAGCAGCTGC...TCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374692.8 |
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| CDS-3UTR GCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTGCCAGATGCTGGGTGTaGTGGAATGTGAAGATAACT | + |
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Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPARCWV*WNVKIT Trigger: AGTTATCTTCACATTCCAGCACACCCAGCATCTGGC...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR GCA 90 bp | TGGTCTCTACCCACAGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACAGATGAAAACGGCTGCTaGCAGCCAAATAGCATCCAA | + |
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Preference number: 4 (lower is better) Translates to: WSLPTGRLPFPLKANNSTDENGC*QPNSIQ Trigger: TTGGATGCTATTTGGCTGGCAGCAGCCGTTTTCATC...TGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCTGTGGGTAGAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR GCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTCATGATGAAAACGGCTaGTGCCAGCCAAATAGCATC | + |
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Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPHDENG*CQPNSI Trigger: GATGCTATTTGGCTGGCAGCAGCCGTTTTCATCATG...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR CCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTCCTCCACCAAAACAGTaGAGCATAGCAGTAAACCAG | + |
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Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPPPPKQ*SIAVNQ Trigger: CTGGTTTACTGCTATGCTCCACTGTTTTGGTGGAGG...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR CCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTATGACCCAACGCCATTaGAAGGTGACTTTGCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPMTQRH*KVTLLH Trigger: GTGAAGCAAAGTCACCTTCCAATGGCGTTGGGTCAT...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR CCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTACAACTCCACATATCTaGTCTCTCTCCAGCCCTTAC | + |
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Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPTTPHI*SLSSPY Trigger: GTAAGGGCTGGAGAGAGACCAGATATGTGGAGTTGT...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR TCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTACTCTACAGGTGACCTaGATAGATTCAGGATGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPTLQVT*IDSGWV Trigger: AACCCATCCTGAATCTATTCAGGTCACCTGTAGAGT...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR GCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTATTCTTCCATGCCAATaGAGCTGCTCCTGTTTGATC | + |
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Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPILPCQ*SCSCLI Trigger: GATCAAACAGGAGCAGCTGCATTGGCATGGAAGAAT...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374688.5 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTAATAGGATTCTTCCATaGCAATGCAGCTGCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: REATISTESQQLHISGLSNRILP*QCSCSR Trigger: CCGGGAGCAGCTGCATTGGCATGGAAGAATCCTATT...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374692.8 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTGCCAGATGCTGGGTGTaGTGGAATGTGAAGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: REATISTESQQLHISGLSARCWV*WNVKIT Trigger: AGTTATCTTCACATTCCAGCACACCCAGCATCTGGC...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTGATGAAAACGGCTGCTaGCAGCCAAATAGCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: REATISTESQQLHISGLSDENGC*QPNSIQ Trigger: TTGGATGCTATTTGGCTGGCAGCAGCCGTTTTCATC...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCTCTACCCACAGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACAGCAGCTGCTCCTGTTTaGTCTAAATATAAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WSLPTGRLPFPLKANNSTAAAPV*SKYKTD Trigger: ATCTGTCTTATATTTAGATCAAACAGGAGCAGCTGC...TGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCTGTGGGTAGAGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374688.5 |
||
| CDS-3UTR TCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTGAATGTGATGTGACTTaGGTACTTCTAAACCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPECDVT*VLLNHR Trigger: TCGATGGTTTAGAAGTACTCAAGTCACATCACATTC...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTCCATTCATCACCTTCTaGTTTCCAATCTCCTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPPFITF*FPISFY Trigger: GTAAAAGGAGATTGGAAACCAGAAGGTGATGAATGG...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCACTTTTCTTCTCACATGATGAAAACGGCTGCTGCCAGCCAAATAGCATCATGACCCAACGCCATTaGAAGGTGACTTTGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLFFSHDENGCCQPNSIMTQRH*KVTLLH Trigger: GTGAAGCAAAGTCACCTTCCAATGGCGTTGGGTCAT...GATGCTATTTGGCTGGCAGCAGCCGTTTTCATCATGTGAGAAGAAAAGTGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435034.5 |
||
| CDS-3UTR TCA 90 bp | TGGTCTCTACCCACAGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACAAGTCAAAATACTAGATaGGTTCTGAAACTCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSLPTGRLPFPLKANNSTSQNTR*VLKLYL Trigger: GAGGTAGAGTTTCAGAACTCATCTAGTATTTTGACT...TGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCTGTGGGTAGAGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCTCTACCCACAGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACAAGGAGTCTAACAATCTaGTTTGCAAATCCAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WSLPTGRLPFPLKANNSTRSLTI*FANPSQ Trigger: TTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCT...TGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCTGTGGGTAGAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTATTCACACTTCACATTaGGTAAGGAGTCTAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: LTFSVPPLISCVRQAYRPIHTSH*VRSLTI Trigger: GATTGTTAGACTCCTTACCCAATGTGAAGTGTGAAT...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| 3UTR CAA 72 bp | GTGAGGCAGGCCTATAGGCCTTATTCACACTTCACATaGGGTAAGGAGTCTAACAATCTGCTTTGCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VRQAYRPYSHFT*GKESNNLLCKS Trigger: GGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTGTGAATAAGGCCTATAGGCCTGCCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTAAATGGACTGCCATATaGAGTTCTGGTTTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: REATISTESQQLHISGLSKWTAI*SSGFSV Trigger: AACAGAGAAACCAGAACTTCATATGGCAGTCCATTT...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTCCATTCATCACCTTCTaGTTTCCAATCTCCTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: REATISTESQQLHISGLSPFITF*FPISFY Trigger: GTAAAAGGAGATTGGAAACCAGAAGGTGATGAATGG...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCTCTACCCACAGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACAATTCCATTTACAACATaGGATGTTCCACTCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: WSLPTGRLPFPLKANNSTIPFTT*DVPLNC Trigger: ACAATTGAGTGGAACATCCCATGTTGTAAATGGAAT...TGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCTGTGGGTAGAGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCACATTGGGTAAGGAGTCTAACAATCTGCTTTGCAAATCCAAGTCAAGAAGCCAACTCGTCCCATaGAGAATCCATAACGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HFTLGKESNNLLCKSKSRSQLVP*RIHNDH Trigger: GTGGTCGTTATGGATTCTCCATGGGACGAGTTGGCT...TCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374692.8 |
||
| CDS-3UTR TCA 90 bp | CACTTCACATTGGGTAAGGAGTCTAACAATCTGCTTTGCAAATCCAAGTCAAGAAGCATTCCAAGACTATaGAAAGTGCCCCCTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HFTLGKESNNLLCKSKSRSIPRL*KVPPPN Trigger: ATTGGGAGGGGGCACTTTTCATAGTCTTGGAATGCT...TCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCACATTGGGTAAGGAGTCTAACAATCTGCTTTGCAAATCCAAGTCAAGACCTCCACCAAAACAGTaGAGCATAGCAGTAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HFTLGKESNNLLCKSKSRPPPKQ*SIAVNQ Trigger: CTGGTTTACTGCTATGCTCCACTGTTTTGGTGGAGG...TCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR TCA 90 bp | GTATCCTCAAAAGGAGCAAATGTCATAGTAGAAGTCTGTGTAGTCATCATGGTTGAATGTGAAGATAACTaGCCCCAGCAGGGTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSSKGANVIVEVCVVIMVECEDN*PQQGYL Trigger: AAGGTAACCCTGCTGGGGTCAGTTATCTTCACATTC...AACCATGATGACTACACAGACTTCTACTATGACATTTGCTCCTTTTGAGGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435034.5 |
||
| CDS-3UTR GCA 90 bp | GTATCCTCAAAAGGAGCAAATGTCATAGTAGAAGTCTGTGTAGTCATCATGGTTGATGAAAACGGCTGCTaGCAGCCAAATAGCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSKGANVIVEVCVVIMVDENGC*QPNSIQ Trigger: TTGGATGCTATTTGGCTGGCAGCAGCCGTTTTCATC...AACCATGATGACTACACAGACTTCTACTATGACATTTGCTCCTTTTGAGGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435034.5 |
||
| CDS-3UTR GCA 90 bp | GTATCCTCAAAAGGAGCAAATGTCATAGTAGAAGTCTGTGTAGTCATCATGGTTCATGATGAAAACGGCTaGTGCCAGCCAAATAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSSKGANVIVEVCVVIMVHDENG*CQPNSI Trigger: GATGCTATTTGGCTGGCAGCAGCCGTTTTCATCATG...AACCATGATGACTACACAGACTTCTACTATGACATTTGCTCCTTTTGAGGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435034.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCACCAGCAGGGTTACCTTaGCAGGGTATGACATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKSILNTLFHLQHGMFHSPAGLP*QGMTSS Trigger: TGAAGATGTCATACCCTGCCAAGGTAACCCTGCTGG...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | AAATGTCATAGTAGAAGTCTGTGTAGTCATCATGGTTATCTGAATTACAGCCACCCAGCAGGGTTACCTTaGCAGGGTATGACATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KCHSRSLCSHHGYLNYSHPAGLP*QGMTSS Trigger: TGAAGATGTCATACCCTGCCAAGGTAACCCTGCTGG...GTGGCTGTAATTCAGATAACCATGATGACTACACAGACTTCTACTATGACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435034.5 |
||
| CDS-3UTR GCA 90 bp | CACTTCACATTGGGTAAGGAGTCTAACAATCTGCTTTGCAAATCCAAGTCAAGAATCACACTGATCTGCTaGACTGATGACATTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: HFTLGKESNNLLCKSKSRITLIC*TDDITL Trigger: CAGTGTAATGTCATCAGTGCAGCAGATCAGTGTGAT...TCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374688.5 |
||
| CDS-3UTR GCA 90 bp | AAATGTCATAGTAGAAGTCTGTGTAGTCATCATGGTTATCTGAATTACAGCCACGCCAGATGCTGGGTGTaGTGGAATGTGAAGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: KCHSRSLCSHHGYLNYSHARCWV*WNVKIT Trigger: AGTTATCTTCACATTCCAGCACACCCAGCATCTGGC...GTGGCTGTAATTCAGATAACCATGATGACTACACAGACTTCTACTATGACATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435034.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCAATGACCCAACGCCATTaGAAGGTGACTTTGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKSILNTLFHLQHGMFHSMTQRH*KVTLLH Trigger: GTGAAGCAAAGTCACCTTCCAATGGCGTTGGGTCAT...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCAACAACTCCACATATCTaGTCTCTCTCCAGCCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RKSILNTLFHLQHGMFHSTTPHI*SLSSPY Trigger: GTAAGGGCTGGAGAGAGACCAGATATGTGGAGTTGT...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR TCA 90 bp | TGTATCCTCAAAAGGAGCAAATGTCATAGTAGAAGTCTGTGTAGTCATCATGGTGTCATCATGGTTATCTaGATTACAGCCACAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CILKRSKCHSRSLCSHHGVIMVI*ITATDH Trigger: ATGATCTGTGGCTGTAATTCAGATAACCATGATGAC...ACCATGATGACTACACAGACTTCTACTATGACATTTGCTCCTTTTGAGGATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435034.5 |
||
| CDS-3UTR GCA 90 bp | CACTTCACATTGGGTAAGGAGTCTAACAATCTGCTTTGCAAATCCAAGTCAAGATATGTTAGTGTGGTTTaGAAGAAACTTCAATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFTLGKESNNLLCKSKSRYVSVV*KKLQWR Trigger: CCTCCATTGAAGTTTCTTGCAAACCACACTAACATA...TCTTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCTTACCCAATGTGAAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR CCA 90 bp | TCCTCAAAAGGAGCAAATGTCATAGTAGAAGTCTGTGTAGTCATCATGGTTATCCCATTCATCACCTTCTaGTTTCCAATCTCCTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKGANVIVEVCVVIMVIPFITF*FPISFY Trigger: GTAAAAGGAGATTGGAAACCAGAAGGTGATGAATGG...GATAACCATGATGACTACACAGACTTCTACTATGACATTTGCTCCTTTTGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435034.5 |
||
| 3UTR CAA 72 bp | AGAGTGACTAATCTGATAAACCAGTTTGATATTCATTaGGCCATGTTTTACTTGAGAGTGACAGCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVTNLINQFDIH*AMFYLRVTALR Trigger: CCTCAGTGCTGTCACTCTCAAGTAAAACATGGCCAAATGAATATCAAACTGGTTTATCAGATTAGTCACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCACTTTTTAACATTATCTaGGGCAACATCTACCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKSILNTLFHLQHGMFHSLFNII*GNIYRL Trigger: AAGCCGGTAGATGTTGCCTCAGATAATGTTAAAAAG...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCACTCAGAAGCACTTTGTaGTTTGTTCAACCATTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RKSILNTLFHLQHGMFHSLRSTL*FVQPLQ Trigger: CTGTAATGGTTGAACAAAGCACAAAGTGCTTCTGAG...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374688.5 |
||
| 3UTR CAA 72 bp | AAGAGACTACATGTGAAGAGATTTTGCCTCCAATATTaGTTACCTGAATTACAGCCACAGATCATCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KRLHVKRFCLQY*LPELQPQIISN Trigger: ATTGGAGATGATCTGTGGCTGTAATTCAGGTAACAAATATTGGAGGCAAAATCTCTTCACATGTAGTCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451560.1 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCACAACCATTACAGTCTTaGTTCAGGTCTATGTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: RKSILNTLFHLQHGMFHSQPLQS*FRSMLT Trigger: TGTTAACATAGACCTGAAGCAAGACTGTAATGGTTG...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374688.5 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCAAGGAGTCTAACAATCTaGTTTGCAAATCCAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKSILNTLFHLQHGMFHSRSLTI*FANPSQ Trigger: TTGACTTGGATTTGCAAAGCAGATTGTTAGACTCCT...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCATGCCATATGAAGTTCTaGTTTCTCTGTTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKSILNTLFHLQHGMFHSCHMKF*FLCFFL Trigger: CAAGAAGAAACAGAGAAACCAGAACTTCATATGGCA...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCAATTCACACTTCACATTaGGTAAGGAGTCTAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: RKSILNTLFHLQHGMFHSIHTSH*VRSLTI Trigger: GATTGTTAGACTCCTTACCCAATGTGAAGTGTGAAT...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCAATTCCATTTACAACATaGGATGTTCCACTCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKSILNTLFHLQHGMFHSIPFTT*DVPLNC Trigger: ACAATTGAGTGGAACATCCCATGTTGTAAATGGAAT...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCTCTACCCACAGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACACAACATCTACCGGCTTaGAGGCCAATGACCCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: WSLPTGRLPFPLKANNSTQHLPA*RPMTQR Trigger: GCGTTGGGTCATTGGCCTCAAAGCCGGTAGATGTTG...TGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCTGTGGGTAGAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTCAACATCTACCGGCTTaGAGGCCAATGACCCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: REATISTESQQLHISGLSQHLPA*RPMTQR Trigger: GCGTTGGGTCATTGGCCTCAAAGCCGGTAGATGTTG...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CAA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTTCATCTCTCTACCTTTaGGTCTCTACCCACAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LTFSVPPLISCVRQAYRPSSLYL*VSTHRE Trigger: CTCCCTGTGGGTAGAGACCAAAAGGTAGAGAGATGA...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS-3UTR CAA 90 bp | TTGACTTTCTCAGTGCCACCTCTGATTAGCTGTGTGAGGCAGGCCTATAGGCCTTCAACCATTACAGTCTaGCTTCAGGTCTATGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTFSVPPLISCVRQAYRPSTITV*LQVYVN Trigger: GTTAACATAGACCTGAAGCAAGACTGTAATGGTTGA...AGGCCTATAGGCCTGCCTCACACAGCTAATCAGAGGTGGCACTGAGAAAGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374688.5 |
||
| CDS-3UTR CAA 90 bp | TGTATCCTCAAAAGGAGCAAATGTCATAGTAGAAGTCTGTGTAGTCATCATGGTCAACATCTACCGGCTTaGAGGCCAATGACCCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: CILKRSKCHSRSLCSHHGQHLPA*RPMTQR Trigger: GCGTTGGGTCATTGGCCTCAAAGCCGGTAGATGTTG...ACCATGATGACTACACAGACTTCTACTATGACATTTGCTCCTTTTGAGGATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435034.5 |
||
| CDS GCA 90 bp | TCCAGAGATTTTGATCACATTGAGAAATCACACATCACACTGATCTaGTGCACTGATGACATTACACTGACCGGGTCTGAAGACTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SRDFDHIEKSHITLI*CTDDITLTGSEDWQ Trigger: TTGCCAGTCTTCAGACCCGGTCAGTGTAATGTCATCAGTGCAGCAGATCAGTGTGATGTGTGATTTCTCAATGTGATCAAAATCTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374688.5 |
||
| CDS-3UTR CAA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTGAAGCACTTTGTGCTTaGTTCAACCATTACAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: REATISTESQQLHISGLSEALCA*FNHYSL Trigger: AAGACTGTAATGGTTGAACAAAGCACAAAGTGCTTC...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374688.5 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCACCCAGCAGGGTTACCTaGGCAGGGTATGACATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKSILNTLFHLQHGMFHSPSRVT*AGYDIF Trigger: GAAGATGTCATACCCTGCCAAGGTAACCCTGCTGGG...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
||
| CDS GCA 90 bp | AGAGATTTTGATCACATTGAGAAATCACACATCACACTGATCTGCTaGACTGATGACATTACACTGACCGGGTCTGAAGACTGGCAAGTA | + |
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Preference number: 5 (lower is better) Translates to: RDFDHIEKSHITLIC*TDDITLTGSEDWQV Trigger: TACTTGCCAGTCTTCAGACCCGGTCAGTGTAATGTCATCAGTGCAGCAGATCAGTGTGATGTGTGATTTCTCAATGTGATCAAAATCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374688.5 |
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| CDS-3UTR CAA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTTCTATGTTAACACTCTaGCTCTCTAAAATAGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: REATISTESQQLHISGLSSMLTL*LSKIVQ Trigger: CTGGACTATTTTAGAGAGCAAGAGTGTTAACATAGA...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374688.5 |
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| CDS-3UTR CAA 90 bp | AGGGAGGCTACCATTTCCACTGAAAGCCAACAACTCCACATATCTGGTCTCTCTAATCTCAGAAGCACTTaGTGCTTTGTTCAACCATTA | + |
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Preference number: 5 (lower is better) Translates to: REATISTESQQLHISGLSNLRST*CFVQPL Trigger: TAATGGTTGAACAAAGCACAAAGTGCTTCTGAGATT...AGAGAGACCAGATATGTGGAGTTGTTGGCTTTCAGTGGAAATGGTAGCCTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374688.5 |
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| CDS-3UTR CAA 90 bp | TCCTCAAAAGGAGCAAATGTCATAGTAGAAGTCTGTGTAGTCATCATGGTTATCAATGACCCAACGCCATaGGAAGGTGACTTTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SSKGANVIVEVCVVIMVINDPTP*EGDFAS Trigger: TGAAGCAAAGTCACCTTCCAATGGCGTTGGGTCATT...GATAACCATGATGACTACACAGACTTCTACTATGACATTTGCTCCTTTTGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435034.5 |
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| CDS-3UTR CAA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCATCATCTCTCTACCTTTaGGTCTCTACCCACAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RKSILNTLFHLQHGMFHSSSLYL*VSTHRE Trigger: CTCCCTGTGGGTAGAGACCAAAAGGTAGAGAGATGA...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS-3UTR CAA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCAAATGACCCAACGCCATaGGAAGGTGACTTTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RKSILNTLFHLQHGMFHSNDPTP*EGDFAS Trigger: TGAAGCAAAGTCACCTTCCAATGGCGTTGGGTCATT...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS GCA 90 bp | AAAAATCTCAGAAGCACTTTGTGCTTTGTTCAACCATTACAGTCTTaGTTCAGGTCTATGTTAACACTCTTGCTCTCTAAAATAGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: KNLRSTLCFVQPLQS*FRSMLTLLLSKIVQ Trigger: CTGGACTATTTTAGAGAGCAAGAGTGTTAACATAGACCTGAAGCAAGACTGTAATGGTTGAACAAAGCACAAAGTGCTTCTGAGATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374688.5 |
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| CDS-3UTR CAA 90 bp | AGAAAGAGCATTCTGAACACATTATTCCATTTACAACATGGGATGTTCCACTCATATTCACACTTCACATaGGGTAAGGAGTCTAACAAT | + |
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Preference number: 5 (lower is better) Translates to: RKSILNTLFHLQHGMFHSYSHFT*GKESNN Trigger: ATTGTTAGACTCCTTACCCAATGTGAAGTGTGAATA...TGAGTGGAACATCCCATGTTGTAAATGGAATAATGTGTTCAGAATGCTCTTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374688.5 ENST00000374692.8 |
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| CDS TCA 72 bp | AGCAGCCGCGGCTACTGGTTCCCCGCGCTCGCGCGGTaGGGAGTAGGAGAGGGCACAGCCGCGGCCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: SSRGYWFPALAR*GVGEGTAAAAR Trigger: GCGGGCGGCCGCGGCTGTGCCCTCTCCTACTCCTCACCGCGCGAGCGCGGGGAACCAGTAGCCGCGGCTGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374692.8 ENST00000434214.1 |
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| CDS GCA 72 bp | GATCACATTGAGAAATCACACATCACACTGATCTGCTaGACTGATGACATTACACTGACCGGGTCTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: DHIEKSHITLIC*TDDITLTGSED Trigger: GTCTTCAGACCCGGTCAGTGTAATGTCATCAGTGCAGCAGATCAGTGTGATGTGTGATTTCTCAATGTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374688.5 |
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| CDS GCA 72 bp | TTTGATCACATTGAGAAATCACACATCACACTGATCTaGTGCACTGATGACATTACACTGACCGGGTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FDHIEKSHITLI*CTDDITLTGSE Trigger: TTCAGACCCGGTCAGTGTAATGTCATCAGTGCAGCAGATCAGTGTGATGTGTGATTTCTCAATGTGATCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374688.5 |
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| CDS CCA 72 bp | TGCAAACCAGAAAGTAGGAAGTTCAAACCCTACTCCTaGGTATCTGTCCAGTCAGGAGATAGAAAATACCAT | + |
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Preference number: 6 (lower is better) Translates to: CKPESRKFKPYS*VSVQSGDRKYH Trigger: ATGGTATTTTCTATCTCCTGACTGGACAGATACCCAGGAGTAGGGTTTGAACTTCCTACTTTCTGGTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374688.5 |
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| CDS CCA 72 bp | TGCACTGATGACATTACACTGACCGGGTCTGAAGACTaGCAAGTAGCAAGTACTTTAGTTATCTTAATAAGA | + |
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Preference number: 6 (lower is better) Translates to: CTDDITLTGSED*QVASTLVILIR Trigger: TCTTATTAAGATAACTAAAGTACTTGCTACTTGCCAGTCTTCAGACCCGGTCAGTGTAATGTCATCAGTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374688.5 |
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| CDS CCA 72 bp | ATCACAGAGTTCAGTTCCAGAAAGCAGTTACTACTCTaGGGGAACAATAGGCTGAAATTATTAAAATTTAGA | + |
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Preference number: 6 (lower is better) Translates to: ITEFSSRKQLLL*GNNRLKLLKFR Trigger: TCTAAATTTTAATAATTTCAGCCTATTGTTCCCCCAGAGTAGTAACTGCTTTCTGGAACTGAACTCTGTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374688.5 |
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